AlfalfaGEDB | MS.gene23886

M. sativa cultivar XinJiangDaYe / MS.gene23886

KEGG: K11253
GO: GO:0000786 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0032991 GO:0032993 GO:0044815 GO:0046982 GO:0046983 GO:0097159 GO:1901363
PFAM: PF00125.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23886.t1	XP_004512510.2	100	136	0	0	1	136	104	239	5.80E-64	253.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23886.t1	P68429	100.0	136	0	0	1	136	1	136	1.4e-66	253.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23886.t1	A0A1S3TJX1	100.0	136	0	0	1	136	1	136	4.2e-64	253.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049989	MS.gene23886	0.823299	1.49E-53	-1.69E-46
MS.gene050875	MS.gene23886	0.804355	2.25E-49	-1.69E-46
MS.gene05124	MS.gene23886	0.819561	1.09E-52	-1.69E-46
MS.gene051339	MS.gene23886	0.810697	1.01E-50	-1.69E-46
MS.gene051816	MS.gene23886	0.832321	1.01E-55	-1.69E-46
MS.gene051896	MS.gene23886	0.851878	6.66E-61	-1.69E-46
MS.gene051914	MS.gene23886	0.885181	1.01E-71	-1.69E-46
MS.gene051955	MS.gene23886	0.815908	7.26E-52	-1.69E-46
MS.gene052143	MS.gene23886	0.803075	4.14E-49	-1.69E-46
MS.gene052308	MS.gene23886	0.897217	1.74E-76	-1.69E-46
MS.gene052367	MS.gene23886	0.858115	1.03E-62	-1.69E-46
MS.gene053173	MS.gene23886	0.906228	1.86E-80	-1.69E-46
MS.gene053348	MS.gene23886	0.875853	2.22E-68	-1.69E-46
MS.gene053416	MS.gene23886	0.826843	2.17E-54	-1.69E-46
MS.gene053417	MS.gene23886	0.825945	3.55E-54	-1.69E-46
MS.gene054457	MS.gene23886	0.805655	1.20E-49	-1.69E-46
MS.gene054459	MS.gene23886	0.819111	1.38E-52	-1.69E-46
MS.gene054551	MS.gene23886	0.907838	3.28E-81	-1.69E-46
MS.gene054552	MS.gene23886	0.846426	2.19E-59	-1.69E-46
MS.gene054593	MS.gene23886	0.899101	2.77E-77	-1.69E-46
MS.gene054633	MS.gene23886	0.857257	1.85E-62	-1.69E-46
MS.gene054662	MS.gene23886	0.876007	1.97E-68	-1.69E-46
MS.gene054885	MS.gene23886	0.836601	8.51E-57	-1.69E-46
MS.gene055308	MS.gene23886	0.910405	1.94E-82	-1.69E-46
MS.gene055578	MS.gene23886	0.91205	3.03E-83	-1.69E-46
MS.gene055579	MS.gene23886	0.804633	1.97E-49	-1.69E-46
MS.gene055957	MS.gene23886	0.897321	1.57E-76	-1.69E-46
MS.gene056041	MS.gene23886	0.898706	4.08E-77	-1.69E-46
MS.gene05640	MS.gene23886	0.930536	1.42E-93	-1.69E-46
MS.gene056526	MS.gene23886	0.813555	2.41E-51	-1.69E-46
MS.gene056528	MS.gene23886	0.838285	3.15E-57	-1.69E-46
MS.gene05652	MS.gene23886	0.863059	3.26E-64	-1.69E-46
MS.gene057367	MS.gene23886	0.867349	1.46E-65	-1.69E-46
MS.gene057458	MS.gene23886	0.893988	3.76E-75	-1.69E-46
MS.gene057669	MS.gene23886	0.818025	2.43E-52	-1.69E-46
MS.gene058013	MS.gene23886	0.857016	2.18E-62	-1.69E-46
MS.gene058128	MS.gene23886	0.909656	4.47E-82	-1.69E-46
MS.gene058818	MS.gene23886	0.817138	3.85E-52	-1.69E-46
MS.gene058844	MS.gene23886	0.805999	1.02E-49	-1.69E-46
MS.gene058849	MS.gene23886	0.815124	1.09E-51	-1.69E-46
MS.gene058853	MS.gene23886	0.905891	2.66E-80	-1.69E-46
MS.gene059553	MS.gene23886	0.859825	3.16E-63	-1.69E-46
MS.gene059616	MS.gene23886	0.874664	5.66E-68	-1.69E-46
MS.gene060291	MS.gene23886	0.816739	4.73E-52	-1.69E-46
MS.gene060473	MS.gene23886	0.858289	9.13E-63	-1.69E-46
MS.gene060565	MS.gene23886	0.838789	2.33E-57	-1.69E-46
MS.gene06093	MS.gene23886	0.91146	5.93E-83	-1.69E-46
MS.gene061099	MS.gene23886	0.861405	1.05E-63	-1.69E-46
MS.gene061260	MS.gene23886	0.878044	3.86E-69	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene063067	MS.gene23886	PPI
MS.gene015760	MS.gene23886	PPI
MS.gene055512	MS.gene23886	PPI
MS.gene23886	MS.gene35163	PPI
MS.gene66752	MS.gene23886	PPI
MS.gene58114	MS.gene23886	PPI
MS.gene024064	MS.gene23886	PPI
MS.gene23886	MS.gene78224	PPI
MS.gene58285	MS.gene23886	PPI
MS.gene25357	MS.gene23886	PPI
MS.gene038612	MS.gene23886	PPI
MS.gene23886	MS.gene81646	PPI
MS.gene027907	MS.gene23886	PPI
MS.gene067742	MS.gene23886	PPI
MS.gene78322	MS.gene23886	PPI
MS.gene64164	MS.gene23886	PPI
MS.gene23886	MS.gene70990	PPI
MS.gene23886	MS.gene28438	PPI
MS.gene014301	MS.gene23886	PPI
MS.gene000604	MS.gene23886	PPI
MS.gene24196	MS.gene23886	PPI
MS.gene58116	MS.gene23886	PPI
MS.gene23886	MS.gene70261	PPI
MS.gene23886	MS.gene066960	PPI
MS.gene030661	MS.gene23886	PPI
MS.gene61192	MS.gene23886	PPI
MS.gene23886	MS.gene072431	PPI
MS.gene28432	MS.gene23886	PPI
MS.gene79799	MS.gene23886	PPI
MS.gene88233	MS.gene23886	PPI
MS.gene89203	MS.gene23886	PPI
MS.gene068179	MS.gene23886	PPI
MS.gene97703	MS.gene23886	PPI
MS.gene06236	MS.gene23886	PPI
MS.gene23886	MS.gene04748	PPI
MS.gene95244	MS.gene23886	PPI
MS.gene41679	MS.gene23886	PPI
MS.gene94307	MS.gene23886	PPI
MS.gene91631	MS.gene23886	PPI
MS.gene021887	MS.gene23886	PPI
MS.gene009155	MS.gene23886	PPI
MS.gene78924	MS.gene23886	PPI
MS.gene52605	MS.gene23886	PPI
MS.gene020313	MS.gene23886	PPI
MS.gene07616	MS.gene23886	PPI
MS.gene070538	MS.gene23886	PPI
MS.gene98552	MS.gene23886	PPI
MS.gene78323	MS.gene23886	PPI
MS.gene23886	MS.gene05905	PPI
MS.gene23886	MS.gene64164	PPI
MS.gene39538	MS.gene23886	PPI
MS.gene066535	MS.gene23886	PPI
MS.gene78922	MS.gene23886	PPI
MS.gene071851	MS.gene23886	PPI
MS.gene47573	MS.gene23886	PPI
MS.gene28434	MS.gene23886	PPI
MS.gene016712	MS.gene23886	PPI
MS.gene23886	MS.gene027909	PPI
MS.gene057458	MS.gene23886	PPI
MS.gene94315	MS.gene23886	PPI
MS.gene059054	MS.gene23886	PPI
MS.gene23886	MS.gene030664	PPI
MS.gene014181	MS.gene23886	PPI
MS.gene018762	MS.gene23886	PPI
MS.gene60199	MS.gene23886	PPI
MS.gene068178	MS.gene23886	PPI
MS.gene23886	MS.gene47284	PPI
MS.gene013163	MS.gene23886	PPI
MS.gene23886	MS.gene61193	PPI
MS.gene49838	MS.gene23886	PPI
MS.gene32514	MS.gene23886	PPI
MS.gene23886	MS.gene069975	PPI
MS.gene053230	MS.gene23886	PPI
MS.gene064876	MS.gene23886	PPI
MS.gene44458	MS.gene23886	PPI
MS.gene23886	MS.gene78324	PPI
MS.gene028296	MS.gene23886	PPI
MS.gene29299	MS.gene23886	PPI
MS.gene042871	MS.gene23886	PPI
MS.gene04820	MS.gene23886	PPI
MS.gene66836	MS.gene23886	PPI
MS.gene033505	MS.gene23886	PPI
MS.gene072433	MS.gene23886	PPI
MS.gene23886	MS.gene017431	PPI
MS.gene23886	MS.gene70258	PPI
MS.gene50129	MS.gene23886	PPI
MS.gene32513	MS.gene23886	PPI
MS.gene68716	MS.gene23886	PPI
MS.gene23886	MS.gene056335	PPI
MS.gene23886	MS.gene58112	PPI
MS.gene23886	MS.gene011710	PPI
MS.gene23886	MS.gene29300	PPI
MS.gene030666	MS.gene23886	PPI
MS.gene23886	MS.gene072432	PPI
MS.gene066537	MS.gene23886	PPI
MS.gene97701	MS.gene23886	PPI
MS.gene60200	MS.gene23886	PPI
MS.gene36496	MS.gene23886	PPI
MS.gene23886	MS.gene63118	PPI
MS.gene049111	MS.gene23886	PPI
MS.gene027904	MS.gene23886	PPI
MS.gene00233	MS.gene23886	PPI
MS.gene70263	MS.gene23886	PPI
MS.gene29521	MS.gene23886	PPI
MS.gene44457	MS.gene23886	PPI
MS.gene23886	MS.gene60196	PPI
MS.gene23886	MS.gene29298	PPI
MS.gene68113	MS.gene23886	PPI
MS.gene23886	MS.gene34797	PPI
MS.gene66051	MS.gene23886	PPI
MS.gene23886	MS.gene46303	PPI
MS.gene034255	MS.gene23886	PPI
MS.gene011711	MS.gene23886	PPI
MS.gene87898	MS.gene23886	PPI
MS.gene23886	MS.gene64996	PPI
MS.gene23886	MS.gene26084	PPI
MS.gene65125	MS.gene23886	PPI
MS.gene23886	MS.gene78227	PPI
MS.gene64998	MS.gene23886	PPI
MS.gene23886	MS.gene066536	PPI
MS.gene29445	MS.gene23886	PPI
MS.gene046235	MS.gene23886	PPI
MS.gene26406	MS.gene23886	PPI
MS.gene55626	MS.gene23886	PPI
MS.gene056335	MS.gene23886	PPI
MS.gene82109	MS.gene23886	PPI
MS.gene23886	MS.gene03849	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23886.t1	MTR_7g059070	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene23886.t1	MTR_5g029820	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene23886.t1	MTR_5g029770	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene23886.t1	MTR_4g065990	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene23886.t1	MTR_4g088150	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene23886.t1	MTR_2g035230	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene23886.t1	MTR_8g092720	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene23886.t1	MTR_8g063500	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene23886.t1	MTR_8g103245	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene23886.t1	MTR_8g092820	100.000	136	0	0	1	136	1	136	4.79e-96	272
MS.gene23886.t1	MTR_7g013610	100.000	136	0	0	1	136	100	235	1.10e-95	275
MS.gene23886.t1	MTR_4g097175	97.059	136	4	0	1	136	1	136	3.29e-93	265
MS.gene23886.t1	MTR_1g023630	97.059	136	4	0	1	136	1	136	3.29e-93	265
MS.gene23886.t1	MTR_8g061940	97.059	136	4	0	1	136	1	136	3.29e-93	265
MS.gene23886.t1	MTR_8g099430	96.324	136	5	0	1	136	1	136	1.38e-92	264
MS.gene23886.t1	MTR_4g097170	96.324	136	5	0	1	136	42	177	2.29e-91	262
MS.gene23886.t1	MTR_2g082310	89.706	136	14	0	1	136	1	136	1.38e-86	248
MS.gene23886.t1	MTR_2g082340	89.706	136	14	0	1	136	1	136	1.38e-86	248
MS.gene23886.t1	MTR_2g082370	85.616	146	11	1	1	136	1	146	1.74e-82	238
MS.gene23886.t1	MTR_2g082400	84.559	136	19	2	1	135	1	135	6.38e-75	219
MS.gene23886.t1	MTR_7g013600	86.607	112	15	0	25	136	2	113	1.01e-65	195
MS.gene23886.t1	MTR_7g023830	67.164	134	43	1	1	134	1	133	6.48e-56	171
MS.gene23886.t1	MTR_1g023630	73.504	117	15	3	1	111	1	107	3.81e-52	160
MS.gene23886.t1	MTR_5g024630	67.241	116	35	2	1	116	1	113	1.63e-45	144
MS.gene23886.t1	MTR_7g023880	58.647	133	41	3	3	134	18	137	5.46e-43	139
MS.gene23886.t1	MTR_5g024530	68.182	110	12	2	19	128	68	154	4.56e-42	137
MS.gene23886.t1	MTR_0197s0100	100.000	66	0	0	1	66	1	66	1.45e-40	132
MS.gene23886.t1	MTR_8g027840	55.102	98	43	1	37	133	28	125	4.83e-30	105
MS.gene23886.t1	MTR_8g105150	53.846	91	10	1	37	127	11	69	1.43e-25	92.4
MS.gene23886.t1	MTR_8g092740	97.368	38	1	0	99	136	118	155	4.60e-20	80.9
MS.gene23886.t1	MTR_5g089120	76.190	42	10	0	82	123	6	47	6.07e-18	73.6
MS.gene23886.t1	MTR_5g024600	62.963	54	20	0	1	54	1	54	1.76e-15	66.2
MS.gene23886.t1	MTR_4g128040	75.676	37	9	0	79	115	20	56	3.38e-15	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23886.t1	AT5G65360	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene23886.t1	AT5G10390	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene23886.t1	AT5G10400	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene23886.t1	AT3G27360	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene23886.t1	AT1G09200	99.265	136	1	0	1	136	1	136	1.55e-95	271
MS.gene23886.t1	AT5G10980	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene23886.t1	AT4G40040	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene23886.t1	AT4G40040	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene23886.t1	AT4G40040	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene23886.t1	AT4G40030	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene23886.t1	AT4G40030	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene23886.t1	AT4G40030	97.059	136	4	0	1	136	1	136	3.44e-93	265
MS.gene23886.t1	AT4G40030	97.059	136	4	0	1	136	29	164	6.76e-93	266
MS.gene23886.t1	AT5G65350	94.853	136	7	0	1	136	1	136	5.09e-91	260
MS.gene23886.t1	AT1G75600	93.382	136	9	0	1	136	1	136	1.20e-89	256
MS.gene23886.t1	AT1G13370	93.382	136	9	0	1	136	1	136	5.32e-89	254
MS.gene23886.t1	AT1G19890	89.781	137	13	1	1	136	1	137	1.03e-83	241
MS.gene23886.t1	AT5G12910	71.111	135	34	2	1	135	1	130	9.51e-67	198
MS.gene23886.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110
MS.gene23886.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110
MS.gene23886.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110
MS.gene23886.t1	AT1G01370	53.982	113	49	2	24	134	63	174	2.86e-31	110

Find 37 sgRNAs with CRISPR-Local

Find 36 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGGTTGCCGGAGCAGATTTC+CGG	0.243304	5.2:-18659682	None:intergenic
TTGGTGGCTAGCTGCTTTCT+TGG	0.277587	5.2:-18659653	None:intergenic
TCACGAAGTGCAACGGTTCC+TGG	0.291776	5.2:-18659734	None:intergenic
TTCTTGACTCCTCCGGTTGC+CGG	0.293014	5.2:-18659695	None:intergenic
TGAGAAGCTCAGTGCTCTTC+TGG	0.304985	5.2:-18659769	None:intergenic
GCTGCTGAAGCTTATCTTGT+TGG	0.357332	5.2:+18659890	MS.gene23886:CDS
AGCAGATTTCCGGGCAGCTT+TGG	0.390197	5.2:-18659672	None:intergenic
CGGAAATCTGCTCCGGCAAC+CGG	0.392471	5.2:+18659683	MS.gene23886:CDS
GGTTGCCGGAGCAGATTTCC+GGG	0.407337	5.2:-18659681	None:intergenic
CTTTCTTGGTGCCTTTCCTC+CGG	0.425692	5.2:-18659639	None:intergenic
TTATCTTGTTGGTTTGTTTG+AGG	0.428809	5.2:+18659901	MS.gene23886:CDS
CGATTTCACGAACAAGTCTC+TGG	0.432729	5.2:-18659808	None:intergenic
AAACAGCGCTGCTTTGAAAT+CGG	0.457546	5.2:-18659853	None:intergenic
AGATTTCCGGGCAGCTTTGG+TGG	0.468887	5.2:-18659669	None:intergenic
AGCTAGCCACCAAAGCTGCC+CGG	0.491500	5.2:+18659663	MS.gene23886:CDS
CGAGCAAGTTGAATATCCTT+AGG	0.499677	5.2:-18659968	None:intergenic
GTGTGGCTTCTTGACTCCTC+CGG	0.501667	5.2:-18659702	None:intergenic
AGCTGCCCGGAAATCTGCTC+CGG	0.505877	5.2:+18659676	MS.gene23886:CDS
AGTAACTCTCTTAGCATGAA+TGG	0.521941	5.2:-18659939	None:intergenic
AGAGCACTGAGCTTCTCATA+AGG	0.531497	5.2:+18659774	MS.gene23886:CDS
TCGCAAATCCACCGGAGGAA+AGG	0.532804	5.2:+18659628	MS.gene23886:CDS
TGTTTGCTTTGTACGAGCCA+TGG	0.537743	5.2:-18659603	None:intergenic
GAGAGTTACTATCATGCCTA+AGG	0.550012	5.2:+18659952	MS.gene23886:CDS
ACTTGTTCGTGAAATCGCTC+AGG	0.551065	5.2:+18659814	MS.gene23886:CDS
TCTTGGTGCCTTTCCTCCGG+TGG	0.556160	5.2:-18659636	None:intergenic
CAGTGCTCTTCTGGTACTTG+CGG	0.579006	5.2:-18659760	None:intergenic
CAAACAGCTCGCAAATCCAC+CGG	0.586123	5.2:+18659620	MS.gene23886:CDS
TCACGAACAAGTCTCTGGAA+TGG	0.590006	5.2:-18659803	None:intergenic
CAACTTGCTCGCAGAATCAG+AGG	0.592233	5.2:+18659980	MS.gene23886:CDS
AAATCTGCTCCGGCAACCGG+AGG	0.607496	5.2:+18659686	MS.gene23886:CDS
TCGCAGAATCAGAGGCGAGA+GGG	0.615698	5.2:+18659988	MS.gene23886:CDS
CTCGCAGAATCAGAGGCGAG+AGG	0.629911	5.2:+18659987	MS.gene23886:CDS
AAGCCACACAGATTCCGTCC+AGG	0.632383	5.2:+18659716	MS.gene23886:CDS
GCGGATCTCACGAAGTGCAA+CGG	0.633057	5.2:-18659741	None:intergenic
GAAGTGCAACGGTTCCTGGA+CGG	0.655834	5.2:-18659730	None:intergenic
GTTCCTGGACGGAATCTGTG+TGG	0.669194	5.2:-18659719	None:intergenic
ACAGCTCGCAAATCCACCGG+AGG	0.704783	5.2:+18659623	MS.gene23886:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTATCTTGTTGGTTTGTTTG+AGG	+	chr5.2:18659901-18659920	MS.gene23886:CDS	30.0%
	AGTAACTCTCTTAGCATGAA+TGG	-	chr5.2:18659942-18659961	None:intergenic	35.0%
	GAGAGTTACTATCATGCCTA+AGG	+	chr5.2:18659952-18659971	MS.gene23886:CDS	40.0%
!	CGAGCAAGTTGAATATCCTT+AGG	-	chr5.2:18659971-18659990	None:intergenic	40.0%
!!	AAACAGCGCTGCTTTGAAAT+CGG	-	chr5.2:18659856-18659875	None:intergenic	40.0%
	ACTTGTTCGTGAAATCGCTC+AGG	+	chr5.2:18659814-18659833	MS.gene23886:CDS	45.0%
	CGATTTCACGAACAAGTCTC+TGG	-	chr5.2:18659811-18659830	None:intergenic	45.0%
	GCTGCTGAAGCTTATCTTGT+TGG	+	chr5.2:18659890-18659909	MS.gene23886:CDS	45.0%
!	TCACGAACAAGTCTCTGGAA+TGG	-	chr5.2:18659806-18659825	None:intergenic	45.0%
!!	AGAGCACTGAGCTTCTCATA+AGG	+	chr5.2:18659774-18659793	MS.gene23886:CDS	45.0%
	CAAACAGCTCGCAAATCCAC+CGG	+	chr5.2:18659620-18659639	MS.gene23886:CDS	50.0%
	CAGTGCTCTTCTGGTACTTG+CGG	-	chr5.2:18659763-18659782	None:intergenic	50.0%
	TGAGAAGCTCAGTGCTCTTC+TGG	-	chr5.2:18659772-18659791	None:intergenic	50.0%
!	CAACTTGCTCGCAGAATCAG+AGG	+	chr5.2:18659980-18659999	MS.gene23886:CDS	50.0%
!	TTGGTGGCTAGCTGCTTTCT+TGG	-	chr5.2:18659656-18659675	None:intergenic	50.0%
!!	CTTTCTTGGTGCCTTTCCTC+CGG	-	chr5.2:18659642-18659661	None:intergenic	50.0%
	AAGCCACACAGATTCCGTCC+AGG	+	chr5.2:18659716-18659735	MS.gene23886:CDS	55.0%
	AGCAGATTTCCGGGCAGCTT+TGG	-	chr5.2:18659675-18659694	None:intergenic	55.0%
	GAAGTGCAACGGTTCCTGGA+CGG	-	chr5.2:18659733-18659752	None:intergenic	55.0%
	GCGGATCTCACGAAGTGCAA+CGG	-	chr5.2:18659744-18659763	None:intergenic	55.0%
	GTGTGGCTTCTTGACTCCTC+CGG	-	chr5.2:18659705-18659724	None:intergenic	55.0%
	GTTCCTGGACGGAATCTGTG+TGG	-	chr5.2:18659722-18659741	None:intergenic	55.0%
	TCACGAAGTGCAACGGTTCC+TGG	-	chr5.2:18659737-18659756	None:intergenic	55.0%
	TCGCAAATCCACCGGAGGAA+AGG	+	chr5.2:18659628-18659647	MS.gene23886:CDS	55.0%
	TCGCAGAATCAGAGGCGAGA+GGG	+	chr5.2:18659988-18660007	MS.gene23886:CDS	55.0%
	TTCTTGACTCCTCCGGTTGC+CGG	-	chr5.2:18659698-18659717	None:intergenic	55.0%
!	AGATTTCCGGGCAGCTTTGG+TGG	-	chr5.2:18659672-18659691	None:intergenic	55.0%
	AAATCTGCTCCGGCAACCGG+AGG	+	chr5.2:18659686-18659705	MS.gene23886:CDS	60.0%
	ACAGCTCGCAAATCCACCGG+AGG	+	chr5.2:18659623-18659642	MS.gene23886:CDS	60.0%
	AGCTAGCCACCAAAGCTGCC+CGG	+	chr5.2:18659663-18659682	MS.gene23886:CDS	60.0%
	AGCTGCCCGGAAATCTGCTC+CGG	+	chr5.2:18659676-18659695	MS.gene23886:CDS	60.0%
	CGGAAATCTGCTCCGGCAAC+CGG	+	chr5.2:18659683-18659702	MS.gene23886:CDS	60.0%
	CGGTTGCCGGAGCAGATTTC+CGG	-	chr5.2:18659685-18659704	None:intergenic	60.0%
	CTCGCAGAATCAGAGGCGAG+AGG	+	chr5.2:18659987-18660006	MS.gene23886:CDS	60.0%
	GGTTGCCGGAGCAGATTTCC+GGG	-	chr5.2:18659684-18659703	None:intergenic	60.0%
!!	TCTTGGTGCCTTTCCTCCGG+TGG	-	chr5.2:18659639-18659658	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5.2	gene	18659605	18660015	18659605	ID=MS.gene23886
chr5.2	mRNA	18659605	18660015	18659605	ID=MS.gene23886.t1;Parent=MS.gene23886
chr5.2	exon	18659605	18660015	18659605	ID=MS.gene23886.t1.exon1;Parent=MS.gene23886.t1
chr5.2	CDS	18659605	18660015	18659605	ID=cds.MS.gene23886.t1;Parent=MS.gene23886.t1

Gene Sequence

>MS.gene23886

ATGGCTCGTACAAAGCAAACAGCTCGCAAATCCACCGGAGGAAAGGCACCAAGAAAGCAGCTAGCCACCAAAGCTGCCCGGAAATCTGCTCCGGCAACCGGAGGAGTCAAGAAGCCACACAGATTCCGTCCAGGAACCGTTGCACTTCGTGAGATCCGCAAGTACCAGAAGAGCACTGAGCTTCTCATAAGGAAGCTTCCATTCCAGAGACTTGTTCGTGAAATCGCTCAGGATTTCAAAACAGATCTCCGATTTCAAAGCAGCGCTGTTTCTGCTCTTCAAGAAGCTGCTGAAGCTTATCTTGTTGGTTTGTTTGAGGATACTAATCTCTGTGCCATTCATGCTAAGAGAGTTACTATCATGCCTAAGGATATTCAACTTGCTCGCAGAATCAGAGGCGAGAGGGCTTAG

Protein sequence

>MS.gene23886.t1

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA