Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97980.t1 | XP_013446222.1 | 97.8 | 319 | 7 | 0 | 1 | 319 | 1 | 319 | 1.20E-184 | 655.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97980.t1 | Q0PGJ6 | 75.4 | 321 | 71 | 3 | 1 | 319 | 1 | 315 | 1.2e-140 | 500.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97980.t1 | A0A072TRV0 | 97.8 | 319 | 7 | 0 | 1 | 319 | 1 | 319 | 8.5e-185 | 655.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene97980 | 0.80238 | 5.77E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene97980 | 0.80287 | 4.57E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene97980 | 0.809835 | 1.55E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene97980 | 0.830057 | 3.64E-55 | -1.69E-46 |
| MS.gene049369 | MS.gene97980 | 0.802752 | 4.83E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene97980 | 0.811515 | 6.74E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene97980 | 0.802219 | 6.22E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene97980 | 0.848478 | 5.98E-60 | -1.69E-46 |
| MS.gene051228 | MS.gene97980 | 0.828388 | 9.24E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene97980 | 0.811259 | 7.65E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene97980 | 0.813053 | 3.11E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene97980 | 0.800907 | 1.16E-48 | -1.69E-46 |
| MS.gene052872 | MS.gene97980 | 0.808556 | 2.92E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene97980 | 0.821297 | 4.35E-53 | -1.69E-46 |
| MS.gene053009 | MS.gene97980 | 0.800473 | 1.42E-48 | -1.69E-46 |
| MS.gene053104 | MS.gene97980 | 0.804923 | 1.71E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene97980 | 0.803933 | 2.75E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene97980 | 0.823074 | 1.68E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene97980 | 0.891005 | 5.89E-74 | -1.69E-46 |
| MS.gene054642 | MS.gene97980 | 0.842069 | 3.24E-58 | -1.69E-46 |
| MS.gene05494 | MS.gene97980 | 0.818311 | 2.09E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene97980 | 0.840593 | 7.92E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene97980 | 0.807999 | 3.84E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene97980 | 0.806291 | 8.83E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene97980 | 0.816995 | 4.15E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene97980 | 0.882486 | 1.00E-70 | -1.69E-46 |
| MS.gene056657 | MS.gene97980 | 0.827575 | 1.45E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene97980 | 0.80813 | 3.60E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene97980 | 0.817617 | 3.00E-52 | -1.69E-46 |
| MS.gene05735 | MS.gene97980 | 0.806221 | 9.14E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene97980 | 0.827269 | 1.72E-54 | -1.69E-46 |
| MS.gene058130 | MS.gene97980 | 0.800044 | 1.73E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene97980 | 0.818621 | 1.78E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene97980 | 0.843306 | 1.52E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene97980 | 0.802175 | 6.35E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene97980 | 0.805848 | 1.10E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene97980 | 0.827882 | 1.22E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene97980 | 0.829482 | 5.02E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene97980 | 0.838937 | 2.14E-57 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97980.t1 | MTR_8g070095 | 97.806 | 319 | 7 | 0 | 1 | 319 | 1 | 319 | 0.0 | 644 |
| MS.gene97980.t1 | MTR_8g070115 | 82.555 | 321 | 48 | 3 | 1 | 319 | 1 | 315 | 0.0 | 532 |
| MS.gene97980.t1 | MTR_4g021350 | 71.787 | 319 | 84 | 3 | 1 | 319 | 1 | 313 | 1.42e-160 | 451 |
| MS.gene97980.t1 | MTR_4g021350 | 72.852 | 291 | 73 | 3 | 1 | 291 | 1 | 285 | 8.20e-145 | 409 |
| MS.gene97980.t1 | MTR_4g021450 | 64.669 | 317 | 97 | 3 | 2 | 318 | 3 | 304 | 2.36e-140 | 399 |
| MS.gene97980.t1 | MTR_4g021410 | 64.669 | 317 | 97 | 3 | 2 | 318 | 3 | 304 | 2.67e-140 | 399 |
| MS.gene97980.t1 | MTR_7g063580 | 63.291 | 316 | 107 | 4 | 6 | 319 | 46 | 354 | 5.68e-136 | 390 |
| MS.gene97980.t1 | MTR_4g021410 | 65.108 | 278 | 84 | 2 | 41 | 318 | 3 | 267 | 3.46e-123 | 354 |
| MS.gene97980.t1 | MTR_4g021410 | 63.900 | 241 | 74 | 2 | 78 | 318 | 1 | 228 | 1.51e-100 | 295 |
| MS.gene97980.t1 | MTR_4g021450 | 63.071 | 241 | 76 | 2 | 78 | 318 | 1 | 228 | 3.61e-99 | 291 |
| MS.gene97980.t1 | MTR_4g072320 | 46.965 | 313 | 155 | 5 | 10 | 319 | 11 | 315 | 1.74e-91 | 275 |
| MS.gene97980.t1 | MTR_4g072350 | 46.645 | 313 | 160 | 5 | 10 | 318 | 11 | 320 | 6.61e-88 | 266 |
| MS.gene97980.t1 | MTR_4g072360 | 45.048 | 313 | 165 | 5 | 10 | 318 | 11 | 320 | 5.20e-86 | 261 |
| MS.gene97980.t1 | MTR_4g036845 | 41.667 | 312 | 176 | 3 | 10 | 319 | 8 | 315 | 1.95e-85 | 259 |
| MS.gene97980.t1 | MTR_4g021450 | 64.516 | 186 | 64 | 1 | 133 | 318 | 2 | 185 | 1.77e-84 | 253 |
| MS.gene97980.t1 | MTR_7g070500 | 44.904 | 314 | 162 | 7 | 8 | 318 | 15 | 320 | 8.16e-80 | 246 |
| MS.gene97980.t1 | MTR_6g073110 | 40.439 | 319 | 183 | 5 | 2 | 316 | 3 | 318 | 3.08e-79 | 244 |
| MS.gene97980.t1 | MTR_0374s0050 | 39.806 | 309 | 171 | 5 | 14 | 318 | 18 | 315 | 4.45e-75 | 233 |
| MS.gene97980.t1 | MTR_3g083130 | 40.196 | 306 | 171 | 4 | 15 | 318 | 20 | 315 | 1.50e-71 | 224 |
| MS.gene97980.t1 | MTR_7g070500 | 45.230 | 283 | 146 | 5 | 8 | 289 | 15 | 289 | 6.23e-71 | 222 |
| MS.gene97980.t1 | MTR_4g072060 | 41.096 | 292 | 158 | 5 | 10 | 291 | 5 | 292 | 5.95e-68 | 215 |
| MS.gene97980.t1 | MTR_5g097910 | 42.606 | 284 | 160 | 2 | 15 | 297 | 19 | 300 | 5.66e-66 | 210 |
| MS.gene97980.t1 | MTR_5g097900 | 42.606 | 284 | 160 | 2 | 15 | 297 | 19 | 300 | 5.66e-66 | 210 |
| MS.gene97980.t1 | MTR_5g097940 | 42.606 | 284 | 160 | 2 | 15 | 297 | 19 | 300 | 5.66e-66 | 210 |
| MS.gene97980.t1 | MTR_6g072650 | 40.667 | 150 | 64 | 3 | 171 | 318 | 10 | 136 | 5.78e-31 | 114 |
| MS.gene97980.t1 | MTR_6g072710 | 40.708 | 113 | 65 | 1 | 189 | 299 | 1 | 113 | 4.55e-24 | 95.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene97980.t1 | AT2G37770 | 75.389 | 321 | 71 | 3 | 1 | 319 | 1 | 315 | 3.64e-177 | 493 |
| MS.gene97980.t1 | AT2G37790 | 73.520 | 321 | 76 | 4 | 1 | 319 | 1 | 314 | 8.88e-171 | 476 |
| MS.gene97980.t1 | AT3G53880 | 68.224 | 321 | 94 | 4 | 1 | 319 | 1 | 315 | 7.59e-153 | 431 |
| MS.gene97980.t1 | AT2G37760 | 65.109 | 321 | 100 | 3 | 1 | 319 | 1 | 311 | 7.02e-150 | 423 |
| MS.gene97980.t1 | AT2G37760 | 65.109 | 321 | 100 | 3 | 1 | 319 | 1 | 311 | 7.02e-150 | 423 |
| MS.gene97980.t1 | AT2G37760 | 66.330 | 297 | 88 | 3 | 1 | 295 | 1 | 287 | 3.42e-139 | 395 |
| MS.gene97980.t1 | AT2G37760 | 66.330 | 297 | 88 | 3 | 1 | 295 | 1 | 287 | 3.42e-139 | 395 |
| MS.gene97980.t1 | AT2G37760 | 66.780 | 295 | 86 | 3 | 1 | 293 | 1 | 285 | 4.31e-139 | 395 |
| MS.gene97980.t1 | AT3G53880 | 68.027 | 294 | 86 | 4 | 1 | 292 | 1 | 288 | 3.61e-137 | 391 |
| MS.gene97980.t1 | AT2G37760 | 66.288 | 264 | 83 | 2 | 58 | 319 | 6 | 265 | 6.81e-123 | 353 |
| MS.gene97980.t1 | AT2G37760 | 66.288 | 264 | 83 | 2 | 58 | 319 | 6 | 265 | 6.81e-123 | 353 |
| MS.gene97980.t1 | AT2G37770 | 73.810 | 210 | 49 | 2 | 1 | 210 | 1 | 204 | 1.42e-108 | 317 |
| MS.gene97980.t1 | AT5G01670 | 45.455 | 319 | 163 | 7 | 3 | 318 | 11 | 321 | 8.87e-91 | 274 |
| MS.gene97980.t1 | AT5G62420 | 43.492 | 315 | 167 | 5 | 10 | 319 | 8 | 316 | 8.84e-86 | 261 |
| MS.gene97980.t1 | AT5G01670 | 41.908 | 346 | 163 | 8 | 3 | 318 | 11 | 348 | 5.49e-85 | 260 |
| MS.gene97980.t1 | AT2G21250 | 40.753 | 292 | 159 | 5 | 10 | 291 | 5 | 292 | 1.57e-74 | 232 |
| MS.gene97980.t1 | AT2G21260 | 39.384 | 292 | 163 | 5 | 10 | 291 | 5 | 292 | 8.53e-73 | 227 |
| MS.gene97980.t1 | AT1G59960 | 39.677 | 310 | 177 | 8 | 16 | 319 | 21 | 326 | 4.54e-70 | 221 |
| MS.gene97980.t1 | AT1G59950 | 40.968 | 310 | 173 | 8 | 16 | 319 | 15 | 320 | 1.30e-66 | 212 |
| MS.gene97980.t1 | AT2G21250 | 40.948 | 232 | 123 | 5 | 10 | 231 | 5 | 232 | 3.20e-56 | 182 |
| MS.gene97980.t1 | AT2G21260 | 36.073 | 219 | 128 | 4 | 83 | 291 | 8 | 224 | 1.18e-45 | 155 |
| MS.gene97980.t1 | AT1G06690 | 25.519 | 337 | 172 | 16 | 15 | 299 | 57 | 366 | 1.38e-14 | 74.3 |
| MS.gene97980.t1 | AT5G53580 | 22.747 | 233 | 136 | 7 | 97 | 300 | 145 | 362 | 7.79e-11 | 62.8 |
Find 95 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGATTGTGCTCAATTATA+TGG | 0.246265 | 8.4:+32976398 | MS.gene97980:CDS |
| AAGTGGAATGCCATCCTTCC+TGG | 0.316899 | 8.4:+32978084 | MS.gene97980:CDS |
| CTTCCGTCGGCTTGGGAACT+TGG | 0.318119 | 8.4:+32976216 | MS.gene97980:CDS |
| TGCTCAGGTAGCTCTTCGTT+GGG | 0.340720 | 8.4:+32978385 | MS.gene97980:CDS |
| CATTTAGAATTGGATGCTTA+AGG | 0.343408 | 8.4:-32978334 | None:intergenic |
| CAGATCTCTTGAAGAACTTT+GGG | 0.345354 | 8.4:+32978950 | MS.gene97980:CDS |
| GCCGTGAATTCGGCGCCTAT+TGG | 0.350788 | 8.4:-32977900 | None:intergenic |
| AATGCTAGTGGTACATCTTC+TGG | 0.366434 | 8.4:-32976699 | None:intergenic |
| ACAGATCTCTTGAAGAACTT+TGG | 0.367507 | 8.4:+32978949 | MS.gene97980:CDS |
| TCAAACAAACCAGAGTTTAG+AGG | 0.367679 | 8.4:-32976584 | None:intergenic |
| GGTCCTTTCTTTATCGCAAC+TGG | 0.368778 | 8.4:-32977879 | None:intergenic |
| ATGGAAGCACTGTATGATTC+TGG | 0.372421 | 8.4:+32977972 | MS.gene97980:CDS |
| TCAGCAACCTCATTTAGAAT+TGG | 0.373514 | 8.4:-32978344 | None:intergenic |
| AATTTAGCAAACAGGTCTTC+AGG | 0.375181 | 8.4:-32978494 | None:intergenic |
| ATAATGAAAATTTACCTTGA+TGG | 0.383153 | 8.4:-32976285 | None:intergenic |
| TTCCATTGCCTTCCATGTGC+TGG | 0.394884 | 8.4:-32977955 | None:intergenic |
| CTCTTGCTTGCAGATTGGCT+TGG | 0.397628 | 8.4:+32976507 | MS.gene97980:intron |
| CACCTTTGGGCTCCCCAACC+TGG | 0.398492 | 8.4:+32978297 | MS.gene97980:CDS |
| TCTTCGTTGGGGATTACAAA+TGG | 0.402510 | 8.4:+32978397 | MS.gene97980:CDS |
| TTCAGCCTTAGCCGTGAATT+CGG | 0.403381 | 8.4:-32977910 | None:intergenic |
| TCTCAGAAAATTTAGCAAAC+AGG | 0.415438 | 8.4:-32978502 | None:intergenic |
| TAGTGAAGCGCGAAGATTTG+TGG | 0.419049 | 8.4:+32976557 | MS.gene97980:CDS |
| AAGATCCCTTCCGTCGGCTT+GGG | 0.419341 | 8.4:+32976209 | MS.gene97980:CDS |
| TACAGAGAAGTGGACACCTT+TGG | 0.421647 | 8.4:-32978138 | None:intergenic |
| CAATTTCTCTATCAAGAAGT+TGG | 0.424383 | 8.4:+32978019 | MS.gene97980:CDS |
| ATCGAAGAATTGAATTGCCT+TGG | 0.425062 | 8.4:-32976171 | None:intergenic |
| CAAGCCGACGGAAGGGATCT+TGG | 0.426447 | 8.4:-32976207 | None:intergenic |
| CATCAGTATGAAGCCAGGTT+GGG | 0.428095 | 8.4:-32978310 | None:intergenic |
| TTCCATGTGCTGGCTAAGTT+AGG | 0.434208 | 8.4:-32977945 | None:intergenic |
| CTGCTCAGGTAGCTCTTCGT+TGG | 0.446657 | 8.4:+32978384 | MS.gene97980:CDS |
| TGGCAAGCCGAGGATGATCC+TGG | 0.450598 | 8.4:+32976236 | MS.gene97980:CDS |
| ACCAATAGGCGCCGAATTCA+CGG | 0.452350 | 8.4:+32977899 | MS.gene97980:CDS |
| TCTGGCAAGGCAAAGGCTAT+AGG | 0.456928 | 8.4:+32977990 | MS.gene97980:CDS |
| ACGGCTTCAGCAACGAGGCC+AGG | 0.464853 | 8.4:-32976254 | None:intergenic |
| CAAGATCCCTTCCGTCGGCT+TGG | 0.468615 | 8.4:+32976208 | MS.gene97980:CDS |
| AATTTCTCTATCAAGAAGTT+GGG | 0.469634 | 8.4:+32978020 | MS.gene97980:CDS |
| GCGATAAAGAAAGGACCAAT+AGG | 0.481557 | 8.4:+32977885 | MS.gene97980:CDS |
| AAGAGATCTGTAGGCACCAT+AGG | 0.482007 | 8.4:-32978937 | None:intergenic |
| TAAGCATCCAATTCTAAATG+AGG | 0.488314 | 8.4:+32978337 | MS.gene97980:CDS |
| ATGCCATCCTTCCTGGAGGC+AGG | 0.488471 | 8.4:+32978091 | MS.gene97980:CDS |
| CTTCGTTGGGGATTACAAAT+GGG | 0.488873 | 8.4:+32978398 | MS.gene97980:CDS |
| ACTAGCATTGGAAAAGACTT+TGG | 0.490609 | 8.4:+32976713 | MS.gene97980:CDS |
| GACGGAAGGGATCTTGGCTC+CGG | 0.493320 | 8.4:-32976201 | None:intergenic |
| CAACGAAGAGCTACCTGAGC+AGG | 0.497875 | 8.4:-32978383 | None:intergenic |
| AGAAGATGTACCACTAGCAT+TGG | 0.505834 | 8.4:+32976701 | MS.gene97980:CDS |
| TACCTTGATGGCGGTAGCAA+CGG | 0.508389 | 8.4:-32976273 | None:intergenic |
| GCGGAGTTTGTCCTGCCTCC+AGG | 0.509330 | 8.4:-32978102 | None:intergenic |
| AATGAGGTTGCTGAGAAACT+AGG | 0.513727 | 8.4:+32978353 | MS.gene97980:CDS |
| ACATCAGTATGAAGCCAGGT+TGG | 0.521356 | 8.4:-32978311 | None:intergenic |
| ACTAGGAAAGTCTCCTGCTC+AGG | 0.527210 | 8.4:+32978370 | MS.gene97980:CDS |
| ATCAGTATGAAGCCAGGTTG+GGG | 0.529291 | 8.4:-32978309 | None:intergenic |
| CGCGATTTCTGCAATTCCAA+AGG | 0.530051 | 8.4:+32978122 | MS.gene97980:CDS |
| ACAAATCAACGTAATCAAGC+TGG | 0.534843 | 8.4:-32976743 | None:intergenic |
| TCCTCCTGCTGTCAATCAAG+TGG | 0.537498 | 8.4:+32978067 | MS.gene97980:CDS |
| CATTCCACTTGATTGACAGC+AGG | 0.544893 | 8.4:-32978071 | None:intergenic |
| TGGCCAGTTGCGATAAAGAA+AGG | 0.545205 | 8.4:+32977876 | MS.gene97980:CDS |
| CAAGTTCCCAAGCCGACGGA+AGG | 0.545920 | 8.4:-32976215 | None:intergenic |
| TGTGGATTACCTCTAAACTC+TGG | 0.549050 | 8.4:+32976575 | MS.gene97980:CDS |
| TGTCCTGCCTCCAGGAAGGA+TGG | 0.550318 | 8.4:-32978094 | None:intergenic |
| TCTTTATCGCAACTGGCCAG+TGG | 0.553959 | 8.4:-32977872 | None:intergenic |
| TTGAAGAAGCTGTTCGATGA+GGG | 0.555129 | 8.4:+32976532 | MS.gene97980:CDS |
| GTTACAGGCAAGATTACTGA+AGG | 0.557541 | 8.4:+32978893 | MS.gene97980:intron |
| ATATTTGTTCATGAAACCTA+TGG | 0.561345 | 8.4:+32978921 | MS.gene97980:CDS |
| CTTGGAAACTTACAGAGAAG+TGG | 0.563953 | 8.4:-32978148 | None:intergenic |
| AGGCGCCGAATTCACGGCTA+AGG | 0.570557 | 8.4:+32977905 | MS.gene97980:CDS |
| AAGTTCTTCAAGAGATCTGT+AGG | 0.572206 | 8.4:-32978946 | None:intergenic |
| GTATGATTCTGGCAAGGCAA+AGG | 0.574046 | 8.4:+32977983 | MS.gene97980:CDS |
| CTTGGGAACTTGGCAAGCCG+AGG | 0.575922 | 8.4:+32976226 | MS.gene97980:CDS |
| AACGAGGCCAGGATCATCCT+CGG | 0.577836 | 8.4:-32976243 | None:intergenic |
| AGCCGTTGCTACCGCCATCA+AGG | 0.579549 | 8.4:+32976271 | MS.gene97980:CDS |
| TCCACTTGATTGACAGCAGG+AGG | 0.589599 | 8.4:-32978068 | None:intergenic |
| AAGGACATCAGTATGAAGCC+AGG | 0.592213 | 8.4:-32978315 | None:intergenic |
| TCTCTTGAAGAACTTTGGGA+TGG | 0.592262 | 8.4:+32978954 | MS.gene97980:CDS |
| TAACTTAGCCAGCACATGGA+AGG | 0.594297 | 8.4:+32977947 | MS.gene97980:CDS |
| CAATTCTTCGATCTCAACAC+CGG | 0.596191 | 8.4:+32976182 | MS.gene97980:CDS |
| AAGTTCCCAAGCCGACGGAA+GGG | 0.599376 | 8.4:-32976214 | None:intergenic |
| AACTTGCTTGACAATGTCCA+AGG | 0.603582 | 8.4:+32976154 | None:intergenic |
| ATGAAAATTTACCTTGATGG+CGG | 0.606141 | 8.4:-32976282 | None:intergenic |
| TACCTAACTTAGCCAGCACA+TGG | 0.612895 | 8.4:+32977943 | MS.gene97980:CDS |
| AGCCAGCACATGGAAGGCAA+TGG | 0.615743 | 8.4:+32977953 | MS.gene97980:CDS |
| AGTTTGTCCTGCCTCCAGGA+AGG | 0.624277 | 8.4:-32978098 | None:intergenic |
| TCAATTATATGGCAATCAGA+AGG | 0.624823 | 8.4:+32976409 | MS.gene97980:CDS |
| GCTCAGGTAGCTCTTCGTTG+GGG | 0.625808 | 8.4:+32978386 | MS.gene97980:CDS |
| CTTTGGAATTGCAGAAATCG+CGG | 0.626868 | 8.4:-32978121 | None:intergenic |
| ATTGAGCACAATCAATATGA+CGG | 0.629044 | 8.4:-32976391 | None:intergenic |
| TTGCCAAGTTCCCAAGCCGA+CGG | 0.633068 | 8.4:-32976219 | None:intergenic |
| GGAGCCAAGATCCCTTCCGT+CGG | 0.642083 | 8.4:+32976203 | MS.gene97980:CDS |
| AGCCAGGTTGGGGAGCCCAA+AGG | 0.650642 | 8.4:-32978299 | None:intergenic |
| ATTATATGGCAATCAGAAGG+AGG | 0.657917 | 8.4:+32976412 | MS.gene97980:CDS |
| GTTGAAGAAGCTGTTCGATG+AGG | 0.666380 | 8.4:+32976531 | MS.gene97980:CDS |
| AGCACTGTATGATTCTGGCA+AGG | 0.668190 | 8.4:+32977977 | MS.gene97980:CDS |
| TTACAGGCAAGATTACTGAA+GGG | 0.677089 | 8.4:+32978894 | MS.gene97980:intron |
| GAAGTTGGGAGATTTGCTCG+AGG | 0.688084 | 8.4:+32978034 | MS.gene97980:CDS |
| TAGCAACGGCTTCAGCAACG+AGG | 0.714364 | 8.4:-32976259 | None:intergenic |
| TGGAATGCCATCCTTCCTGG+AGG | 0.726179 | 8.4:+32978087 | MS.gene97980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTACTAAAACTATAATTT+TGG | + | chr8.4:32977656-32977675 | MS.gene97980:intron | 10.0% |
| !!! | ATATAGGTTTTTTTTTTTAA+TGG | - | chr8.4:32978811-32978830 | None:intergenic | 10.0% |
| !!! | ATTACTAAAACTATAATTTT+GGG | + | chr8.4:32977657-32977676 | MS.gene97980:intron | 10.0% |
| !!! | TAGTATGTTATTTTATAATT+TGG | + | chr8.4:32977172-32977191 | MS.gene97980:intron | 10.0% |
| !! | ACTATAAGAATAAAATATGA+CGG | + | chr8.4:32977534-32977553 | MS.gene97980:intron | 15.0% |
| !! | TAAAAAATAAAAATGTTTGG+TGG | - | chr8.4:32977142-32977161 | None:intergenic | 15.0% |
| !! | TTTCATCTAATTTCAAAATT+TGG | + | chr8.4:32977783-32977802 | MS.gene97980:intron | 15.0% |
| !!! | ACAATATGATATTTTTTTGA+GGG | - | chr8.4:32977242-32977261 | None:intergenic | 15.0% |
| !!! | ACATAGTCTTTAATTTTATT+AGG | + | chr8.4:32977689-32977708 | MS.gene97980:intron | 15.0% |
| !!! | ATATTTTATTTGATACATAC+AGG | + | chr8.4:32976361-32976380 | MS.gene97980:intron | 15.0% |
| !!! | ATTATTTTCTGTAATGTTTT+AGG | + | chr8.4:32978268-32978287 | MS.gene97980:intron | 15.0% |
| !!! | TACAATATGATATTTTTTTG+AGG | - | chr8.4:32977243-32977262 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTTGAAAGGATA+TGG | + | chr8.4:32977559-32977578 | MS.gene97980:intron | 15.0% |
| !!! | TCTTAAACATTTTAGTTTTT+AGG | + | chr8.4:32977297-32977316 | MS.gene97980:intron | 15.0% |
| !!! | TTATTTTCTGTAATGTTTTA+GGG | + | chr8.4:32978269-32978288 | MS.gene97980:intron | 15.0% |
| !! | ATAATGAAAATTTACCTTGA+TGG | - | chr8.4:32976288-32976307 | None:intergenic | 20.0% |
| !! | ATATATTTCCAAAACTTAAG+TGG | - | chr8.4:32976312-32976331 | None:intergenic | 20.0% |
| !! | GCAAAAATATAATGACTTAT+TGG | - | chr8.4:32978248-32978267 | None:intergenic | 20.0% |
| !! | TATATACCACAAGTTTATAA+TGG | - | chr8.4:32977038-32977057 | None:intergenic | 20.0% |
| !! | TTAATACATACAATTTGTGA+AGG | + | chr8.4:32976464-32976483 | MS.gene97980:intron | 20.0% |
| !!! | AAAACTTTGATGTTTTTGAT+TGG | + | chr8.4:32978465-32978484 | MS.gene97980:CDS | 20.0% |
| !!! | AACAGGTATATAGTATTTTA+TGG | + | chr8.4:32978528-32978547 | MS.gene97980:intron | 20.0% |
| !!! | AATGAATCTTTTGGTAATTA+AGG | - | chr8.4:32977409-32977428 | None:intergenic | 20.0% |
| !!! | ACGGTATATTTTTTTTTGAA+AGG | + | chr8.4:32977553-32977572 | MS.gene97980:intron | 20.0% |
| !!! | CTTTTCTTACTCAATATATT+GGG | + | chr8.4:32977274-32977293 | MS.gene97980:intron | 20.0% |
| ! | AAATCTATGAAGCATGAATA+TGG | - | chr8.4:32976882-32976901 | None:intergenic | 25.0% |
| ! | AAGAAGAACTTCAACAATAT+AGG | - | chr8.4:32978827-32978846 | None:intergenic | 25.0% |
| ! | AATTAGATGAAATAAACCCT+AGG | - | chr8.4:32977775-32977794 | None:intergenic | 25.0% |
| ! | AATTTCTCTATCAAGAAGTT+GGG | + | chr8.4:32978020-32978039 | MS.gene97980:CDS | 25.0% |
| ! | ATATTTGTTCATGAAACCTA+TGG | + | chr8.4:32978921-32978940 | MS.gene97980:CDS | 25.0% |
| ! | ATTGATTGTGCTCAATTATA+TGG | + | chr8.4:32976398-32976417 | MS.gene97980:CDS | 25.0% |
| ! | CATCTAATTTCAAAATTTGG+TGG | + | chr8.4:32977786-32977805 | MS.gene97980:intron | 25.0% |
| ! | TCCTATGTAAAATTGTGAAT+TGG | - | chr8.4:32977508-32977527 | None:intergenic | 25.0% |
| ! | TTAGTTGTTACGTTAGAAAT+AGG | - | chr8.4:32978782-32978801 | None:intergenic | 25.0% |
| !! | CTTTTTCCATTATAAACTTG+TGG | + | chr8.4:32977029-32977048 | MS.gene97980:intron | 25.0% |
| !! | GCTTTTCTTACTCAATATAT+TGG | + | chr8.4:32977273-32977292 | MS.gene97980:intron | 25.0% |
| !! | TCATTATTCCACTTAAGTTT+TGG | + | chr8.4:32976301-32976320 | MS.gene97980:intron | 25.0% |
| !! | TCCAATTCACAATTTTACAT+AGG | + | chr8.4:32977504-32977523 | MS.gene97980:intron | 25.0% |
| !! | TGAAAAAGAAAGTGAGATTT+TGG | + | chr8.4:32977357-32977376 | MS.gene97980:intron | 25.0% |
| !! | TGATTTTCTCAAATTATCAG+CGG | + | chr8.4:32976828-32976847 | MS.gene97980:intron | 25.0% |
| !!! | ATTGTCTAGTTTTATGACAA+TGG | + | chr8.4:32978862-32978881 | MS.gene97980:intron | 25.0% |
| !!! | CTTTTGGTAATTAAGGATTA+GGG | - | chr8.4:32977402-32977421 | None:intergenic | 25.0% |
| !!! | TAAATTTTCTGAGATTGAAC+AGG | + | chr8.4:32978511-32978530 | MS.gene97980:CDS | 25.0% |
| !!! | TCTTTTGGTAATTAAGGATT+AGG | - | chr8.4:32977403-32977422 | None:intergenic | 25.0% |
| ACTTGTGGTATATAGCAATA+TGG | + | chr8.4:32977044-32977063 | MS.gene97980:intron | 30.0% | |
| ATGAAAATTTACCTTGATGG+CGG | - | chr8.4:32976285-32976304 | None:intergenic | 30.0% | |
| ATTGAGCACAATCAATATGA+CGG | - | chr8.4:32976394-32976413 | None:intergenic | 30.0% | |
| CAATTTCTCTATCAAGAAGT+TGG | + | chr8.4:32978019-32978038 | MS.gene97980:CDS | 30.0% | |
| CTTATTGGAAGAAAGAGAAA+AGG | - | chr8.4:32978233-32978252 | None:intergenic | 30.0% | |
| GAAGTTCTTCTTTACTTTCA+TGG | + | chr8.4:32978835-32978854 | MS.gene97980:intron | 30.0% | |
| GACATACTCAATTTAACTGA+TGG | + | chr8.4:32977833-32977852 | MS.gene97980:intron | 30.0% | |
| TAACAAAAATGCAACGTATG+AGG | - | chr8.4:32977462-32977481 | None:intergenic | 30.0% | |
| TAAGCATCCAATTCTAAATG+AGG | + | chr8.4:32978337-32978356 | MS.gene97980:CDS | 30.0% | |
| TCAATTATATGGCAATCAGA+AGG | + | chr8.4:32976409-32976428 | MS.gene97980:CDS | 30.0% | |
| TCTCAGAAAATTTAGCAAAC+AGG | - | chr8.4:32978505-32978524 | None:intergenic | 30.0% | |
| TGATCATTCAAGAAAAGACT+TGG | - | chr8.4:32978169-32978188 | None:intergenic | 30.0% | |
| TTCATGGTGAAATTGTGAAT+TGG | - | chr8.4:32977434-32977453 | None:intergenic | 30.0% | |
| TTTATTTGATACATACAGGC+TGG | + | chr8.4:32976365-32976384 | MS.gene97980:intron | 30.0% | |
| ! | ACAATGGCTTTTATTGTTAC+AGG | + | chr8.4:32978878-32978897 | MS.gene97980:intron | 30.0% |
| ! | AGAAGTAGCATTTTCCTTTA+TGG | + | chr8.4:32978738-32978757 | MS.gene97980:intron | 30.0% |
| ! | CATTTAGAATTGGATGCTTA+AGG | - | chr8.4:32978337-32978356 | None:intergenic | 30.0% |
| ! | GAATTGGACAATGAATCTTT+TGG | - | chr8.4:32977418-32977437 | None:intergenic | 30.0% |
| !! | AGATTTTGGTCTACGATTTA+TGG | + | chr8.4:32977371-32977390 | MS.gene97980:intron | 30.0% |
| !! | CAAAAATTTAGTCTTGGATC+CGG | + | chr8.4:32977749-32977768 | MS.gene97980:intron | 30.0% |
| !! | CACAGTTGGCAAATTTTAAT+TGG | - | chr8.4:32978687-32978706 | None:intergenic | 30.0% |
| !! | CACTTTCTTTTTCACAACAA+AGG | - | chr8.4:32977351-32977370 | None:intergenic | 30.0% |
| !!! | AGAATTTTTCAAGACACAGT+TGG | - | chr8.4:32978701-32978720 | None:intergenic | 30.0% |
| !!! | CTTTTTTCATTTGCACTCTT+GGG | - | chr8.4:32978437-32978456 | None:intergenic | 30.0% |
| !!! | TTTTAGGGTTATTCACCTTT+GGG | + | chr8.4:32978284-32978303 | MS.gene97980:intron | 30.0% |
| AACGTATGAGGATGAATTCA+TGG | - | chr8.4:32977450-32977469 | None:intergenic | 35.0% | |
| AAGTTCTTCAAGAGATCTGT+AGG | - | chr8.4:32978949-32978968 | None:intergenic | 35.0% | |
| AATAAGATGATGTGCACTGT+AGG | + | chr8.4:32976661-32976680 | MS.gene97980:intron | 35.0% | |
| AATTTAGCAAACAGGTCTTC+AGG | - | chr8.4:32978497-32978516 | None:intergenic | 35.0% | |
| ACAAATCAACGTAATCAAGC+TGG | - | chr8.4:32976746-32976765 | None:intergenic | 35.0% | |
| ACAGATCTCTTGAAGAACTT+TGG | + | chr8.4:32978949-32978968 | MS.gene97980:CDS | 35.0% | |
| ATCGAAGAATTGAATTGCCT+TGG | - | chr8.4:32976174-32976193 | None:intergenic | 35.0% | |
| ATTATATGGCAATCAGAAGG+AGG | + | chr8.4:32976412-32976431 | MS.gene97980:CDS | 35.0% | |
| CAGATCTCTTGAAGAACTTT+GGG | + | chr8.4:32978950-32978969 | MS.gene97980:CDS | 35.0% | |
| TCAAACAAACCAGAGTTTAG+AGG | - | chr8.4:32976587-32976606 | None:intergenic | 35.0% | |
| TCACGCCAAAAATTTAGTCT+TGG | + | chr8.4:32977743-32977762 | MS.gene97980:intron | 35.0% | |
| TTAATGACCACTCAGTATGA+AGG | + | chr8.4:32977098-32977117 | MS.gene97980:intron | 35.0% | |
| TTACAGGCAAGATTACTGAA+GGG | + | chr8.4:32978894-32978913 | MS.gene97980:intron | 35.0% | |
| ! | AAAGTCTTTTCCAATGCTAG+TGG | - | chr8.4:32976714-32976733 | None:intergenic | 35.0% |
| ! | ACTAGCATTGGAAAAGACTT+TGG | + | chr8.4:32976713-32976732 | MS.gene97980:CDS | 35.0% |
| ! | CCAAGAGTGCAAATGAAAAA+AGG | + | chr8.4:32978435-32978454 | MS.gene97980:CDS | 35.0% |
| ! | CGGATCCAAGACTAAATTTT+TGG | - | chr8.4:32977751-32977770 | None:intergenic | 35.0% |
| ! | TCAGCAACCTCATTTAGAAT+TGG | - | chr8.4:32978347-32978366 | None:intergenic | 35.0% |
| !!! | CCTTTTTTCATTTGCACTCT+TGG | - | chr8.4:32978438-32978457 | None:intergenic | 35.0% |
| !!! | GTTTTAGGGTTATTCACCTT+TGG | + | chr8.4:32978283-32978302 | MS.gene97980:intron | 35.0% |
| AATGAGGTTGCTGAGAAACT+AGG | + | chr8.4:32978353-32978372 | MS.gene97980:CDS | 40.0% | |
| AATGATCAGAACCAAGCAGT+AGG | - | chr8.4:32976916-32976935 | None:intergenic | 40.0% | |
| AATGCTAGTGGTACATCTTC+TGG | - | chr8.4:32976702-32976721 | None:intergenic | 40.0% | |
| AGAAATAGGTGTGTAGACCT+AGG | - | chr8.4:32978768-32978787 | None:intergenic | 40.0% | |
| AGAAGATGTACCACTAGCAT+TGG | + | chr8.4:32976701-32976720 | MS.gene97980:CDS | 40.0% | |
| AGATGAAATAAACCCTAGGC+CGG | - | chr8.4:32977771-32977790 | None:intergenic | 40.0% | |
| CAATTCTTCGATCTCAACAC+CGG | + | chr8.4:32976182-32976201 | MS.gene97980:CDS | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | + | chr8.4:32978625-32978644 | MS.gene97980:intron | 40.0% | |
| CTTCGTTGGGGATTACAAAT+GGG | + | chr8.4:32978398-32978417 | MS.gene97980:CDS | 40.0% | |
| CTTGGAAACTTACAGAGAAG+TGG | - | chr8.4:32978151-32978170 | None:intergenic | 40.0% | |
| GAAATAGGTGTGTAGACCTA+GGG | - | chr8.4:32978767-32978786 | None:intergenic | 40.0% | |
| GAAATCTGTTGTACACTGCT+TGG | + | chr8.4:32976966-32976985 | MS.gene97980:intron | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | + | chr8.4:32978622-32978641 | MS.gene97980:intron | 40.0% | |
| GCGATAAAGAAAGGACCAAT+AGG | + | chr8.4:32977885-32977904 | MS.gene97980:CDS | 40.0% | |
| GGCAAATAGTGCATTGTGAT+TGG | - | chr8.4:32978614-32978633 | None:intergenic | 40.0% | |
| GTTACAGGCAAGATTACTGA+AGG | + | chr8.4:32978893-32978912 | MS.gene97980:intron | 40.0% | |
| TAATAGACTGCATGTGTGCT+TGG | + | chr8.4:32976990-32977009 | MS.gene97980:intron | 40.0% | |
| TCGTATATTCTCCTACTGCT+TGG | + | chr8.4:32976902-32976921 | MS.gene97980:intron | 40.0% | |
| TCTTCGTTGGGGATTACAAA+TGG | + | chr8.4:32978397-32978416 | MS.gene97980:CDS | 40.0% | |
| TGTGGCTGAAAAATAGGAAG+TGG | + | chr8.4:32978648-32978667 | MS.gene97980:intron | 40.0% | |
| TTCTTCTCTTGCTTGCAGAT+TGG | + | chr8.4:32976502-32976521 | MS.gene97980:intron | 40.0% | |
| TTGAAGAAGCTGTTCGATGA+GGG | + | chr8.4:32976532-32976551 | MS.gene97980:CDS | 40.0% | |
| ! | TCTCTTGAAGAACTTTGGGA+TGG | + | chr8.4:32978954-32978973 | MS.gene97980:CDS | 40.0% |
| ! | TGTGGATTACCTCTAAACTC+TGG | + | chr8.4:32976575-32976594 | MS.gene97980:CDS | 40.0% |
| ! | TTCTTCCTTTTCAGATCCAC+TGG | + | chr8.4:32977856-32977875 | MS.gene97980:intron | 40.0% |
| ! | TTTTCCTTTATGGTTGCCCT+AGG | + | chr8.4:32978748-32978767 | MS.gene97980:intron | 40.0% |
| !! | ATGGAAGCACTGTATGATTC+TGG | + | chr8.4:32977972-32977991 | MS.gene97980:CDS | 40.0% |
| !! | CTTTGGAATTGCAGAAATCG+CGG | - | chr8.4:32978124-32978143 | None:intergenic | 40.0% |
| AAGAGATCTGTAGGCACCAT+AGG | - | chr8.4:32978940-32978959 | None:intergenic | 45.0% | |
| AAGGACATCAGTATGAAGCC+AGG | - | chr8.4:32978318-32978337 | None:intergenic | 45.0% | |
| ACATCAGTATGAAGCCAGGT+TGG | - | chr8.4:32978314-32978333 | None:intergenic | 45.0% | |
| AGCACTGTATGATTCTGGCA+AGG | + | chr8.4:32977977-32977996 | MS.gene97980:CDS | 45.0% | |
| ATCAGTATGAAGCCAGGTTG+GGG | - | chr8.4:32978312-32978331 | None:intergenic | 45.0% | |
| ATGACCACTCAGTATGAAGG+TGG | + | chr8.4:32977101-32977120 | MS.gene97980:intron | 45.0% | |
| CATCAGTATGAAGCCAGGTT+GGG | - | chr8.4:32978313-32978332 | None:intergenic | 45.0% | |
| CATTAAGTCTGCAAGGCACA+TGG | - | chr8.4:32977084-32977103 | None:intergenic | 45.0% | |
| CATTCCACTTGATTGACAGC+AGG | - | chr8.4:32978074-32978093 | None:intergenic | 45.0% | |
| CGCGATTTCTGCAATTCCAA+AGG | + | chr8.4:32978122-32978141 | MS.gene97980:CDS | 45.0% | |
| GAGTGGTCATTAAGTCTGCA+AGG | - | chr8.4:32977091-32977110 | None:intergenic | 45.0% | |
| GGTCCTTTCTTTATCGCAAC+TGG | - | chr8.4:32977882-32977901 | None:intergenic | 45.0% | |
| GTATGATTCTGGCAAGGCAA+AGG | + | chr8.4:32977983-32978002 | MS.gene97980:CDS | 45.0% | |
| GTTGAAGAAGCTGTTCGATG+AGG | + | chr8.4:32976531-32976550 | MS.gene97980:CDS | 45.0% | |
| TAACTTAGCCAGCACATGGA+AGG | + | chr8.4:32977947-32977966 | MS.gene97980:CDS | 45.0% | |
| TACAGAGAAGTGGACACCTT+TGG | - | chr8.4:32978141-32978160 | None:intergenic | 45.0% | |
| TACCTAACTTAGCCAGCACA+TGG | + | chr8.4:32977943-32977962 | MS.gene97980:CDS | 45.0% | |
| TAGACCTAGGGCAACCATAA+AGG | - | chr8.4:32978755-32978774 | None:intergenic | 45.0% | |
| TAGTGAAGCGCGAAGATTTG+TGG | + | chr8.4:32976557-32976576 | MS.gene97980:CDS | 45.0% | |
| TGGCCAGTTGCGATAAAGAA+AGG | + | chr8.4:32977876-32977895 | MS.gene97980:CDS | 45.0% | |
| TTCAGCCTTAGCCGTGAATT+CGG | - | chr8.4:32977913-32977932 | None:intergenic | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | + | chr8.4:32978642-32978661 | MS.gene97980:intron | 45.0% |
| ! | GTTTGGTGGAACGTCTTTAC+TGG | - | chr8.4:32977128-32977147 | None:intergenic | 45.0% |
| !! | TTCCATGTGCTGGCTAAGTT+AGG | - | chr8.4:32977948-32977967 | None:intergenic | 45.0% |
| !! | AAATAAAAAATAAAAATGTT+TGG | - | chr8.4:32977145-32977164 | None:intergenic | 5.0% |
| AAGTGGAATGCCATCCTTCC+TGG | + | chr8.4:32978084-32978103 | MS.gene97980:CDS | 50.0% | |
| ACTAGGAAAGTCTCCTGCTC+AGG | + | chr8.4:32978370-32978389 | MS.gene97980:CDS | 50.0% | |
| ACTGGCCAGTGGATCTGAAA+AGG | - | chr8.4:32977864-32977883 | None:intergenic | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | - | chr8.4:32978635-32978654 | None:intergenic | 50.0% | |
| GCATGAATATGGTCACGACG+CGG | - | chr8.4:32976871-32976890 | None:intergenic | 50.0% | |
| TCCACTTGATTGACAGCAGG+AGG | - | chr8.4:32978071-32978090 | None:intergenic | 50.0% | |
| TCCTCCTGCTGTCAATCAAG+TGG | + | chr8.4:32978067-32978086 | MS.gene97980:CDS | 50.0% | |
| TCTGGCAAGGCAAAGGCTAT+AGG | + | chr8.4:32977990-32978009 | MS.gene97980:CDS | 50.0% | |
| TCTTTATCGCAACTGGCCAG+TGG | - | chr8.4:32977875-32977894 | None:intergenic | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | + | chr8.4:32978630-32978649 | MS.gene97980:intron | 50.0% | |
| TGCTCAGGTAGCTCTTCGTT+GGG | + | chr8.4:32978385-32978404 | MS.gene97980:CDS | 50.0% | |
| TGGTCCACCTTCATACTGAG+TGG | - | chr8.4:32977108-32977127 | None:intergenic | 50.0% | |
| TTCCATTGCCTTCCATGTGC+TGG | - | chr8.4:32977958-32977977 | None:intergenic | 50.0% | |
| ! | CTCTTGCTTGCAGATTGGCT+TGG | + | chr8.4:32976507-32976526 | MS.gene97980:intron | 50.0% |
| ! | GAAGTTGGGAGATTTGCTCG+AGG | + | chr8.4:32978034-32978053 | MS.gene97980:CDS | 50.0% |
| !! | ACCAATAGGCGCCGAATTCA+CGG | + | chr8.4:32977899-32977918 | MS.gene97980:CDS | 50.0% |
| !! | TACCTTGATGGCGGTAGCAA+CGG | - | chr8.4:32976276-32976295 | None:intergenic | 50.0% |
| !! | TTAGTCTTGGATCCGGCCTA+GGG | + | chr8.4:32977756-32977775 | MS.gene97980:intron | 50.0% |
| !! | TTTAGTCTTGGATCCGGCCT+AGG | + | chr8.4:32977755-32977774 | MS.gene97980:intron | 50.0% |
| AACGAGGCCAGGATCATCCT+CGG | - | chr8.4:32976246-32976265 | None:intergenic | 55.0% | |
| AAGTTCCCAAGCCGACGGAA+GGG | - | chr8.4:32976217-32976236 | None:intergenic | 55.0% | |
| AGCCAGCACATGGAAGGCAA+TGG | + | chr8.4:32977953-32977972 | MS.gene97980:CDS | 55.0% | |
| AGTTTGTCCTGCCTCCAGGA+AGG | - | chr8.4:32978101-32978120 | None:intergenic | 55.0% | |
| CAACGAAGAGCTACCTGAGC+AGG | - | chr8.4:32978386-32978405 | None:intergenic | 55.0% | |
| CTGCTCAGGTAGCTCTTCGT+TGG | + | chr8.4:32978384-32978403 | MS.gene97980:CDS | 55.0% | |
| GCTCAGGTAGCTCTTCGTTG+GGG | + | chr8.4:32978386-32978405 | MS.gene97980:CDS | 55.0% | |
| TAGCAACGGCTTCAGCAACG+AGG | - | chr8.4:32976262-32976281 | None:intergenic | 55.0% | |
| TATGGTCACGACGCGGACAT+TGG | - | chr8.4:32976864-32976883 | None:intergenic | 55.0% | |
| TGGAATGCCATCCTTCCTGG+AGG | + | chr8.4:32978087-32978106 | MS.gene97980:CDS | 55.0% | |
| TTGCCAAGTTCCCAAGCCGA+CGG | - | chr8.4:32976222-32976241 | None:intergenic | 55.0% | |
| !! | AAGATCCCTTCCGTCGGCTT+GGG | + | chr8.4:32976209-32976228 | MS.gene97980:CDS | 55.0% |
| AGCCGTTGCTACCGCCATCA+AGG | + | chr8.4:32976271-32976290 | MS.gene97980:CDS | 60.0% | |
| ATGCCATCCTTCCTGGAGGC+AGG | + | chr8.4:32978091-32978110 | MS.gene97980:CDS | 60.0% | |
| CAAGCCGACGGAAGGGATCT+TGG | - | chr8.4:32976210-32976229 | None:intergenic | 60.0% | |
| CAAGTTCCCAAGCCGACGGA+AGG | - | chr8.4:32976218-32976237 | None:intergenic | 60.0% | |
| CTTGGGAACTTGGCAAGCCG+AGG | + | chr8.4:32976226-32976245 | MS.gene97980:CDS | 60.0% | |
| GACGGAAGGGATCTTGGCTC+CGG | - | chr8.4:32976204-32976223 | None:intergenic | 60.0% | |
| GCCGTGAATTCGGCGCCTAT+TGG | - | chr8.4:32977903-32977922 | None:intergenic | 60.0% | |
| GGAGCCAAGATCCCTTCCGT+CGG | + | chr8.4:32976203-32976222 | MS.gene97980:CDS | 60.0% | |
| TGGCAAGCCGAGGATGATCC+TGG | + | chr8.4:32976236-32976255 | MS.gene97980:CDS | 60.0% | |
| TGTCCTGCCTCCAGGAAGGA+TGG | - | chr8.4:32978097-32978116 | None:intergenic | 60.0% | |
| ! | CAAGATCCCTTCCGTCGGCT+TGG | + | chr8.4:32976208-32976227 | MS.gene97980:CDS | 60.0% |
| !! | AGGCGCCGAATTCACGGCTA+AGG | + | chr8.4:32977905-32977924 | MS.gene97980:CDS | 60.0% |
| !! | CTTCCGTCGGCTTGGGAACT+TGG | + | chr8.4:32976216-32976235 | MS.gene97980:CDS | 60.0% |
| ACGGCTTCAGCAACGAGGCC+AGG | - | chr8.4:32976257-32976276 | None:intergenic | 65.0% | |
| CACCTTTGGGCTCCCCAACC+TGG | + | chr8.4:32978297-32978316 | MS.gene97980:CDS | 65.0% | |
| GCGGAGTTTGTCCTGCCTCC+AGG | - | chr8.4:32978105-32978124 | None:intergenic | 65.0% | |
| ! | AGCCAGGTTGGGGAGCCCAA+AGG | - | chr8.4:32978302-32978321 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 32976167 | 32978986 | 32976167 | ID=MS.gene97980 |
| chr8.4 | mRNA | 32976167 | 32978986 | 32976167 | ID=MS.gene97980.t1;Parent=MS.gene97980 |
| chr8.4 | exon | 32976167 | 32976292 | 32976167 | ID=MS.gene97980.t1.exon1;Parent=MS.gene97980.t1 |
| chr8.4 | CDS | 32976167 | 32976292 | 32976167 | ID=cds.MS.gene97980.t1;Parent=MS.gene97980.t1 |
| chr8.4 | exon | 32976383 | 32976433 | 32976383 | ID=MS.gene97980.t1.exon2;Parent=MS.gene97980.t1 |
| chr8.4 | CDS | 32976383 | 32976433 | 32976383 | ID=cds.MS.gene97980.t1;Parent=MS.gene97980.t1 |
| chr8.4 | exon | 32976520 | 32976596 | 32976520 | ID=MS.gene97980.t1.exon3;Parent=MS.gene97980.t1 |
| chr8.4 | CDS | 32976520 | 32976596 | 32976520 | ID=cds.MS.gene97980.t1;Parent=MS.gene97980.t1 |
| chr8.4 | exon | 32976683 | 32976770 | 32976683 | ID=MS.gene97980.t1.exon4;Parent=MS.gene97980.t1 |
| chr8.4 | CDS | 32976683 | 32976770 | 32976683 | ID=cds.MS.gene97980.t1;Parent=MS.gene97980.t1 |
| chr8.4 | exon | 32977870 | 32978157 | 32977870 | ID=MS.gene97980.t1.exon5;Parent=MS.gene97980.t1 |
| chr8.4 | CDS | 32977870 | 32978157 | 32977870 | ID=cds.MS.gene97980.t1;Parent=MS.gene97980.t1 |
| chr8.4 | exon | 32978290 | 32978532 | 32978290 | ID=MS.gene97980.t1.exon6;Parent=MS.gene97980.t1 |
| chr8.4 | CDS | 32978290 | 32978532 | 32978290 | ID=cds.MS.gene97980.t1;Parent=MS.gene97980.t1 |
| chr8.4 | exon | 32978900 | 32978986 | 32978900 | ID=MS.gene97980.t1.exon7;Parent=MS.gene97980.t1 |
| chr8.4 | CDS | 32978900 | 32978986 | 32978900 | ID=cds.MS.gene97980.t1;Parent=MS.gene97980.t1 |
| Gene Sequence |
| Protein sequence |
