Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93059.t1 | XP_013446222.1 | 96.9 | 319 | 10 | 0 | 1 | 319 | 1 | 319 | 3.80E-183 | 650.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93059.t1 | Q0PGJ6 | 75.7 | 321 | 70 | 3 | 1 | 319 | 1 | 315 | 8.1e-142 | 504.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93059.t1 | A0A072TRV0 | 96.9 | 319 | 10 | 0 | 1 | 319 | 1 | 319 | 2.7e-183 | 650.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene93059 | 0.806049 | 9.93E-50 | -1.69E-46 |
| MS.gene049171 | MS.gene93059 | 0.804473 | 2.12E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene93059 | 0.831079 | 2.05E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene93059 | 0.850326 | 1.83E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene93059 | 0.837907 | 3.94E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene93059 | 0.846828 | 1.70E-59 | -1.69E-46 |
| MS.gene049369 | MS.gene93059 | 0.813924 | 2.00E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene93059 | 0.82178 | 3.37E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene93059 | 0.805238 | 1.47E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene93059 | 0.830912 | 2.25E-55 | -1.69E-46 |
| MS.gene05010 | MS.gene93059 | 0.806532 | 7.86E-50 | -1.69E-46 |
| MS.gene050163 | MS.gene93059 | 0.806465 | 8.12E-50 | -1.69E-46 |
| MS.gene050165 | MS.gene93059 | 0.810665 | 1.03E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene93059 | 0.821882 | 3.19E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene93059 | 0.829675 | 4.51E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene93059 | 0.839877 | 1.22E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene93059 | 0.820286 | 7.43E-53 | -1.69E-46 |
| MS.gene050518 | MS.gene93059 | 0.800243 | 1.58E-48 | -1.69E-46 |
| MS.gene050538 | MS.gene93059 | 0.827566 | 1.46E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene93059 | 0.824541 | 7.63E-54 | -1.69E-46 |
| MS.gene050747 | MS.gene93059 | 0.814601 | 1.42E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene93059 | 0.848671 | 5.28E-60 | -1.69E-46 |
| MS.gene05080 | MS.gene93059 | 0.819748 | 9.87E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene93059 | 0.828613 | 8.16E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene93059 | 0.825823 | 3.80E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene93059 | 0.80471 | 1.90E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene93059 | 0.803354 | 3.63E-49 | -1.69E-46 |
| MS.gene051167 | MS.gene93059 | -0.80392 | 2.77E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene93059 | 0.844098 | 9.33E-59 | -1.69E-46 |
| MS.gene051317 | MS.gene93059 | 0.801578 | 8.43E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene93059 | 0.836253 | 1.04E-56 | -1.69E-46 |
| MS.gene051692 | MS.gene93059 | 0.8152 | 1.04E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene93059 | 0.807826 | 4.18E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene93059 | 0.817407 | 3.35E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene93059 | 0.840475 | 8.50E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene93059 | 0.814581 | 1.43E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene93059 | 0.802502 | 5.44E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene93059 | 0.835111 | 2.03E-56 | -1.69E-46 |
| MS.gene052379 | MS.gene93059 | 0.81942 | 1.17E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene93059 | 0.806816 | 6.85E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene93059 | 0.803552 | 3.30E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene93059 | 0.807374 | 5.21E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene93059 | 0.814709 | 1.34E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene93059 | 0.801863 | 7.37E-49 | -1.69E-46 |
| MS.gene052825 | MS.gene93059 | 0.803286 | 3.75E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene93059 | 0.825697 | 4.07E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene93059 | 0.829727 | 4.38E-55 | -1.69E-46 |
| MS.gene052916 | MS.gene93059 | 0.812553 | 4.00E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene93059 | 0.809262 | 2.06E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene93059 | 0.826381 | 2.80E-54 | -1.69E-46 |
| MS.gene053117 | MS.gene93059 | 0.80472 | 1.89E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene93059 | 0.80078 | 1.23E-48 | -1.69E-46 |
| MS.gene053207 | MS.gene93059 | 0.83792 | 3.91E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene93059 | 0.823373 | 1.43E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene93059 | 0.820407 | 6.97E-53 | -1.69E-46 |
| MS.gene053449 | MS.gene93059 | 0.800305 | 1.53E-48 | -1.69E-46 |
| MS.gene053480 | MS.gene93059 | 0.800454 | 1.43E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene93059 | 0.805206 | 1.49E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene93059 | 0.855947 | 4.48E-62 | -1.69E-46 |
| MS.gene053824 | MS.gene93059 | 0.841192 | 5.52E-58 | -1.69E-46 |
| MS.gene053916 | MS.gene93059 | 0.881866 | 1.68E-70 | -1.69E-46 |
| MS.gene054595 | MS.gene93059 | 0.813849 | 2.08E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene93059 | 0.832593 | 8.65E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene93059 | 0.854086 | 1.56E-61 | -1.69E-46 |
| MS.gene054706 | MS.gene93059 | -0.820642 | 6.16E-53 | -1.69E-46 |
| MS.gene05494 | MS.gene93059 | 0.83797 | 3.80E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene93059 | 0.815131 | 1.08E-51 | -1.69E-46 |
| MS.gene05505 | MS.gene93059 | 0.842629 | 2.30E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene93059 | 0.827832 | 1.26E-54 | -1.69E-46 |
| MS.gene055212 | MS.gene93059 | 0.818754 | 1.66E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene93059 | 0.809505 | 1.83E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene93059 | 0.820661 | 6.10E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene93059 | 0.833389 | 5.49E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene93059 | 0.823688 | 1.21E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene93059 | 0.856012 | 4.29E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene93059 | 0.81214 | 4.93E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene93059 | 0.813597 | 2.36E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene93059 | 0.808639 | 2.81E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene93059 | 0.816684 | 4.87E-52 | -1.69E-46 |
| MS.gene05592 | MS.gene93059 | 0.822064 | 2.89E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene93059 | 0.840966 | 6.32E-58 | -1.69E-46 |
| MS.gene056374 | MS.gene93059 | 0.823928 | 1.06E-53 | -1.69E-46 |
| MS.gene056387 | MS.gene93059 | 0.815085 | 1.11E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene93059 | 0.921965 | 1.82E-88 | -1.69E-46 |
| MS.gene056504 | MS.gene93059 | 0.83137 | 1.74E-55 | -1.69E-46 |
| MS.gene05664 | MS.gene93059 | 0.805462 | 1.32E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene93059 | 0.856122 | 3.98E-62 | -1.69E-46 |
| MS.gene05666 | MS.gene93059 | 0.810165 | 1.32E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene93059 | 0.810071 | 1.38E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene93059 | 0.802709 | 4.93E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene93059 | 0.814677 | 1.36E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene93059 | 0.816916 | 4.32E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene93059 | 0.813233 | 2.84E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene93059 | 0.819053 | 1.42E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene93059 | 0.805211 | 1.49E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene93059 | 0.815714 | 8.02E-52 | -1.69E-46 |
| MS.gene057857 | MS.gene93059 | 0.806327 | 8.68E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene93059 | 0.886138 | 4.44E-72 | -1.69E-46 |
| MS.gene058323 | MS.gene93059 | 0.801427 | 9.05E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene93059 | 0.836051 | 1.17E-56 | -1.69E-46 |
| MS.gene058723 | MS.gene93059 | 0.844423 | 7.63E-59 | -1.69E-46 |
| MS.gene058773 | MS.gene93059 | 0.829389 | 5.29E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene93059 | 0.841401 | 4.86E-58 | -1.69E-46 |
| MS.gene059022 | MS.gene93059 | 0.813836 | 2.09E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene93059 | 0.812612 | 3.88E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene93059 | 0.830058 | 3.64E-55 | -1.69E-46 |
| MS.gene059305 | MS.gene93059 | 0.800173 | 1.63E-48 | -1.69E-46 |
| MS.gene05934 | MS.gene93059 | 0.838731 | 2.42E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene93059 | 0.832407 | 9.62E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene93059 | 0.834307 | 3.23E-56 | -1.69E-46 |
| MS.gene059699 | MS.gene93059 | -0.818156 | 2.27E-52 | -1.69E-46 |
| MS.gene059718 | MS.gene93059 | 0.852185 | 5.45E-61 | -1.69E-46 |
| MS.gene059865 | MS.gene93059 | 0.818601 | 1.80E-52 | -1.69E-46 |
| MS.gene059902 | MS.gene93059 | 0.810913 | 9.10E-51 | -1.69E-46 |
| MS.gene060193 | MS.gene93059 | 0.802832 | 4.65E-49 | -1.69E-46 |
| MS.gene060341 | MS.gene93059 | 0.806755 | 7.05E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene93059 | 0.813737 | 2.20E-51 | -1.69E-46 |
| MS.gene060728 | MS.gene93059 | 0.824456 | 8.00E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene93059 | 0.850571 | 1.56E-60 | -1.69E-46 |
| MS.gene060804 | MS.gene93059 | 0.838552 | 2.69E-57 | -1.69E-46 |
| MS.gene060818 | MS.gene93059 | 0.819061 | 1.42E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene93059 | 0.832353 | 9.92E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene93059 | 0.820595 | 6.31E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene93059 | 0.812501 | 4.11E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene93059 | 0.854239 | 1.40E-61 | -1.69E-46 |
| MS.gene061150 | MS.gene93059 | 0.803266 | 3.78E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93059.t1 | MTR_8g070095 | 96.865 | 319 | 10 | 0 | 1 | 319 | 1 | 319 | 0.0 | 638 |
| MS.gene93059.t1 | MTR_8g070115 | 82.243 | 321 | 49 | 3 | 1 | 319 | 1 | 315 | 0.0 | 532 |
| MS.gene93059.t1 | MTR_4g021350 | 71.473 | 319 | 85 | 3 | 1 | 319 | 1 | 313 | 3.15e-160 | 449 |
| MS.gene93059.t1 | MTR_4g021350 | 72.509 | 291 | 74 | 3 | 1 | 291 | 1 | 285 | 3.26e-144 | 408 |
| MS.gene93059.t1 | MTR_4g021450 | 64.669 | 317 | 97 | 3 | 2 | 318 | 3 | 304 | 7.18e-141 | 400 |
| MS.gene93059.t1 | MTR_4g021410 | 64.669 | 317 | 97 | 3 | 2 | 318 | 3 | 304 | 8.37e-141 | 400 |
| MS.gene93059.t1 | MTR_7g063580 | 63.810 | 315 | 107 | 3 | 6 | 319 | 46 | 354 | 5.73e-137 | 392 |
| MS.gene93059.t1 | MTR_4g021410 | 65.108 | 278 | 84 | 2 | 41 | 318 | 3 | 267 | 2.31e-123 | 354 |
| MS.gene93059.t1 | MTR_4g021410 | 63.900 | 241 | 74 | 2 | 78 | 318 | 1 | 228 | 4.79e-101 | 296 |
| MS.gene93059.t1 | MTR_4g021450 | 63.071 | 241 | 76 | 2 | 78 | 318 | 1 | 228 | 1.68e-99 | 292 |
| MS.gene93059.t1 | MTR_4g072320 | 46.965 | 313 | 155 | 5 | 10 | 319 | 11 | 315 | 1.88e-91 | 275 |
| MS.gene93059.t1 | MTR_4g072350 | 46.645 | 313 | 160 | 5 | 10 | 318 | 11 | 320 | 8.58e-88 | 266 |
| MS.gene93059.t1 | MTR_4g072360 | 45.048 | 313 | 165 | 5 | 10 | 318 | 11 | 320 | 6.12e-86 | 261 |
| MS.gene93059.t1 | MTR_4g036845 | 41.587 | 315 | 172 | 4 | 10 | 319 | 8 | 315 | 8.00e-86 | 261 |
| MS.gene93059.t1 | MTR_4g021450 | 65.385 | 182 | 61 | 1 | 137 | 318 | 6 | 185 | 9.60e-85 | 253 |
| MS.gene93059.t1 | MTR_7g070500 | 44.586 | 314 | 163 | 7 | 8 | 318 | 15 | 320 | 1.33e-79 | 245 |
| MS.gene93059.t1 | MTR_6g073110 | 40.439 | 319 | 183 | 5 | 2 | 316 | 3 | 318 | 1.73e-79 | 244 |
| MS.gene93059.t1 | MTR_0374s0050 | 39.806 | 309 | 171 | 5 | 14 | 318 | 18 | 315 | 3.95e-75 | 233 |
| MS.gene93059.t1 | MTR_3g083130 | 40.196 | 306 | 171 | 4 | 15 | 318 | 20 | 315 | 5.87e-72 | 225 |
| MS.gene93059.t1 | MTR_7g070500 | 44.876 | 283 | 147 | 5 | 8 | 289 | 15 | 289 | 7.40e-71 | 222 |
| MS.gene93059.t1 | MTR_4g072060 | 41.096 | 292 | 158 | 5 | 10 | 291 | 5 | 292 | 3.46e-67 | 213 |
| MS.gene93059.t1 | MTR_5g097900 | 42.606 | 284 | 160 | 2 | 15 | 297 | 19 | 300 | 7.74e-66 | 209 |
| MS.gene93059.t1 | MTR_5g097910 | 42.606 | 284 | 160 | 2 | 15 | 297 | 19 | 300 | 9.92e-66 | 209 |
| MS.gene93059.t1 | MTR_5g097940 | 42.606 | 284 | 160 | 2 | 15 | 297 | 19 | 300 | 9.92e-66 | 209 |
| MS.gene93059.t1 | MTR_6g072650 | 40.667 | 150 | 64 | 3 | 171 | 318 | 10 | 136 | 6.43e-31 | 114 |
| MS.gene93059.t1 | MTR_6g072710 | 40.708 | 113 | 65 | 1 | 189 | 299 | 1 | 113 | 4.60e-24 | 95.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93059.t1 | AT2G37770 | 75.701 | 321 | 70 | 3 | 1 | 319 | 1 | 315 | 1.95e-178 | 496 |
| MS.gene93059.t1 | AT2G37790 | 73.832 | 321 | 75 | 4 | 1 | 319 | 1 | 314 | 6.77e-172 | 479 |
| MS.gene93059.t1 | AT3G53880 | 68.536 | 321 | 93 | 4 | 1 | 319 | 1 | 315 | 4.27e-154 | 434 |
| MS.gene93059.t1 | AT2G37760 | 65.421 | 321 | 99 | 3 | 1 | 319 | 1 | 311 | 1.21e-151 | 428 |
| MS.gene93059.t1 | AT2G37760 | 65.421 | 321 | 99 | 3 | 1 | 319 | 1 | 311 | 1.21e-151 | 428 |
| MS.gene93059.t1 | AT2G37760 | 66.667 | 297 | 87 | 3 | 1 | 295 | 1 | 287 | 7.35e-141 | 400 |
| MS.gene93059.t1 | AT2G37760 | 66.667 | 297 | 87 | 3 | 1 | 295 | 1 | 287 | 7.35e-141 | 400 |
| MS.gene93059.t1 | AT2G37760 | 67.119 | 295 | 85 | 3 | 1 | 293 | 1 | 285 | 8.87e-141 | 399 |
| MS.gene93059.t1 | AT3G53880 | 68.367 | 294 | 85 | 4 | 1 | 292 | 1 | 288 | 1.58e-138 | 395 |
| MS.gene93059.t1 | AT2G37760 | 66.667 | 264 | 82 | 2 | 58 | 319 | 6 | 265 | 1.29e-124 | 357 |
| MS.gene93059.t1 | AT2G37760 | 66.667 | 264 | 82 | 2 | 58 | 319 | 6 | 265 | 1.29e-124 | 357 |
| MS.gene93059.t1 | AT2G37770 | 74.286 | 210 | 48 | 2 | 1 | 210 | 1 | 204 | 6.40e-110 | 321 |
| MS.gene93059.t1 | AT5G01670 | 45.141 | 319 | 164 | 7 | 3 | 318 | 11 | 321 | 2.26e-90 | 273 |
| MS.gene93059.t1 | AT5G62420 | 42.902 | 317 | 166 | 5 | 10 | 319 | 8 | 316 | 6.11e-86 | 261 |
| MS.gene93059.t1 | AT5G01670 | 41.618 | 346 | 164 | 8 | 3 | 318 | 11 | 348 | 1.25e-84 | 259 |
| MS.gene93059.t1 | AT2G21250 | 40.753 | 292 | 159 | 5 | 10 | 291 | 5 | 292 | 1.24e-73 | 229 |
| MS.gene93059.t1 | AT2G21260 | 39.384 | 292 | 163 | 5 | 10 | 291 | 5 | 292 | 5.37e-72 | 225 |
| MS.gene93059.t1 | AT1G59960 | 39.677 | 310 | 177 | 8 | 16 | 319 | 21 | 326 | 4.54e-70 | 221 |
| MS.gene93059.t1 | AT1G59950 | 40.968 | 310 | 173 | 8 | 16 | 319 | 15 | 320 | 1.22e-66 | 212 |
| MS.gene93059.t1 | AT2G21250 | 40.948 | 232 | 123 | 5 | 10 | 231 | 5 | 232 | 1.60e-55 | 181 |
| MS.gene93059.t1 | AT2G21260 | 36.073 | 219 | 128 | 4 | 83 | 291 | 8 | 224 | 8.53e-45 | 153 |
| MS.gene93059.t1 | AT1G06690 | 25.519 | 337 | 172 | 16 | 15 | 299 | 57 | 366 | 8.33e-15 | 74.7 |
Find 97 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTAGGGTTATTCACCTT+TGG | 0.283109 | 8.2:+32708733 | MS.gene93059:intron |
| ATCGATTGTGCTCAATTATA+TGG | 0.285319 | 8.2:+32706703 | MS.gene93059:CDS |
| GTTTAGGGTTATTCACCTTT+GGG | 0.309851 | 8.2:+32708734 | MS.gene93059:intron |
| AAGTGGAATGCCATCCTTCC+TGG | 0.316899 | 8.2:+32708535 | MS.gene93059:CDS |
| CTTCCGTCGGCTTGGGAACT+TGG | 0.318119 | 8.2:+32706526 | MS.gene93059:CDS |
| TTAGGTTGCAAAAGATCTTC+AGG | 0.331295 | 8.2:-32708378 | None:intergenic |
| AATGCTATTGGTACATCTTC+TGG | 0.332221 | 8.2:-32707006 | None:intergenic |
| TGCTCAGGTAGCTCTTCGTT+GGG | 0.340720 | 8.2:+32708835 | MS.gene93059:CDS |
| CATTTAGAATTGGATGCTTA+AGG | 0.343408 | 8.2:-32708784 | None:intergenic |
| CAGATCTCTTGAAGAACTTT+GGG | 0.345354 | 8.2:+32709257 | MS.gene93059:CDS |
| GCCGTGAATTCGGCGCCTAT+TGG | 0.350788 | 8.2:-32708351 | None:intergenic |
| TTCCATGTGCTGGCTAAGTT+AGG | 0.363519 | 8.2:-32708396 | None:intergenic |
| ACAGATCTCTTGAAGAACTT+TGG | 0.367507 | 8.2:+32709256 | MS.gene93059:CDS |
| GGTCCTTTCTTTATCGCAAC+TGG | 0.368778 | 8.2:-32708330 | None:intergenic |
| TCAGCAACCTCATTTAGAAT+TGG | 0.373514 | 8.2:-32708794 | None:intergenic |
| AATTTAGCAAACAGGTCTTC+AGG | 0.375181 | 8.2:-32708944 | None:intergenic |
| ATAATGAAAATTTACCTTGA+TGG | 0.383153 | 8.2:-32706595 | None:intergenic |
| TGGCAAGCCGAGGACGATCC+TGG | 0.383508 | 8.2:+32706546 | MS.gene93059:CDS |
| CTCTTGCTTGCAGATTGGCT+TGG | 0.397628 | 8.2:+32706814 | MS.gene93059:intron |
| CACCTTTGGGCTCCCCAACC+TGG | 0.398492 | 8.2:+32708747 | MS.gene93059:CDS |
| TCTTCGTTGGGGATTACAAA+TGG | 0.402510 | 8.2:+32708847 | MS.gene93059:CDS |
| TTCAGGCTTAGCCGTGAATT+CGG | 0.403381 | 8.2:-32708361 | None:intergenic |
| TCTCAGAAAATTTAGCAAAC+AGG | 0.415438 | 8.2:-32708952 | None:intergenic |
| TAGTGAAGCGCGAAGATTTG+TGG | 0.419049 | 8.2:+32706864 | MS.gene93059:CDS |
| AAGATCCCTTCCGTCGGCTT+GGG | 0.419341 | 8.2:+32706519 | MS.gene93059:CDS |
| TTCCATTGCCTTCCATGTGC+TGG | 0.421435 | 8.2:-32708406 | None:intergenic |
| TACAGAGAAGTGGACACCTT+TGG | 0.421647 | 8.2:-32708589 | None:intergenic |
| CAATTTCTCTATCAAGAAGT+TGG | 0.424383 | 8.2:+32708470 | MS.gene93059:CDS |
| ATCGAAGAATTGAATTGCCT+TGG | 0.425062 | 8.2:-32706481 | None:intergenic |
| CAAGCCGACGGAAGGGATCT+TGG | 0.426447 | 8.2:-32706517 | None:intergenic |
| CATCAGTATGAAGCCAGGTT+GGG | 0.428095 | 8.2:-32708760 | None:intergenic |
| AATAGCATTGGAAAAGACTT+TGG | 0.440171 | 8.2:+32707020 | MS.gene93059:CDS |
| TCTGGGAAGGCAAAGGCTAT+AGG | 0.442354 | 8.2:+32708441 | MS.gene93059:CDS |
| CTGCTCAGGTAGCTCTTCGT+TGG | 0.446657 | 8.2:+32708834 | MS.gene93059:CDS |
| ACCAATAGGCGCCGAATTCA+CGG | 0.452350 | 8.2:+32708350 | MS.gene93059:CDS |
| ATGGAAGCATTGTATGACTC+TGG | 0.453560 | 8.2:+32708423 | MS.gene93059:CDS |
| ACGGCTTCAGCAACGAGGCC+AGG | 0.464853 | 8.2:-32706564 | None:intergenic |
| CAAGATCCCTTCCGTCGGCT+TGG | 0.468615 | 8.2:+32706518 | MS.gene93059:CDS |
| AATTTCTCTATCAAGAAGTT+GGG | 0.469634 | 8.2:+32708471 | MS.gene93059:CDS |
| GCGATAAAGAAAGGACCAAT+AGG | 0.481557 | 8.2:+32708336 | MS.gene93059:CDS |
| AAGAGATCTGTAGGCACCAT+AGG | 0.482007 | 8.2:-32709244 | None:intergenic |
| TAAGCATCCAATTCTAAATG+AGG | 0.488314 | 8.2:+32708787 | MS.gene93059:CDS |
| ATGCCATCCTTCCTGGAGGC+AGG | 0.488471 | 8.2:+32708542 | MS.gene93059:CDS |
| CTTCGTTGGGGATTACAAAT+GGG | 0.488873 | 8.2:+32708848 | MS.gene93059:CDS |
| GACGGAAGGGATCTTGGCTC+CGG | 0.493320 | 8.2:-32706511 | None:intergenic |
| CAACGAAGAGCTACCTGAGC+AGG | 0.497875 | 8.2:-32708833 | None:intergenic |
| TACCTTGATGGCGGTAGCAA+CGG | 0.508389 | 8.2:-32706583 | None:intergenic |
| GCGGAGTTTGTCCTGCCTCC+AGG | 0.509330 | 8.2:-32708553 | None:intergenic |
| AATGAGGTTGCTGAGAAACT+AGG | 0.517463 | 8.2:+32708803 | MS.gene93059:CDS |
| ACTAGGCAAGTCTCCTGCTC+AGG | 0.519051 | 8.2:+32708820 | MS.gene93059:CDS |
| AGAAGATGTACCAATAGCAT+TGG | 0.519523 | 8.2:+32707008 | MS.gene93059:CDS |
| ACATCAGTATGAAGCCAGGT+TGG | 0.521356 | 8.2:-32708761 | None:intergenic |
| ATCAGTATGAAGCCAGGTTG+GGG | 0.529291 | 8.2:-32708759 | None:intergenic |
| CGCGATTTCTGCAATTCCAA+AGG | 0.530051 | 8.2:+32708573 | MS.gene93059:CDS |
| ACAAATCAACGTAATCAAGC+TGG | 0.534843 | 8.2:-32707050 | None:intergenic |
| TCCTCCTGCTGTCAATCAAG+TGG | 0.537498 | 8.2:+32708518 | MS.gene93059:CDS |
| TGTGGATTACTTCTAAACTC+TGG | 0.541079 | 8.2:+32706882 | MS.gene93059:CDS |
| CATTCCACTTGATTGACAGC+AGG | 0.544893 | 8.2:-32708522 | None:intergenic |
| TGGCCAGTTGCGATAAAGAA+AGG | 0.545205 | 8.2:+32708327 | MS.gene93059:CDS |
| CAAGTTCCCAAGCCGACGGA+AGG | 0.545920 | 8.2:-32706525 | None:intergenic |
| AACGAGGCCAGGATCGTCCT+CGG | 0.548937 | 8.2:-32706553 | None:intergenic |
| TGTCCTGCCTCCAGGAAGGA+TGG | 0.550318 | 8.2:-32708545 | None:intergenic |
| TCTTTATCGCAACTGGCCAG+TGG | 0.553959 | 8.2:-32708323 | None:intergenic |
| TTGAAGAAGCTGTTCGATGA+GGG | 0.555129 | 8.2:+32706839 | MS.gene93059:CDS |
| GTTACAGGCAAGATTACTGA+AGG | 0.557541 | 8.2:+32709200 | MS.gene93059:intron |
| ATATTTGTTCATGAAACCTA+TGG | 0.561345 | 8.2:+32709228 | MS.gene93059:CDS |
| CTTGGAAACTTACAGAGAAG+TGG | 0.563953 | 8.2:-32708599 | None:intergenic |
| AAGTTCTTCAAGAGATCTGT+AGG | 0.572206 | 8.2:-32709253 | None:intergenic |
| TGGAAGCATTGTATGACTCT+GGG | 0.574136 | 8.2:+32708424 | MS.gene93059:CDS |
| AGCCGTTGCTACCGCCATCA+AGG | 0.579549 | 8.2:+32706581 | MS.gene93059:CDS |
| CTTGGGAACTTGGCAAGCCG+AGG | 0.587905 | 8.2:+32706536 | MS.gene93059:CDS |
| TAACTTAGCCAGCACATGGA+AGG | 0.589109 | 8.2:+32708398 | MS.gene93059:CDS |
| TCCACTTGATTGACAGCAGG+AGG | 0.589599 | 8.2:-32708519 | None:intergenic |
| AAGGACATCAGTATGAAGCC+AGG | 0.592213 | 8.2:-32708765 | None:intergenic |
| TCTCTTGAAGAACTTTGGGA+TGG | 0.592262 | 8.2:+32709261 | MS.gene93059:CDS |
| GTATGACTCTGGGAAGGCAA+AGG | 0.592503 | 8.2:+32708434 | MS.gene93059:CDS |
| CAATTCTTCGATCTCAACAC+CGG | 0.596191 | 8.2:+32706492 | MS.gene93059:CDS |
| AAGTTCCCAAGCCGACGGAA+GGG | 0.599376 | 8.2:-32706524 | None:intergenic |
| AACTTGCTTGACAATGTCCA+AGG | 0.603582 | 8.2:+32706464 | None:intergenic |
| ATGAAAATTTACCTTGATGG+CGG | 0.606141 | 8.2:-32706592 | None:intergenic |
| AGCCAGCACATGGAAGGCAA+TGG | 0.615743 | 8.2:+32708404 | MS.gene93059:CDS |
| AGTTTGTCCTGCCTCCAGGA+AGG | 0.624277 | 8.2:-32708549 | None:intergenic |
| TCAATTATATGGCAATCAGA+AGG | 0.624823 | 8.2:+32706714 | MS.gene93059:CDS |
| GCTCAGGTAGCTCTTCGTTG+GGG | 0.625808 | 8.2:+32708836 | MS.gene93059:CDS |
| CTTTGGAATTGCAGAAATCG+CGG | 0.626868 | 8.2:-32708572 | None:intergenic |
| ATTGAGCACAATCGATGTGA+CGG | 0.630905 | 8.2:-32706696 | None:intergenic |
| TTGCCAAGTTCCCAAGCCGA+CGG | 0.633068 | 8.2:-32706529 | None:intergenic |
| GGAGCCAAGATCCCTTCCGT+CGG | 0.642083 | 8.2:+32706513 | MS.gene93059:CDS |
| AACCTAACTTAGCCAGCACA+TGG | 0.642937 | 8.2:+32708394 | MS.gene93059:CDS |
| AGCCAGGTTGGGGAGCCCAA+AGG | 0.650642 | 8.2:-32708749 | None:intergenic |
| ATTATATGGCAATCAGAAGG+AGG | 0.657917 | 8.2:+32706717 | MS.gene93059:CDS |
| AGCATTGTATGACTCTGGGA+AGG | 0.662623 | 8.2:+32708428 | MS.gene93059:CDS |
| GTTGAAGAAGCTGTTCGATG+AGG | 0.666380 | 8.2:+32706838 | MS.gene93059:CDS |
| TTACAGGCAAGATTACTGAA+GGG | 0.677089 | 8.2:+32709201 | MS.gene93059:intron |
| GAAGTTGGGAGATTTGCTCG+AGG | 0.688084 | 8.2:+32708485 | MS.gene93059:CDS |
| TAGCAACGGCTTCAGCAACG+AGG | 0.714364 | 8.2:-32706569 | None:intergenic |
| TGGAATGCCATCCTTCCTGG+AGG | 0.726179 | 8.2:+32708538 | MS.gene93059:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAAAAAAAAAAAGTG+TGG | - | chr8.2:32707377-32707396 | None:intergenic | 10.0% |
| !!! | ATAGGTTTTTTTTTTTTTAA+TGG | - | chr8.2:32709116-32709135 | None:intergenic | 10.0% |
| !!! | ATTATTTTATGTAATGTTTA+GGG | + | chr8.2:32708719-32708738 | MS.gene93059:intron | 10.0% |
| !!! | TTAAAAAAAAAAAAAAGTGT+GGG | - | chr8.2:32707376-32707395 | None:intergenic | 10.0% |
| !!! | TTAAAATAATAGTTTTATCT+AGG | - | chr8.2:32708195-32708214 | None:intergenic | 10.0% |
| !! | TGTCCAAATAATAATTATTT+GGG | + | chr8.2:32707603-32707622 | MS.gene93059:intron | 15.0% |
| !!! | ATATTTTATTTGATACATAC+AGG | + | chr8.2:32706666-32706685 | MS.gene93059:intron | 15.0% |
| !!! | CATTATTTTATGTAATGTTT+AGG | + | chr8.2:32708718-32708737 | MS.gene93059:intron | 15.0% |
| !! | AAACCCAAACAAAAATATTT+GGG | + | chr8.2:32707476-32707495 | MS.gene93059:intron | 20.0% |
| !! | AACCCCAAATAATTATTATT+TGG | - | chr8.2:32707609-32707628 | None:intergenic | 20.0% |
| !! | AATATACATACAATATGTGA+AGG | + | chr8.2:32706771-32706790 | MS.gene93059:intron | 20.0% |
| !! | ACTTATGCTACTATATAATT+TGG | + | chr8.2:32707401-32707420 | MS.gene93059:intron | 20.0% |
| !! | ATAATGAAAATTTACCTTGA+TGG | - | chr8.2:32706598-32706617 | None:intergenic | 20.0% |
| !! | CATATAAAATGACTAGAAAT+AGG | - | chr8.2:32709022-32709041 | None:intergenic | 20.0% |
| !! | GCAAAAATATAATGACTTAT+TGG | - | chr8.2:32708699-32708718 | None:intergenic | 20.0% |
| !! | GTCCAAATAATAATTATTTG+GGG | + | chr8.2:32707604-32707623 | MS.gene93059:intron | 20.0% |
| !! | GTGTCCAAATAATAATTATT+TGG | + | chr8.2:32707602-32707621 | MS.gene93059:intron | 20.0% |
| !! | TATGAAGCTATAAAAATCTA+GGG | + | chr8.2:32709042-32709061 | MS.gene93059:intron | 20.0% |
| !!! | AAAACTTTGATGTTTTTGAT+TGG | + | chr8.2:32708915-32708934 | MS.gene93059:CDS | 20.0% |
| !!! | AACAGGTATATAGTATTTTA+TGG | + | chr8.2:32708978-32708997 | MS.gene93059:intron | 20.0% |
| !!! | AACTAACTTTAATTTTGAAG+TGG | - | chr8.2:32708000-32708019 | None:intergenic | 20.0% |
| !!! | CTATAAACTAAAGTGTTTAA+GGG | - | chr8.2:32707687-32707706 | None:intergenic | 20.0% |
| ! | AAGAAGAACTTCAACAATAT+AGG | - | chr8.2:32709134-32709153 | None:intergenic | 25.0% |
| ! | AATTTCTCTATCAAGAAGTT+GGG | + | chr8.2:32708471-32708490 | MS.gene93059:CDS | 25.0% |
| ! | ACTAGACTATAAAATACTTG+TGG | - | chr8.2:32707315-32707334 | None:intergenic | 25.0% |
| ! | AGTTAAGGATTGAGAAATTT+GGG | - | chr8.2:32707834-32707853 | None:intergenic | 25.0% |
| ! | ATATATTTCCAAAACTCAAG+TGG | - | chr8.2:32706622-32706641 | None:intergenic | 25.0% |
| ! | ATATTTGTTCATGAAACCTA+TGG | + | chr8.2:32709228-32709247 | MS.gene93059:CDS | 25.0% |
| ! | CAAACCCAAACAAAAATATT+TGG | + | chr8.2:32707475-32707494 | MS.gene93059:intron | 25.0% |
| ! | GTATGAAGCTATAAAAATCT+AGG | + | chr8.2:32709041-32709060 | MS.gene93059:intron | 25.0% |
| ! | TAAAAGAAATTTACATGCGA+AGG | + | chr8.2:32708064-32708083 | MS.gene93059:intron | 25.0% |
| ! | TAGTTAAGGATTGAGAAATT+TGG | - | chr8.2:32707835-32707854 | None:intergenic | 25.0% |
| ! | TCGATTAAATAAATCCTACA+TGG | - | chr8.2:32708255-32708274 | None:intergenic | 25.0% |
| !! | ACTTTTCTTACATAGCAATA+TGG | + | chr8.2:32707253-32707272 | MS.gene93059:intron | 25.0% |
| !! | AGAAATTGAGATTCTAGTTA+AGG | - | chr8.2:32707849-32707868 | None:intergenic | 25.0% |
| !! | CCTATAAACTAAAGTGTTTA+AGG | - | chr8.2:32707688-32707707 | None:intergenic | 25.0% |
| !! | CCTTAAACACTTTAGTTTAT+AGG | + | chr8.2:32707685-32707704 | MS.gene93059:intron | 25.0% |
| !! | TGAAAAAGAAAGTGAGATTT+TGG | + | chr8.2:32707740-32707759 | MS.gene93059:intron | 25.0% |
| !!! | AATATTTTTGTTTGGGTTTG+TGG | - | chr8.2:32707475-32707494 | None:intergenic | 25.0% |
| !!! | ATAATAGTTTTATCTAGGCT+AGG | - | chr8.2:32708190-32708209 | None:intergenic | 25.0% |
| !!! | ATTGTCTAGTTTTATGACAA+TGG | + | chr8.2:32709169-32709188 | MS.gene93059:intron | 25.0% |
| !!! | TAAATTTTCTGAGATTGAAC+AGG | + | chr8.2:32708961-32708980 | MS.gene93059:CDS | 25.0% |
| ATCGATTGTGCTCAATTATA+TGG | + | chr8.2:32706703-32706722 | MS.gene93059:CDS | 30.0% | |
| ATGAAAATTTACCTTGATGG+CGG | - | chr8.2:32706595-32706614 | None:intergenic | 30.0% | |
| CAACAAAAATGCAACATATG+AGG | - | chr8.2:32707931-32707950 | None:intergenic | 30.0% | |
| CAATTTCTCTATCAAGAAGT+TGG | + | chr8.2:32708470-32708489 | MS.gene93059:CDS | 30.0% | |
| GAAGTTCTTCTTTACTTTCA+TGG | + | chr8.2:32709142-32709161 | MS.gene93059:intron | 30.0% | |
| TAAGCATCCAATTCTAAATG+AGG | + | chr8.2:32708787-32708806 | MS.gene93059:CDS | 30.0% | |
| TACATACTCAATTTAACCGA+TGG | + | chr8.2:32708284-32708303 | MS.gene93059:intron | 30.0% | |
| TCAATTATATGGCAATCAGA+AGG | + | chr8.2:32706714-32706733 | MS.gene93059:CDS | 30.0% | |
| TCTCAGAAAATTTAGCAAAC+AGG | - | chr8.2:32708955-32708974 | None:intergenic | 30.0% | |
| TGATCATTCAAGAAAAGACT+TGG | - | chr8.2:32708620-32708639 | None:intergenic | 30.0% | |
| TTTATTTGATACATACAGGC+TGG | + | chr8.2:32706670-32706689 | MS.gene93059:intron | 30.0% | |
| ! | AAAGTCTTTTCCAATGCTAT+TGG | - | chr8.2:32707021-32707040 | None:intergenic | 30.0% |
| ! | AATAGCATTGGAAAAGACTT+TGG | + | chr8.2:32707020-32707039 | MS.gene93059:CDS | 30.0% |
| ! | ACAATGGCTTTTATTGTTAC+AGG | + | chr8.2:32709185-32709204 | MS.gene93059:intron | 30.0% |
| ! | CATTTAGAATTGGATGCTTA+AGG | - | chr8.2:32708787-32708806 | None:intergenic | 30.0% |
| ! | GGTAACAAAAGCACATTATA+CGG | - | chr8.2:32707666-32707685 | None:intergenic | 30.0% |
| ! | GTATTTTATAGTCTAGTGCA+TGG | + | chr8.2:32707318-32707337 | MS.gene93059:intron | 30.0% |
| ! | TAGTATTTTATGGTTACCCT+AGG | + | chr8.2:32708988-32709007 | MS.gene93059:intron | 30.0% |
| ! | TCATAGATTTTCCTAATGCT+TGG | + | chr8.2:32707105-32707124 | MS.gene93059:intron | 30.0% |
| ! | TCATTATTCCACTTGAGTTT+TGG | + | chr8.2:32706611-32706630 | MS.gene93059:intron | 30.0% |
| ! | TTTGGGATTGAAATTGAATG+AGG | - | chr8.2:32707817-32707836 | None:intergenic | 30.0% |
| !! | GTGCCCAAATATTTTTGTTT+GGG | - | chr8.2:32707482-32707501 | None:intergenic | 30.0% |
| !! | TGTGCCCAAATATTTTTGTT+TGG | - | chr8.2:32707483-32707502 | None:intergenic | 30.0% |
| !!! | CTTTTTTCATTTGCACTCTT+GGG | - | chr8.2:32708887-32708906 | None:intergenic | 30.0% |
| AAGTTCTTCAAGAGATCTGT+AGG | - | chr8.2:32709256-32709275 | None:intergenic | 35.0% | |
| AATAAATCCTACATGGATCC+CGG | - | chr8.2:32708248-32708267 | None:intergenic | 35.0% | |
| AATAAGATGATGTGCACTGT+AGG | + | chr8.2:32706968-32706987 | MS.gene93059:intron | 35.0% | |
| AATGATCAGAACCAAGCATT+AGG | - | chr8.2:32707119-32707138 | None:intergenic | 35.0% | |
| AATGCTATTGGTACATCTTC+TGG | - | chr8.2:32707009-32707028 | None:intergenic | 35.0% | |
| AATTTACATGCGAAGGATCA+AGG | + | chr8.2:32708071-32708090 | MS.gene93059:intron | 35.0% | |
| AATTTAGCAAACAGGTCTTC+AGG | - | chr8.2:32708947-32708966 | None:intergenic | 35.0% | |
| ACAAATCAACGTAATCAAGC+TGG | - | chr8.2:32707053-32707072 | None:intergenic | 35.0% | |
| ACAGATCTCTTGAAGAACTT+TGG | + | chr8.2:32709256-32709275 | MS.gene93059:CDS | 35.0% | |
| AGAAGATGTACCAATAGCAT+TGG | + | chr8.2:32707008-32707027 | MS.gene93059:CDS | 35.0% | |
| ATCGAAGAATTGAATTGCCT+TGG | - | chr8.2:32706484-32706503 | None:intergenic | 35.0% | |
| ATCTGAAAAGGAAGAACCAT+CGG | - | chr8.2:32708303-32708322 | None:intergenic | 35.0% | |
| ATTATATGGCAATCAGAAGG+AGG | + | chr8.2:32706717-32706736 | MS.gene93059:CDS | 35.0% | |
| CAGATCTCTTGAAGAACTTT+GGG | + | chr8.2:32709257-32709276 | MS.gene93059:CDS | 35.0% | |
| CTTATTGGAAGAAAGCGAAA+AGG | - | chr8.2:32708684-32708703 | None:intergenic | 35.0% | |
| GAACTAGACACTGAATCTTT+AGG | - | chr8.2:32707889-32707908 | None:intergenic | 35.0% | |
| GCAACATATGAGGATGAATT+TGG | - | chr8.2:32707921-32707940 | None:intergenic | 35.0% | |
| TAATAGACTGCATGTTTGCT+TGG | + | chr8.2:32707197-32707216 | MS.gene93059:intron | 35.0% | |
| TTACAGGCAAGATTACTGAA+GGG | + | chr8.2:32709201-32709220 | MS.gene93059:intron | 35.0% | |
| TTGAATGAGGATTCAGAAGT+TGG | - | chr8.2:32707804-32707823 | None:intergenic | 35.0% | |
| ! | AAAAATCTAGGGTCAAATCC+TGG | + | chr8.2:32709053-32709072 | MS.gene93059:intron | 35.0% |
| ! | CAGAAGTTGGATTCAAGTTA+AGG | - | chr8.2:32707791-32707810 | None:intergenic | 35.0% |
| ! | CCAAGAGTGCAAATGAAAAA+AGG | + | chr8.2:32708885-32708904 | MS.gene93059:CDS | 35.0% |
| ! | CGGATCCATGACTAAATTTT+TGG | - | chr8.2:32708223-32708242 | None:intergenic | 35.0% |
| ! | GTTTAGGGTTATTCACCTTT+GGG | + | chr8.2:32708734-32708753 | MS.gene93059:intron | 35.0% |
| ! | TCAGCAACCTCATTTAGAAT+TGG | - | chr8.2:32708797-32708816 | None:intergenic | 35.0% |
| ! | TGTGGATTACTTCTAAACTC+TGG | + | chr8.2:32706882-32706901 | MS.gene93059:CDS | 35.0% |
| ! | TGTTTAGGGTTATTCACCTT+TGG | + | chr8.2:32708733-32708752 | MS.gene93059:intron | 35.0% |
| ! | TTAGGTTGCAAAAGATCTTC+AGG | - | chr8.2:32708381-32708400 | None:intergenic | 35.0% |
| !!! | CCTTTTTTCATTTGCACTCT+TGG | - | chr8.2:32708888-32708907 | None:intergenic | 35.0% |
| AAGTGTGGGAATGCATTTAC+TGG | - | chr8.2:32707362-32707381 | None:intergenic | 40.0% | |
| AATGAGGTTGCTGAGAAACT+AGG | + | chr8.2:32708803-32708822 | MS.gene93059:CDS | 40.0% | |
| AGAAATAGGTGTGTAGACCT+AGG | - | chr8.2:32709008-32709027 | None:intergenic | 40.0% | |
| AGTGCATGGACATAGTTAGA+AGG | + | chr8.2:32707332-32707351 | MS.gene93059:intron | 40.0% | |
| ATTGAGCACAATCGATGTGA+CGG | - | chr8.2:32706699-32706718 | None:intergenic | 40.0% | |
| CAATTCTTCGATCTCAACAC+CGG | + | chr8.2:32706492-32706511 | MS.gene93059:CDS | 40.0% | |
| CCACGCCAAAAATTTAGTCA+TGG | + | chr8.2:32708215-32708234 | MS.gene93059:intron | 40.0% | |
| CTTCGTTGGGGATTACAAAT+GGG | + | chr8.2:32708848-32708867 | MS.gene93059:CDS | 40.0% | |
| CTTGGAAACTTACAGAGAAG+TGG | - | chr8.2:32708602-32708621 | None:intergenic | 40.0% | |
| GAAATAGGTGTGTAGACCTA+GGG | - | chr8.2:32709007-32709026 | None:intergenic | 40.0% | |
| GCGATAAAGAAAGGACCAAT+AGG | + | chr8.2:32708336-32708355 | MS.gene93059:CDS | 40.0% | |
| GTGCATGGACATAGTTAGAA+GGG | + | chr8.2:32707333-32707352 | MS.gene93059:intron | 40.0% | |
| GTTACAGGCAAGATTACTGA+AGG | + | chr8.2:32709200-32709219 | MS.gene93059:intron | 40.0% | |
| TCTTCGTTGGGGATTACAAA+TGG | + | chr8.2:32708847-32708866 | MS.gene93059:CDS | 40.0% | |
| TGCATGGACATAGTTAGAAG+GGG | + | chr8.2:32707334-32707353 | MS.gene93059:intron | 40.0% | |
| TTCTTCTCTTGCTTGCAGAT+TGG | + | chr8.2:32706809-32706828 | MS.gene93059:intron | 40.0% | |
| TTGAAGAAGCTGTTCGATGA+GGG | + | chr8.2:32706839-32706858 | MS.gene93059:CDS | 40.0% | |
| ! | TCTCTTGAAGAACTTTGGGA+TGG | + | chr8.2:32709261-32709280 | MS.gene93059:CDS | 40.0% |
| ! | TTCTTCCTTTTCAGATCCAC+TGG | + | chr8.2:32708307-32708326 | MS.gene93059:intron | 40.0% |
| !! | ATGGAAGCATTGTATGACTC+TGG | + | chr8.2:32708423-32708442 | MS.gene93059:CDS | 40.0% |
| !! | CTTTGGAATTGCAGAAATCG+CGG | - | chr8.2:32708575-32708594 | None:intergenic | 40.0% |
| !! | TGGAAGCATTGTATGACTCT+GGG | + | chr8.2:32708424-32708443 | MS.gene93059:CDS | 40.0% |
| !!! | CCATGACTAAATTTTTGGCG+TGG | - | chr8.2:32708218-32708237 | None:intergenic | 40.0% |
| AACCTAACTTAGCCAGCACA+TGG | + | chr8.2:32708394-32708413 | MS.gene93059:CDS | 45.0% | |
| AAGAGATCTGTAGGCACCAT+AGG | - | chr8.2:32709247-32709266 | None:intergenic | 45.0% | |
| AAGGACATCAGTATGAAGCC+AGG | - | chr8.2:32708768-32708787 | None:intergenic | 45.0% | |
| ACATCAGTATGAAGCCAGGT+TGG | - | chr8.2:32708764-32708783 | None:intergenic | 45.0% | |
| ATCAGTATGAAGCCAGGTTG+GGG | - | chr8.2:32708762-32708781 | None:intergenic | 45.0% | |
| ATTTAGTCATGGATCCGCTC+CGG | + | chr8.2:32708226-32708245 | MS.gene93059:intron | 45.0% | |
| CATCAGTATGAAGCCAGGTT+GGG | - | chr8.2:32708763-32708782 | None:intergenic | 45.0% | |
| CATTCCACTTGATTGACAGC+AGG | - | chr8.2:32708525-32708544 | None:intergenic | 45.0% | |
| CGCGATTTCTGCAATTCCAA+AGG | + | chr8.2:32708573-32708592 | MS.gene93059:CDS | 45.0% | |
| GCATGGACATAGTTAGAAGG+GGG | + | chr8.2:32707335-32707354 | MS.gene93059:intron | 45.0% | |
| GGTCCTTTCTTTATCGCAAC+TGG | - | chr8.2:32708333-32708352 | None:intergenic | 45.0% | |
| GTTGAAGAAGCTGTTCGATG+AGG | + | chr8.2:32706838-32706857 | MS.gene93059:CDS | 45.0% | |
| TAACTTAGCCAGCACATGGA+AGG | + | chr8.2:32708398-32708417 | MS.gene93059:CDS | 45.0% | |
| TACAGAGAAGTGGACACCTT+TGG | - | chr8.2:32708592-32708611 | None:intergenic | 45.0% | |
| TAGTGAAGCGCGAAGATTTG+TGG | + | chr8.2:32706864-32706883 | MS.gene93059:CDS | 45.0% | |
| TGCGAAATCTGTTGTGCACA+CGG | + | chr8.2:32707166-32707185 | MS.gene93059:intron | 45.0% | |
| TGGCCAGTTGCGATAAAGAA+AGG | + | chr8.2:32708327-32708346 | MS.gene93059:CDS | 45.0% | |
| TTCAGGCTTAGCCGTGAATT+CGG | - | chr8.2:32708364-32708383 | None:intergenic | 45.0% | |
| ! | AGCATTGTATGACTCTGGGA+AGG | + | chr8.2:32708428-32708447 | MS.gene93059:CDS | 45.0% |
| ! | TAGCATTTTTCTCCTTCGCC+AGG | - | chr8.2:32709074-32709093 | None:intergenic | 45.0% |
| !! | TTCCATGTGCTGGCTAAGTT+AGG | - | chr8.2:32708399-32708418 | None:intergenic | 45.0% |
| !! | AATAAAATATTAGAAAAAAA+TGG | + | chr8.2:32708105-32708124 | MS.gene93059:intron | 5.0% |
| AAGTGGAATGCCATCCTTCC+TGG | + | chr8.2:32708535-32708554 | MS.gene93059:CDS | 50.0% | |
| AATCTGTTGTGCACACGGCT+TGG | + | chr8.2:32707171-32707190 | MS.gene93059:intron | 50.0% | |
| ACTGGCCAGTGGATCTGAAA+AGG | - | chr8.2:32708315-32708334 | None:intergenic | 50.0% | |
| TCCACTTGATTGACAGCAGG+AGG | - | chr8.2:32708522-32708541 | None:intergenic | 50.0% | |
| TCCTCCTGCTGTCAATCAAG+TGG | + | chr8.2:32708518-32708537 | MS.gene93059:CDS | 50.0% | |
| TCTGGGAAGGCAAAGGCTAT+AGG | + | chr8.2:32708441-32708460 | MS.gene93059:CDS | 50.0% | |
| TCTTTATCGCAACTGGCCAG+TGG | - | chr8.2:32708326-32708345 | None:intergenic | 50.0% | |
| TGCTCAGGTAGCTCTTCGTT+GGG | + | chr8.2:32708835-32708854 | MS.gene93059:CDS | 50.0% | |
| TGTGGTCGACAAGTCTGCAA+AGG | - | chr8.2:32707297-32707316 | None:intergenic | 50.0% | |
| TTCCATTGCCTTCCATGTGC+TGG | - | chr8.2:32708409-32708428 | None:intergenic | 50.0% | |
| TTTAGTCATGGATCCGCTCC+GGG | + | chr8.2:32708227-32708246 | MS.gene93059:intron | 50.0% | |
| ! | CTCTTGCTTGCAGATTGGCT+TGG | + | chr8.2:32706814-32706833 | MS.gene93059:intron | 50.0% |
| ! | GAAGTTGGGAGATTTGCTCG+AGG | + | chr8.2:32708485-32708504 | MS.gene93059:CDS | 50.0% |
| ! | GACAAGTCTGCAAAGGCACA+TGG | - | chr8.2:32707290-32707309 | None:intergenic | 50.0% |
| ! | GTATGACTCTGGGAAGGCAA+AGG | + | chr8.2:32708434-32708453 | MS.gene93059:CDS | 50.0% |
| !! | ACCAATAGGCGCCGAATTCA+CGG | + | chr8.2:32708350-32708369 | MS.gene93059:CDS | 50.0% |
| !! | TACCTTGATGGCGGTAGCAA+CGG | - | chr8.2:32706586-32706605 | None:intergenic | 50.0% |
| AAGTTCCCAAGCCGACGGAA+GGG | - | chr8.2:32706527-32706546 | None:intergenic | 55.0% | |
| ACTAGGCAAGTCTCCTGCTC+AGG | + | chr8.2:32708820-32708839 | MS.gene93059:CDS | 55.0% | |
| AGCCAGCACATGGAAGGCAA+TGG | + | chr8.2:32708404-32708423 | MS.gene93059:CDS | 55.0% | |
| AGTTTGTCCTGCCTCCAGGA+AGG | - | chr8.2:32708552-32708571 | None:intergenic | 55.0% | |
| ATCCTACATGGATCCCGGAG+CGG | - | chr8.2:32708243-32708262 | None:intergenic | 55.0% | |
| CAACGAAGAGCTACCTGAGC+AGG | - | chr8.2:32708836-32708855 | None:intergenic | 55.0% | |
| CTAGGGTCAAATCCTGGCGA+AGG | + | chr8.2:32709059-32709078 | MS.gene93059:intron | 55.0% | |
| CTGCTCAGGTAGCTCTTCGT+TGG | + | chr8.2:32708834-32708853 | MS.gene93059:CDS | 55.0% | |
| GCTCAGGTAGCTCTTCGTTG+GGG | + | chr8.2:32708836-32708855 | MS.gene93059:CDS | 55.0% | |
| TAGCAACGGCTTCAGCAACG+AGG | - | chr8.2:32706572-32706591 | None:intergenic | 55.0% | |
| TGGAATGCCATCCTTCCTGG+AGG | + | chr8.2:32708538-32708557 | MS.gene93059:CDS | 55.0% | |
| TTGCCAAGTTCCCAAGCCGA+CGG | - | chr8.2:32706532-32706551 | None:intergenic | 55.0% | |
| !! | AAGATCCCTTCCGTCGGCTT+GGG | + | chr8.2:32706519-32706538 | MS.gene93059:CDS | 55.0% |
| AACGAGGCCAGGATCGTCCT+CGG | - | chr8.2:32706556-32706575 | None:intergenic | 60.0% | |
| AGCCGTTGCTACCGCCATCA+AGG | + | chr8.2:32706581-32706600 | MS.gene93059:CDS | 60.0% | |
| ATCCGCTCCGGGATCCATGT+AGG | + | chr8.2:32708238-32708257 | MS.gene93059:intron | 60.0% | |
| ATGCCATCCTTCCTGGAGGC+AGG | + | chr8.2:32708542-32708561 | MS.gene93059:CDS | 60.0% | |
| CAAGCCGACGGAAGGGATCT+TGG | - | chr8.2:32706520-32706539 | None:intergenic | 60.0% | |
| CAAGTTCCCAAGCCGACGGA+AGG | - | chr8.2:32706528-32706547 | None:intergenic | 60.0% | |
| CTTGGGAACTTGGCAAGCCG+AGG | + | chr8.2:32706536-32706555 | MS.gene93059:CDS | 60.0% | |
| GACGGAAGGGATCTTGGCTC+CGG | - | chr8.2:32706514-32706533 | None:intergenic | 60.0% | |
| GCCGTGAATTCGGCGCCTAT+TGG | - | chr8.2:32708354-32708373 | None:intergenic | 60.0% | |
| GGAGCCAAGATCCCTTCCGT+CGG | + | chr8.2:32706513-32706532 | MS.gene93059:CDS | 60.0% | |
| TGTCCTGCCTCCAGGAAGGA+TGG | - | chr8.2:32708548-32708567 | None:intergenic | 60.0% | |
| ! | CAAGATCCCTTCCGTCGGCT+TGG | + | chr8.2:32706518-32706537 | MS.gene93059:CDS | 60.0% |
| !! | CTTCCGTCGGCTTGGGAACT+TGG | + | chr8.2:32706526-32706545 | MS.gene93059:CDS | 60.0% |
| ACGGCTTCAGCAACGAGGCC+AGG | - | chr8.2:32706567-32706586 | None:intergenic | 65.0% | |
| CACCTTTGGGCTCCCCAACC+TGG | + | chr8.2:32708747-32708766 | MS.gene93059:CDS | 65.0% | |
| GCGGAGTTTGTCCTGCCTCC+AGG | - | chr8.2:32708556-32708575 | None:intergenic | 65.0% | |
| TGGCAAGCCGAGGACGATCC+TGG | + | chr8.2:32706546-32706565 | MS.gene93059:CDS | 65.0% | |
| ! | AGCCAGGTTGGGGAGCCCAA+AGG | - | chr8.2:32708752-32708771 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 32706477 | 32709293 | 32706477 | ID=MS.gene93059 |
| chr8.2 | mRNA | 32706477 | 32709293 | 32706477 | ID=MS.gene93059.t1;Parent=MS.gene93059 |
| chr8.2 | exon | 32706477 | 32706602 | 32706477 | ID=MS.gene93059.t1.exon1;Parent=MS.gene93059.t1 |
| chr8.2 | CDS | 32706477 | 32706602 | 32706477 | ID=cds.MS.gene93059.t1;Parent=MS.gene93059.t1 |
| chr8.2 | exon | 32706688 | 32706738 | 32706688 | ID=MS.gene93059.t1.exon2;Parent=MS.gene93059.t1 |
| chr8.2 | CDS | 32706688 | 32706738 | 32706688 | ID=cds.MS.gene93059.t1;Parent=MS.gene93059.t1 |
| chr8.2 | exon | 32706827 | 32706903 | 32706827 | ID=MS.gene93059.t1.exon3;Parent=MS.gene93059.t1 |
| chr8.2 | CDS | 32706827 | 32706903 | 32706827 | ID=cds.MS.gene93059.t1;Parent=MS.gene93059.t1 |
| chr8.2 | exon | 32706990 | 32707077 | 32706990 | ID=MS.gene93059.t1.exon4;Parent=MS.gene93059.t1 |
| chr8.2 | CDS | 32706990 | 32707077 | 32706990 | ID=cds.MS.gene93059.t1;Parent=MS.gene93059.t1 |
| chr8.2 | exon | 32708321 | 32708608 | 32708321 | ID=MS.gene93059.t1.exon5;Parent=MS.gene93059.t1 |
| chr8.2 | CDS | 32708321 | 32708608 | 32708321 | ID=cds.MS.gene93059.t1;Parent=MS.gene93059.t1 |
| chr8.2 | exon | 32708740 | 32708982 | 32708740 | ID=MS.gene93059.t1.exon6;Parent=MS.gene93059.t1 |
| chr8.2 | CDS | 32708740 | 32708982 | 32708740 | ID=cds.MS.gene93059.t1;Parent=MS.gene93059.t1 |
| chr8.2 | exon | 32709207 | 32709293 | 32709207 | ID=MS.gene93059.t1.exon7;Parent=MS.gene93059.t1 |
| chr8.2 | CDS | 32709207 | 32709293 | 32709207 | ID=cds.MS.gene93059.t1;Parent=MS.gene93059.t1 |
| Gene Sequence |
| Protein sequence |
