Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55718.t1 | XP_013447071.1 | 99.6 | 498 | 2 | 0 | 1 | 498 | 239 | 736 | 1.90E-285 | 991.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55718.t1 | Q38861 | 93.0 | 498 | 35 | 0 | 1 | 498 | 241 | 738 | 3.9e-271 | 934.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55718.t1 | A0A072TW37 | 99.6 | 498 | 2 | 0 | 1 | 498 | 239 | 736 | 1.4e-285 | 991.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene55718 | 0.809134 | 2.20E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene55718 | 0.820739 | 5.85E-53 | -1.69E-46 |
| MS.gene049435 | MS.gene55718 | 0.8485 | 5.89E-60 | -1.69E-46 |
| MS.gene049452 | MS.gene55718 | 0.819626 | 1.05E-52 | -1.69E-46 |
| MS.gene049647 | MS.gene55718 | 0.809025 | 2.32E-50 | -1.69E-46 |
| MS.gene049669 | MS.gene55718 | 0.80647 | 8.10E-50 | -1.69E-46 |
| MS.gene049801 | MS.gene55718 | 0.833413 | 5.41E-56 | -1.69E-46 |
| MS.gene050105 | MS.gene55718 | 0.803667 | 3.12E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene55718 | 0.805485 | 1.30E-49 | -1.69E-46 |
| MS.gene050228 | MS.gene55718 | 0.809997 | 1.43E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene55718 | 0.836331 | 9.96E-57 | -1.69E-46 |
| MS.gene050605 | MS.gene55718 | 0.819807 | 9.57E-53 | -1.69E-46 |
| MS.gene050680 | MS.gene55718 | 0.828379 | 9.29E-55 | -1.69E-46 |
| MS.gene050750 | MS.gene55718 | 0.821704 | 3.51E-53 | -1.69E-46 |
| MS.gene050759 | MS.gene55718 | 0.833453 | 5.29E-56 | -1.69E-46 |
| MS.gene050760 | MS.gene55718 | 0.801094 | 1.06E-48 | -1.69E-46 |
| MS.gene050826 | MS.gene55718 | 0.812014 | 5.25E-51 | -1.69E-46 |
| MS.gene050953 | MS.gene55718 | 0.81267 | 3.77E-51 | -1.69E-46 |
| MS.gene050962 | MS.gene55718 | 0.819631 | 1.05E-52 | -1.69E-46 |
| MS.gene050963 | MS.gene55718 | 0.805035 | 1.62E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene55718 | 0.811705 | 6.13E-51 | -1.69E-46 |
| MS.gene051368 | MS.gene55718 | 0.840196 | 1.01E-57 | -1.69E-46 |
| MS.gene051800 | MS.gene55718 | 0.827531 | 1.49E-54 | -1.69E-46 |
| MS.gene05216 | MS.gene55718 | 0.80871 | 2.71E-50 | -1.69E-46 |
| MS.gene052190 | MS.gene55718 | 0.817253 | 3.63E-52 | -1.69E-46 |
| MS.gene052333 | MS.gene55718 | 0.865061 | 7.76E-65 | -1.69E-46 |
| MS.gene052426 | MS.gene55718 | 0.810142 | 1.34E-50 | -1.69E-46 |
| MS.gene052586 | MS.gene55718 | 0.82372 | 1.19E-53 | -1.69E-46 |
| MS.gene052674 | MS.gene55718 | 0.850928 | 1.24E-60 | -1.69E-46 |
| MS.gene052675 | MS.gene55718 | 0.856501 | 3.08E-62 | -1.69E-46 |
| MS.gene052677 | MS.gene55718 | 0.861044 | 1.35E-63 | -1.69E-46 |
| MS.gene053166 | MS.gene55718 | 0.858742 | 6.69E-63 | -1.69E-46 |
| MS.gene053201 | MS.gene55718 | 0.838366 | 3.00E-57 | -1.69E-46 |
| MS.gene053494 | MS.gene55718 | 0.804855 | 1.77E-49 | -1.69E-46 |
| MS.gene053584 | MS.gene55718 | 0.837767 | 4.28E-57 | -1.69E-46 |
| MS.gene053621 | MS.gene55718 | 0.815946 | 7.12E-52 | -1.69E-46 |
| MS.gene054093 | MS.gene55718 | 0.811484 | 6.84E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene55718 | 0.822294 | 2.56E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene55718 | 0.823481 | 1.35E-53 | -1.69E-46 |
| MS.gene05417 | MS.gene55718 | 0.819053 | 1.42E-52 | -1.69E-46 |
| MS.gene054236 | MS.gene55718 | 0.845138 | 4.90E-59 | -1.69E-46 |
| MS.gene054291 | MS.gene55718 | -0.806118 | 9.61E-50 | -1.69E-46 |
| MS.gene054405 | MS.gene55718 | 0.802889 | 4.53E-49 | -1.69E-46 |
| MS.gene054467 | MS.gene55718 | 0.83534 | 1.78E-56 | -1.69E-46 |
| MS.gene054468 | MS.gene55718 | 0.844477 | 7.38E-59 | -1.69E-46 |
| MS.gene054479 | MS.gene55718 | 0.846458 | 2.14E-59 | -1.69E-46 |
| MS.gene054559 | MS.gene55718 | 0.827758 | 1.31E-54 | -1.69E-46 |
| MS.gene054576 | MS.gene55718 | 0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene05510 | MS.gene55718 | 0.807679 | 4.49E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene55718 | 0.828858 | 7.12E-55 | -1.69E-46 |
| MS.gene055228 | MS.gene55718 | 0.804629 | 1.97E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene55718 | 0.805437 | 1.34E-49 | -1.69E-46 |
| MS.gene055367 | MS.gene55718 | 0.822849 | 1.90E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene55718 | 0.891085 | 5.48E-74 | -1.69E-46 |
| MS.gene055875 | MS.gene55718 | 0.812876 | 3.40E-51 | -1.69E-46 |
| MS.gene055926 | MS.gene55718 | 0.837297 | 5.65E-57 | -1.69E-46 |
| MS.gene05595 | MS.gene55718 | 0.848568 | 5.64E-60 | -1.69E-46 |
| MS.gene056142 | MS.gene55718 | 0.802304 | 5.98E-49 | -1.69E-46 |
| MS.gene056162 | MS.gene55718 | 0.80076 | 1.24E-48 | -1.69E-46 |
| MS.gene056173 | MS.gene55718 | 0.828446 | 8.95E-55 | -1.69E-46 |
| MS.gene056174 | MS.gene55718 | 0.819031 | 1.44E-52 | -1.69E-46 |
| MS.gene056480 | MS.gene55718 | 0.808772 | 2.63E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene55718 | 0.847423 | 1.17E-59 | -1.69E-46 |
| MS.gene056779 | MS.gene55718 | 0.809763 | 1.61E-50 | -1.69E-46 |
| MS.gene056873 | MS.gene55718 | 0.829336 | 5.45E-55 | -1.69E-46 |
| MS.gene057012 | MS.gene55718 | 0.811333 | 7.38E-51 | -1.69E-46 |
| MS.gene057156 | MS.gene55718 | -0.817347 | 3.46E-52 | -1.69E-46 |
| MS.gene057194 | MS.gene55718 | 0.838227 | 3.26E-57 | -1.69E-46 |
| MS.gene05761 | MS.gene55718 | 0.853516 | 2.27E-61 | -1.69E-46 |
| MS.gene057869 | MS.gene55718 | 0.843394 | 1.44E-58 | -1.69E-46 |
| MS.gene058010 | MS.gene55718 | 0.844506 | 7.25E-59 | -1.69E-46 |
| MS.gene058146 | MS.gene55718 | 0.815449 | 9.19E-52 | -1.69E-46 |
| MS.gene058289 | MS.gene55718 | 0.814602 | 1.42E-51 | -1.69E-46 |
| MS.gene058979 | MS.gene55718 | 0.830282 | 3.21E-55 | -1.69E-46 |
| MS.gene059128 | MS.gene55718 | 0.815678 | 8.17E-52 | -1.69E-46 |
| MS.gene059439 | MS.gene55718 | 0.809992 | 1.44E-50 | -1.69E-46 |
| MS.gene059550 | MS.gene55718 | 0.851329 | 9.53E-61 | -1.69E-46 |
| MS.gene059584 | MS.gene55718 | 0.800872 | 1.18E-48 | -1.69E-46 |
| MS.gene059609 | MS.gene55718 | 0.823195 | 1.58E-53 | -1.69E-46 |
| MS.gene05973 | MS.gene55718 | 0.815316 | 9.84E-52 | -1.69E-46 |
| MS.gene060011 | MS.gene55718 | 0.868387 | 6.78E-66 | -1.69E-46 |
| MS.gene060137 | MS.gene55718 | -0.802069 | 6.68E-49 | -1.69E-46 |
| MS.gene060167 | MS.gene55718 | 0.842772 | 2.11E-58 | -1.69E-46 |
| MS.gene060310 | MS.gene55718 | 0.814177 | 1.76E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene55718 | 0.807777 | 4.28E-50 | -1.69E-46 |
| MS.gene060520 | MS.gene55718 | 0.800115 | 1.68E-48 | -1.69E-46 |
| MS.gene06052 | MS.gene55718 | 0.846879 | 1.65E-59 | -1.69E-46 |
| MS.gene060683 | MS.gene55718 | 0.834019 | 3.82E-56 | -1.69E-46 |
| MS.gene060685 | MS.gene55718 | 0.83275 | 7.91E-56 | -1.69E-46 |
| MS.gene060802 | MS.gene55718 | 0.833031 | 6.73E-56 | -1.69E-46 |
| MS.gene060850 | MS.gene55718 | 0.840935 | 6.44E-58 | -1.69E-46 |
| MS.gene060851 | MS.gene55718 | 0.825912 | 3.62E-54 | -1.69E-46 |
| MS.gene060852 | MS.gene55718 | 0.823929 | 1.06E-53 | -1.69E-46 |
| MS.gene060998 | MS.gene55718 | 0.847955 | 8.33E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55718.t1 | MTR_8g098675 | 99.598 | 498 | 2 | 0 | 1 | 498 | 239 | 736 | 0.0 | 1040 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55718.t1 | AT5G41360 | 91.968 | 498 | 39 | 1 | 1 | 498 | 241 | 737 | 0.0 | 963 |
| MS.gene55718.t1 | AT5G41360 | 91.968 | 498 | 39 | 1 | 1 | 498 | 241 | 737 | 0.0 | 962 |
| MS.gene55718.t1 | AT5G41370 | 92.972 | 498 | 35 | 0 | 1 | 498 | 241 | 738 | 0.0 | 955 |
Find 112 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACATGCTCGGAATTTATT+TGG | 0.143949 | 4.2:+6001986 | None:intergenic |
| TGATCAAGGTTACAGCTTTA+AGG | 0.170987 | 4.2:-6000831 | MS.gene55718:intron |
| CTCCAACATGGGATAATTTA+AGG | 0.203128 | 4.2:+6004228 | None:intergenic |
| ACATATAATATGGTTGCTTT+TGG | 0.236023 | 4.2:-6002848 | MS.gene55718:CDS |
| AACACCAACTAGGGACTTTC+CGG | 0.270811 | 4.2:+6003045 | None:intergenic |
| CTAAGGCTCTTCTCTTGATA+TGG | 0.277696 | 4.2:+6003501 | None:intergenic |
| AGGCTTCACCTGTCTCTTCT+TGG | 0.278361 | 4.2:+6002315 | None:intergenic |
| ATGGGATAATTTAAGGCATT+TGG | 0.283714 | 4.2:+6004235 | None:intergenic |
| TTTAGTTCCATCTCGAGGTC+TGG | 0.295958 | 4.2:+6003543 | None:intergenic |
| CATACAGTTTGGGACCAATT+AGG | 0.307490 | 4.2:+6002452 | None:intergenic |
| CCAATTTGCCTCATACAGTT+TGG | 0.314774 | 4.2:+6002441 | None:intergenic |
| TGAATTATCACATTTGCTTC+AGG | 0.315902 | 4.2:+6001403 | None:intergenic |
| AATTGGTTGGATCTTGTAAA+AGG | 0.316540 | 4.2:-6002424 | MS.gene55718:CDS |
| AGCGTCTGGGTCGTATTCTT+AGG | 0.321135 | 4.2:-6001342 | MS.gene55718:CDS |
| ACAGATCTGAACTTCCTAAT+TGG | 0.321620 | 4.2:-6002466 | MS.gene55718:CDS |
| CATTGGTTTGCGGAGTTTCA+TGG | 0.328602 | 4.2:+6001880 | None:intergenic |
| TATTTGGATTCATCACATAA+AGG | 0.329096 | 4.2:+6002002 | None:intergenic |
| ATATGGCCGTGGTTGTGCTT+GGG | 0.332017 | 4.2:+6003518 | None:intergenic |
| CCAAACTGTATGAGGCAAAT+TGG | 0.337223 | 4.2:-6002441 | MS.gene55718:CDS |
| AACAGTATTTACGTCTTTGC+TGG | 0.343453 | 4.2:+6001714 | None:intergenic |
| ATTTGGATTCATCACATAAA+GGG | 0.355854 | 4.2:+6002003 | None:intergenic |
| AGAATGGGGATTGCTGCTTA+TGG | 0.362406 | 4.2:-6002774 | MS.gene55718:CDS |
| CTCCGCAAACCAATGATATA+TGG | 0.363195 | 4.2:-6001872 | MS.gene55718:CDS |
| AAGAGCCTTAGTAAAATGTT+TGG | 0.369614 | 4.2:-6003489 | MS.gene55718:CDS |
| TGTTGTGACAACATATAATA+TGG | 0.372226 | 4.2:-6002858 | MS.gene55718:CDS |
| TTGGTGTTTCAGCAGCTTCC+CGG | 0.376812 | 4.2:-6003030 | MS.gene55718:CDS |
| GCGTCAAGAAGCACAGCGTC+TGG | 0.379944 | 4.2:-6001356 | MS.gene55718:CDS |
| CTTGTAGCACCATATATCAT+TGG | 0.385865 | 4.2:+6001863 | None:intergenic |
| CAATTTGCCTCATACAGTTT+GGG | 0.388906 | 4.2:+6002442 | None:intergenic |
| TAAATGGCAGGGAAAGCTTC+AGG | 0.390345 | 4.2:-6001087 | MS.gene55718:intron |
| TTAGTTCCATCTCGAGGTCT+GGG | 0.406412 | 4.2:+6003544 | None:intergenic |
| CTTAGTAAAATGTTTGGAAA+TGG | 0.416991 | 4.2:-6003483 | MS.gene55718:intron |
| ACTAAATCTCACTGCAAACT+TGG | 0.417365 | 4.2:-6002610 | MS.gene55718:CDS |
| AGAAATAAGAAACAGAGAAT+GGG | 0.424172 | 4.2:-6002789 | MS.gene55718:CDS |
| GATATGGCCGTGGTTGTGCT+TGG | 0.426514 | 4.2:+6003517 | None:intergenic |
| TATCACCACGTGCCCTTTCG+TGG | 0.435050 | 4.2:+6001948 | None:intergenic |
| TCATCATCTCGATGATCAAC+TGG | 0.437109 | 4.2:-5999433 | MS.gene55718:CDS |
| AAGAAATAAGAAACAGAGAA+TGG | 0.440448 | 4.2:-6002790 | MS.gene55718:CDS |
| TGCTGTCTCTGTGGATCAGT+GGG | 0.446657 | 4.2:-6002975 | MS.gene55718:CDS |
| CACTGCAAACTTGGGCTCAC+AGG | 0.460451 | 4.2:-6002601 | MS.gene55718:intron |
| AATTGGTCCCAAACTGTATG+AGG | 0.461446 | 4.2:-6002449 | MS.gene55718:CDS |
| TCTCTTCACATGCTGGTTCA+AGG | 0.464065 | 4.2:-6001378 | MS.gene55718:CDS |
| ATGTACAGTGTGCTGAAGTA+TGG | 0.466560 | 4.2:-6002387 | MS.gene55718:CDS |
| ACCTATCAGGTATTGAATGC+TGG | 0.476448 | 4.2:-5999334 | MS.gene55718:intron |
| TTCTCATAAATTACCACGAA+AGG | 0.478217 | 4.2:-6001961 | MS.gene55718:CDS |
| ATAGTTCTACCTTGTGGTGC+CGG | 0.479656 | 4.2:-6003064 | MS.gene55718:CDS |
| CTCTTCTCTTGATATGGCCG+TGG | 0.488835 | 4.2:+6003507 | None:intergenic |
| AGTGCAATGTCAGGTGCAAA+AGG | 0.493706 | 4.2:-5999226 | MS.gene55718:CDS |
| GCGTCTGGGTCGTATTCTTA+GGG | 0.498202 | 4.2:-6001341 | MS.gene55718:CDS |
| ATTCAGATCTCTTCACATGC+TGG | 0.501954 | 4.2:-6001385 | MS.gene55718:CDS |
| CAATGATATATGGTGCTACA+AGG | 0.508056 | 4.2:-6001862 | MS.gene55718:intron |
| GGATGGTTTATGTGGAGTAC+AGG | 0.509532 | 4.2:-5999204 | MS.gene55718:CDS |
| TGGTTGGATCTTGTAAAAGG+TGG | 0.512861 | 4.2:-6002421 | MS.gene55718:CDS |
| AACGGCATATTTGTTCATCT+CGG | 0.521437 | 4.2:+6002924 | None:intergenic |
| GGATCGATGAGTGCAATGTC+AGG | 0.522160 | 4.2:-5999235 | MS.gene55718:CDS |
| TCTCATAAATTACCACGAAA+GGG | 0.522463 | 4.2:-6001960 | MS.gene55718:CDS |
| ACTGTATGAGGCAAATTGGT+TGG | 0.524427 | 4.2:-6002437 | MS.gene55718:CDS |
| ATAAATCTGTACCTGGGTAT+CGG | 0.525157 | 4.2:+6001007 | None:intergenic |
| CTTTGCTGTCAGATGTGAAA+CGG | 0.530400 | 4.2:+6002906 | None:intergenic |
| TGCCTTAAATTATCCCATGT+TGG | 0.531333 | 4.2:-6004230 | MS.gene55718:CDS |
| GAGAGATTCCGTGGTAACGC+TGG | 0.532353 | 4.2:-6002884 | MS.gene55718:CDS |
| TGCAGCTACACTTGTGAGAG+AGG | 0.532637 | 4.2:-6002500 | MS.gene55718:intron |
| AAAAGTGCTCGTCGTTCTCA+AGG | 0.533168 | 4.2:-5999256 | MS.gene55718:CDS |
| AAGCTGCTGAAACACCAACT+AGG | 0.535810 | 4.2:+6003035 | None:intergenic |
| AAGCTTCAGGATAGGATGGC+TGG | 0.541968 | 4.2:-6001074 | MS.gene55718:CDS |
| GAAATAAGAAACAGAGAATG+GGG | 0.543248 | 4.2:-6002788 | MS.gene55718:CDS |
| TGCAAAAGGGATGGTTTATG+TGG | 0.544520 | 4.2:-5999212 | MS.gene55718:CDS |
| AGAGAACTCCAAGAAGAGAC+AGG | 0.548803 | 4.2:-6002323 | MS.gene55718:intron |
| AGCTTGCCTCCATCTGATGA+AGG | 0.551771 | 4.2:-5999471 | MS.gene55718:CDS |
| CCTGGGTATCGGTCGACACA+AGG | 0.553236 | 4.2:+6001018 | None:intergenic |
| ATGCTGTCTCTGTGGATCAG+TGG | 0.555068 | 4.2:-6002976 | MS.gene55718:CDS |
| CACCATATATCATTGGTTTG+CGG | 0.555102 | 4.2:+6001870 | None:intergenic |
| CGTCAAGAAGCACAGCGTCT+GGG | 0.556542 | 4.2:-6001355 | MS.gene55718:CDS |
| CCTTGTGTCGACCGATACCC+AGG | 0.557821 | 4.2:-6001018 | MS.gene55718:intron |
| GCGGAGTTTCATGGCATACT+CGG | 0.559802 | 4.2:+6001889 | None:intergenic |
| CTAAATCTCACTGCAAACTT+GGG | 0.561239 | 4.2:-6002609 | MS.gene55718:CDS |
| ACAAGGTAGAACTATGATAC+CGG | 0.568352 | 4.2:+6003072 | None:intergenic |
| AAGTCATACTCCTCCAACAT+GGG | 0.569092 | 4.2:+6004217 | None:intergenic |
| TATGGCCGTGGTTGTGCTTG+GGG | 0.571603 | 4.2:+6003519 | None:intergenic |
| TATCATATCAGGCAATAAAG+AGG | 0.573764 | 4.2:+5999173 | None:intergenic |
| TTATGAGAAACTCACATGCT+CGG | 0.574806 | 4.2:+6001975 | None:intergenic |
| AGCTGCTGAAACACCAACTA+GGG | 0.575072 | 4.2:+6003036 | None:intergenic |
| CCTTCAGGTAGAGCAAGATC+CGG | 0.580416 | 4.2:-6003091 | MS.gene55718:intron |
| GGGATTGCTGCTTATGGACG+AGG | 0.585259 | 4.2:-6002768 | MS.gene55718:intron |
| GGGTCGTATTCTTAGGGCAA+AGG | 0.588925 | 4.2:-6001335 | MS.gene55718:intron |
| AGATGTATTACTCAACTAAG+AGG | 0.589026 | 4.2:-6000868 | MS.gene55718:CDS |
| GGGAAAGCTTCAGGATAGGA+TGG | 0.590165 | 4.2:-6001078 | MS.gene55718:CDS |
| AATGCTGGTGATGATGCAGT+TGG | 0.591042 | 4.2:-5999319 | MS.gene55718:CDS |
| TTATTTGCAGCCATGTTGAG+AGG | 0.593332 | 4.2:-6001762 | MS.gene55718:intron |
| GATGATCAACTGGCACTACT+CGG | 0.594721 | 4.2:-5999423 | MS.gene55718:CDS |
| CTTAAATTATCCCATGTTGG+AGG | 0.600247 | 4.2:-6004227 | MS.gene55718:CDS |
| GGTGCCGGAAAGTCCCTAGT+TGG | 0.612274 | 4.2:-6003049 | MS.gene55718:CDS |
| TAAAGCCCCAAGCACAACCA+CGG | 0.615153 | 4.2:-6003524 | MS.gene55718:CDS |
| GGCAACAAATGCTGTCTCTG+TGG | 0.616726 | 4.2:-6002984 | MS.gene55718:CDS |
| GGGGCTTTAGTTCCATCTCG+AGG | 0.618388 | 4.2:+6003538 | None:intergenic |
| AAGCGAGATCCTTCATCAGA+TGG | 0.620834 | 4.2:+5999462 | None:intergenic |
| AATGTCAGGTGCAAAAGGGA+TGG | 0.623263 | 4.2:-5999221 | MS.gene55718:CDS |
| TCAACTGGCACTACTCGGAA+AGG | 0.628539 | 4.2:-5999418 | MS.gene55718:intron |
| CAACAACTCCAGCGTTACCA+CGG | 0.635366 | 4.2:+6002876 | None:intergenic |
| TAGGATGGCTGGTGGCAAAG+AGG | 0.635488 | 4.2:-6001063 | MS.gene55718:CDS |
| GAAGTCATACTCCTCCAACA+TGG | 0.636793 | 4.2:+6004216 | None:intergenic |
| GGCAGGGAAAGCTTCAGGAT+AGG | 0.638026 | 4.2:-6001082 | MS.gene55718:intron |
| GGTGAACCCAGACCTCGAGA+TGG | 0.640415 | 4.2:-6003550 | MS.gene55718:CDS |
| GGTATCATAGTTCTACCTTG+TGG | 0.642998 | 4.2:-6003070 | MS.gene55718:CDS |
| CGAGATCCTTCATCAGATGG+AGG | 0.648662 | 4.2:+5999465 | None:intergenic |
| GCATGATAAACAGGTGCACG+TGG | 0.651390 | 4.2:-6002668 | MS.gene55718:intron |
| GTGCAATGTCAGGTGCAAAA+GGG | 0.652794 | 4.2:-5999225 | MS.gene55718:CDS |
| GACAGCAAAGAGAGATTCCG+TGG | 0.654068 | 4.2:-6002893 | MS.gene55718:CDS |
| AGGGACTTTCCGGCACCACA+AGG | 0.657347 | 4.2:+6003055 | None:intergenic |
| CTGGGTATCGGTCGACACAA+GGG | 0.670656 | 4.2:+6001019 | None:intergenic |
| AATTACCACGAAAGGGCACG+TGG | 0.685034 | 4.2:-6001953 | MS.gene55718:CDS |
| CTTCAGGATAGGATGGCTGG+TGG | 0.687755 | 4.2:-6001071 | MS.gene55718:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATAATTGAAATGAA+TGG | + | chr4.2:5999371-5999390 | None:intergenic | 10.0% |
| !! | AATCAAATAACATTATATAT+AGG | - | chr4.2:5999744-5999763 | MS.gene55718:intron | 10.0% |
| !! | AATCTTTAGTTAAAATTATA+AGG | - | chr4.2:6001164-6001183 | MS.gene55718:intron | 10.0% |
| !!! | AAAAAAAAAACACTTTTTTT+GGG | - | chr4.2:6002972-6002991 | MS.gene55718:CDS | 10.0% |
| !!! | ATATATAATGTTATTTGATT+GGG | + | chr4.2:5999744-5999763 | None:intergenic | 10.0% |
| !!! | ATTTCAAAAAAATAGATTTT+GGG | + | chr4.2:6002916-6002935 | None:intergenic | 10.0% |
| !!! | TAAAAAAAAAACACTTTTTT+TGG | - | chr4.2:6002971-6002990 | MS.gene55718:CDS | 10.0% |
| !!! | TATATATAATGTTATTTGAT+TGG | + | chr4.2:5999745-5999764 | None:intergenic | 10.0% |
| !!! | TATTTCAAAAAAATAGATTT+TGG | + | chr4.2:6002917-6002936 | None:intergenic | 10.0% |
| !! | AAAATAAAACTAAAGAAAAC+AGG | + | chr4.2:6001775-6001794 | None:intergenic | 15.0% |
| !! | ATAAAAAAAAGATGTTAACA+TGG | + | chr4.2:6001941-6001960 | None:intergenic | 15.0% |
| !! | ATCCAATAATCAATAATATA+TGG | + | chr4.2:6002472-6002491 | None:intergenic | 15.0% |
| !! | ATTCAAATTCATGAATTAAA+TGG | - | chr4.2:6002339-6002358 | MS.gene55718:CDS | 15.0% |
| !!! | AAATTTAGAATTCAATATGT+AGG | + | chr4.2:6002221-6002240 | None:intergenic | 15.0% |
| !!! | AATTTAAAATAAAATTTGCC+GGG | + | chr4.2:6000054-6000073 | None:intergenic | 15.0% |
| !!! | ATAGTTTTTTTATATGTAAC+AGG | - | chr4.2:6003940-6003959 | MS.gene55718:intron | 15.0% |
| !!! | ATCTATTTTTTTGAAATACA+AGG | - | chr4.2:6002919-6002938 | MS.gene55718:CDS | 15.0% |
| !!! | CAATTTAAAATAAAATTTGC+CGG | + | chr4.2:6000055-6000074 | None:intergenic | 15.0% |
| !!! | CGTTTGTTTTAATTTTTTTA+GGG | - | chr4.2:6002775-6002794 | MS.gene55718:CDS | 15.0% |
| !!! | TGTCTAAAATATTATGTTAA+CGG | - | chr4.2:6000194-6000213 | MS.gene55718:intron | 15.0% |
| !!! | TTTTCTTTAGTTTTATTTTG+AGG | - | chr4.2:6001776-6001795 | MS.gene55718:intron | 15.0% |
| !!! | TTTTTTTTTAGTGTTTGTTT+AGG | - | chr4.2:6002819-6002838 | MS.gene55718:CDS | 15.0% |
| !! | AATACTTAAACTATCATTCA+AGG | - | chr4.2:6002511-6002530 | MS.gene55718:intron | 20.0% |
| !! | ACTTACTTTAAATTAGACAA+AGG | + | chr4.2:6003183-6003202 | None:intergenic | 20.0% |
| !! | ACTTTATATATAGGTATATG+TGG | + | chr4.2:5999638-5999657 | None:intergenic | 20.0% |
| !! | CAAAAAATCAGTCATTTAAT+TGG | + | chr4.2:5999415-5999434 | None:intergenic | 20.0% |
| !! | CATATACCTATATATAAAGT+TGG | - | chr4.2:5999638-5999657 | MS.gene55718:intron | 20.0% |
| !! | GTTAATACTATTGATATTGT+GGG | - | chr4.2:6001910-6001929 | MS.gene55718:CDS | 20.0% |
| !! | GTTATTATCTTGCAAATTTA+TGG | - | chr4.2:5999814-5999833 | MS.gene55718:intron | 20.0% |
| !! | TATCTATACCTTTGTATAAA+GGG | - | chr4.2:5999306-5999325 | MS.gene55718:CDS | 20.0% |
| !! | TGTTAATACTATTGATATTG+TGG | - | chr4.2:6001909-6001928 | MS.gene55718:CDS | 20.0% |
| !! | TTATCTATACCTTTGTATAA+AGG | - | chr4.2:5999305-5999324 | MS.gene55718:CDS | 20.0% |
| !!! | AACTTATTTTTAATGCTCAA+TGG | - | chr4.2:6003810-6003829 | MS.gene55718:intron | 20.0% |
| !!! | AATGAGTAAAAGCTTTTATT+TGG | - | chr4.2:6003324-6003343 | MS.gene55718:intron | 20.0% |
| !!! | AGAGGATTTTTTTTTTTTGT+TGG | + | chr4.2:6000122-6000141 | None:intergenic | 20.0% |
| !!! | AGGTATTTTCTTTCAATTTT+CGG | - | chr4.2:6002631-6002650 | MS.gene55718:CDS | 20.0% |
| !!! | GCGTTTGTTTTAATTTTTTT+AGG | - | chr4.2:6002774-6002793 | MS.gene55718:CDS | 20.0% |
| !!! | GTCTAAAATATTATGTTAAC+GGG | - | chr4.2:6000195-6000214 | MS.gene55718:intron | 20.0% |
| !!! | TATTTTTTTGAAATACAAGG+AGG | - | chr4.2:6002922-6002941 | MS.gene55718:CDS | 20.0% |
| !!! | TCTAAAATATTATGTTAACG+GGG | - | chr4.2:6000196-6000215 | MS.gene55718:intron | 20.0% |
| !!! | TGAGAATTTGAAATTTTTGT+TGG | - | chr4.2:6003875-6003894 | MS.gene55718:intron | 20.0% |
| !!! | TTATTGGTTTAAATCATTGT+GGG | - | chr4.2:5999506-5999525 | MS.gene55718:intron | 20.0% |
| !!! | TTGTCTAATTTAAAGTAAGT+TGG | - | chr4.2:6003183-6003202 | MS.gene55718:intron | 20.0% |
| !!! | TTTATTGGTTTAAATCATTG+TGG | - | chr4.2:5999505-5999524 | MS.gene55718:intron | 20.0% |
| ! | AAATTCATGAATTAAATGGC+AGG | - | chr4.2:6002343-6002362 | MS.gene55718:CDS | 25.0% |
| ! | AAATTTCAAATTCTCAAGCA+TGG | + | chr4.2:6003871-6003890 | None:intergenic | 25.0% |
| ! | AAGAAATAAGAAACAGAGAA+TGG | - | chr4.2:6000652-6000671 | MS.gene55718:intron | 25.0% |
| ! | AATTCATGAATTAAATGGCA+GGG | - | chr4.2:6002344-6002363 | MS.gene55718:CDS | 25.0% |
| ! | ACATTATATATAGGCATATG+AGG | - | chr4.2:5999753-5999772 | MS.gene55718:intron | 25.0% |
| ! | AGAAATAAGAAACAGAGAAT+GGG | - | chr4.2:6000653-6000672 | MS.gene55718:intron | 25.0% |
| ! | AGTAATGCTTTATATACTCA+TGG | - | chr4.2:5999264-5999283 | MS.gene55718:CDS | 25.0% |
| ! | ATCTATACCTTTGTATAAAG+GGG | - | chr4.2:5999307-5999326 | MS.gene55718:CDS | 25.0% |
| ! | ATCTTGCAAATTTATGGTAA+TGG | - | chr4.2:5999820-5999839 | MS.gene55718:intron | 25.0% |
| ! | ATTTGGATTCATCACATAAA+GGG | + | chr4.2:6001442-6001461 | None:intergenic | 25.0% |
| ! | CATTCTTACCTTGTTAAATT+TGG | - | chr4.2:6000024-6000043 | MS.gene55718:intron | 25.0% |
| ! | CTAATTGAAATTGTTTCACT+AGG | + | chr4.2:6003215-6003234 | None:intergenic | 25.0% |
| ! | CTTAATTACTTAAACAACAG+TGG | - | chr4.2:6000267-6000286 | MS.gene55718:intron | 25.0% |
| ! | CTTAGTAAAATGTTTGGAAA+TGG | - | chr4.2:5999959-5999978 | MS.gene55718:intron | 25.0% |
| ! | GAGGTAATTGTTAAGATTTA+TGG | - | chr4.2:6000693-6000712 | MS.gene55718:intron | 25.0% |
| ! | GTAAACAAACAAAATAGCTT+CGG | - | chr4.2:6002997-6003016 | MS.gene55718:CDS | 25.0% |
| ! | TAAAATGTTTGGAAATGGTA+TGG | - | chr4.2:5999964-5999983 | MS.gene55718:intron | 25.0% |
| ! | TAGAATTCAATATGTAGGAT+GGG | + | chr4.2:6002216-6002235 | None:intergenic | 25.0% |
| ! | TATGACAACAACAAATTAAG+AGG | + | chr4.2:6000140-6000159 | None:intergenic | 25.0% |
| ! | TATTTGGATTCATCACATAA+AGG | + | chr4.2:6001443-6001462 | None:intergenic | 25.0% |
| ! | TGACTCAAATGAAAACTATT+AGG | - | chr4.2:6002880-6002899 | MS.gene55718:CDS | 25.0% |
| ! | TGCTTTGTATATTTCAAGAA+GGG | + | chr4.2:6003280-6003299 | None:intergenic | 25.0% |
| ! | TGTTAGGAAAAAATAAGAAG+AGG | - | chr4.2:6003533-6003552 | MS.gene55718:CDS | 25.0% |
| ! | TGTTGTGACAACATATAATA+TGG | - | chr4.2:6000584-6000603 | MS.gene55718:intron | 25.0% |
| ! | TTAATATCCCCTTTATACAA+AGG | + | chr4.2:5999317-5999336 | None:intergenic | 25.0% |
| ! | TTAGAATTCAATATGTAGGA+TGG | + | chr4.2:6002217-6002236 | None:intergenic | 25.0% |
| ! | TTGCTTTGTATATTTCAAGA+AGG | + | chr4.2:6003281-6003300 | None:intergenic | 25.0% |
| ! | TTGGTACCAACTTTATATAT+AGG | + | chr4.2:5999647-5999666 | None:intergenic | 25.0% |
| ! | TTTGTACATTTACTTTACTG+TGG | - | chr4.2:6002702-6002721 | MS.gene55718:intron | 25.0% |
| !! | AATGACTTTTCGAAACATAT+GGG | + | chr4.2:6000806-6000825 | None:intergenic | 25.0% |
| !! | CATTTCCAAACATTTTACTA+AGG | + | chr4.2:5999961-5999980 | None:intergenic | 25.0% |
| !! | GGCCATATATTATTGATTAT+TGG | - | chr4.2:6002467-6002486 | MS.gene55718:CDS | 25.0% |
| !! | GTATCTTGGAAATATCATTT+TGG | - | chr4.2:6003659-6003678 | MS.gene55718:intron | 25.0% |
| !! | TAAATTTCATTTGTTTGCTG+TGG | - | chr4.2:6002234-6002253 | MS.gene55718:intron | 25.0% |
| !! | TAATGACTTTTCGAAACATA+TGG | + | chr4.2:6000807-6000826 | None:intergenic | 25.0% |
| !! | TCTAATACTCACTCTTTTAT+TGG | - | chr4.2:5999490-5999509 | MS.gene55718:intron | 25.0% |
| !!! | AAAATTATAAGGAGCATTTG+TGG | - | chr4.2:6001175-6001194 | MS.gene55718:intron | 25.0% |
| !!! | AAATACTGTTTTTCTTTCCA+AGG | - | chr4.2:6001741-6001760 | MS.gene55718:CDS | 25.0% |
| !!! | AACTTCTTTTAAGTAGGTTA+TGG | + | chr4.2:6003257-6003276 | None:intergenic | 25.0% |
| !!! | ACATATAATATGGTTGCTTT+TGG | - | chr4.2:6000594-6000613 | MS.gene55718:intron | 25.0% |
| !!! | AGTATTAACAAGAAGTACTA+AGG | + | chr4.2:6001899-6001918 | None:intergenic | 25.0% |
| !!! | ATATAATATGGTTGCTTTTG+GGG | - | chr4.2:6000596-6000615 | MS.gene55718:intron | 25.0% |
| !!! | CAGAGCTATTTTCAATTTTA+AGG | - | chr4.2:5999789-5999808 | MS.gene55718:intron | 25.0% |
| !!! | CAGCAATTTTTAATTGATCA+AGG | - | chr4.2:6002597-6002616 | MS.gene55718:intron | 25.0% |
| !!! | CATATAATATGGTTGCTTTT+GGG | - | chr4.2:6000595-6000614 | MS.gene55718:intron | 25.0% |
| !!! | GTATGGTAACTTGTTTTTAT+TGG | - | chr4.2:6002179-6002198 | MS.gene55718:intron | 25.0% |
| AAAAAAGAGCTGTCTTTGTT+TGG | - | chr4.2:6000437-6000456 | MS.gene55718:intron | 30.0% | |
| AAAATTGAACCCACACAAAA+TGG | - | chr4.2:5999540-5999559 | MS.gene55718:intron | 30.0% | |
| AAATGAGATTGTAGGCTTAA+AGG | - | chr4.2:6003464-6003483 | MS.gene55718:intron | 30.0% | |
| AAATTACCACAAGTGCAATA+GGG | + | chr4.2:6002663-6002682 | None:intergenic | 30.0% | |
| AACATAAATTCCTCACAACA+TGG | + | chr4.2:6003517-6003536 | None:intergenic | 30.0% | |
| AACTCAATTCCAATTCAACA+GGG | + | chr4.2:6004063-6004082 | None:intergenic | 30.0% | |
| AAGAACAGAAAGAAGATTTC+AGG | + | chr4.2:6000740-6000759 | None:intergenic | 30.0% | |
| AAGAGCCTTAGTAAAATGTT+TGG | - | chr4.2:5999953-5999972 | MS.gene55718:intron | 30.0% | |
| AAGTTACCATACATACAACA+GGG | + | chr4.2:6002171-6002190 | None:intergenic | 30.0% | |
| AATAACACATTGACAGCATT+AGG | + | chr4.2:6002729-6002748 | None:intergenic | 30.0% | |
| AATATTATGTTAACGGGGTT+TGG | - | chr4.2:6000201-6000220 | MS.gene55718:intron | 30.0% | |
| AATGAGATTGTAGGCTTAAA+GGG | - | chr4.2:6003465-6003484 | MS.gene55718:intron | 30.0% | |
| AATTGGTTGGATCTTGTAAA+AGG | - | chr4.2:6001018-6001037 | MS.gene55718:intron | 30.0% | |
| ACAAATTCATGTGAATCTTG+AGG | + | chr4.2:6002687-6002706 | None:intergenic | 30.0% | |
| ACATGAAATAAATCTGTACC+TGG | + | chr4.2:6002445-6002464 | None:intergenic | 30.0% | |
| ACTATCATTCAAGGAGTTTA+TGG | - | chr4.2:6002520-6002539 | MS.gene55718:intron | 30.0% | |
| AGAATAAAAGAAACGATGCA+AGG | + | chr4.2:6001992-6002011 | None:intergenic | 30.0% | |
| AGATGTATTACTCAACTAAG+AGG | - | chr4.2:6002574-6002593 | MS.gene55718:intron | 30.0% | |
| AGTAGCAATTAAAAGACAGA+AGG | + | chr4.2:6003757-6003776 | None:intergenic | 30.0% | |
| AGTTGTCTTCATGCAATATT+TGG | + | chr4.2:6003794-6003813 | None:intergenic | 30.0% | |
| ATACATTGCAGTTTCTGTTT+AGG | - | chr4.2:6001220-6001239 | MS.gene55718:intron | 30.0% | |
| ATATCCTTACGAGTTTCATT+AGG | - | chr4.2:6001835-6001854 | MS.gene55718:intron | 30.0% | |
| CATGAAATAAATCTGTACCT+GGG | + | chr4.2:6002444-6002463 | None:intergenic | 30.0% | |
| GAAATAAGAAACAGAGAATG+GGG | - | chr4.2:6000654-6000673 | MS.gene55718:intron | 30.0% | |
| GGAAAAAATAAGAAGAGGAA+TGG | - | chr4.2:6003538-6003557 | MS.gene55718:CDS | 30.0% | |
| GTACAGATTTATTTCATGTC+AGG | - | chr4.2:6002446-6002465 | MS.gene55718:CDS | 30.0% | |
| TCTCATAAATTACCACGAAA+GGG | - | chr4.2:6001482-6001501 | MS.gene55718:intron | 30.0% | |
| TGAATTATCACATTTGCTTC+AGG | + | chr4.2:6002042-6002061 | None:intergenic | 30.0% | |
| TGTTGTGAGGAATTTATGTT+AGG | - | chr4.2:6003517-6003536 | MS.gene55718:CDS | 30.0% | |
| TTATTTCCCTGTTGTATGTA+TGG | - | chr4.2:6002162-6002181 | MS.gene55718:intron | 30.0% | |
| TTCTCATAAATTACCACGAA+AGG | - | chr4.2:6001481-6001500 | MS.gene55718:intron | 30.0% | |
| TTGGGCAAGAATGATTATTT+GGG | - | chr4.2:6002750-6002769 | MS.gene55718:intron | 30.0% | |
| TTTAAGCCTACAATCTCATT+TGG | + | chr4.2:6003465-6003484 | None:intergenic | 30.0% | |
| TTTGGGCAAGAATGATTATT+TGG | - | chr4.2:6002749-6002768 | MS.gene55718:intron | 30.0% | |
| ! | AAAAGCTTTTACTCATTCAC+AGG | + | chr4.2:6003321-6003340 | None:intergenic | 30.0% |
| ! | ATGGGATAATTTAAGGCATT+TGG | + | chr4.2:5999210-5999229 | None:intergenic | 30.0% |
| ! | ATTGAGAAATTTGAGACTGA+GGG | - | chr4.2:6003623-6003642 | MS.gene55718:intron | 30.0% |
| ! | GCGAAAAATTCTTTTGTCAT+TGG | + | chr4.2:6001084-6001103 | None:intergenic | 30.0% |
| ! | TATTGAGAAATTTGAGACTG+AGG | - | chr4.2:6003622-6003641 | MS.gene55718:intron | 30.0% |
| ! | TTTTTCTCTCTTTTTCCTAC+AGG | - | chr4.2:5999871-5999890 | MS.gene55718:intron | 30.0% |
| !! | ATTAGGTTTGTTGAAGGAAA+TGG | - | chr4.2:6003406-6003425 | MS.gene55718:intron | 30.0% |
| !! | GTAAAAGCTTTTATTTGGTG+CGG | - | chr4.2:6003329-6003348 | MS.gene55718:intron | 30.0% |
| !! | TGGAAATATCATTTTGGTGT+TGG | - | chr4.2:6003665-6003684 | MS.gene55718:intron | 30.0% |
| !!! | AAAGACAGCTCTTTTTTATC+CGG | + | chr4.2:6000434-6000453 | None:intergenic | 30.0% |
| !!! | ATCATTTTGGTGTTGGTTAT+GGG | - | chr4.2:6003672-6003691 | MS.gene55718:intron | 30.0% |
| !!! | GCTGTCAATGTGTTATTTTT+GGG | - | chr4.2:6002732-6002751 | MS.gene55718:intron | 30.0% |
| !!! | TATAATATGGTTGCTTTTGG+GGG | - | chr4.2:6000597-6000616 | MS.gene55718:intron | 30.0% |
| !!! | TATCATTTTGGTGTTGGTTA+TGG | - | chr4.2:6003671-6003690 | MS.gene55718:intron | 30.0% |
| !!! | TGCTGTCAATGTGTTATTTT+TGG | - | chr4.2:6002731-6002750 | MS.gene55718:intron | 30.0% |
| AAAGAAGATTTCAGGCAAGA+AGG | + | chr4.2:6000732-6000751 | None:intergenic | 35.0% | |
| AACAGTATTTACGTCTTTGC+TGG | + | chr4.2:6001731-6001750 | None:intergenic | 35.0% | |
| AACGGCATATTTGTTCATCT+CGG | + | chr4.2:6000521-6000540 | None:intergenic | 35.0% | |
| AAGATTTACATAGTTCCCAG+AGG | + | chr4.2:6001150-6001169 | None:intergenic | 35.0% | |
| ACAAGGTAGAACTATGATAC+CGG | + | chr4.2:6000373-6000392 | None:intergenic | 35.0% | |
| ACAGAAACTGCAATGTATCA+TGG | + | chr4.2:6001218-6001237 | None:intergenic | 35.0% | |
| ACAGAAGGATGAAGATTGAA+TGG | + | chr4.2:6003742-6003761 | None:intergenic | 35.0% | |
| ACAGATCTGAACTTCCTAAT+TGG | - | chr4.2:6000976-6000995 | MS.gene55718:intron | 35.0% | |
| ACTAAATCTCACTGCAAACT+TGG | - | chr4.2:6000832-6000851 | MS.gene55718:CDS | 35.0% | |
| ACTCTCTAACACTCTCTTAT+TGG | + | chr4.2:5999587-5999606 | None:intergenic | 35.0% | |
| ATAAATCTGTACCTGGGTAT+CGG | + | chr4.2:6002438-6002457 | None:intergenic | 35.0% | |
| ATTATTTCACTCAGCAGAAG+AGG | + | chr4.2:6000913-6000932 | None:intergenic | 35.0% | |
| ATTCGAACAAACAAGCAACT+TGG | + | chr4.2:6003368-6003387 | None:intergenic | 35.0% | |
| CAAATTACCACAAGTGCAAT+AGG | + | chr4.2:6002664-6002683 | None:intergenic | 35.0% | |
| CAACTCAATTCCAATTCAAC+AGG | + | chr4.2:6004064-6004083 | None:intergenic | 35.0% | |
| CAAGTTACCATACATACAAC+AGG | + | chr4.2:6002172-6002191 | None:intergenic | 35.0% | |
| CAATTTGCCTCATACAGTTT+GGG | + | chr4.2:6001003-6001022 | None:intergenic | 35.0% | |
| CTAAATAGCGTTTACCTATC+AGG | - | chr4.2:6004095-6004114 | MS.gene55718:intron | 35.0% | |
| CTAAATCTCACTGCAAACTT+GGG | - | chr4.2:6000833-6000852 | MS.gene55718:CDS | 35.0% | |
| CTAACCTAATGAAACTCGTA+AGG | + | chr4.2:6001842-6001861 | None:intergenic | 35.0% | |
| CTCCAACATGGGATAATTTA+AGG | + | chr4.2:5999217-5999236 | None:intergenic | 35.0% | |
| CTTAAATTATCCCATGTTGG+AGG | - | chr4.2:5999215-5999234 | MS.gene55718:CDS | 35.0% | |
| CTTGTAGCACCATATATCAT+TGG | + | chr4.2:6001582-6001601 | None:intergenic | 35.0% | |
| CTTGTTAAATTTGGAGAACC+CGG | - | chr4.2:6000033-6000052 | MS.gene55718:intron | 35.0% | |
| TCACATGCTCGGAATTTATT+TGG | + | chr4.2:6001459-6001478 | None:intergenic | 35.0% | |
| TCTTCATGCAATATTTGGCA+CGG | + | chr4.2:6003789-6003808 | None:intergenic | 35.0% | |
| TGAATTCAAGCAAGTGAACT+AGG | + | chr4.2:6001310-6001329 | None:intergenic | 35.0% | |
| TGAGAGGACAAAAATTCTAC+AGG | - | chr4.2:6001696-6001715 | MS.gene55718:intron | 35.0% | |
| TGATCAAGGTTACAGCTTTA+AGG | - | chr4.2:6002611-6002630 | MS.gene55718:CDS | 35.0% | |
| TGCCTTAAATTATCCCATGT+TGG | - | chr4.2:5999212-5999231 | MS.gene55718:CDS | 35.0% | |
| TGTTGGAACAATACTGACAT+GGG | + | chr4.2:6000105-6000124 | None:intergenic | 35.0% | |
| TTATGAGAAACTCACATGCT+CGG | + | chr4.2:6001470-6001489 | None:intergenic | 35.0% | |
| TTCAATATGTAGGATGGGTA+TGG | + | chr4.2:6002211-6002230 | None:intergenic | 35.0% | |
| TTGTTGATCATTACATGTGC+AGG | - | chr4.2:6001416-6001435 | MS.gene55718:CDS | 35.0% | |
| TTGTTGGAACAATACTGACA+TGG | + | chr4.2:6000106-6000125 | None:intergenic | 35.0% | |
| ! | AAGTACTCTAGGAAGACATT+AGG | - | chr4.2:6003389-6003408 | MS.gene55718:intron | 35.0% |
| ! | CGTTTCTTTTATTCTCAGGT+TGG | - | chr4.2:6001997-6002016 | MS.gene55718:CDS | 35.0% |
| ! | GAATTTTTGTCCTCTCAACA+TGG | + | chr4.2:6001693-6001712 | None:intergenic | 35.0% |
| ! | GCATCGTTTCTTTTATTCTC+AGG | - | chr4.2:6001993-6002012 | MS.gene55718:CDS | 35.0% |
| ! | GGGCTTTTCAGTTTAAACTA+TGG | - | chr4.2:6000487-6000506 | MS.gene55718:intron | 35.0% |
| ! | TCATGGTGTTGAAATCTTTG+AGG | - | chr4.2:5999281-5999300 | MS.gene55718:CDS | 35.0% |
| ! | TTGTGTGGGTTCAATTTTCA+AGG | + | chr4.2:5999538-5999557 | None:intergenic | 35.0% |
| ! | TTGTTCGAATGAAGTACTCT+AGG | - | chr4.2:6003378-6003397 | MS.gene55718:intron | 35.0% |
| !! | ATAAAGTTGGTACCAAGTTC+TGG | - | chr4.2:5999651-5999670 | MS.gene55718:intron | 35.0% |
| !! | ATTTGTTTGCTGTGGAAAGT+GGG | - | chr4.2:6002242-6002261 | MS.gene55718:intron | 35.0% |
| !! | CAATGATATATGGTGCTACA+AGG | - | chr4.2:6001580-6001599 | MS.gene55718:intron | 35.0% |
| !! | CACCATATATCATTGGTTTG+CGG | + | chr4.2:6001575-6001594 | None:intergenic | 35.0% |
| !! | GAAGACATTAGGTTTGTTGA+AGG | - | chr4.2:6003400-6003419 | MS.gene55718:intron | 35.0% |
| !! | GAAGGGAACTTCTTTTAAGT+AGG | + | chr4.2:6003263-6003282 | None:intergenic | 35.0% |
| !!! | AAGACAGCTCTTTTTTATCC+GGG | + | chr4.2:6000433-6000452 | None:intergenic | 35.0% |
| !!! | GTCTTTTGAAGCTGTGTTTT+GGG | - | chr4.2:6001623-6001642 | MS.gene55718:intron | 35.0% |
| !!! | TCTTTTGAAGCTGTGTTTTG+GGG | - | chr4.2:6001624-6001643 | MS.gene55718:intron | 35.0% |
| AAAAAAACCTGCTCGAACTG+TGG | - | chr4.2:6003837-6003856 | MS.gene55718:intron | 40.0% | |
| AAATTCTCAAGCATGGCATC+GGG | + | chr4.2:6003864-6003883 | None:intergenic | 40.0% | |
| AACAACTACACACCAGAACT+TGG | + | chr4.2:5999666-5999685 | None:intergenic | 40.0% | |
| AAGTCATACTCCTCCAACAT+GGG | + | chr4.2:5999228-5999247 | None:intergenic | 40.0% | |
| AATTCCTCACAACATGGTCT+TGG | + | chr4.2:6003511-6003530 | None:intergenic | 40.0% | |
| AATTGGTCCCAAACTGTATG+AGG | - | chr4.2:6000993-6001012 | MS.gene55718:intron | 40.0% | |
| ACCAGCATTCAATACCTGAT+AGG | + | chr4.2:6004112-6004131 | None:intergenic | 40.0% | |
| ACTGTATGAGGCAAATTGGT+TGG | - | chr4.2:6001005-6001024 | MS.gene55718:intron | 40.0% | |
| ATGTACAGTGTGCTGAAGTA+TGG | - | chr4.2:6001055-6001074 | MS.gene55718:CDS | 40.0% | |
| ATGTTTGGAAATGGTATGGC+TGG | - | chr4.2:5999968-5999987 | MS.gene55718:intron | 40.0% | |
| ATTCAGATCTCTTCACATGC+TGG | - | chr4.2:6002057-6002076 | MS.gene55718:intron | 40.0% | |
| ATTGAACCCACACAAAATGG+TGG | - | chr4.2:5999543-5999562 | MS.gene55718:intron | 40.0% | |
| CAAATTCTCAAGCATGGCAT+CGG | + | chr4.2:6003865-6003884 | None:intergenic | 40.0% | |
| CAATTCAACAGGGATACAGA+TGG | + | chr4.2:6004053-6004072 | None:intergenic | 40.0% | |
| CAGAGAACATTGTTCTCTGT+AGG | - | chr4.2:6003695-6003714 | MS.gene55718:intron | 40.0% | |
| CATCTGTATCCCTGTTGAAT+TGG | - | chr4.2:6004051-6004070 | MS.gene55718:intron | 40.0% | |
| CCAAACTGTATGAGGCAAAT+TGG | - | chr4.2:6001001-6001020 | MS.gene55718:intron | 40.0% | |
| CCAATTTGCCTCATACAGTT+TGG | + | chr4.2:6001004-6001023 | None:intergenic | 40.0% | |
| CGGGTTCTCCAAATTTAACA+AGG | + | chr4.2:6000035-6000054 | None:intergenic | 40.0% | |
| CTAAGGCTCTTCTCTTGATA+TGG | + | chr4.2:5999944-5999963 | None:intergenic | 40.0% | |
| CTCCGCAAACCAATGATATA+TGG | - | chr4.2:6001570-6001589 | MS.gene55718:intron | 40.0% | |
| CTGTTCTTATCCATCGTACA+TGG | - | chr4.2:6000752-6000771 | MS.gene55718:intron | 40.0% | |
| CTTCATGCAATATTTGGCAC+GGG | + | chr4.2:6003788-6003807 | None:intergenic | 40.0% | |
| GAAAACAGGAACAGATACCT+TGG | + | chr4.2:6001761-6001780 | None:intergenic | 40.0% | |
| GAATGGAAAGAATGCTGATG+CGG | - | chr4.2:6003555-6003574 | MS.gene55718:intron | 40.0% | |
| GATTGTAGGCTTAAAGGGAT+AGG | - | chr4.2:6003470-6003489 | MS.gene55718:intron | 40.0% | |
| GCATGTATAGATTGAGACCT+TGG | + | chr4.2:6003918-6003937 | None:intergenic | 40.0% | |
| GTTTATCATGCCATGTACGA+TGG | + | chr4.2:6000765-6000784 | None:intergenic | 40.0% | |
| TCATCATCTCGATGATCAAC+TGG | - | chr4.2:6004009-6004028 | MS.gene55718:intron | 40.0% | |
| TCGTACATGGCATGATAAAC+AGG | - | chr4.2:6000765-6000784 | MS.gene55718:intron | 40.0% | |
| TCTCAACATGGCTGCAAATA+AGG | + | chr4.2:6001681-6001700 | None:intergenic | 40.0% | |
| TGCAAAAGGGATGGTTTATG+TGG | - | chr4.2:6004230-6004249 | MS.gene55718:CDS | 40.0% | |
| TGGTTGGATCTTGTAAAAGG+TGG | - | chr4.2:6001021-6001040 | MS.gene55718:CDS | 40.0% | |
| TGTTCGCCAAATGAGATTGT+AGG | - | chr4.2:6003456-6003475 | MS.gene55718:intron | 40.0% | |
| TTATTTGCAGCCATGTTGAG+AGG | - | chr4.2:6001680-6001699 | MS.gene55718:intron | 40.0% | |
| TTGAACCCACACAAAATGGT+GGG | - | chr4.2:5999544-5999563 | MS.gene55718:intron | 40.0% | |
| ! | ACTTTTCGAAACATATGGGC+AGG | + | chr4.2:6000802-6000821 | None:intergenic | 40.0% |
| ! | AGACCTTGGCAAGATAGTTT+TGG | + | chr4.2:6003904-6003923 | None:intergenic | 40.0% |
| ! | CAATAATGCCTTTTGCCAGT+GGG | - | chr4.2:6002305-6002324 | MS.gene55718:intron | 40.0% |
| ! | CATACAGTTTGGGACCAATT+AGG | + | chr4.2:6000993-6001012 | None:intergenic | 40.0% |
| ! | CTTTGCTGTCAGATGTGAAA+CGG | + | chr4.2:6000539-6000558 | None:intergenic | 40.0% |
| ! | GGATTAGCATAACTTAGTGC+TGG | - | chr4.2:6000222-6000241 | MS.gene55718:intron | 40.0% |
| ! | GGTATCATAGTTCTACCTTG+TGG | - | chr4.2:6000372-6000391 | MS.gene55718:intron | 40.0% |
| ! | GTGTTGCTAGCATTACTCAT+AGG | + | chr4.2:5999454-5999473 | None:intergenic | 40.0% |
| ! | TATGTCCCACCATTTTGTGT+GGG | + | chr4.2:5999552-5999571 | None:intergenic | 40.0% |
| ! | TCAATAATGCCTTTTGCCAG+TGG | - | chr4.2:6002304-6002323 | MS.gene55718:intron | 40.0% |
| !! | ACCTATCAGGTATTGAATGC+TGG | - | chr4.2:6004108-6004127 | MS.gene55718:intron | 40.0% |
| !! | ATTGTGCTGCTTTCGTTTAC+AGG | - | chr4.2:6002551-6002570 | MS.gene55718:intron | 40.0% |
| !! | CATTTGTTTGCTGTGGAAAG+TGG | - | chr4.2:6002241-6002260 | MS.gene55718:intron | 40.0% |
| !!! | CGTCTTTTGAAGCTGTGTTT+TGG | - | chr4.2:6001622-6001641 | MS.gene55718:intron | 40.0% |
| AACACCAACTAGGGACTTTC+CGG | + | chr4.2:6000400-6000419 | None:intergenic | 45.0% | |
| AAGCGAGATCCTTCATCAGA+TGG | + | chr4.2:6003983-6004002 | None:intergenic | 45.0% | |
| AAGCTGCTGAAACACCAACT+AGG | + | chr4.2:6000410-6000429 | None:intergenic | 45.0% | |
| AATGTCAGGTGCAAAAGGGA+TGG | - | chr4.2:6004221-6004240 | MS.gene55718:CDS | 45.0% | |
| ACAGGTATGCTGTTATGCAC+TGG | - | chr4.2:6000859-6000878 | MS.gene55718:CDS | 45.0% | |
| AGAGAACTCCAAGAAGAGAC+AGG | - | chr4.2:6001119-6001138 | MS.gene55718:intron | 45.0% | |
| AGCTGCTGAAACACCAACTA+GGG | + | chr4.2:6000409-6000428 | None:intergenic | 45.0% | |
| AGTGCAATGTCAGGTGCAAA+AGG | - | chr4.2:6004216-6004235 | MS.gene55718:CDS | 45.0% | |
| ATGATCTTCACACATGCGCA+AGG | - | chr4.2:6001343-6001362 | MS.gene55718:CDS | 45.0% | |
| CCACCAAAACTATCTTGCCA+AGG | - | chr4.2:6003898-6003917 | MS.gene55718:intron | 45.0% | |
| GAAGTCATACTCCTCCAACA+TGG | + | chr4.2:5999229-5999248 | None:intergenic | 45.0% | |
| GATGATCAACTGGCACTACT+CGG | - | chr4.2:6004019-6004038 | MS.gene55718:intron | 45.0% | |
| GGATGGTTTATGTGGAGTAC+AGG | - | chr4.2:6004238-6004257 | MS.gene55718:CDS | 45.0% | |
| GTGCAATGTCAGGTGCAAAA+GGG | - | chr4.2:6004217-6004236 | MS.gene55718:CDS | 45.0% | |
| TAAATGGCAGGGAAAGCTTC+AGG | - | chr4.2:6002355-6002374 | MS.gene55718:CDS | 45.0% | |
| TTAGTTCCATCTCGAGGTCT+GGG | + | chr4.2:5999901-5999920 | None:intergenic | 45.0% | |
| ! | AATGCTGGTGATGATGCAGT+TGG | - | chr4.2:6004123-6004142 | MS.gene55718:intron | 45.0% |
| ! | AATTTGAGACTGAGGGAGTG+TGG | - | chr4.2:6003630-6003649 | MS.gene55718:intron | 45.0% |
| ! | AGAATGGGGATTGCTGCTTA+TGG | - | chr4.2:6000668-6000687 | MS.gene55718:intron | 45.0% |
| ! | ATAGTTCTACCTTGTGGTGC+CGG | - | chr4.2:6000378-6000397 | MS.gene55718:intron | 45.0% |
| ! | ATTTGAGACTGAGGGAGTGT+GGG | - | chr4.2:6003631-6003650 | MS.gene55718:intron | 45.0% |
| ! | CTTTTATCATCTGCCCCTTC+AGG | - | chr4.2:6000336-6000355 | MS.gene55718:intron | 45.0% |
| ! | GTATGTCCCACCATTTTGTG+TGG | + | chr4.2:5999553-5999572 | None:intergenic | 45.0% |
| ! | TTTAGTTCCATCTCGAGGTC+TGG | + | chr4.2:5999902-5999921 | None:intergenic | 45.0% |
| !! | AAAAGTGCTCGTCGTTCTCA+AGG | - | chr4.2:6004186-6004205 | MS.gene55718:intron | 45.0% |
| !! | CATTGGTTTGCGGAGTTTCA+TGG | + | chr4.2:6001565-6001584 | None:intergenic | 45.0% |
| !! | TCTCTTCACATGCTGGTTCA+AGG | - | chr4.2:6002064-6002083 | MS.gene55718:intron | 45.0% |
| !!! | CCTTGGCAAGATAGTTTTGG+TGG | + | chr4.2:6003901-6003920 | None:intergenic | 45.0% |
| !!! | TGGTTGCTTTTGGGGGTAAA+CGG | - | chr4.2:6000604-6000623 | MS.gene55718:intron | 45.0% |
| !!! | AAAAAAAATATACTTTTTTT+GGG | - | chr4.2:6003049-6003068 | MS.gene55718:CDS | 5.0% |
| !!! | TAAAAAAAATATACTTTTTT+TGG | - | chr4.2:6003048-6003067 | MS.gene55718:CDS | 5.0% |
| AAGAGACAGGTGAAGCCTCT+GGG | - | chr4.2:6001132-6001151 | MS.gene55718:intron | 50.0% | |
| AAGCTTCAGGATAGGATGGC+TGG | - | chr4.2:6002368-6002387 | MS.gene55718:CDS | 50.0% | |
| AGCGTCTGGGTCGTATTCTT+AGG | - | chr4.2:6002100-6002119 | MS.gene55718:intron | 50.0% | |
| AGCTTGCCTCCATCTGATGA+AGG | - | chr4.2:6003971-6003990 | MS.gene55718:intron | 50.0% | |
| AGGCTTCACCTGTCTCTTCT+TGG | + | chr4.2:6001130-6001149 | None:intergenic | 50.0% | |
| ATATGGCCGTGGTTGTGCTT+GGG | + | chr4.2:5999927-5999946 | None:intergenic | 50.0% | |
| ATGCTGTCTCTGTGGATCAG+TGG | - | chr4.2:6000466-6000485 | MS.gene55718:intron | 50.0% | |
| CAACAACTCCAGCGTTACCA+CGG | + | chr4.2:6000569-6000588 | None:intergenic | 50.0% | |
| CCTTCAGGTAGAGCAAGATC+CGG | - | chr4.2:6000351-6000370 | MS.gene55718:intron | 50.0% | |
| CGAGATCCTTCATCAGATGG+AGG | + | chr4.2:6003980-6003999 | None:intergenic | 50.0% | |
| CGGATCTTGCTCTACCTGAA+GGG | + | chr4.2:6000353-6000372 | None:intergenic | 50.0% | |
| CTCACTCCCTATTGCACTTG+TGG | - | chr4.2:6002654-6002673 | MS.gene55718:CDS | 50.0% | |
| CTCTTCTCTTGATATGGCCG+TGG | + | chr4.2:5999938-5999957 | None:intergenic | 50.0% | |
| CTGTCCAAGACCATGTTGTG+AGG | - | chr4.2:6003504-6003523 | MS.gene55718:CDS | 50.0% | |
| GACAGCAAAGAGAGATTCCG+TGG | - | chr4.2:6000549-6000568 | MS.gene55718:intron | 50.0% | |
| GCATGATAAACAGGTGCACG+TGG | - | chr4.2:6000774-6000793 | MS.gene55718:intron | 50.0% | |
| GCGGAGTTTCATGGCATACT+CGG | + | chr4.2:6001556-6001575 | None:intergenic | 50.0% | |
| GCGTCTGGGTCGTATTCTTA+GGG | - | chr4.2:6002101-6002120 | MS.gene55718:intron | 50.0% | |
| GGATCGATGAGTGCAATGTC+AGG | - | chr4.2:6004207-6004226 | MS.gene55718:CDS | 50.0% | |
| GGATCTTGCTCTACCTGAAG+GGG | + | chr4.2:6000352-6000371 | None:intergenic | 50.0% | |
| GGCAACAAATGCTGTCTCTG+TGG | - | chr4.2:6000458-6000477 | MS.gene55718:intron | 50.0% | |
| GGGAAAGCTTCAGGATAGGA+TGG | - | chr4.2:6002364-6002383 | MS.gene55718:CDS | 50.0% | |
| GGGTCGTATTCTTAGGGCAA+AGG | - | chr4.2:6002107-6002126 | MS.gene55718:intron | 50.0% | |
| TAAAGCCCCAAGCACAACCA+CGG | - | chr4.2:5999918-5999937 | MS.gene55718:intron | 50.0% | |
| TCAACTGGCACTACTCGGAA+AGG | - | chr4.2:6004024-6004043 | MS.gene55718:intron | 50.0% | |
| TCACTCAGCAGAAGAGGCTT+TGG | + | chr4.2:6000907-6000926 | None:intergenic | 50.0% | |
| TGATGCGGCAGAGAGAGAAA+GGG | - | chr4.2:6003570-6003589 | MS.gene55718:intron | 50.0% | |
| TGCAGCTACACTTGTGAGAG+AGG | - | chr4.2:6000942-6000961 | MS.gene55718:intron | 50.0% | |
| TGCTGTCTCTGTGGATCAGT+GGG | - | chr4.2:6000467-6000486 | MS.gene55718:intron | 50.0% | |
| ! | AATTACCACGAAAGGGCACG+TGG | - | chr4.2:6001489-6001508 | MS.gene55718:intron | 50.0% |
| ! | ATGGCTGGCAGCTTTTGCAA+GGG | - | chr4.2:5999983-6000002 | MS.gene55718:intron | 50.0% |
| ! | TATGGCTGGCAGCTTTTGCA+AGG | - | chr4.2:5999982-6000001 | MS.gene55718:intron | 50.0% |
| ! | TTGGTGTTTCAGCAGCTTCC+CGG | - | chr4.2:6000412-6000431 | MS.gene55718:intron | 50.0% |
| ! | TTTGCAAGGGCATGTGTCAC+TGG | - | chr4.2:5999996-6000015 | MS.gene55718:intron | 50.0% |
| !! | TATGGTGCTACAAGGTGCTG+TGG | - | chr4.2:6001588-6001607 | MS.gene55718:intron | 50.0% |
| CAAGAGAGCCCACTGGCAAA+AGG | + | chr4.2:6002316-6002335 | None:intergenic | 55.0% | |
| CACTGCAAACTTGGGCTCAC+AGG | - | chr4.2:6000841-6000860 | MS.gene55718:CDS | 55.0% | |
| CCGGATCTTGCTCTACCTGA+AGG | + | chr4.2:6000354-6000373 | None:intergenic | 55.0% | |
| CTGATGCGGCAGAGAGAGAA+AGG | - | chr4.2:6003569-6003588 | MS.gene55718:intron | 55.0% | |
| CTTCAGGATAGGATGGCTGG+TGG | - | chr4.2:6002371-6002390 | MS.gene55718:CDS | 55.0% | |
| GAAGAGACAGGTGAAGCCTC+TGG | - | chr4.2:6001131-6001150 | MS.gene55718:intron | 55.0% | |
| GAATCAGCAAGAGAGCCCAC+TGG | + | chr4.2:6002323-6002342 | None:intergenic | 55.0% | |
| GATATGGCCGTGGTTGTGCT+TGG | + | chr4.2:5999928-5999947 | None:intergenic | 55.0% | |
| GATGCGGCAGAGAGAGAAAG+GGG | - | chr4.2:6003571-6003590 | MS.gene55718:intron | 55.0% | |
| GGCAGGGAAAGCTTCAGGAT+AGG | - | chr4.2:6002360-6002379 | MS.gene55718:CDS | 55.0% | |
| TAGGATGGCTGGTGGCAAAG+AGG | - | chr4.2:6002379-6002398 | MS.gene55718:CDS | 55.0% | |
| TATCACCACGTGCCCTTTCG+TGG | + | chr4.2:6001497-6001516 | None:intergenic | 55.0% | |
| TATGGCCGTGGTTGTGCTTG+GGG | + | chr4.2:5999926-5999945 | None:intergenic | 55.0% | |
| TCTCTGTAGGAGCTCAGCTC+TGG | - | chr4.2:6003708-6003727 | MS.gene55718:intron | 55.0% | |
| ! | CGTCAAGAAGCACAGCGTCT+GGG | - | chr4.2:6002087-6002106 | MS.gene55718:intron | 55.0% |
| ! | GAGAGATTCCGTGGTAACGC+TGG | - | chr4.2:6000558-6000577 | MS.gene55718:intron | 55.0% |
| ! | GGGATTGCTGCTTATGGACG+AGG | - | chr4.2:6000674-6000693 | MS.gene55718:intron | 55.0% |
| ! | GGGGCTTTAGTTCCATCTCG+AGG | + | chr4.2:5999907-5999926 | None:intergenic | 55.0% |
| !! | CTGGGTATCGGTCGACACAA+GGG | + | chr4.2:6002426-6002445 | None:intergenic | 55.0% |
| AGGGACTTTCCGGCACCACA+AGG | + | chr4.2:6000390-6000409 | None:intergenic | 60.0% | |
| ATCGGGACCACAGTTCGAGC+AGG | + | chr4.2:6003847-6003866 | None:intergenic | 60.0% | |
| CGAGGTCTGGGTTCACCTGT+AGG | + | chr4.2:5999889-5999908 | None:intergenic | 60.0% | |
| GGTGAACCCAGACCTCGAGA+TGG | - | chr4.2:5999892-5999911 | MS.gene55718:intron | 60.0% | |
| ! | AGACTGAGGGAGTGTGGGAG+GGG | - | chr4.2:6003636-6003655 | MS.gene55718:intron | 60.0% |
| ! | CCTTGTGTCGACCGATACCC+AGG | - | chr4.2:6002424-6002443 | MS.gene55718:CDS | 60.0% |
| ! | GAGACTGAGGGAGTGTGGGA+GGG | - | chr4.2:6003635-6003654 | MS.gene55718:intron | 60.0% |
| ! | GCGTCAAGAAGCACAGCGTC+TGG | - | chr4.2:6002086-6002105 | MS.gene55718:intron | 60.0% |
| ! | GGTGCCGGAAAGTCCCTAGT+TGG | - | chr4.2:6000393-6000412 | MS.gene55718:intron | 60.0% |
| ! | TGAGACTGAGGGAGTGTGGG+AGG | - | chr4.2:6003634-6003653 | MS.gene55718:intron | 60.0% |
| !! | CCTGGGTATCGGTCGACACA+AGG | + | chr4.2:6002427-6002446 | None:intergenic | 60.0% |
| !! | GAGTGTGGGAGGGGGTATCT+TGG | - | chr4.2:6003645-6003664 | MS.gene55718:intron | 60.0% |
| ! | GACTGAGGGAGTGTGGGAGG+GGG | - | chr4.2:6003637-6003656 | MS.gene55718:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 5999180 | 6004284 | 5999180 | ID=MS.gene55718 |
| chr4.2 | mRNA | 5999180 | 6004284 | 5999180 | ID=MS.gene55718.t1;Parent=MS.gene55718 |
| chr4.2 | exon | 6004204 | 6004284 | 6004204 | ID=MS.gene55718.t1.exon1;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 6004204 | 6004284 | 6004204 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| chr4.2 | exon | 6003484 | 6003571 | 6003484 | ID=MS.gene55718.t1.exon2;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 6003484 | 6003571 | 6003484 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| chr4.2 | exon | 6002769 | 6003106 | 6002769 | ID=MS.gene55718.t1.exon3;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 6002769 | 6003106 | 6002769 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| chr4.2 | exon | 6002602 | 6002677 | 6002602 | ID=MS.gene55718.t1.exon4;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 6002602 | 6002677 | 6002602 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| chr4.2 | exon | 6002324 | 6002517 | 6002324 | ID=MS.gene55718.t1.exon5;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 6002324 | 6002517 | 6002324 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| chr4.2 | exon | 6001863 | 6002026 | 6001863 | ID=MS.gene55718.t1.exon6;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 6001863 | 6002026 | 6001863 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| chr4.2 | exon | 6001702 | 6001774 | 6001702 | ID=MS.gene55718.t1.exon7;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 6001702 | 6001774 | 6001702 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| chr4.2 | exon | 6001336 | 6001449 | 6001336 | ID=MS.gene55718.t1.exon8;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 6001336 | 6001449 | 6001336 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| chr4.2 | exon | 6001019 | 6001099 | 6001019 | ID=MS.gene55718.t1.exon9;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 6001019 | 6001099 | 6001019 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| chr4.2 | exon | 6000832 | 6000891 | 6000832 | ID=MS.gene55718.t1.exon10;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 6000832 | 6000891 | 6000832 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| chr4.2 | exon | 5999419 | 5999502 | 5999419 | ID=MS.gene55718.t1.exon11;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 5999419 | 5999502 | 5999419 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| chr4.2 | exon | 5999180 | 5999347 | 5999180 | ID=MS.gene55718.t1.exon12;Parent=MS.gene55718.t1 |
| chr4.2 | CDS | 5999180 | 5999347 | 5999180 | ID=cds.MS.gene55718.t1;Parent=MS.gene55718.t1 |
| Gene Sequence |
| Protein sequence |
