Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069554.t1 | XP_013447071.1 | 92.6 | 663 | 18 | 3 | 24 | 657 | 76 | 736 | 0.00E+00 | 1191.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069554.t1 | Q38861 | 83.7 | 664 | 76 | 4 | 24 | 657 | 77 | 738 | 0.0e+00 | 1083.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069554.t1 | A0A072TW37 | 92.6 | 663 | 18 | 3 | 24 | 657 | 76 | 736 | 0.0e+00 | 1191.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene069554 | 0.814196 | 1.74E-51 | -1.69E-46 |
| MS.gene049378 | MS.gene069554 | 0.834991 | 2.18E-56 | -1.69E-46 |
| MS.gene049435 | MS.gene069554 | 0.846203 | 2.52E-59 | -1.69E-46 |
| MS.gene049452 | MS.gene069554 | 0.811311 | 7.46E-51 | -1.69E-46 |
| MS.gene049647 | MS.gene069554 | 0.816554 | 5.21E-52 | -1.69E-46 |
| MS.gene049669 | MS.gene069554 | 0.802925 | 4.45E-49 | -1.69E-46 |
| MS.gene049801 | MS.gene069554 | 0.83874 | 2.40E-57 | -1.69E-46 |
| MS.gene050105 | MS.gene069554 | 0.80999 | 1.44E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene069554 | 0.823788 | 1.15E-53 | -1.69E-46 |
| MS.gene050227 | MS.gene069554 | 0.81592 | 7.22E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene069554 | 0.827858 | 1.24E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene069554 | 0.839496 | 1.53E-57 | -1.69E-46 |
| MS.gene050605 | MS.gene069554 | 0.823727 | 1.19E-53 | -1.69E-46 |
| MS.gene050680 | MS.gene069554 | 0.829457 | 5.09E-55 | -1.69E-46 |
| MS.gene050750 | MS.gene069554 | 0.822003 | 2.99E-53 | -1.69E-46 |
| MS.gene050759 | MS.gene069554 | 0.831904 | 1.28E-55 | -1.69E-46 |
| MS.gene050826 | MS.gene069554 | 0.813838 | 2.09E-51 | -1.69E-46 |
| MS.gene050953 | MS.gene069554 | 0.813685 | 2.26E-51 | -1.69E-46 |
| MS.gene050962 | MS.gene069554 | 0.818175 | 2.25E-52 | -1.69E-46 |
| MS.gene051122 | MS.gene069554 | 0.802285 | 6.03E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene069554 | 0.813401 | 2.61E-51 | -1.69E-46 |
| MS.gene051368 | MS.gene069554 | 0.836358 | 9.81E-57 | -1.69E-46 |
| MS.gene051800 | MS.gene069554 | 0.828999 | 6.58E-55 | -1.69E-46 |
| MS.gene05216 | MS.gene069554 | 0.810604 | 1.06E-50 | -1.69E-46 |
| MS.gene052190 | MS.gene069554 | 0.812061 | 5.12E-51 | -1.69E-46 |
| MS.gene052333 | MS.gene069554 | 0.864853 | 9.02E-65 | -1.69E-46 |
| MS.gene052389 | MS.gene069554 | 0.801313 | 9.55E-49 | -1.69E-46 |
| MS.gene052426 | MS.gene069554 | 0.815423 | 9.32E-52 | -1.69E-46 |
| MS.gene052586 | MS.gene069554 | 0.826338 | 2.87E-54 | -1.69E-46 |
| MS.gene052674 | MS.gene069554 | 0.850879 | 1.28E-60 | -1.69E-46 |
| MS.gene052675 | MS.gene069554 | 0.856293 | 3.55E-62 | -1.69E-46 |
| MS.gene052677 | MS.gene069554 | 0.860885 | 1.51E-63 | -1.69E-46 |
| MS.gene053166 | MS.gene069554 | 0.85564 | 5.51E-62 | -1.69E-46 |
| MS.gene053201 | MS.gene069554 | 0.8409 | 6.58E-58 | -1.69E-46 |
| MS.gene053494 | MS.gene069554 | 0.81376 | 2.17E-51 | -1.69E-46 |
| MS.gene053584 | MS.gene069554 | 0.842674 | 2.24E-58 | -1.69E-46 |
| MS.gene053621 | MS.gene069554 | 0.808474 | 3.04E-50 | -1.69E-46 |
| MS.gene054093 | MS.gene069554 | 0.814142 | 1.79E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene069554 | 0.824405 | 8.22E-54 | -1.69E-46 |
| MS.gene05415 | MS.gene069554 | 0.823892 | 1.08E-53 | -1.69E-46 |
| MS.gene05417 | MS.gene069554 | 0.827561 | 1.46E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene069554 | 0.847356 | 1.22E-59 | -1.69E-46 |
| MS.gene054291 | MS.gene069554 | -0.805273 | 1.45E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene069554 | 0.803823 | 2.90E-49 | -1.69E-46 |
| MS.gene054405 | MS.gene069554 | 0.803384 | 3.58E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene069554 | 0.840447 | 8.65E-58 | -1.69E-46 |
| MS.gene054468 | MS.gene069554 | 0.849711 | 2.71E-60 | -1.69E-46 |
| MS.gene054479 | MS.gene069554 | 0.852033 | 6.02E-61 | -1.69E-46 |
| MS.gene054559 | MS.gene069554 | 0.825335 | 4.96E-54 | -1.69E-46 |
| MS.gene054576 | MS.gene069554 | 0.814901 | 1.22E-51 | -1.69E-46 |
| MS.gene054610 | MS.gene069554 | 0.801817 | 7.53E-49 | -1.69E-46 |
| MS.gene054826 | MS.gene069554 | 0.802241 | 6.16E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene069554 | 0.813598 | 2.36E-51 | -1.69E-46 |
| MS.gene05510 | MS.gene069554 | 0.814351 | 1.61E-51 | -1.69E-46 |
| MS.gene055227 | MS.gene069554 | 0.830559 | 2.74E-55 | -1.69E-46 |
| MS.gene055228 | MS.gene069554 | 0.804569 | 2.03E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene069554 | 0.810169 | 1.32E-50 | -1.69E-46 |
| MS.gene055367 | MS.gene069554 | 0.827688 | 1.36E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene069554 | 0.896332 | 4.09E-76 | -1.69E-46 |
| MS.gene055875 | MS.gene069554 | 0.816073 | 6.67E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene069554 | 0.836993 | 6.76E-57 | -1.69E-46 |
| MS.gene05595 | MS.gene069554 | 0.861552 | 9.47E-64 | -1.69E-46 |
| MS.gene056142 | MS.gene069554 | 0.810206 | 1.29E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene069554 | 0.833317 | 5.72E-56 | -1.69E-46 |
| MS.gene056174 | MS.gene069554 | 0.812444 | 4.23E-51 | -1.69E-46 |
| MS.gene056480 | MS.gene069554 | 0.81117 | 8.01E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene069554 | 0.849278 | 3.58E-60 | -1.69E-46 |
| MS.gene056779 | MS.gene069554 | 0.806467 | 8.11E-50 | -1.69E-46 |
| MS.gene056873 | MS.gene069554 | 0.829924 | 3.92E-55 | -1.69E-46 |
| MS.gene057012 | MS.gene069554 | 0.812558 | 3.99E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene069554 | 0.801108 | 1.05E-48 | -1.69E-46 |
| MS.gene057156 | MS.gene069554 | -0.817 | 4.14E-52 | -1.69E-46 |
| MS.gene057194 | MS.gene069554 | 0.842831 | 2.03E-58 | -1.69E-46 |
| MS.gene057394 | MS.gene069554 | 0.808018 | 3.81E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene069554 | 0.864883 | 8.82E-65 | -1.69E-46 |
| MS.gene057750 | MS.gene069554 | 0.800346 | 1.50E-48 | -1.69E-46 |
| MS.gene057869 | MS.gene069554 | 0.846839 | 1.69E-59 | -1.69E-46 |
| MS.gene058010 | MS.gene069554 | 0.842947 | 1.89E-58 | -1.69E-46 |
| MS.gene058146 | MS.gene069554 | 0.825169 | 5.43E-54 | -1.69E-46 |
| MS.gene058289 | MS.gene069554 | 0.8234 | 1.41E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene069554 | 0.829119 | 6.15E-55 | -1.69E-46 |
| MS.gene059128 | MS.gene069554 | 0.826793 | 2.23E-54 | -1.69E-46 |
| MS.gene059439 | MS.gene069554 | 0.815357 | 9.63E-52 | -1.69E-46 |
| MS.gene059550 | MS.gene069554 | 0.850024 | 2.22E-60 | -1.69E-46 |
| MS.gene059609 | MS.gene069554 | 0.827538 | 1.48E-54 | -1.69E-46 |
| MS.gene05973 | MS.gene069554 | 0.828045 | 1.12E-54 | -1.69E-46 |
| MS.gene060011 | MS.gene069554 | 0.871254 | 7.86E-67 | -1.69E-46 |
| MS.gene060137 | MS.gene069554 | -0.803877 | 2.83E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene069554 | 0.849074 | 4.08E-60 | -1.69E-46 |
| MS.gene060310 | MS.gene069554 | 0.814722 | 1.33E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene069554 | 0.805088 | 1.58E-49 | -1.69E-46 |
| MS.gene060520 | MS.gene069554 | 0.805603 | 1.23E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene069554 | 0.846223 | 2.49E-59 | -1.69E-46 |
| MS.gene060683 | MS.gene069554 | 0.844667 | 6.56E-59 | -1.69E-46 |
| MS.gene060685 | MS.gene069554 | 0.842215 | 2.96E-58 | -1.69E-46 |
| MS.gene060802 | MS.gene069554 | 0.838523 | 2.73E-57 | -1.69E-46 |
| MS.gene060850 | MS.gene069554 | 0.84088 | 6.66E-58 | -1.69E-46 |
| MS.gene060851 | MS.gene069554 | 0.828166 | 1.05E-54 | -1.69E-46 |
| MS.gene060852 | MS.gene069554 | 0.826171 | 3.14E-54 | -1.69E-46 |
| MS.gene060998 | MS.gene069554 | 0.85635 | 3.41E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 134 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACATGCTCGGAATTTATT+TGG | 0.143949 | 4.2:+6013694 | None:intergenic |
| TGATCAAGGTTACAGCTTTA+AGG | 0.170987 | 4.2:-6012539 | MS.gene069554:intron |
| CTCCAACATGGGATAATTTA+AGG | 0.203128 | 4.2:+6015936 | None:intergenic |
| ACATATAATATGGTTGCTTT+TGG | 0.236023 | 4.2:-6014556 | MS.gene069554:CDS |
| AACACCAACTAGGGACTTTC+CGG | 0.270811 | 4.2:+6014753 | None:intergenic |
| CTAAGGCTCTTCTCTTGATA+TGG | 0.277696 | 4.2:+6015209 | None:intergenic |
| AGGCTTCACCTGTCTCTTCT+TGG | 0.278361 | 4.2:+6014023 | None:intergenic |
| ATGGGATAATTTAAGGCATT+TGG | 0.283714 | 4.2:+6015943 | None:intergenic |
| TTTAGTTCCATCTCGAGGTC+TGG | 0.295958 | 4.2:+6015251 | None:intergenic |
| CATACAGTTTGGGACCAATT+AGG | 0.307490 | 4.2:+6014160 | None:intergenic |
| CCAATTTGCCTCATACAGTT+TGG | 0.314774 | 4.2:+6014149 | None:intergenic |
| TGAATTATCACATTTGCTTC+AGG | 0.315902 | 4.2:+6013111 | None:intergenic |
| AATTGGTTGGATCTTGTAAA+AGG | 0.316540 | 4.2:-6014132 | MS.gene069554:CDS |
| AGCGTCTGGGTCGTATTCTT+AGG | 0.321135 | 4.2:-6013050 | MS.gene069554:CDS |
| ACAGATCTGAACTTCCTAAT+TGG | 0.321620 | 4.2:-6014174 | MS.gene069554:CDS |
| CATTGGTTTGCGGAGTTTCA+TGG | 0.328602 | 4.2:+6013588 | None:intergenic |
| TATTTGGATTCATCACATAA+AGG | 0.329096 | 4.2:+6013710 | None:intergenic |
| ATATGGCCGTGGTTGTGCTT+GGG | 0.332017 | 4.2:+6015226 | None:intergenic |
| CCAAACTGTATGAGGCAAAT+TGG | 0.337223 | 4.2:-6014149 | MS.gene069554:CDS |
| AACAGTATTTACGTCTTTGC+TGG | 0.343453 | 4.2:+6013422 | None:intergenic |
| ATTTGGATTCATCACATAAA+GGG | 0.355854 | 4.2:+6013711 | None:intergenic |
| AGAATGGGGATTGCTGCTTA+TGG | 0.362406 | 4.2:-6014482 | MS.gene069554:CDS |
| CTCCGCAAACCAATGATATA+TGG | 0.363195 | 4.2:-6013580 | MS.gene069554:CDS |
| AGCTTCCTAAAGAGATGATT+AGG | 0.364739 | 4.2:-6018069 | MS.gene069554:CDS |
| AAGAGCCTTAGTAAAATGTT+TGG | 0.369614 | 4.2:-6015197 | MS.gene069554:CDS |
| ATAAACCTAATCATCTCTTT+AGG | 0.372165 | 4.2:+6018064 | None:intergenic |
| TGTTGTGACAACATATAATA+TGG | 0.372226 | 4.2:-6014566 | MS.gene069554:CDS |
| TTGGTGTTTCAGCAGCTTCC+CGG | 0.376812 | 4.2:-6014738 | MS.gene069554:CDS |
| GCGTCAAGAAGCACAGCGTC+TGG | 0.379944 | 4.2:-6013064 | MS.gene069554:CDS |
| CCATCGCCGAGCCCGTTTGC+AGG | 0.382900 | 4.2:-6018288 | MS.gene069554:intron |
| CTTGTAGCACCATATATCAT+TGG | 0.385865 | 4.2:+6013571 | None:intergenic |
| CAATTTGCCTCATACAGTTT+GGG | 0.388906 | 4.2:+6014150 | None:intergenic |
| TAAATGGCAGGGAAAGCTTC+AGG | 0.390345 | 4.2:-6012795 | MS.gene069554:intron |
| TTAGTTCCATCTCGAGGTCT+GGG | 0.406412 | 4.2:+6015252 | None:intergenic |
| CTTAGTAAAATGTTTGGAAA+TGG | 0.416991 | 4.2:-6015191 | MS.gene069554:intron |
| ACTAAATCTCACTGCAAACT+TGG | 0.417365 | 4.2:-6014318 | MS.gene069554:CDS |
| AGAAATAAGAAACAGAGAAT+GGG | 0.424172 | 4.2:-6014497 | MS.gene069554:CDS |
| GATATGGCCGTGGTTGTGCT+TGG | 0.426514 | 4.2:+6015225 | None:intergenic |
| TATCACCACGTGCCCTTTCG+TGG | 0.435050 | 4.2:+6013656 | None:intergenic |
| TCATCATCTCGATGATCAAC+TGG | 0.437109 | 4.2:-6011141 | MS.gene069554:CDS |
| AAGAAATAAGAAACAGAGAA+TGG | 0.440448 | 4.2:-6014498 | MS.gene069554:CDS |
| TGCTGTCTCTGTGGATCAGT+GGG | 0.446657 | 4.2:-6014683 | MS.gene069554:CDS |
| TTTGTACCTGCAAACGGGCT+CGG | 0.455277 | 4.2:+6018282 | None:intergenic |
| AATCATCTCTTTAGGAAGCT+TGG | 0.456652 | 4.2:+6018072 | None:intergenic |
| CACTGCAAACTTGGGCTCAC+AGG | 0.460451 | 4.2:-6014309 | MS.gene069554:intron |
| AATTGGTCCCAAACTGTATG+AGG | 0.461446 | 4.2:-6014157 | MS.gene069554:CDS |
| TCTCTTCACATGCTGGTTCA+AGG | 0.464065 | 4.2:-6013086 | MS.gene069554:CDS |
| ATGTACAGTGTGCTGAAGTA+TGG | 0.466560 | 4.2:-6014095 | MS.gene069554:CDS |
| CAAATCTAGATTACCTGAGC+AGG | 0.474858 | 4.2:+6017147 | None:intergenic |
| ACCTATCAGGTATTGAATGC+TGG | 0.476448 | 4.2:-6011042 | MS.gene069554:intron |
| TTCTCATAAATTACCACGAA+AGG | 0.478217 | 4.2:-6013669 | MS.gene069554:CDS |
| ATAGTTCTACCTTGTGGTGC+CGG | 0.479656 | 4.2:-6014772 | MS.gene069554:CDS |
| GCTGTATGCTGCGGTTCGGT+TGG | 0.484203 | 4.2:-6018142 | MS.gene069554:CDS |
| AGGTATTGAAGACATTGCTC+AGG | 0.488409 | 4.2:-6017869 | MS.gene069554:CDS |
| CTCTTCTCTTGATATGGCCG+TGG | 0.488835 | 4.2:+6015215 | None:intergenic |
| AGTGCAATGTCAGGTGCAAA+AGG | 0.493706 | 4.2:-6010934 | MS.gene069554:CDS |
| ATTCGCTGTATGCTGCGGTT+CGG | 0.493733 | 4.2:-6018146 | MS.gene069554:CDS |
| GCGTCTGGGTCGTATTCTTA+GGG | 0.498202 | 4.2:-6013049 | MS.gene069554:CDS |
| ATTCAGATCTCTTCACATGC+TGG | 0.501954 | 4.2:-6013093 | MS.gene069554:CDS |
| GTTTAGGGTACTCATGGAGA+TGG | 0.502400 | 4.2:-6017285 | MS.gene069554:intron |
| CAATGATATATGGTGCTACA+AGG | 0.508056 | 4.2:-6013570 | MS.gene069554:intron |
| GGATGGTTTATGTGGAGTAC+AGG | 0.509532 | 4.2:-6010912 | None:intergenic |
| TGGTTGGATCTTGTAAAAGG+TGG | 0.512861 | 4.2:-6014129 | MS.gene069554:CDS |
| AACGGCATATTTGTTCATCT+CGG | 0.521437 | 4.2:+6014632 | None:intergenic |
| GGATCGATGAGTGCAATGTC+AGG | 0.522160 | 4.2:-6010943 | MS.gene069554:CDS |
| TCTCATAAATTACCACGAAA+GGG | 0.522463 | 4.2:-6013668 | MS.gene069554:CDS |
| ACTGTATGAGGCAAATTGGT+TGG | 0.524427 | 4.2:-6014145 | MS.gene069554:CDS |
| ATAAATCTGTACCTGGGTAT+CGG | 0.525157 | 4.2:+6012715 | None:intergenic |
| CTTTGCTGTCAGATGTGAAA+CGG | 0.530400 | 4.2:+6014614 | None:intergenic |
| TGCCTTAAATTATCCCATGT+TGG | 0.531333 | 4.2:-6015938 | MS.gene069554:CDS |
| GAGAGATTCCGTGGTAACGC+TGG | 0.532353 | 4.2:-6014592 | MS.gene069554:CDS |
| TGCAGCTACACTTGTGAGAG+AGG | 0.532637 | 4.2:-6014208 | MS.gene069554:intron |
| AAAAGTGCTCGTCGTTCTCA+AGG | 0.533168 | 4.2:-6010964 | MS.gene069554:CDS |
| AAGCTGCTGAAACACCAACT+AGG | 0.535810 | 4.2:+6014743 | None:intergenic |
| GTCGTCATCGTAAGCATCAT+CGG | 0.541861 | 4.2:+6018532 | None:intergenic |
| AAGCTTCAGGATAGGATGGC+TGG | 0.541968 | 4.2:-6012782 | MS.gene069554:CDS |
| CCTGCAAACGGGCTCGGCGA+TGG | 0.542090 | 4.2:+6018288 | None:intergenic |
| GAAATAAGAAACAGAGAATG+GGG | 0.543248 | 4.2:-6014496 | MS.gene069554:CDS |
| TGCAAAAGGGATGGTTTATG+TGG | 0.544520 | 4.2:-6010920 | MS.gene069554:CDS |
| AGAGAACTCCAAGAAGAGAC+AGG | 0.548803 | 4.2:-6014031 | MS.gene069554:intron |
| AGCTTGCCTCCATCTGATGA+AGG | 0.551771 | 4.2:-6011179 | MS.gene069554:CDS |
| CCTGGGTATCGGTCGACACA+AGG | 0.553236 | 4.2:+6012726 | None:intergenic |
| ATGCTGTCTCTGTGGATCAG+TGG | 0.555068 | 4.2:-6014684 | MS.gene069554:CDS |
| CACCATATATCATTGGTTTG+CGG | 0.555102 | 4.2:+6013578 | None:intergenic |
| ATTCGAAATTGATCCTGCTC+AGG | 0.555292 | 4.2:-6017160 | MS.gene069554:intron |
| CGTCAAGAAGCACAGCGTCT+GGG | 0.556542 | 4.2:-6013063 | MS.gene069554:CDS |
| CCTTGTGTCGACCGATACCC+AGG | 0.557821 | 4.2:-6012726 | MS.gene069554:intron |
| GCGGAGTTTCATGGCATACT+CGG | 0.559802 | 4.2:+6013597 | None:intergenic |
| CTAAATCTCACTGCAAACTT+GGG | 0.561239 | 4.2:-6014317 | MS.gene069554:CDS |
| ACAAGGTAGAACTATGATAC+CGG | 0.568352 | 4.2:+6014780 | None:intergenic |
| AAGTCATACTCCTCCAACAT+GGG | 0.569092 | 4.2:+6015925 | None:intergenic |
| TATGGCCGTGGTTGTGCTTG+GGG | 0.571603 | 4.2:+6015227 | None:intergenic |
| TTATGAGAAACTCACATGCT+CGG | 0.574806 | 4.2:+6013683 | None:intergenic |
| AGCTGCTGAAACACCAACTA+GGG | 0.575072 | 4.2:+6014744 | None:intergenic |
| CCTTCAGGTAGAGCAAGATC+CGG | 0.580416 | 4.2:-6014799 | MS.gene069554:intron |
| TCATAAGCTTGTTTGTACAA+AGG | 0.583537 | 4.2:+6018322 | None:intergenic |
| GGGATTGCTGCTTATGGACG+AGG | 0.585259 | 4.2:-6014476 | MS.gene069554:intron |
| GGGTCGTATTCTTAGGGCAA+AGG | 0.588925 | 4.2:-6013043 | MS.gene069554:intron |
| AGATGTATTACTCAACTAAG+AGG | 0.589026 | 4.2:-6012576 | MS.gene069554:CDS |
| GGGAAAGCTTCAGGATAGGA+TGG | 0.590165 | 4.2:-6012786 | MS.gene069554:CDS |
| AATGCTGGTGATGATGCAGT+TGG | 0.591042 | 4.2:-6011027 | MS.gene069554:CDS |
| TTATTTGCAGCCATGTTGAG+AGG | 0.593332 | 4.2:-6013470 | MS.gene069554:intron |
| GATGATCAACTGGCACTACT+CGG | 0.594721 | 4.2:-6011131 | MS.gene069554:CDS |
| CTTAAATTATCCCATGTTGG+AGG | 0.600247 | 4.2:-6015935 | MS.gene069554:CDS |
| ACCGCATTCGCTGTATGCTG+CGG | 0.600268 | 4.2:-6018151 | MS.gene069554:CDS |
| ATAAGTATCATCATCATCAT+CGG | 0.601539 | 4.2:+6018559 | None:intergenic |
| AAAGCACTAGGTGAGATTGA+AGG | 0.606763 | 4.2:-6017249 | MS.gene069554:CDS |
| TTTACAATCAGCAAAGCACT+AGG | 0.610051 | 4.2:-6017261 | MS.gene069554:CDS |
| GGTGCCGGAAAGTCCCTAGT+TGG | 0.612274 | 4.2:-6014757 | MS.gene069554:CDS |
| TAAAGCCCCAAGCACAACCA+CGG | 0.615153 | 4.2:-6015232 | MS.gene069554:CDS |
| GGCAACAAATGCTGTCTCTG+TGG | 0.616726 | 4.2:-6014692 | MS.gene069554:CDS |
| GGGGCTTTAGTTCCATCTCG+AGG | 0.618388 | 4.2:+6015246 | None:intergenic |
| AAGCGAGATCCTTCATCAGA+TGG | 0.620834 | 4.2:+6011170 | None:intergenic |
| AATGTCAGGTGCAAAAGGGA+TGG | 0.623263 | 4.2:-6010929 | MS.gene069554:CDS |
| ATGATGCTATATCGCGAGCA+AGG | 0.624247 | 4.2:-6017845 | MS.gene069554:CDS |
| ACCGCAGCATACAGCGAATG+CGG | 0.627444 | 4.2:+6018150 | None:intergenic |
| TCAACTGGCACTACTCGGAA+AGG | 0.628539 | 4.2:-6011126 | MS.gene069554:intron |
| CAACAACTCCAGCGTTACCA+CGG | 0.635366 | 4.2:+6014584 | None:intergenic |
| TAGGATGGCTGGTGGCAAAG+AGG | 0.635488 | 4.2:-6012771 | MS.gene069554:CDS |
| GAAGTCATACTCCTCCAACA+TGG | 0.636793 | 4.2:+6015924 | None:intergenic |
| GGCAGGGAAAGCTTCAGGAT+AGG | 0.638026 | 4.2:-6012790 | MS.gene069554:intron |
| GGTGAACCCAGACCTCGAGA+TGG | 0.640415 | 4.2:-6015258 | MS.gene069554:CDS |
| GCGAGCAAGGATCACTTCTG+AGG | 0.642760 | 4.2:-6017832 | MS.gene069554:intron |
| GGTATCATAGTTCTACCTTG+TGG | 0.642998 | 4.2:-6014778 | MS.gene069554:CDS |
| GGTATTGAAGACATTGCTCA+GGG | 0.645900 | 4.2:-6017868 | MS.gene069554:CDS |
| CGAGATCCTTCATCAGATGG+AGG | 0.648662 | 4.2:+6011173 | None:intergenic |
| GCATGATAAACAGGTGCACG+TGG | 0.651390 | 4.2:-6014376 | MS.gene069554:intron |
| GTGCAATGTCAGGTGCAAAA+GGG | 0.652794 | 4.2:-6010933 | MS.gene069554:CDS |
| GACAGCAAAGAGAGATTCCG+TGG | 0.654068 | 4.2:-6014601 | MS.gene069554:CDS |
| AGGGACTTTCCGGCACCACA+AGG | 0.657347 | 4.2:+6014763 | None:intergenic |
| CTGGGTATCGGTCGACACAA+GGG | 0.670656 | 4.2:+6012727 | None:intergenic |
| GCTAAATCAAGCAGAAGTAG+CGG | 0.672882 | 4.2:-6017211 | MS.gene069554:CDS |
| AATTACCACGAAAGGGCACG+TGG | 0.685034 | 4.2:-6013661 | MS.gene069554:CDS |
| CTTCAGGATAGGATGGCTGG+TGG | 0.687755 | 4.2:-6012779 | MS.gene069554:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 6010913 | 6018714 | 6010913 | ID=MS.gene069554 |
| chr4.2 | mRNA | 6010913 | 6018714 | 6010913 | ID=MS.gene069554.t1;Parent=MS.gene069554 |
| chr4.2 | exon | 6018694 | 6018714 | 6018694 | ID=MS.gene069554.t1.exon1;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6018694 | 6018714 | 6018694 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6018547 | 6018598 | 6018547 | ID=MS.gene069554.t1.exon2;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6018547 | 6018598 | 6018547 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6018289 | 6018353 | 6018289 | ID=MS.gene069554.t1.exon3;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6018289 | 6018353 | 6018289 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6018057 | 6018198 | 6018057 | ID=MS.gene069554.t1.exon4;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6018057 | 6018198 | 6018057 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6017833 | 6017889 | 6017833 | ID=MS.gene069554.t1.exon5;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6017833 | 6017889 | 6017833 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6017161 | 6017301 | 6017161 | ID=MS.gene069554.t1.exon6;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6017161 | 6017301 | 6017161 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6015912 | 6015992 | 6015912 | ID=MS.gene069554.t1.exon7;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6015912 | 6015992 | 6015912 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6015192 | 6015279 | 6015192 | ID=MS.gene069554.t1.exon8;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6015192 | 6015279 | 6015192 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6014477 | 6014814 | 6014477 | ID=MS.gene069554.t1.exon9;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6014477 | 6014814 | 6014477 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6014310 | 6014385 | 6014310 | ID=MS.gene069554.t1.exon10;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6014310 | 6014385 | 6014310 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6014032 | 6014225 | 6014032 | ID=MS.gene069554.t1.exon11;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6014032 | 6014225 | 6014032 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6013571 | 6013734 | 6013571 | ID=MS.gene069554.t1.exon12;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6013571 | 6013734 | 6013571 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6013410 | 6013482 | 6013410 | ID=MS.gene069554.t1.exon13;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6013410 | 6013482 | 6013410 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6013044 | 6013157 | 6013044 | ID=MS.gene069554.t1.exon14;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6013044 | 6013157 | 6013044 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6012727 | 6012807 | 6012727 | ID=MS.gene069554.t1.exon15;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6012727 | 6012807 | 6012727 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6012540 | 6012599 | 6012540 | ID=MS.gene069554.t1.exon16;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6012540 | 6012599 | 6012540 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6011127 | 6011210 | 6011127 | ID=MS.gene069554.t1.exon17;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6011127 | 6011210 | 6011127 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| chr4.2 | exon | 6010913 | 6011055 | 6010913 | ID=MS.gene069554.t1.exon18;Parent=MS.gene069554.t1 |
| chr4.2 | CDS | 6010913 | 6011055 | 6010913 | ID=cds.MS.gene069554.t1;Parent=MS.gene069554.t1 |
| Gene Sequence |
| Protein sequence |
