Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72560.t1 | XP_013455417.1 | 96.5 | 230 | 8 | 0 | 1 | 230 | 14 | 243 | 2.30E-132 | 481.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72560.t1 | Q7G764 | 46.8 | 233 | 119 | 4 | 1 | 228 | 16 | 248 | 1.2e-57 | 224.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72560.t1 | A0A072UK59 | 96.5 | 230 | 8 | 0 | 1 | 230 | 14 | 243 | 1.7e-132 | 481.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72560.t1 | MTR_4g036845 | 96.522 | 230 | 8 | 0 | 1 | 230 | 14 | 243 | 8.86e-170 | 470 |
| MS.gene72560.t1 | MTR_4g072320 | 48.498 | 233 | 112 | 4 | 1 | 230 | 17 | 244 | 1.48e-71 | 221 |
| MS.gene72560.t1 | MTR_0374s0050 | 47.234 | 235 | 118 | 5 | 1 | 230 | 20 | 253 | 1.20e-70 | 219 |
| MS.gene72560.t1 | MTR_6g073110 | 47.009 | 234 | 120 | 3 | 1 | 230 | 17 | 250 | 3.55e-67 | 210 |
| MS.gene72560.t1 | MTR_4g072350 | 47.863 | 234 | 118 | 4 | 1 | 230 | 17 | 250 | 5.24e-67 | 210 |
| MS.gene72560.t1 | MTR_4g072360 | 46.581 | 234 | 121 | 4 | 1 | 230 | 17 | 250 | 1.41e-65 | 206 |
| MS.gene72560.t1 | MTR_8g070115 | 45.494 | 233 | 119 | 4 | 1 | 230 | 16 | 243 | 2.69e-62 | 197 |
| MS.gene72560.t1 | MTR_8g070095 | 44.444 | 234 | 124 | 3 | 1 | 230 | 16 | 247 | 4.25e-62 | 197 |
| MS.gene72560.t1 | MTR_3g083130 | 42.735 | 234 | 128 | 5 | 1 | 230 | 21 | 252 | 1.29e-60 | 193 |
| MS.gene72560.t1 | MTR_5g097900 | 43.348 | 233 | 127 | 4 | 1 | 230 | 20 | 250 | 3.02e-53 | 174 |
| MS.gene72560.t1 | MTR_5g097910 | 43.348 | 233 | 127 | 4 | 1 | 230 | 20 | 250 | 3.18e-53 | 174 |
| MS.gene72560.t1 | MTR_5g097940 | 43.348 | 233 | 127 | 4 | 1 | 230 | 20 | 250 | 3.18e-53 | 174 |
| MS.gene72560.t1 | MTR_4g021350 | 42.672 | 232 | 125 | 4 | 1 | 230 | 16 | 241 | 1.49e-51 | 169 |
| MS.gene72560.t1 | MTR_4g021350 | 42.672 | 232 | 125 | 4 | 1 | 230 | 16 | 241 | 2.96e-51 | 169 |
| MS.gene72560.t1 | MTR_7g063580 | 41.004 | 239 | 120 | 5 | 1 | 230 | 56 | 282 | 5.83e-50 | 167 |
| MS.gene72560.t1 | MTR_4g072060 | 39.583 | 240 | 133 | 5 | 1 | 230 | 11 | 248 | 3.50e-46 | 156 |
| MS.gene72560.t1 | MTR_4g021410 | 40.773 | 233 | 119 | 5 | 1 | 230 | 17 | 233 | 1.25e-44 | 152 |
| MS.gene72560.t1 | MTR_4g021450 | 40.773 | 233 | 119 | 5 | 1 | 230 | 17 | 233 | 4.16e-44 | 150 |
| MS.gene72560.t1 | MTR_4g021410 | 42.512 | 207 | 104 | 3 | 26 | 230 | 3 | 196 | 9.66e-43 | 146 |
| MS.gene72560.t1 | MTR_7g070500 | 39.827 | 231 | 128 | 6 | 1 | 228 | 23 | 245 | 3.51e-41 | 143 |
| MS.gene72560.t1 | MTR_7g070500 | 39.827 | 231 | 128 | 6 | 1 | 228 | 23 | 245 | 4.54e-41 | 143 |
| MS.gene72560.t1 | MTR_4g021450 | 41.520 | 171 | 83 | 4 | 63 | 230 | 1 | 157 | 1.05e-27 | 105 |
| MS.gene72560.t1 | MTR_4g021410 | 40.588 | 170 | 86 | 3 | 63 | 230 | 1 | 157 | 3.74e-27 | 104 |
| MS.gene72560.t1 | MTR_4g021450 | 44.545 | 110 | 55 | 2 | 122 | 230 | 10 | 114 | 7.85e-24 | 94.7 |
| MS.gene72560.t1 | MTR_3g449790 | 26.906 | 223 | 115 | 9 | 4 | 196 | 50 | 254 | 1.44e-14 | 72.4 |
| MS.gene72560.t1 | MTR_3g449790 | 25.561 | 223 | 112 | 8 | 4 | 196 | 50 | 248 | 6.98e-14 | 70.5 |
| MS.gene72560.t1 | MTR_6g072650 | 51.852 | 54 | 26 | 0 | 155 | 208 | 13 | 66 | 1.96e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72560.t1 | AT5G62420 | 69.697 | 231 | 69 | 1 | 1 | 230 | 14 | 244 | 1.85e-121 | 348 |
| MS.gene72560.t1 | AT1G59960 | 45.106 | 235 | 123 | 5 | 1 | 230 | 21 | 254 | 8.64e-68 | 212 |
| MS.gene72560.t1 | AT2G37770 | 43.966 | 232 | 124 | 3 | 1 | 230 | 16 | 243 | 2.24e-63 | 200 |
| MS.gene72560.t1 | AT2G37790 | 45.494 | 233 | 119 | 4 | 1 | 230 | 16 | 243 | 2.32e-63 | 200 |
| MS.gene72560.t1 | AT2G37760 | 42.672 | 232 | 123 | 3 | 1 | 230 | 16 | 239 | 3.64e-61 | 194 |
| MS.gene72560.t1 | AT2G37760 | 42.672 | 232 | 123 | 3 | 1 | 230 | 16 | 239 | 3.90e-61 | 194 |
| MS.gene72560.t1 | AT2G37760 | 42.672 | 232 | 123 | 3 | 1 | 230 | 16 | 239 | 3.90e-61 | 194 |
| MS.gene72560.t1 | AT2G37760 | 42.672 | 232 | 123 | 3 | 1 | 230 | 16 | 239 | 9.10e-61 | 194 |
| MS.gene72560.t1 | AT2G37760 | 42.672 | 232 | 123 | 3 | 1 | 230 | 16 | 239 | 9.10e-61 | 194 |
| MS.gene72560.t1 | AT2G21250 | 40.417 | 240 | 131 | 5 | 1 | 230 | 11 | 248 | 2.92e-56 | 182 |
| MS.gene72560.t1 | AT1G59950 | 43.830 | 235 | 126 | 5 | 1 | 230 | 15 | 248 | 9.93e-56 | 181 |
| MS.gene72560.t1 | AT3G53880 | 41.810 | 232 | 129 | 3 | 1 | 230 | 16 | 243 | 3.39e-55 | 179 |
| MS.gene72560.t1 | AT3G53880 | 41.810 | 232 | 129 | 3 | 1 | 230 | 16 | 243 | 4.14e-55 | 179 |
| MS.gene72560.t1 | AT2G21260 | 39.583 | 240 | 133 | 5 | 1 | 230 | 11 | 248 | 6.58e-55 | 179 |
| MS.gene72560.t1 | AT2G21250 | 39.556 | 225 | 124 | 5 | 1 | 215 | 11 | 233 | 2.47e-52 | 170 |
| MS.gene72560.t1 | AT2G37770 | 43.005 | 193 | 104 | 3 | 1 | 191 | 16 | 204 | 2.30e-49 | 163 |
| MS.gene72560.t1 | AT5G01670 | 38.261 | 230 | 133 | 5 | 1 | 228 | 24 | 246 | 4.95e-49 | 164 |
| MS.gene72560.t1 | AT2G37760 | 43.617 | 188 | 102 | 2 | 45 | 230 | 8 | 193 | 4.78e-47 | 157 |
| MS.gene72560.t1 | AT2G37760 | 43.617 | 188 | 102 | 2 | 45 | 230 | 8 | 193 | 4.78e-47 | 157 |
| MS.gene72560.t1 | AT5G01670 | 34.630 | 257 | 132 | 6 | 1 | 228 | 24 | 273 | 1.12e-44 | 153 |
| MS.gene72560.t1 | AT2G21260 | 39.205 | 176 | 97 | 4 | 65 | 230 | 5 | 180 | 1.95e-34 | 124 |
| MS.gene72560.t1 | AT1G06690 | 28.141 | 199 | 107 | 7 | 16 | 196 | 85 | 265 | 5.79e-15 | 73.6 |
Find 63 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGATGACTTTGAAAATT+TGG | 0.094815 | 4.1:+62093895 | MS.gene72560:CDS |
| TTTGACACGGCCAAAATTTA+TGG | 0.143750 | 4.1:+62093137 | MS.gene72560:CDS |
| AAGGCAATTGATTGTATAAT+TGG | 0.200651 | 4.1:-62094557 | None:intergenic |
| CATGTAGATTGCCTTATTTA+TGG | 0.211532 | 4.1:-62093183 | None:intergenic |
| TCTGTTGTCTTCTTATCATT+TGG | 0.211759 | 4.1:-62092546 | None:intergenic |
| GAATCTGGACATGGACTATT+TGG | 0.224464 | 4.1:+62093811 | MS.gene72560:CDS |
| TGGCTCAGAACCATAAATTT+TGG | 0.248086 | 4.1:-62093147 | None:intergenic |
| CTGTTGTCTTCTTATCATTT+GGG | 0.296041 | 4.1:-62092545 | None:intergenic |
| TGAAATTTAATTACCTGTGC+TGG | 0.326139 | 4.1:-62094596 | None:intergenic |
| ACAATGCCTCTCATTGGATT+TGG | 0.330693 | 4.1:+62092510 | None:intergenic |
| ATTAGGCAATGCCATAAATA+AGG | 0.350442 | 4.1:+62093172 | MS.gene72560:CDS |
| TGGGGTTGCTTTGTGTTTGA+AGG | 0.388559 | 4.1:-62094576 | None:intergenic |
| GGCATTACAATGCCTCTCAT+TGG | 0.395160 | 4.1:+62092504 | None:intergenic |
| TACACCTCCAGTTGTTAATC+AGG | 0.396062 | 4.1:+62094033 | MS.gene72560:CDS |
| TTAATTACCTGATTAACAAC+TGG | 0.420192 | 4.1:-62094040 | None:intergenic |
| TACTCACCACTTGGTGGACC+AGG | 0.421010 | 4.1:+62094500 | MS.gene72560:CDS |
| GAAATTTAATTACCTGTGCT+GGG | 0.421840 | 4.1:-62094595 | None:intergenic |
| AAGTCATCTTCATTAGGAAC+AGG | 0.433658 | 4.1:-62093884 | None:intergenic |
| TTTATGGCATTGCCTAATGC+TGG | 0.448486 | 4.1:-62093167 | None:intergenic |
| CATAAATAAGGCAATCTACA+TGG | 0.451120 | 4.1:+62093184 | MS.gene72560:CDS |
| TTGGTGGACCAGGGAATGCA+TGG | 0.463271 | 4.1:+62094510 | MS.gene72560:CDS |
| TATGGTTCTGAGCCAGCATT+AGG | 0.464141 | 4.1:+62093155 | MS.gene72560:CDS |
| GTTGATCCCCATGCATTCCC+TGG | 0.477901 | 4.1:-62094518 | None:intergenic |
| TTTCTTGACATCCAAATTGT+GGG | 0.481755 | 4.1:+62093229 | MS.gene72560:CDS |
| GCCTGTAAAGTTAAAACCAT+GGG | 0.488120 | 4.1:+62093853 | MS.gene72560:CDS |
| GTCTTGAAATGGGGTTATGT+AGG | 0.513056 | 4.1:+62093951 | MS.gene72560:CDS |
| TTAATGCAGCAACAGGATCA+TGG | 0.518812 | 4.1:-62093262 | None:intergenic |
| TGGATATGTACCTAGTGCAT+TGG | 0.523656 | 4.1:+62093831 | MS.gene72560:CDS |
| TGTCTTCTTATCATTTGGGT+AGG | 0.528221 | 4.1:-62092541 | None:intergenic |
| ATGGGGTTATGTAGGTCCAT+TGG | 0.529847 | 4.1:+62093959 | MS.gene72560:CDS |
| ATTTGGATCTTGAGACAACA+TGG | 0.540374 | 4.1:+62093912 | MS.gene72560:CDS |
| ACTTTACAGGCCAATGCACT+AGG | 0.547784 | 4.1:-62093841 | None:intergenic |
| TCTACATGGGAGAAGTAAAG+AGG | 0.554077 | 4.1:+62093198 | MS.gene72560:CDS |
| TGGTGGACCAGGGAATGCAT+GGG | 0.560104 | 4.1:+62094511 | MS.gene72560:CDS |
| TGAGACAACATGGGTAGGGA+TGG | 0.572572 | 4.1:+62093922 | MS.gene72560:CDS |
| TTCTTGACATCCAAATTGTG+GGG | 0.578334 | 4.1:+62093230 | MS.gene72560:CDS |
| GGAACAGGATAGTTAACCCA+TGG | 0.578853 | 4.1:-62093869 | None:intergenic |
| TGGTCCACCAAGTGGTGAGT+AGG | 0.583500 | 4.1:-62094498 | None:intergenic |
| GATCTTGAGACAACATGGGT+AGG | 0.585515 | 4.1:+62093917 | MS.gene72560:CDS |
| ACACAAAGCAACCCCAGCAC+AGG | 0.586444 | 4.1:+62094583 | MS.gene72560:CDS |
| AGAGAAATTACTAACTCCAA+TGG | 0.591742 | 4.1:-62093975 | None:intergenic |
| ATCTTGAGACAACATGGGTA+GGG | 0.592828 | 4.1:+62093918 | MS.gene72560:CDS |
| ATAAATAAGGCAATCTACAT+GGG | 0.593397 | 4.1:+62093185 | MS.gene72560:CDS |
| TGCAGTCCACAATGCCCTTG+AGG | 0.593505 | 4.1:+62092572 | MS.gene72560:CDS |
| TCTCTAGCAACAAGATTGAG+TGG | 0.593774 | 4.1:+62093993 | MS.gene72560:CDS |
| GGCCTGTAAAGTTAAAACCA+TGG | 0.600838 | 4.1:+62093852 | MS.gene72560:CDS |
| CTACATGGGAGAAGTAAAGA+GGG | 0.601362 | 4.1:+62093199 | MS.gene72560:CDS |
| GTAAGTGCCTACTCACCACT+TGG | 0.619442 | 4.1:+62094491 | MS.gene72560:CDS |
| AGTGCCTACTCACCACTTGG+TGG | 0.619529 | 4.1:+62094494 | MS.gene72560:CDS |
| AGCTTTCTCTGCCTCCACAT+AGG | 0.620551 | 4.1:-62094437 | None:intergenic |
| TCTTGACATCCAAATTGTGG+GGG | 0.621026 | 4.1:+62093231 | MS.gene72560:CDS |
| AGGTGGAAATGCATCCTATG+TGG | 0.626109 | 4.1:+62094423 | MS.gene72560:intron |
| ATTACCTGATTAACAACTGG+AGG | 0.626966 | 4.1:-62094037 | None:intergenic |
| AGAAAGCTGAGAAAGACATG+TGG | 0.633349 | 4.1:+62094452 | MS.gene72560:CDS |
| GATTAAGGTTAGTACCTCAA+GGG | 0.643115 | 4.1:-62092586 | None:intergenic |
| AAATTTAATTACCTGTGCTG+GGG | 0.643136 | 4.1:-62094594 | None:intergenic |
| TAAGTGCCAAATCCAATGAG+AGG | 0.655261 | 4.1:-62092516 | None:intergenic |
| TGGAAATGCATCCTATGTGG+AGG | 0.657202 | 4.1:+62094426 | MS.gene72560:CDS |
| GGTGGACCAGGGAATGCATG+GGG | 0.659494 | 4.1:+62094512 | MS.gene72560:CDS |
| GCATTCCCTGGTCCACCAAG+TGG | 0.660549 | 4.1:-62094506 | None:intergenic |
| TTTGGATCTTGAGACAACAT+GGG | 0.665864 | 4.1:+62093913 | MS.gene72560:CDS |
| ACTCACCACTTGGTGGACCA+GGG | 0.670084 | 4.1:+62094501 | MS.gene72560:CDS |
| TTAGTACCTCAAGGGCATTG+TGG | 0.678400 | 4.1:-62092578 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAATACATAATTAATTAA+TGG | + | chr4.1:62097505-62097524 | MS.gene72560:intron | 10.0% |
| !! | CAAAAAGTTAAAATATTTAT+AGG | + | chr4.1:62095775-62095794 | MS.gene72560:intron | 10.0% |
| !! | CAAATACATAATTAATTAAT+GGG | + | chr4.1:62097506-62097525 | MS.gene72560:intron | 10.0% |
| !! | TTGTAATAGTAATAATAATA+TGG | - | chr4.1:62097056-62097075 | None:intergenic | 10.0% |
| !!! | GGAATTTTTTTTTTTTTTTT+TGG | + | chr4.1:62097830-62097849 | MS.gene72560:intron | 10.0% |
| !! | AAAAATGTTAACAATTTCTT+TGG | - | chr4.1:62096980-62096999 | None:intergenic | 15.0% |
| !! | AAATTACTATCAAATCAAAA+GGG | - | chr4.1:62097641-62097660 | None:intergenic | 15.0% |
| !! | AATCATGTTCAATTAATAAA+AGG | - | chr4.1:62095865-62095884 | None:intergenic | 15.0% |
| !! | ATGAATTATAATAGTGATTA+TGG | - | chr4.1:62095147-62095166 | None:intergenic | 15.0% |
| !! | ATTCATAATTCATTTCAAAA+AGG | + | chr4.1:62095161-62095180 | MS.gene72560:intron | 15.0% |
| !! | TAAATTACTATCAAATCAAA+AGG | - | chr4.1:62097642-62097661 | None:intergenic | 15.0% |
| !! | TAAATTATTCTTAAATTTCG+TGG | - | chr4.1:62093602-62093621 | None:intergenic | 15.0% |
| !! | TAATATCTTGATATATACTT+AGG | + | chr4.1:62094403-62094422 | MS.gene72560:intron | 15.0% |
| !! | TATATTTGTGTTCAATAATA+AGG | - | chr4.1:62093083-62093102 | None:intergenic | 15.0% |
| !! | TTAAAAAATAGACAAATGAT+AGG | - | chr4.1:62097029-62097048 | None:intergenic | 15.0% |
| !! | TTCATAATTCATTTCAAAAA+GGG | + | chr4.1:62095162-62095181 | MS.gene72560:intron | 15.0% |
| !!! | AATAATTACAAGTTTTACAA+GGG | + | chr4.1:62097563-62097582 | MS.gene72560:intron | 15.0% |
| !!! | CTAGTTTAAAATATTAATAG+CGG | - | chr4.1:62092733-62092752 | None:intergenic | 15.0% |
| !!! | TAATAATTACAAGTTTTACA+AGG | + | chr4.1:62097562-62097581 | MS.gene72560:intron | 15.0% |
| !!! | TATATTTGAGATTGAAAAAT+TGG | + | chr4.1:62095027-62095046 | MS.gene72560:intron | 15.0% |
| !!! | TATTGATGATTAAAATACAA+AGG | - | chr4.1:62095324-62095343 | None:intergenic | 15.0% |
| !!! | TATTTTTAATACTCTTTTGT+AGG | + | chr4.1:62097893-62097912 | MS.gene72560:intron | 15.0% |
| !!! | TGAGATTTAATATTGATTTT+TGG | + | chr4.1:62093765-62093784 | MS.gene72560:intron | 15.0% |
| !!! | TGTAAAAAAAAATTCTAAGA+TGG | + | chr4.1:62093365-62093384 | MS.gene72560:intron | 15.0% |
| !!! | TTTTTTTACATGAAATGAAA+AGG | - | chr4.1:62093355-62093374 | None:intergenic | 15.0% |
| !! | AAATACAAGGAAGAAAAAAA+AGG | + | chr4.1:62097320-62097339 | MS.gene72560:intron | 20.0% |
| !! | AATATATATAGTTGCATGAT+TGG | + | chr4.1:62095340-62095359 | MS.gene72560:intron | 20.0% |
| !! | ATGAACATGTATTTATAAGT+GGG | + | chr4.1:62093527-62093546 | MS.gene72560:intron | 20.0% |
| !! | CACTAAGTAGTATAAAATAT+TGG | + | chr4.1:62095910-62095929 | MS.gene72560:intron | 20.0% |
| !! | CTTTCTAAATTAAACTGTTA+TGG | - | chr4.1:62097755-62097774 | None:intergenic | 20.0% |
| !! | TAATCAGGTAATTAACTAAT+TGG | + | chr4.1:62094048-62094067 | MS.gene72560:intron | 20.0% |
| !! | TATAAGAAAAAACCATTTGT+AGG | + | chr4.1:62094107-62094126 | MS.gene72560:intron | 20.0% |
| !! | TCTCTTCTAGTAATTATTAT+TGG | - | chr4.1:62095613-62095632 | None:intergenic | 20.0% |
| !! | TGTATCATTAGTAAAATGAA+TGG | + | chr4.1:62094838-62094857 | MS.gene72560:intron | 20.0% |
| !! | TGTCAAATTTATTTGAACAT+TGG | - | chr4.1:62094767-62094786 | None:intergenic | 20.0% |
| !!! | AAAAACAGAGATTAATTTGA+TGG | + | chr4.1:62092905-62092924 | MS.gene72560:intron | 20.0% |
| !!! | ATAATTTGAAGTGTATTTGA+TGG | + | chr4.1:62095703-62095722 | MS.gene72560:intron | 20.0% |
| !!! | ATTAATTTAAAATACAAGGG+AGG | - | chr4.1:62092991-62093010 | None:intergenic | 20.0% |
| !!! | ATTGAACTTCTTTTTTTTGT+AGG | + | chr4.1:62097941-62097960 | MS.gene72560:intron | 20.0% |
| !!! | CATAACAGTTTAATTTAGAA+AGG | + | chr4.1:62097753-62097772 | MS.gene72560:intron | 20.0% |
| !!! | CCAAATTAAAATGATTTGTA+TGG | + | chr4.1:62095743-62095762 | MS.gene72560:intron | 20.0% |
| !!! | CCATACAAATCATTTTAATT+TGG | - | chr4.1:62095746-62095765 | None:intergenic | 20.0% |
| !!! | CTAAAATGTGTAAAAACTTT+TGG | + | chr4.1:62096455-62096474 | MS.gene72560:intron | 20.0% |
| !!! | GGACGAAAATTTTAAAAAAA+TGG | + | chr4.1:62097774-62097793 | MS.gene72560:intron | 20.0% |
| !!! | GTCAAATACATAATTTTTTG+TGG | + | chr4.1:62096520-62096539 | MS.gene72560:intron | 20.0% |
| !!! | TGAAAAACTCAATCTATTTT+CGG | + | chr4.1:62096684-62096703 | MS.gene72560:intron | 20.0% |
| !!! | TGTTTTTTTACTTTATTCCA+TGG | - | chr4.1:62096311-62096330 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTTTTGGCGT+GGG | + | chr4.1:62097836-62097855 | MS.gene72560:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTTTGGCG+TGG | + | chr4.1:62097835-62097854 | MS.gene72560:intron | 20.0% |
| ! | AAAAACACATGAAAAATCCA+TGG | + | chr4.1:62096324-62096343 | MS.gene72560:intron | 25.0% |
| ! | AAAGGTTTAGAGGATTATAA+TGG | - | chr4.1:62097249-62097268 | None:intergenic | 25.0% |
| ! | AACAAATGTGTATGTGATTA+AGG | - | chr4.1:62092604-62092623 | None:intergenic | 25.0% |
| ! | AAGAAATGAAGATTATGAGA+GGG | + | chr4.1:62095050-62095069 | MS.gene72560:intron | 25.0% |
| ! | AAGGCAATTGATTGTATAAT+TGG | - | chr4.1:62094560-62094579 | None:intergenic | 25.0% |
| ! | AAGGTTTAGAGGATTATAAT+GGG | - | chr4.1:62097248-62097267 | None:intergenic | 25.0% |
| ! | AAGTTTCAATGATGAAAGAA+TGG | + | chr4.1:62094961-62094980 | MS.gene72560:intron | 25.0% |
| ! | ACAAAACAATTGAAGAACTT+TGG | + | chr4.1:62095104-62095123 | MS.gene72560:intron | 25.0% |
| ! | ACAAACATAAACTGTAACAA+TGG | + | chr4.1:62096253-62096272 | MS.gene72560:intron | 25.0% |
| ! | AGTAAAATGATCAATTTGGA+GGG | - | chr4.1:62095669-62095688 | None:intergenic | 25.0% |
| ! | ATAAATAAGGCAATCTACAT+GGG | + | chr4.1:62093185-62093204 | MS.gene72560:CDS | 25.0% |
| ! | ATGAAGCAATAAAACAACAA+CGG | + | chr4.1:62096825-62096844 | MS.gene72560:intron | 25.0% |
| ! | ATGGAAAAATGTCTTGAAAT+GGG | + | chr4.1:62093941-62093960 | MS.gene72560:CDS | 25.0% |
| ! | ATGTATACAGTATTCATGAA+TGG | + | chr4.1:62097809-62097828 | MS.gene72560:intron | 25.0% |
| ! | CAAAACAATTGAAGAACTTT+GGG | + | chr4.1:62095105-62095124 | MS.gene72560:intron | 25.0% |
| ! | CATGAACATGTATTTATAAG+TGG | + | chr4.1:62093526-62093545 | MS.gene72560:intron | 25.0% |
| ! | GAAAAAATGAGTAAATGAAG+TGG | + | chr4.1:62094341-62094360 | MS.gene72560:intron | 25.0% |
| ! | GAATAACTACAAAATCACAA+TGG | + | chr4.1:62097463-62097482 | MS.gene72560:intron | 25.0% |
| ! | GATGATTAAAATACAAAGGT+TGG | - | chr4.1:62095320-62095339 | None:intergenic | 25.0% |
| ! | GCATAAAGTCTTCTATAAAT+TGG | + | chr4.1:62096570-62096589 | MS.gene72560:intron | 25.0% |
| ! | TACGAGTAAAATGATCAATT+TGG | - | chr4.1:62095673-62095692 | None:intergenic | 25.0% |
| ! | TATCTTGATATATACTTAGG+TGG | + | chr4.1:62094406-62094425 | MS.gene72560:intron | 25.0% |
| ! | TGAACATGTATTTATAAGTG+GGG | + | chr4.1:62093528-62093547 | MS.gene72560:intron | 25.0% |
| ! | TGATACAAATGCAACTAATT+TGG | - | chr4.1:62094825-62094844 | None:intergenic | 25.0% |
| ! | TGTTAACAATTTCTTTGGAT+TGG | - | chr4.1:62096975-62096994 | None:intergenic | 25.0% |
| ! | TTAAACAAAGTTGACATATC+TGG | + | chr4.1:62097343-62097362 | MS.gene72560:intron | 25.0% |
| ! | TTAATTACCTGATTAACAAC+TGG | - | chr4.1:62094043-62094062 | None:intergenic | 25.0% |
| ! | TTATTAGATCAACCTACAAA+TGG | - | chr4.1:62094122-62094141 | None:intergenic | 25.0% |
| ! | TTGAATCTAGAAAACATCAA+AGG | + | chr4.1:62097693-62097712 | MS.gene72560:intron | 25.0% |
| !! | AGAAACTTTTGGCAAAAAAA+GGG | + | chr4.1:62092825-62092844 | MS.gene72560:intron | 25.0% |
| !! | CATCATTTTATGATACCAAA+AGG | - | chr4.1:62097538-62097557 | None:intergenic | 25.0% |
| !! | CTTTTGGTATCATAAAATGA+TGG | + | chr4.1:62097536-62097555 | MS.gene72560:intron | 25.0% |
| !! | TGAAGATGACTTTGAAAATT+TGG | + | chr4.1:62093895-62093914 | MS.gene72560:CDS | 25.0% |
| !! | TTTAAAATATTAATAGCGGC+AGG | - | chr4.1:62092729-62092748 | None:intergenic | 25.0% |
| !! | TTTTACTTGAATGCAAAAAC+AGG | + | chr4.1:62093789-62093808 | MS.gene72560:intron | 25.0% |
| !! | TTTTCAAAGTCATCTTCATT+AGG | - | chr4.1:62093893-62093912 | None:intergenic | 25.0% |
| !!! | AAGTTCTTCAATTGTTTTGT+AGG | - | chr4.1:62095104-62095123 | None:intergenic | 25.0% |
| !!! | AGTTCTTCAATTGTTTTGTA+GGG | - | chr4.1:62095103-62095122 | None:intergenic | 25.0% |
| !!! | ATTAATGGGTTTTTTCCTTT+TGG | + | chr4.1:62097520-62097539 | MS.gene72560:intron | 25.0% |
| !!! | ATTTTCTCTGGTTTAAATCT+TGG | - | chr4.1:62097162-62097181 | None:intergenic | 25.0% |
| !!! | TAGGCATCAGATTTTAATTT+TGG | - | chr4.1:62093705-62093724 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTTTGGCGTG+GGG | + | chr4.1:62097837-62097856 | MS.gene72560:intron | 25.0% |
| AAAGATAGAGACCAGTTTAA+TGG | - | chr4.1:62092684-62092703 | None:intergenic | 30.0% | |
| AAATTTAATTACCTGTGCTG+GGG | - | chr4.1:62094597-62094616 | None:intergenic | 30.0% | |
| AACCATAAAGGATGATAGAT+TGG | - | chr4.1:62095383-62095402 | None:intergenic | 30.0% | |
| AATCAACTTGTATGTGGAAT+TGG | - | chr4.1:62096076-62096095 | None:intergenic | 30.0% | |
| ACATCAAAGGATTATTAGCA+AGG | + | chr4.1:62097706-62097725 | MS.gene72560:intron | 30.0% | |
| ACTATCAAATCAAAAGGGAA+AGG | - | chr4.1:62097636-62097655 | None:intergenic | 30.0% | |
| AGAAATGAAGATTATGAGAG+GGG | + | chr4.1:62095051-62095070 | MS.gene72560:intron | 30.0% | |
| AGAGAAATTACTAACTCCAA+TGG | - | chr4.1:62093978-62093997 | None:intergenic | 30.0% | |
| AGTCTACTGATATTGACATT+AGG | - | chr4.1:62094308-62094327 | None:intergenic | 30.0% | |
| ATATATGTGTGTATGTATGC+AGG | + | chr4.1:62093100-62093119 | MS.gene72560:intron | 30.0% | |
| ATCAAAAAACTGTCCAGTAT+TGG | + | chr4.1:62096407-62096426 | MS.gene72560:intron | 30.0% | |
| ATCAACTTGTATGTGGAATT+GGG | - | chr4.1:62096075-62096094 | None:intergenic | 30.0% | |
| ATCCAATCTATCATCCTTTA+TGG | + | chr4.1:62095378-62095397 | MS.gene72560:intron | 30.0% | |
| ATTAGGCAATGCCATAAATA+AGG | + | chr4.1:62093172-62093191 | MS.gene72560:CDS | 30.0% | |
| ATTGAAATGGGGATTATCAA+AGG | + | chr4.1:62094919-62094938 | MS.gene72560:intron | 30.0% | |
| ATTGAGGTTGAATGAGAAAT+TGG | + | chr4.1:62096200-62096219 | MS.gene72560:intron | 30.0% | |
| ATTTATCAGCACAATTCGAA+AGG | + | chr4.1:62096870-62096889 | MS.gene72560:intron | 30.0% | |
| ATTTGAAGGTTGCATTGAAA+TGG | + | chr4.1:62094906-62094925 | MS.gene72560:intron | 30.0% | |
| CAAAAGATTTGTCACACAAT+AGG | - | chr4.1:62093724-62093743 | None:intergenic | 30.0% | |
| CAAGATGATGAAACAGAAAA+AGG | + | chr4.1:62096029-62096048 | MS.gene72560:intron | 30.0% | |
| CACTATAAACAATCAGCTTT+CGG | - | chr4.1:62095279-62095298 | None:intergenic | 30.0% | |
| CATAAATAAGGCAATCTACA+TGG | + | chr4.1:62093184-62093203 | MS.gene72560:CDS | 30.0% | |
| CATGAATACTTATCTAGTAG+AGG | + | chr4.1:62096628-62096647 | MS.gene72560:intron | 30.0% | |
| CTAGATAAGTATTCATGGTT+TGG | - | chr4.1:62096625-62096644 | None:intergenic | 30.0% | |
| CTCTACTAGATAAGTATTCA+TGG | - | chr4.1:62096630-62096649 | None:intergenic | 30.0% | |
| CTGTTGTCTTCTTATCATTT+GGG | - | chr4.1:62092548-62092567 | None:intergenic | 30.0% | |
| CTTCTATAAATTGGCATGTT+TGG | + | chr4.1:62096579-62096598 | MS.gene72560:intron | 30.0% | |
| GAAAGAATGGAGGAAAATAT+GGG | + | chr4.1:62094974-62094993 | MS.gene72560:intron | 30.0% | |
| GAAATTTAATTACCTGTGCT+GGG | - | chr4.1:62094598-62094617 | None:intergenic | 30.0% | |
| GAAGAAATGAAGATTATGAG+AGG | + | chr4.1:62095049-62095068 | MS.gene72560:intron | 30.0% | |
| GAGTAAAATGATCAATTTGG+AGG | - | chr4.1:62095670-62095689 | None:intergenic | 30.0% | |
| GATGGAAAAATGTCTTGAAA+TGG | + | chr4.1:62093940-62093959 | MS.gene72560:CDS | 30.0% | |
| GTCAAATGACAAAAACATGA+CGG | + | chr4.1:62092791-62092810 | MS.gene72560:intron | 30.0% | |
| GTCTACTGATATTGACATTA+GGG | - | chr4.1:62094307-62094326 | None:intergenic | 30.0% | |
| TAACGAGTAAACCATTAAAC+TGG | + | chr4.1:62092670-62092689 | MS.gene72560:intron | 30.0% | |
| TAATGTCAATATCAGTAGAC+TGG | + | chr4.1:62094307-62094326 | MS.gene72560:intron | 30.0% | |
| TATACAATCCAAACCAATAC+TGG | - | chr4.1:62096423-62096442 | None:intergenic | 30.0% | |
| TATATAAACACTGAAGGACT+TGG | + | chr4.1:62097097-62097116 | MS.gene72560:intron | 30.0% | |
| TCAAACATCGTAGATGTATA+TGG | - | chr4.1:62097381-62097400 | None:intergenic | 30.0% | |
| TCAATGAAAGTTTGAACATG+TGG | + | chr4.1:62096276-62096295 | MS.gene72560:intron | 30.0% | |
| TCTGTTGTCTTCTTATCATT+TGG | - | chr4.1:62092549-62092568 | None:intergenic | 30.0% | |
| TGAAAGAATGGAGGAAAATA+TGG | + | chr4.1:62094973-62094992 | MS.gene72560:intron | 30.0% | |
| TGAAATTTAATTACCTGTGC+TGG | - | chr4.1:62094599-62094618 | None:intergenic | 30.0% | |
| TGGAAAAATGTCTTGAAATG+GGG | + | chr4.1:62093942-62093961 | MS.gene72560:CDS | 30.0% | |
| TTCATATTCCAAAGTAGGTT+TGG | + | chr4.1:62095495-62095514 | MS.gene72560:intron | 30.0% | |
| TTGAAATGGGGATTATCAAA+GGG | + | chr4.1:62094920-62094939 | MS.gene72560:intron | 30.0% | |
| TTGAGGTTGAATGAGAAATT+GGG | + | chr4.1:62096201-62096220 | MS.gene72560:intron | 30.0% | |
| TTGCCAAAAGTTTCTCAATT+AGG | - | chr4.1:62092820-62092839 | None:intergenic | 30.0% | |
| TTTATCAGCACAATTCGAAA+GGG | + | chr4.1:62096871-62096890 | MS.gene72560:intron | 30.0% | |
| TTTCAATGATGAAAGAATGG+AGG | + | chr4.1:62094964-62094983 | MS.gene72560:intron | 30.0% | |
| TTTCTTGACATCCAAATTGT+GGG | + | chr4.1:62093229-62093248 | MS.gene72560:CDS | 30.0% | |
| TTTGAAGGTTGCATTGAAAT+GGG | + | chr4.1:62094907-62094926 | MS.gene72560:intron | 30.0% | |
| ! | AGACCTAATTGAGAAACTTT+TGG | + | chr4.1:62092814-62092833 | MS.gene72560:intron | 30.0% |
| ! | CATTTTCACTAGATTTTCTC+TGG | - | chr4.1:62097174-62097193 | None:intergenic | 30.0% |
| ! | CTACGATGTTTGACTATTTT+TGG | + | chr4.1:62097388-62097407 | MS.gene72560:intron | 30.0% |
| ! | GAAACAGCACAAAATTTTGA+TGG | - | chr4.1:62096377-62096396 | None:intergenic | 30.0% |
| ! | GAGAAACTTTTGGCAAAAAA+AGG | + | chr4.1:62092824-62092843 | MS.gene72560:intron | 30.0% |
| ! | TTTTCTTGACATCCAAATTG+TGG | + | chr4.1:62093228-62093247 | MS.gene72560:CDS | 30.0% |
| !! | AAATACAAAGGTTGGTTTAG+TGG | - | chr4.1:62095312-62095331 | None:intergenic | 30.0% |
| !! | AATACAAAGGTTGGTTTAGT+GGG | - | chr4.1:62095311-62095330 | None:intergenic | 30.0% |
| !! | CATGTAGATTGCCTTATTTA+TGG | - | chr4.1:62093186-62093205 | None:intergenic | 30.0% |
| !! | GACTATGATCTTTGATTTGA+AGG | + | chr4.1:62094892-62094911 | MS.gene72560:intron | 30.0% |
| !!! | TTCCACATACAAGTTGATTT+TGG | + | chr4.1:62096077-62096096 | MS.gene72560:intron | 30.0% |
| !!! | TTGACAACCAGTTTTAAAAC+CGG | + | chr4.1:62096916-62096935 | MS.gene72560:intron | 30.0% |
| AAGTCATCTTCATTAGGAAC+AGG | - | chr4.1:62093887-62093906 | None:intergenic | 35.0% | |
| AAGTCTTAAGCAAACACCAT+CGG | - | chr4.1:62094247-62094266 | None:intergenic | 35.0% | |
| AATCTCAACCACAGACATAA+GGG | + | chr4.1:62096740-62096759 | MS.gene72560:intron | 35.0% | |
| ACAGTTGAGGAGATAAATTG+AGG | + | chr4.1:62096184-62096203 | MS.gene72560:intron | 35.0% | |
| ACTGAATGAAGTAACCCATT+TGG | + | chr4.1:62094215-62094234 | MS.gene72560:intron | 35.0% | |
| AGAAATTGGGAAGAATGAGT+AGG | + | chr4.1:62096214-62096233 | MS.gene72560:intron | 35.0% | |
| AGTTGAGTTTAGAAGAATCC+TGG | - | chr4.1:62095248-62095267 | None:intergenic | 35.0% | |
| ATAACCCTTGAGTGGAATTA+AGG | + | chr4.1:62097135-62097154 | MS.gene72560:intron | 35.0% | |
| ATATTCCAAAGTAGGTTTGG+AGG | + | chr4.1:62095498-62095517 | MS.gene72560:intron | 35.0% | |
| ATCATATTTATCCCTCGAAC+CGG | - | chr4.1:62096938-62096957 | None:intergenic | 35.0% | |
| ATGTAATCAACTACTCGCTT+TGG | - | chr4.1:62097424-62097443 | None:intergenic | 35.0% | |
| ATTACCTGATTAACAACTGG+AGG | - | chr4.1:62094040-62094059 | None:intergenic | 35.0% | |
| ATTTGGATCTTGAGACAACA+TGG | + | chr4.1:62093912-62093931 | MS.gene72560:CDS | 35.0% | |
| CAAAAATTGTCGATGCAATG+TGG | - | chr4.1:62096547-62096566 | None:intergenic | 35.0% | |
| CAAACAGTGTGACATCAATA+TGG | - | chr4.1:62096711-62096730 | None:intergenic | 35.0% | |
| CAATTTATCTCCTCAACTGT+AGG | - | chr4.1:62096184-62096203 | None:intergenic | 35.0% | |
| CACCTCTATATAAACACTGA+AGG | + | chr4.1:62097091-62097110 | MS.gene72560:intron | 35.0% | |
| CATATTGATGTCACACTGTT+TGG | + | chr4.1:62096709-62096728 | MS.gene72560:intron | 35.0% | |
| CCTTAATCACCAAGATTTGA+TGG | - | chr4.1:62096352-62096371 | None:intergenic | 35.0% | |
| CGGATTTCATATTCCAAAGT+AGG | + | chr4.1:62095490-62095509 | MS.gene72560:intron | 35.0% | |
| CTAACTCAATCTCTCAAAAC+CGG | - | chr4.1:62093573-62093592 | None:intergenic | 35.0% | |
| CTGAATGAAGTAACCCATTT+GGG | + | chr4.1:62094216-62094235 | MS.gene72560:intron | 35.0% | |
| GACCAAAATCAACTTGTATG+TGG | - | chr4.1:62096082-62096101 | None:intergenic | 35.0% | |
| GATTAAGGTTAGTACCTCAA+GGG | - | chr4.1:62092589-62092608 | None:intergenic | 35.0% | |
| GCCTGTAAAGTTAAAACCAT+GGG | + | chr4.1:62093853-62093872 | MS.gene72560:CDS | 35.0% | |
| GGGATCATTTGATCTAAACT+TGG | + | chr4.1:62094994-62095013 | MS.gene72560:intron | 35.0% | |
| GGTTGGAAAACAAACCATAA+AGG | - | chr4.1:62095395-62095414 | None:intergenic | 35.0% | |
| GTAGTAAACTACAACTAGCT+TGG | - | chr4.1:62096660-62096679 | None:intergenic | 35.0% | |
| GTCCTTCAGTGTTTATATAG+AGG | - | chr4.1:62097096-62097115 | None:intergenic | 35.0% | |
| TAACCCTTGAGTGGAATTAA+GGG | + | chr4.1:62097136-62097155 | MS.gene72560:intron | 35.0% | |
| TCTAGTGAAAATGTCACAAG+AGG | + | chr4.1:62097181-62097200 | MS.gene72560:intron | 35.0% | |
| TGAATGCAAAAACAGGAATC+TGG | + | chr4.1:62093796-62093815 | MS.gene72560:intron | 35.0% | |
| TGATTAAGGTTAGTACCTCA+AGG | - | chr4.1:62092590-62092609 | None:intergenic | 35.0% | |
| TGTAAAAAAGCCTACAGTTG+AGG | + | chr4.1:62096171-62096190 | MS.gene72560:intron | 35.0% | |
| TGTCTTCTTATCATTTGGGT+AGG | - | chr4.1:62092544-62092563 | None:intergenic | 35.0% | |
| TGTGATCCAATAGATCTTAG+CGG | - | chr4.1:62093402-62093421 | None:intergenic | 35.0% | |
| TTCTAGATTCAACTTGACGT+TGG | - | chr4.1:62097685-62097704 | None:intergenic | 35.0% | |
| TTCTTGACATCCAAATTGTG+GGG | + | chr4.1:62093230-62093249 | MS.gene72560:CDS | 35.0% | |
| TTGAAGGTTGCATTGAAATG+GGG | + | chr4.1:62094908-62094927 | MS.gene72560:intron | 35.0% | |
| TTTGACACGGCCAAAATTTA+TGG | + | chr4.1:62093137-62093156 | MS.gene72560:CDS | 35.0% | |
| TTTGGATCTTGAGACAACAT+GGG | + | chr4.1:62093913-62093932 | MS.gene72560:CDS | 35.0% | |
| ! | AACCATTGGTTGTTGCAATT+TGG | - | chr4.1:62093674-62093693 | None:intergenic | 35.0% |
| ! | CCATCAAATCTTGGTGATTA+AGG | + | chr4.1:62096349-62096368 | MS.gene72560:intron | 35.0% |
| ! | GATAAGTATTCATGGTTTGG+TGG | - | chr4.1:62096622-62096641 | None:intergenic | 35.0% |
| ! | GTTATGTCTTTTCTATGACC+AGG | + | chr4.1:62095227-62095246 | MS.gene72560:intron | 35.0% |
| ! | TCCTTCATAGCTGTAGTTTT+GGG | - | chr4.1:62096131-62096150 | None:intergenic | 35.0% |
| ! | TGCTATCAGGTTTTCACTAT+CGG | + | chr4.1:62093422-62093441 | MS.gene72560:intron | 35.0% |
| ! | TGCTCTTTTACTCATGACTT+GGG | - | chr4.1:62097605-62097624 | None:intergenic | 35.0% |
| ! | TGGCTCAGAACCATAAATTT+TGG | - | chr4.1:62093150-62093169 | None:intergenic | 35.0% |
| ! | TTGCTCTTTTACTCATGACT+TGG | - | chr4.1:62097606-62097625 | None:intergenic | 35.0% |
| !! | AAAACTGTCCAGTATTGGTT+TGG | + | chr4.1:62096412-62096431 | MS.gene72560:intron | 35.0% |
| !! | AATTGTTTTGTAGGGACTTG+TGG | - | chr4.1:62095095-62095114 | None:intergenic | 35.0% |
| !! | CATGTTTTTGTCATTTGACG+AGG | - | chr4.1:62092790-62092809 | None:intergenic | 35.0% |
| !! | GGGTTATAGACATTTTGACA+CGG | + | chr4.1:62093124-62093143 | MS.gene72560:CDS | 35.0% |
| !!! | ACCCATGGTTTTAACTTTAC+AGG | - | chr4.1:62093857-62093876 | None:intergenic | 35.0% |
| !!! | GGTTTTAAAACTGGTTGTCA+AGG | - | chr4.1:62096917-62096936 | None:intergenic | 35.0% |
| !!! | GTTTGTTTTAATGCAGCAAC+AGG | - | chr4.1:62093272-62093291 | None:intergenic | 35.0% |
| !!! | TTTTGGTAGTGACAAACCAT+TGG | - | chr4.1:62093688-62093707 | None:intergenic | 35.0% |
| ACCATCGGATTATCCCAAAT+GGG | - | chr4.1:62094232-62094251 | None:intergenic | 40.0% | |
| AGAAAGCTGAGAAAGACATG+TGG | + | chr4.1:62094452-62094471 | MS.gene72560:CDS | 40.0% | |
| AGAACATGCGAGAAATCAGT+AGG | - | chr4.1:62095417-62095436 | None:intergenic | 40.0% | |
| AGACATAACGATTTGAGCTG+AGG | - | chr4.1:62095216-62095235 | None:intergenic | 40.0% | |
| ATCTTGAGACAACATGGGTA+GGG | + | chr4.1:62093918-62093937 | MS.gene72560:CDS | 40.0% | |
| ATGAAGATGGAGATGGAAGA+AGG | + | chr4.1:62095957-62095976 | MS.gene72560:intron | 40.0% | |
| ATGTGGATAGGCAGTAAAGA+GGG | - | chr4.1:62097276-62097295 | None:intergenic | 40.0% | |
| ATGTGTGTATGTATGCAGGT+GGG | + | chr4.1:62093104-62093123 | MS.gene72560:intron | 40.0% | |
| ATTCAACTTGACGTTGGAAG+AGG | - | chr4.1:62097679-62097698 | None:intergenic | 40.0% | |
| CAAAAACAGGAATCTGGACA+TGG | + | chr4.1:62093802-62093821 | MS.gene72560:intron | 40.0% | |
| CAAAACTACAGCTATGAAGG+AGG | + | chr4.1:62096130-62096149 | MS.gene72560:intron | 40.0% | |
| CACCAAATTGCAACAACCAA+TGG | + | chr4.1:62093669-62093688 | MS.gene72560:intron | 40.0% | |
| CTACATGGGAGAAGTAAAGA+GGG | + | chr4.1:62093199-62093218 | MS.gene72560:CDS | 40.0% | |
| CTATTGGATCACATGCTATC+AGG | + | chr4.1:62093409-62093428 | MS.gene72560:intron | 40.0% | |
| CTTCCATCTGAGTTAATCGA+TGG | - | chr4.1:62096789-62096808 | None:intergenic | 40.0% | |
| CTTCCTTGTATTTGACAGCT+CGG | - | chr4.1:62097313-62097332 | None:intergenic | 40.0% | |
| GAAAGTTTGAACATGTGGTC+AGG | + | chr4.1:62096281-62096300 | MS.gene72560:intron | 40.0% | |
| GAACATGCGAGAAATCAGTA+GGG | - | chr4.1:62095416-62095435 | None:intergenic | 40.0% | |
| GAATCTCAACCACAGACATA+AGG | + | chr4.1:62096739-62096758 | MS.gene72560:intron | 40.0% | |
| GACATAACGATTTGAGCTGA+GGG | - | chr4.1:62095215-62095234 | None:intergenic | 40.0% | |
| GCTTGGTTCATGGACATAAA+TGG | - | chr4.1:62093456-62093475 | None:intergenic | 40.0% | |
| GCTTTATAACCGATGTGGAT+AGG | - | chr4.1:62097288-62097307 | None:intergenic | 40.0% | |
| GGCCTGTAAAGTTAAAACCA+TGG | + | chr4.1:62093852-62093871 | MS.gene72560:CDS | 40.0% | |
| GGTTCATGGACATAAATGGT+GGG | - | chr4.1:62093452-62093471 | None:intergenic | 40.0% | |
| GTCTTGAAATGGGGTTATGT+AGG | + | chr4.1:62093951-62093970 | MS.gene72560:CDS | 40.0% | |
| GTGCTCCAAAATTCTTACGA+GGG | - | chr4.1:62096010-62096029 | None:intergenic | 40.0% | |
| TAAGTGCCAAATCCAATGAG+AGG | - | chr4.1:62092519-62092538 | None:intergenic | 40.0% | |
| TACACCTCCAGTTGTTAATC+AGG | + | chr4.1:62094033-62094052 | MS.gene72560:CDS | 40.0% | |
| TACTCATCACTACGACTTGT+AGG | - | chr4.1:62095565-62095584 | None:intergenic | 40.0% | |
| TATGTGTGTATGTATGCAGG+TGG | + | chr4.1:62093103-62093122 | MS.gene72560:intron | 40.0% | |
| TCCATGGAACCATCAAATCT+TGG | + | chr4.1:62096340-62096359 | MS.gene72560:intron | 40.0% | |
| TCTACATGGGAGAAGTAAAG+AGG | + | chr4.1:62093198-62093217 | MS.gene72560:CDS | 40.0% | |
| TCTCTAGCAACAAGATTGAG+TGG | + | chr4.1:62093993-62094012 | MS.gene72560:CDS | 40.0% | |
| TCTTGACATCCAAATTGTGG+GGG | + | chr4.1:62093231-62093250 | MS.gene72560:CDS | 40.0% | |
| TCTTTACTGCCTATCCACAT+CGG | + | chr4.1:62097276-62097295 | MS.gene72560:intron | 40.0% | |
| TGAAGATGGAGATGGAAGAA+GGG | + | chr4.1:62095958-62095977 | MS.gene72560:intron | 40.0% | |
| TGGATATGTACCTAGTGCAT+TGG | + | chr4.1:62093831-62093850 | MS.gene72560:CDS | 40.0% | |
| TGGTTCATGGACATAAATGG+TGG | - | chr4.1:62093453-62093472 | None:intergenic | 40.0% | |
| TGTCACACTGTTTGGACTAA+AGG | + | chr4.1:62096717-62096736 | MS.gene72560:intron | 40.0% | |
| TGTGCTCCAAAATTCTTACG+AGG | - | chr4.1:62096011-62096030 | None:intergenic | 40.0% | |
| TTAATGCAGCAACAGGATCA+TGG | - | chr4.1:62093265-62093284 | None:intergenic | 40.0% | |
| TTTATGGCATTGCCTAATGC+TGG | - | chr4.1:62093170-62093189 | None:intergenic | 40.0% | |
| ! | ACCAAGATTTGATGGTTCCA+TGG | - | chr4.1:62096344-62096363 | None:intergenic | 40.0% |
| ! | AGAGGGTACAAAAGGTTTAG+AGG | - | chr4.1:62097259-62097278 | None:intergenic | 40.0% |
| ! | CTCCTTCATAGCTGTAGTTT+TGG | - | chr4.1:62096132-62096151 | None:intergenic | 40.0% |
| ! | GAATCTGGACATGGACTATT+TGG | + | chr4.1:62093811-62093830 | MS.gene72560:CDS | 40.0% |
| ! | GCTATCAGGTTTTCACTATC+GGG | + | chr4.1:62093423-62093442 | MS.gene72560:intron | 40.0% |
| ! | GGCATCTAAAACTAAACCTC+TGG | + | chr4.1:62095931-62095950 | MS.gene72560:intron | 40.0% |
| ! | TGTCCATCGATTAACTCAGA+TGG | + | chr4.1:62096783-62096802 | MS.gene72560:intron | 40.0% |
| ! | TTTTGTAGGGACTTGTGGTT+TGG | - | chr4.1:62095090-62095109 | None:intergenic | 40.0% |
| !! | CCTTCATAGCTGTAGTTTTG+GGG | - | chr4.1:62096130-62096149 | None:intergenic | 40.0% |
| !! | GTATTCATGGTTTGGTGGTA+TGG | - | chr4.1:62096617-62096636 | None:intergenic | 40.0% |
| !!! | CAGTTTTAAAACCGGTTCGA+GGG | + | chr4.1:62096924-62096943 | MS.gene72560:intron | 40.0% |
| !!! | CGGTTTTGAGAGATTGAGTT+AGG | + | chr4.1:62093571-62093590 | MS.gene72560:intron | 40.0% |
| !!! | TTTTTTTTTTTGGCGTGGGG+TGG | + | chr4.1:62097840-62097859 | MS.gene72560:intron | 40.0% |
| AAACCTCTGGCACATGAAGA+TGG | + | chr4.1:62095944-62095963 | MS.gene72560:intron | 45.0% | |
| ACAACCAACACTATTGGGCT+TGG | - | chr4.1:62093473-62093492 | None:intergenic | 45.0% | |
| ACAATCCTCACCTCAGAAAC+CGG | + | chr4.1:62093551-62093570 | MS.gene72560:intron | 45.0% | |
| ACTTTACAGGCCAATGCACT+AGG | - | chr4.1:62093844-62093863 | None:intergenic | 45.0% | |
| AGGTGGAAATGCATCCTATG+TGG | + | chr4.1:62094423-62094442 | MS.gene72560:intron | 45.0% | |
| ATGCGAGAAATCAGTAGGGT+TGG | - | chr4.1:62095412-62095431 | None:intergenic | 45.0% | |
| ATGGGGTTATGTAGGTCCAT+TGG | + | chr4.1:62093959-62093978 | MS.gene72560:CDS | 45.0% | |
| ATGGTGTGGATGGTCAAAGT+TGG | - | chr4.1:62096107-62096126 | None:intergenic | 45.0% | |
| CAAGGGTTATGTCACTAGAG+AGG | - | chr4.1:62097125-62097144 | None:intergenic | 45.0% | |
| CACCATCGGATTATCCCAAA+TGG | - | chr4.1:62094233-62094252 | None:intergenic | 45.0% | |
| CCCCAAAACTACAGCTATGA+AGG | + | chr4.1:62096127-62096146 | MS.gene72560:intron | 45.0% | |
| CCCTCACAACCAACACTATT+GGG | - | chr4.1:62093478-62093497 | None:intergenic | 45.0% | |
| CTACCGAGCTGTCAAATACA+AGG | + | chr4.1:62097307-62097326 | MS.gene72560:intron | 45.0% | |
| CTAGTGACATAACCCTTGAG+TGG | + | chr4.1:62097127-62097146 | MS.gene72560:intron | 45.0% | |
| CTCATCCTCCAAACCTACTT+TGG | - | chr4.1:62095506-62095525 | None:intergenic | 45.0% | |
| GAGTCACCGCTAAGATCTAT+TGG | + | chr4.1:62093393-62093412 | MS.gene72560:intron | 45.0% | |
| GATCTTGAGACAACATGGGT+AGG | + | chr4.1:62093917-62093936 | MS.gene72560:CDS | 45.0% | |
| GATGTGGATAGGCAGTAAAG+AGG | - | chr4.1:62097277-62097296 | None:intergenic | 45.0% | |
| GGAACAGGATAGTTAACCCA+TGG | - | chr4.1:62093872-62093891 | None:intergenic | 45.0% | |
| TGAACCAAGCCCAATAGTGT+TGG | + | chr4.1:62093466-62093485 | MS.gene72560:intron | 45.0% | |
| TGGAAATGCATCCTATGTGG+AGG | + | chr4.1:62094426-62094445 | MS.gene72560:CDS | 45.0% | |
| TGGCCCTTAATTCCACTCAA+GGG | - | chr4.1:62097142-62097161 | None:intergenic | 45.0% | |
| TTGGCCCTTAATTCCACTCA+AGG | - | chr4.1:62097143-62097162 | None:intergenic | 45.0% | |
| ! | ACACTATTGGGCTTGGTTCA+TGG | - | chr4.1:62093466-62093485 | None:intergenic | 45.0% |
| ! | ACCCATTTGGGATAATCCGA+TGG | + | chr4.1:62094228-62094247 | MS.gene72560:intron | 45.0% |
| ! | ATGCGCCCTCGTAAGAATTT+TGG | + | chr4.1:62096002-62096021 | MS.gene72560:intron | 45.0% |
| ! | GGCAGTAAAGAGGGTACAAA+AGG | - | chr4.1:62097267-62097286 | None:intergenic | 45.0% |
| ! | TCTCTCAAAACCGGTTTCTG+AGG | - | chr4.1:62093564-62093583 | None:intergenic | 45.0% |
| ! | TGGGGTTGCTTTGTGTTTGA+AGG | - | chr4.1:62094579-62094598 | None:intergenic | 45.0% |
| !! | CAATAGTGTTGGTTGTGAGG+GGG | + | chr4.1:62093477-62093496 | MS.gene72560:intron | 45.0% |
| !! | CCAATAGTGTTGGTTGTGAG+GGG | + | chr4.1:62093476-62093495 | MS.gene72560:intron | 45.0% |
| !! | CCCAATAGTGTTGGTTGTGA+GGG | + | chr4.1:62093475-62093494 | MS.gene72560:intron | 45.0% |
| !! | CGGTAGCTTTATAACCGATG+TGG | - | chr4.1:62097293-62097312 | None:intergenic | 45.0% |
| !! | TATGGTTCTGAGCCAGCATT+AGG | + | chr4.1:62093155-62093174 | MS.gene72560:CDS | 45.0% |
| !! | TTAGTACCTCAAGGGCATTG+TGG | - | chr4.1:62092581-62092600 | None:intergenic | 45.0% |
| !!! | CATAGCTGTAGTTTTGGGGA+TGG | - | chr4.1:62096126-62096145 | None:intergenic | 45.0% |
| !!! | CCAGTTTTAAAACCGGTTCG+AGG | + | chr4.1:62096923-62096942 | MS.gene72560:intron | 45.0% |
| !!! | CCTCGAACCGGTTTTAAAAC+TGG | - | chr4.1:62096926-62096945 | None:intergenic | 45.0% |
| !! | AAAAAGTTAAAATATTTATA+GGG | + | chr4.1:62095776-62095795 | MS.gene72560:intron | 5.0% |
| !!! | AAAAATATATTTCATTTTTT+CGG | + | chr4.1:62095470-62095489 | MS.gene72560:intron | 5.0% |
| !!! | TATATTAATTTAAAATACAA+GGG | - | chr4.1:62092994-62093013 | None:intergenic | 5.0% |
| !!! | TTATATTAATTTAAAATACA+AGG | - | chr4.1:62092995-62093014 | None:intergenic | 5.0% |
| ACATGTGGTCAGGTCAACCA+TGG | + | chr4.1:62096291-62096310 | MS.gene72560:intron | 50.0% | |
| ACGTTGGAAGAGGATGATGC+TGG | - | chr4.1:62097669-62097688 | None:intergenic | 50.0% | |
| AGCTTTCTCTGCCTCCACAT+AGG | - | chr4.1:62094440-62094459 | None:intergenic | 50.0% | |
| CCCCTCACAACCAACACTAT+TGG | - | chr4.1:62093479-62093498 | None:intergenic | 50.0% | |
| CGAAAGGGATCGACTGAGTT+TGG | + | chr4.1:62096886-62096905 | MS.gene72560:intron | 50.0% | |
| CTCAACCACAGACATAAGGG+TGG | + | chr4.1:62096743-62096762 | MS.gene72560:intron | 50.0% | |
| CTGGCACATGAAGATGGAGA+TGG | + | chr4.1:62095950-62095969 | MS.gene72560:intron | 50.0% | |
| GTAAGTGCCTACTCACCACT+TGG | + | chr4.1:62094491-62094510 | MS.gene72560:CDS | 50.0% | |
| GTGATCACTCCCCCACAATT+TGG | - | chr4.1:62093243-62093262 | None:intergenic | 50.0% | |
| TCTCCATCTTCATGTGCCAG+AGG | - | chr4.1:62095950-62095969 | None:intergenic | 50.0% | |
| TCTGTCCACCCTTATGTCTG+TGG | - | chr4.1:62096751-62096770 | None:intergenic | 50.0% | |
| TGAGACAACATGGGTAGGGA+TGG | + | chr4.1:62093922-62093941 | MS.gene72560:CDS | 50.0% | |
| TGGAGATGGAAGAAGGGAGA+AGG | + | chr4.1:62095964-62095983 | MS.gene72560:intron | 50.0% | |
| !! | CAAAACCGGTTTCTGAGGTG+AGG | - | chr4.1:62093559-62093578 | None:intergenic | 50.0% |
| !! | GCCCAATAGTGTTGGTTGTG+AGG | + | chr4.1:62093474-62093493 | MS.gene72560:intron | 50.0% |
| !!! | AGTTTTGGGGATGGTGTGGA+TGG | - | chr4.1:62096117-62096136 | None:intergenic | 50.0% |
| !!! | CTGTAGTTTTGGGGATGGTG+TGG | - | chr4.1:62096121-62096140 | None:intergenic | 50.0% |
| ACACAAAGCAACCCCAGCAC+AGG | + | chr4.1:62094583-62094602 | MS.gene72560:CDS | 55.0% | |
| AGTGCCTACTCACCACTTGG+TGG | + | chr4.1:62094494-62094513 | MS.gene72560:CDS | 55.0% | |
| GTTGATCCCCATGCATTCCC+TGG | - | chr4.1:62094521-62094540 | None:intergenic | 55.0% | |
| TGCAGTCCACAATGCCCTTG+AGG | + | chr4.1:62092572-62092591 | MS.gene72560:CDS | 55.0% | |
| TGGTCCACCAAGTGGTGAGT+AGG | - | chr4.1:62094501-62094520 | None:intergenic | 55.0% | |
| ! | ACTCACCACTTGGTGGACCA+GGG | + | chr4.1:62094501-62094520 | MS.gene72560:CDS | 55.0% |
| ! | TACTCACCACTTGGTGGACC+AGG | + | chr4.1:62094500-62094519 | MS.gene72560:CDS | 55.0% |
| ! | TCTTACGAGGGCGCATGAGA+GGG | - | chr4.1:62095998-62096017 | None:intergenic | 55.0% |
| ! | TGGTGGACCAGGGAATGCAT+GGG | + | chr4.1:62094511-62094530 | MS.gene72560:CDS | 55.0% |
| ! | TTCTTACGAGGGCGCATGAG+AGG | - | chr4.1:62095999-62096018 | None:intergenic | 55.0% |
| ! | TTGGTGGACCAGGGAATGCA+TGG | + | chr4.1:62094510-62094529 | MS.gene72560:CDS | 55.0% |
| AGGGCGCGTGAGATGTGAGT+AGG | - | chr4.1:62095650-62095669 | None:intergenic | 60.0% | |
| CGCGTGAGATGTGAGTAGGG+TGG | - | chr4.1:62095646-62095665 | None:intergenic | 60.0% | |
| GCATTCCCTGGTCCACCAAG+TGG | - | chr4.1:62094509-62094528 | None:intergenic | 60.0% | |
| GGGCGCGTGAGATGTGAGTA+GGG | - | chr4.1:62095649-62095668 | None:intergenic | 60.0% | |
| GGTGGACCAGGGAATGCATG+GGG | + | chr4.1:62094512-62094531 | MS.gene72560:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 62092513 | 62098010 | 62092513 | ID=MS.gene72560 |
| chr4.1 | mRNA | 62092513 | 62098010 | 62092513 | ID=MS.gene72560.t1;Parent=MS.gene72560 |
| chr4.1 | exon | 62092513 | 62092593 | 62092513 | ID=MS.gene72560.t1.exon1;Parent=MS.gene72560.t1 |
| chr4.1 | CDS | 62092513 | 62092593 | 62092513 | ID=cds.MS.gene72560.t1;Parent=MS.gene72560.t1 |
| chr4.1 | exon | 62093122 | 62093297 | 62093122 | ID=MS.gene72560.t1.exon2;Parent=MS.gene72560.t1 |
| chr4.1 | CDS | 62093122 | 62093297 | 62093122 | ID=cds.MS.gene72560.t1;Parent=MS.gene72560.t1 |
| chr4.1 | exon | 62093811 | 62094054 | 62093811 | ID=MS.gene72560.t1.exon3;Parent=MS.gene72560.t1 |
| chr4.1 | CDS | 62093811 | 62094054 | 62093811 | ID=cds.MS.gene72560.t1;Parent=MS.gene72560.t1 |
| chr4.1 | exon | 62094425 | 62094604 | 62094425 | ID=MS.gene72560.t1.exon4;Parent=MS.gene72560.t1 |
| chr4.1 | CDS | 62094425 | 62094604 | 62094425 | ID=cds.MS.gene72560.t1;Parent=MS.gene72560.t1 |
| chr4.1 | exon | 62097963 | 62098010 | 62097963 | ID=MS.gene72560.t1.exon5;Parent=MS.gene72560.t1 |
| chr4.1 | CDS | 62097963 | 62098010 | 62097963 | ID=cds.MS.gene72560.t1;Parent=MS.gene72560.t1 |
| Gene Sequence |
| Protein sequence |
