Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06698.t1 | XP_003602264.1 | 97.2 | 798 | 21 | 1 | 1 | 798 | 1 | 797 | 0.00E+00 | 1364 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06698.t1 | G7J7F4 | 97.2 | 798 | 21 | 1 | 1 | 798 | 1 | 797 | 0.0e+00 | 1364.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene06698 | 0.826369 | 2.82E-54 | -1.69E-46 |
| MS.gene049254 | MS.gene06698 | 0.832787 | 7.75E-56 | -1.69E-46 |
| MS.gene049272 | MS.gene06698 | 0.819183 | 1.33E-52 | -1.69E-46 |
| MS.gene049378 | MS.gene06698 | 0.81032 | 1.22E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene06698 | 0.810121 | 1.35E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene06698 | 0.834115 | 3.61E-56 | -1.69E-46 |
| MS.gene049452 | MS.gene06698 | 0.830754 | 2.46E-55 | -1.69E-46 |
| MS.gene049501 | MS.gene06698 | 0.800625 | 1.32E-48 | -1.69E-46 |
| MS.gene049669 | MS.gene06698 | 0.821448 | 4.02E-53 | -1.69E-46 |
| MS.gene049958 | MS.gene06698 | 0.803747 | 3.01E-49 | -1.69E-46 |
| MS.gene050026 | MS.gene06698 | 0.836855 | 7.33E-57 | -1.69E-46 |
| MS.gene050029 | MS.gene06698 | 0.800419 | 1.45E-48 | -1.69E-46 |
| MS.gene050228 | MS.gene06698 | 0.801263 | 9.78E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene06698 | 0.867124 | 1.72E-65 | -1.69E-46 |
| MS.gene050750 | MS.gene06698 | 0.852869 | 3.48E-61 | -1.69E-46 |
| MS.gene050759 | MS.gene06698 | 0.847976 | 8.22E-60 | -1.69E-46 |
| MS.gene050787 | MS.gene06698 | 0.803576 | 3.26E-49 | -1.69E-46 |
| MS.gene050820 | MS.gene06698 | 0.801305 | 9.58E-49 | -1.69E-46 |
| MS.gene050826 | MS.gene06698 | 0.803252 | 3.81E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene06698 | 0.849601 | 2.91E-60 | -1.69E-46 |
| MS.gene050962 | MS.gene06698 | 0.836053 | 1.17E-56 | -1.69E-46 |
| MS.gene051147 | MS.gene06698 | 0.80955 | 1.79E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene06698 | 0.816898 | 4.36E-52 | -1.69E-46 |
| MS.gene051279 | MS.gene06698 | 0.80344 | 3.48E-49 | -1.69E-46 |
| MS.gene051368 | MS.gene06698 | 0.824357 | 8.44E-54 | -1.69E-46 |
| MS.gene051800 | MS.gene06698 | 0.824238 | 9.00E-54 | -1.69E-46 |
| MS.gene051924 | MS.gene06698 | -0.837141 | 6.19E-57 | -1.69E-46 |
| MS.gene051926 | MS.gene06698 | -0.823205 | 1.57E-53 | -1.69E-46 |
| MS.gene052042 | MS.gene06698 | 0.826701 | 2.35E-54 | -1.69E-46 |
| MS.gene052190 | MS.gene06698 | 0.858996 | 5.61E-63 | -1.69E-46 |
| MS.gene052333 | MS.gene06698 | 0.87001 | 2.02E-66 | -1.69E-46 |
| MS.gene052464 | MS.gene06698 | 0.816279 | 6.00E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene06698 | 0.837795 | 4.21E-57 | -1.69E-46 |
| MS.gene052582 | MS.gene06698 | 0.819815 | 9.53E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene06698 | 0.801177 | 1.02E-48 | -1.69E-46 |
| MS.gene052586 | MS.gene06698 | 0.824994 | 5.97E-54 | -1.69E-46 |
| MS.gene052674 | MS.gene06698 | 0.834273 | 3.30E-56 | -1.69E-46 |
| MS.gene052675 | MS.gene06698 | 0.838486 | 2.80E-57 | -1.69E-46 |
| MS.gene052677 | MS.gene06698 | 0.840147 | 1.04E-57 | -1.69E-46 |
| MS.gene052863 | MS.gene06698 | 0.815219 | 1.03E-51 | -1.69E-46 |
| MS.gene052867 | MS.gene06698 | 0.815641 | 8.33E-52 | -1.69E-46 |
| MS.gene052965 | MS.gene06698 | -0.802275 | 6.06E-49 | -1.69E-46 |
| MS.gene053006 | MS.gene06698 | 0.812498 | 4.11E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene06698 | 0.856583 | 2.92E-62 | -1.69E-46 |
| MS.gene053201 | MS.gene06698 | 0.820691 | 6.00E-53 | -1.69E-46 |
| MS.gene053584 | MS.gene06698 | 0.800619 | 1.32E-48 | -1.69E-46 |
| MS.gene053621 | MS.gene06698 | 0.805864 | 1.09E-49 | -1.69E-46 |
| MS.gene054093 | MS.gene06698 | 0.800868 | 1.18E-48 | -1.69E-46 |
| MS.gene05414 | MS.gene06698 | 0.821909 | 3.14E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene06698 | 0.824742 | 6.84E-54 | -1.69E-46 |
| MS.gene054236 | MS.gene06698 | 0.830264 | 3.24E-55 | -1.69E-46 |
| MS.gene054291 | MS.gene06698 | -0.860215 | 2.41E-63 | -1.69E-46 |
| MS.gene054405 | MS.gene06698 | 0.847438 | 1.16E-59 | -1.69E-46 |
| MS.gene054467 | MS.gene06698 | 0.860252 | 2.35E-63 | -1.69E-46 |
| MS.gene054468 | MS.gene06698 | 0.871468 | 6.68E-67 | -1.69E-46 |
| MS.gene054479 | MS.gene06698 | 0.823185 | 1.59E-53 | -1.69E-46 |
| MS.gene054559 | MS.gene06698 | 0.842828 | 2.04E-58 | -1.69E-46 |
| MS.gene054610 | MS.gene06698 | 0.806588 | 7.65E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene06698 | 0.841112 | 5.79E-58 | -1.69E-46 |
| MS.gene054775 | MS.gene06698 | 0.805767 | 1.14E-49 | -1.69E-46 |
| MS.gene055227 | MS.gene06698 | 0.821061 | 4.93E-53 | -1.69E-46 |
| MS.gene055228 | MS.gene06698 | 0.81833 | 2.07E-52 | -1.69E-46 |
| MS.gene055356 | MS.gene06698 | 0.827513 | 1.50E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene06698 | 0.842381 | 2.68E-58 | -1.69E-46 |
| MS.gene055778 | MS.gene06698 | 0.820113 | 8.14E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene06698 | 0.860963 | 1.43E-63 | -1.69E-46 |
| MS.gene055875 | MS.gene06698 | 0.804197 | 2.42E-49 | -1.69E-46 |
| MS.gene055926 | MS.gene06698 | 0.826216 | 3.06E-54 | -1.69E-46 |
| MS.gene05595 | MS.gene06698 | 0.801964 | 7.02E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene06698 | 0.800535 | 1.38E-48 | -1.69E-46 |
| MS.gene056162 | MS.gene06698 | 0.810077 | 1.38E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene06698 | 0.809651 | 1.70E-50 | -1.69E-46 |
| MS.gene056174 | MS.gene06698 | 0.854511 | 1.17E-61 | -1.69E-46 |
| MS.gene056252 | MS.gene06698 | 0.801173 | 1.02E-48 | -1.69E-46 |
| MS.gene056480 | MS.gene06698 | 0.822893 | 1.86E-53 | -1.69E-46 |
| MS.gene056498 | MS.gene06698 | 0.806976 | 6.33E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene06698 | 0.851575 | 8.12E-61 | -1.69E-46 |
| MS.gene056779 | MS.gene06698 | 0.8165 | 5.35E-52 | -1.69E-46 |
| MS.gene056873 | MS.gene06698 | 0.825823 | 3.80E-54 | -1.69E-46 |
| MS.gene057026 | MS.gene06698 | 0.812265 | 4.63E-51 | -1.69E-46 |
| MS.gene057156 | MS.gene06698 | -0.827982 | 1.16E-54 | -1.69E-46 |
| MS.gene057194 | MS.gene06698 | 0.808406 | 3.15E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene06698 | 0.80273 | 4.88E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene06698 | 0.816676 | 4.89E-52 | -1.69E-46 |
| MS.gene05761 | MS.gene06698 | 0.838932 | 2.14E-57 | -1.69E-46 |
| MS.gene057869 | MS.gene06698 | 0.826261 | 2.99E-54 | -1.69E-46 |
| MS.gene058010 | MS.gene06698 | 0.81521 | 1.04E-51 | -1.69E-46 |
| MS.gene058037 | MS.gene06698 | 0.807079 | 6.02E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene06698 | 0.814532 | 1.47E-51 | -1.69E-46 |
| MS.gene058548 | MS.gene06698 | 0.814295 | 1.66E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene06698 | 0.821091 | 4.85E-53 | -1.69E-46 |
| MS.gene058979 | MS.gene06698 | 0.831654 | 1.48E-55 | -1.69E-46 |
| MS.gene059128 | MS.gene06698 | 0.806935 | 6.46E-50 | -1.69E-46 |
| MS.gene059161 | MS.gene06698 | 0.80623 | 9.10E-50 | -1.69E-46 |
| MS.gene059272 | MS.gene06698 | 0.812916 | 3.33E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene06698 | 0.816744 | 4.72E-52 | -1.69E-46 |
| MS.gene059306 | MS.gene06698 | 0.800791 | 1.22E-48 | -1.69E-46 |
| MS.gene059550 | MS.gene06698 | 0.805624 | 1.22E-49 | -1.69E-46 |
| MS.gene059584 | MS.gene06698 | 0.820553 | 6.46E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene06698 | 0.872708 | 2.58E-67 | -1.69E-46 |
| MS.gene060137 | MS.gene06698 | -0.824278 | 8.80E-54 | -1.69E-46 |
| MS.gene060167 | MS.gene06698 | 0.846717 | 1.82E-59 | -1.69E-46 |
| MS.gene060310 | MS.gene06698 | 0.800092 | 1.69E-48 | -1.69E-46 |
| MS.gene060322 | MS.gene06698 | 0.878931 | 1.88E-69 | -1.69E-46 |
| MS.gene060373 | MS.gene06698 | 0.810113 | 1.35E-50 | -1.69E-46 |
| MS.gene060521 | MS.gene06698 | 0.805486 | 1.30E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene06698 | 0.890516 | 9.18E-74 | -1.69E-46 |
| MS.gene060634 | MS.gene06698 | -0.801952 | 7.06E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene06698 | 0.853297 | 2.62E-61 | -1.69E-46 |
| MS.gene060685 | MS.gene06698 | 0.854417 | 1.25E-61 | -1.69E-46 |
| MS.gene060802 | MS.gene06698 | 0.821531 | 3.84E-53 | -1.69E-46 |
| MS.gene060803 | MS.gene06698 | 0.807266 | 5.50E-50 | -1.69E-46 |
| MS.gene060918 | MS.gene06698 | 0.800292 | 1.54E-48 | -1.69E-46 |
| MS.gene060919 | MS.gene06698 | 0.811934 | 5.46E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene06698 | 0.808028 | 3.79E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene06698 | -0.833873 | 4.15E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06698.t1 | MTR_3g091650 | 97.619 | 798 | 18 | 1 | 1 | 798 | 1 | 797 | 0.0 | 1588 |
| MS.gene06698.t1 | MTR_3g091650 | 97.080 | 685 | 19 | 1 | 1 | 685 | 1 | 684 | 0.0 | 1355 |
| MS.gene06698.t1 | MTR_5g007360 | 63.158 | 76 | 14 | 2 | 832 | 907 | 152 | 213 | 8.26e-18 | 85.9 |
| MS.gene06698.t1 | MTR_5g026680 | 36.250 | 160 | 92 | 3 | 650 | 809 | 240 | 389 | 1.87e-17 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06698.t1 | AT5G53020 | 42.972 | 747 | 367 | 14 | 60 | 798 | 17 | 712 | 4.10e-150 | 460 |
| MS.gene06698.t1 | AT5G53020 | 42.972 | 747 | 367 | 14 | 60 | 798 | 17 | 712 | 4.10e-150 | 460 |
| MS.gene06698.t1 | AT5G53020 | 42.972 | 747 | 367 | 14 | 60 | 798 | 17 | 712 | 4.10e-150 | 460 |
| MS.gene06698.t1 | AT5G53020 | 42.972 | 747 | 367 | 14 | 60 | 798 | 17 | 712 | 4.10e-150 | 460 |
| MS.gene06698.t1 | AT5G53020 | 42.972 | 747 | 367 | 14 | 60 | 798 | 17 | 712 | 4.10e-150 | 460 |
| MS.gene06698.t1 | AT5G53020 | 42.972 | 747 | 367 | 14 | 60 | 798 | 17 | 712 | 4.10e-150 | 460 |
| MS.gene06698.t1 | AT5G53020 | 42.972 | 747 | 367 | 14 | 60 | 798 | 17 | 712 | 4.10e-150 | 460 |
| MS.gene06698.t1 | AT5G53020 | 42.570 | 747 | 371 | 13 | 60 | 798 | 17 | 713 | 5.02e-150 | 460 |
| MS.gene06698.t1 | AT5G53020 | 42.570 | 747 | 371 | 13 | 60 | 798 | 17 | 713 | 5.02e-150 | 460 |
| MS.gene06698.t1 | AT5G53020 | 43.484 | 729 | 353 | 14 | 78 | 798 | 26 | 703 | 5.91e-149 | 457 |
| MS.gene06698.t1 | AT3G45900 | 35.065 | 231 | 119 | 7 | 566 | 792 | 170 | 373 | 2.26e-19 | 92.0 |
Find 143 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCAATCAAAGATTGTTTC+TGG | 0.151138 | 3.3:+76416772 | MS.gene06698:CDS |
| TACATAAGTCTTCATTTCTT+TGG | 0.174512 | 3.3:-76414928 | None:intergenic |
| TCAAGGAAGTGCACAGCTTT+TGG | 0.210804 | 3.3:+76413974 | MS.gene06698:CDS |
| AGAATGTATCCAATATATTT+TGG | 0.237612 | 3.3:+76413861 | MS.gene06698:CDS |
| CTTAGCACAGCTCCAATATA+TGG | 0.238263 | 3.3:+76419704 | MS.gene06698:CDS |
| CTAAACCTCTTTGAACTTCA+TGG | 0.240686 | 3.3:-76416876 | None:intergenic |
| ATCTTGTTCTCCTTACTAAA+AGG | 0.244750 | 3.3:+76418372 | MS.gene06698:CDS |
| ACATAAGTCTTCATTTCTTT+GGG | 0.249165 | 3.3:-76414927 | None:intergenic |
| ATGAGAAGTTAGAGGCATTT+AGG | 0.253487 | 3.3:+76415465 | MS.gene06698:CDS |
| GTTCAAAAGGAAGTGATAAA+TGG | 0.266617 | 3.3:+76414014 | MS.gene06698:CDS |
| GCATCAATTTCTCTGTGATT+TGG | 0.278601 | 3.3:-76415944 | None:intergenic |
| TGCGAAGTTTCACAAGGATT+TGG | 0.302648 | 3.3:+76414592 | MS.gene06698:CDS |
| TGTGATGCCTTTGTTCAATC+AGG | 0.310529 | 3.3:-76415403 | None:intergenic |
| AACTAACCTATCCCATATAT+TGG | 0.313425 | 3.3:-76419716 | None:intergenic |
| CTCAAGGTCACCTATAATTC+TGG | 0.315128 | 3.3:-76416911 | None:intergenic |
| GAGACATGACAAGATGAAAT+TGG | 0.321303 | 3.3:+76415568 | MS.gene06698:CDS |
| GTTCGGACAGCCAGAATTAT+AGG | 0.330038 | 3.3:+76416901 | MS.gene06698:CDS |
| ACGCTAAACGTTTGGAAGAT+TGG | 0.330070 | 3.3:+76415351 | MS.gene06698:CDS |
| TTCAAAAGGAAGTGATAAAT+GGG | 0.332640 | 3.3:+76414015 | MS.gene06698:CDS |
| CGGTCGCGCTGTTAAGCATT+TGG | 0.334683 | 3.3:+76414487 | MS.gene06698:CDS |
| CAAGAAACACCAAAATATAT+TGG | 0.335840 | 3.3:-76413870 | None:intergenic |
| AAGAACATTCTTCTGATCTA+AGG | 0.336986 | 3.3:+76414405 | MS.gene06698:CDS |
| CGCTAAACGTTTGGAAGATT+GGG | 0.338729 | 3.3:+76415352 | MS.gene06698:CDS |
| ACTTTGCTGAATAAACAAAT+TGG | 0.339160 | 3.3:+76416184 | MS.gene06698:CDS |
| TCCTGCTAACGCTAAACGTT+TGG | 0.349941 | 3.3:+76415343 | MS.gene06698:CDS |
| TTCAAAGAGGTTTAGAAGTT+CGG | 0.354728 | 3.3:+76416884 | MS.gene06698:CDS |
| CAAAGAGGAGTCTGATTTGA+TGG | 0.372221 | 3.3:+76414547 | MS.gene06698:CDS |
| ACCAATTTGCTTCAAAATTG+AGG | 0.378661 | 3.3:+76415636 | MS.gene06698:CDS |
| GAAGGAAATGGAGGGTTTGA+TGG | 0.379626 | 3.3:+76414265 | MS.gene06698:CDS |
| GAGAAAGGAGCTAGAAGAAA+AGG | 0.388393 | 3.3:+76414325 | MS.gene06698:CDS |
| GCACCAATTGTTCACGGGTA+AGG | 0.391578 | 3.3:-76419538 | None:intergenic |
| TACCCTTACCCGTGAACAAT+TGG | 0.395683 | 3.3:+76419535 | MS.gene06698:CDS |
| GAAATTGGAGAGCTTATTGT+TGG | 0.396045 | 3.3:+76415583 | MS.gene06698:CDS |
| TTAAGTTATCAAAGGCTAGA+AGG | 0.396326 | 3.3:+76414696 | MS.gene06698:CDS |
| ATTGTTGAAACTATGCTTCA+AGG | 0.396530 | 3.3:+76413957 | MS.gene06698:CDS |
| ATTAGTGAAGATAGCAAAGT+TGG | 0.402279 | 3.3:+76416136 | MS.gene06698:CDS |
| AAAGCAAATGAGAAAGTTGT+AGG | 0.405460 | 3.3:+76414107 | MS.gene06698:CDS |
| GAGCTTATTGTTGGAGAGAG+AGG | 0.407957 | 3.3:+76415592 | MS.gene06698:CDS |
| CAAAGATATATTGTTGCAAC+AGG | 0.409586 | 3.3:+76416733 | MS.gene06698:CDS |
| TTTATTCAGCAAAGTAATCA+AGG | 0.412723 | 3.3:-76416176 | None:intergenic |
| AAGATTGTTTCTGGATTTGT+TGG | 0.423223 | 3.3:+76416781 | MS.gene06698:CDS |
| AAAGCAAATGTTGTTGAAAG+AGG | 0.431548 | 3.3:+76414673 | MS.gene06698:CDS |
| TCCAAACGTTTAGCGTTAGC+AGG | 0.436724 | 3.3:-76415344 | None:intergenic |
| GGCAAGTAGTGATCAGAAAT+AGG | 0.438128 | 3.3:-76414905 | None:intergenic |
| GATGGTTCAGAAATTAACTT+TGG | 0.439228 | 3.3:+76414565 | MS.gene06698:CDS |
| TAAAGAGTGCACTTCTTAGC+TGG | 0.440342 | 3.3:+76419636 | MS.gene06698:CDS |
| TCAGTCACACTTGGAGGGAT+TGG | 0.440819 | 3.3:+76415526 | MS.gene06698:CDS |
| TGTTGGAGTGGCAGAAGAGA+TGG | 0.441207 | 3.3:+76416798 | MS.gene06698:CDS |
| CAAAACTGCTTTCATTGAGC+TGG | 0.443907 | 3.3:+76414433 | MS.gene06698:CDS |
| ATTGATGCTGCTGAAAAGAT+AGG | 0.447135 | 3.3:+76415959 | MS.gene06698:CDS |
| GAATCAGAAATTGAAGGAAA+TGG | 0.447469 | 3.3:+76414253 | MS.gene06698:CDS |
| TTGTTTCTAAAGCAGTTTGA+AGG | 0.452487 | 3.3:-76415659 | None:intergenic |
| AAAGAGGTTGCTCTCTAGTT+GGG | 0.453648 | 3.3:+76419613 | MS.gene06698:CDS |
| TGCTGCATGCCTCTTGAACT+AGG | 0.454052 | 3.3:-76414830 | None:intergenic |
| AGATAAGAAGATTGAAGAAG+AGG | 0.454313 | 3.3:+76414295 | MS.gene06698:CDS |
| AAAAGAGGTTGCTCTCTAGT+TGG | 0.458121 | 3.3:+76419612 | MS.gene06698:CDS |
| ATGCAGCATAGTTCTTCAAC+AGG | 0.464889 | 3.3:+76414845 | MS.gene06698:CDS |
| GTCAAATTGATCATGATTCA+AGG | 0.469034 | 3.3:-76415825 | None:intergenic |
| ATTCTAATTGAAAGGTTGAC+AGG | 0.470453 | 3.3:+76416085 | MS.gene06698:CDS |
| CACCAATTGTTCACGGGTAA+GGG | 0.472652 | 3.3:-76419537 | None:intergenic |
| GGTTGCATACCTTTCTGTCT+CGG | 0.474593 | 3.3:-76415381 | None:intergenic |
| GATCAAAGATGAGAAGTTAG+AGG | 0.475117 | 3.3:+76415457 | MS.gene06698:CDS |
| AATGATGGAAACTTTGATTG+AGG | 0.477833 | 3.3:+76415778 | MS.gene06698:CDS |
| GATTGAGGAAGTTTGTGAAA+AGG | 0.480885 | 3.3:+76415793 | MS.gene06698:CDS |
| TGGAAAATCACCAGCAGGAA+TGG | 0.484754 | 3.3:-76419501 | None:intergenic |
| AGTAAGGAGAACAAGATCAA+TGG | 0.488423 | 3.3:-76418366 | None:intergenic |
| ATTCTCCGCGATTTGCATAG+AGG | 0.490412 | 3.3:-76416642 | None:intergenic |
| AAGAAGAAAAGCATGTTTGT+CGG | 0.491398 | 3.3:+76415888 | MS.gene06698:CDS |
| AGCAACTAATTCTAATTGAA+AGG | 0.495011 | 3.3:+76416077 | MS.gene06698:CDS |
| ACGTTTAGCGTTAGCAGGAA+TGG | 0.496115 | 3.3:-76415339 | None:intergenic |
| AAATTACTCAAGATCCTGTC+TGG | 0.496376 | 3.3:+76415708 | MS.gene06698:CDS |
| TTAGCACAGCTCCAATATAT+GGG | 0.498327 | 3.3:+76419705 | MS.gene06698:CDS |
| AGAGGAACTTATTTCTGTCA+TGG | 0.499376 | 3.3:+76414520 | MS.gene06698:CDS |
| GATTGTGTGGAAAGTTCAAA+AGG | 0.499495 | 3.3:+76414001 | MS.gene06698:CDS |
| GCATTTGGATGCCACAAAAG+AGG | 0.503274 | 3.3:+76414502 | MS.gene06698:CDS |
| GCAGCTTCAGTCACACTTGG+AGG | 0.505207 | 3.3:+76415520 | MS.gene06698:CDS |
| TTGCTGCACAAGAACAAAGC+TGG | 0.505614 | 3.3:+76414135 | MS.gene06698:CDS |
| AGAAGAAAAGCATGTTTGTC+GGG | 0.506234 | 3.3:+76415889 | MS.gene06698:CDS |
| AAAGCTGAAAAGTGCTGAGA+TGG | 0.516211 | 3.3:+76414046 | MS.gene06698:CDS |
| TCAGAAATTGAAGGAAATGG+AGG | 0.519896 | 3.3:+76414256 | MS.gene06698:CDS |
| TCAGTTGCACCAATTGTTCA+CGG | 0.521759 | 3.3:-76419544 | None:intergenic |
| CTTTGATACTGCACAGGAGT+AGG | 0.526778 | 3.3:-76415920 | None:intergenic |
| AAGATGGATCTTCATGCGCT+TGG | 0.528734 | 3.3:+76416025 | MS.gene06698:CDS |
| GTTGAACTTGAGTTCGAGAA+AGG | 0.533019 | 3.3:+76414799 | MS.gene06698:CDS |
| GAAGAGATGGAGAAAAGTGC+TGG | 0.533742 | 3.3:+76416811 | MS.gene06698:CDS |
| TGAATTGAATCAGAAATTGA+AGG | 0.534394 | 3.3:+76414247 | MS.gene06698:CDS |
| GCTGCATGCCTCTTGAACTA+GGG | 0.535208 | 3.3:-76414829 | None:intergenic |
| CAGTTGCACCAATTGTTCAC+GGG | 0.536510 | 3.3:-76419543 | None:intergenic |
| CTGAGCATGAAACAGAAAAG+TGG | 0.536779 | 3.3:+76414726 | MS.gene06698:CDS |
| ATTTGCAGTACCATTCCTGC+TGG | 0.540904 | 3.3:+76419491 | MS.gene06698:intron |
| GTGATGCCTTTGTTCAATCA+GGG | 0.543688 | 3.3:-76415402 | None:intergenic |
| GAAAGAGGTTAAGTTATCAA+AGG | 0.545103 | 3.3:+76414688 | MS.gene06698:CDS |
| TGCACTTCTTAGCTGGAAGA+AGG | 0.549066 | 3.3:+76419643 | MS.gene06698:CDS |
| AAAACAATTCCAGTGGAAGA+TGG | 0.549249 | 3.3:+76416009 | MS.gene06698:CDS |
| AGGAAACTTCGACAACAGAT+TGG | 0.551051 | 3.3:+76414170 | MS.gene06698:CDS |
| CAATTGGTGCAACTGAAGCT+AGG | 0.551121 | 3.3:+76419551 | MS.gene06698:CDS |
| AAAGCTGGTTTAGTGAAAGA+AGG | 0.555578 | 3.3:+76414150 | MS.gene06698:CDS |
| CATAAGTCTTCATTTCTTTG+GGG | 0.561196 | 3.3:-76414926 | None:intergenic |
| GGAAATGGAGGGTTTGATGG+AGG | 0.563034 | 3.3:+76414268 | MS.gene06698:CDS |
| ACAAAGGCATCACATAGAGT+TGG | 0.563720 | 3.3:+76415412 | MS.gene06698:CDS |
| CATATATTGGAGCTGTGCTA+AGG | 0.567562 | 3.3:-76419703 | None:intergenic |
| GGGTGAGAGCCGAGACAGAA+AGG | 0.567887 | 3.3:+76415372 | MS.gene06698:CDS |
| CAGAAATTGAAGGAAATGGA+GGG | 0.572990 | 3.3:+76414257 | MS.gene06698:CDS |
| CATTCGTTTGCAAAGATCGT+CGG | 0.573921 | 3.3:-76416233 | None:intergenic |
| CAGCTTCAGTCACACTTGGA+GGG | 0.574526 | 3.3:+76415521 | MS.gene06698:CDS |
| CATGAAGATCCATCTTCCAC+TGG | 0.574920 | 3.3:-76416018 | None:intergenic |
| ACAGCTCCAATATATGGGAT+AGG | 0.575735 | 3.3:+76419710 | MS.gene06698:CDS |
| TCAAATTGATCATGATTCAA+GGG | 0.575779 | 3.3:-76415824 | None:intergenic |
| AGACATCTTGAAGCTGAACT+CGG | 0.580639 | 3.3:+76414467 | MS.gene06698:CDS |
| AGAACAAGATCAATGGTTTG+TGG | 0.580661 | 3.3:-76418359 | None:intergenic |
| TTTGGACTTTGATACTGCAC+AGG | 0.581379 | 3.3:-76415926 | None:intergenic |
| AAGGAATGATATGTTTGAGA+AGG | 0.585836 | 3.3:+76416950 | MS.gene06698:CDS |
| TCAGATGGAAAATCACCAGC+AGG | 0.586827 | 3.3:-76419506 | None:intergenic |
| TTCTGTCATGGAGAACAAAG+AGG | 0.590110 | 3.3:+76414532 | MS.gene06698:CDS |
| AAGTGGAGAGAAGCTTCAGA+AGG | 0.592869 | 3.3:+76414743 | MS.gene06698:CDS |
| AGAGAATCTGCTAAACGTGA+AGG | 0.597592 | 3.3:+76414380 | MS.gene06698:CDS |
| AAGCAAATGAGAAAGTTGTA+GGG | 0.600001 | 3.3:+76414108 | MS.gene06698:CDS |
| CTATTCCATGAAGTTCAAAG+AGG | 0.600346 | 3.3:+76416871 | MS.gene06698:CDS |
| AGGTGACCTTGAGGGAACAT+TGG | 0.600537 | 3.3:+76416921 | MS.gene06698:CDS |
| AAAGCAGCTTCAGTCACACT+TGG | 0.601610 | 3.3:+76415517 | MS.gene06698:CDS |
| GAGTATCTTACAAGATCAAG+AGG | 0.601910 | 3.3:+76416047 | MS.gene06698:CDS |
| GAGGGAACATTGGCTCGTGA+AGG | 0.602293 | 3.3:+76416931 | MS.gene06698:CDS |
| CAGAATTATAGGTGACCTTG+AGG | 0.607753 | 3.3:+76416912 | MS.gene06698:CDS |
| ACACTTGGAGGGATTGGTGA+AGG | 0.608312 | 3.3:+76415532 | MS.gene06698:CDS |
| TGTTTCTGGATTTGTTGGAG+TGG | 0.609479 | 3.3:+76416786 | MS.gene06698:CDS |
| CACGAGCCAATGTTCCCTCA+AGG | 0.611253 | 3.3:-76416927 | None:intergenic |
| AAGATTGTGAAGAGAAAACC+AGG | 0.612078 | 3.3:+76415740 | MS.gene06698:CDS |
| CGACGATCTTTGCAAACGAA+TGG | 0.616168 | 3.3:+76416234 | MS.gene06698:CDS |
| ATGATGCAAAACAATTCCAG+TGG | 0.616654 | 3.3:+76416002 | MS.gene06698:CDS |
| GGAGATTGCGAAGTTTCACA+AGG | 0.622468 | 3.3:+76414586 | MS.gene06698:CDS |
| TTGTTCATTTGAAATATGTG+AGG | 0.625497 | 3.3:-76414870 | None:intergenic |
| GTAAGGGTAACAACTTCAGA+TGG | 0.625627 | 3.3:-76419521 | None:intergenic |
| TGAGGAAGTTTGTGAAAAGG+AGG | 0.626585 | 3.3:+76415796 | MS.gene06698:CDS |
| AGAAGTTAGAGGCATTTAGG+TGG | 0.627308 | 3.3:+76415468 | MS.gene06698:CDS |
| ATCTTGACTCTAGACCAGAC+AGG | 0.627708 | 3.3:-76415722 | None:intergenic |
| TCAAAAGGAAGTGATAAATG+GGG | 0.629196 | 3.3:+76414016 | MS.gene06698:CDS |
| TGAGTAATTTCTGAAGATTG+CGG | 0.630512 | 3.3:-76415695 | None:intergenic |
| AGAATTATAGGTGACCTTGA+GGG | 0.630636 | 3.3:+76416913 | MS.gene06698:CDS |
| CAAAAGGAAGTGATAAATGG+GGG | 0.635891 | 3.3:+76414017 | MS.gene06698:CDS |
| AGAAAAGCATGTTTGTCGGG+AGG | 0.653415 | 3.3:+76415892 | MS.gene06698:CDS |
| ATGCAACCCTGATTGAACAA+AGG | 0.672033 | 3.3:+76415396 | MS.gene06698:CDS |
| AATGTCCTCTATGCAAATCG+CGG | 0.688926 | 3.3:+76416637 | MS.gene06698:CDS |
| GGTGAAGAAGAATCAGCATG+AGG | 0.709031 | 3.3:-76418338 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATAATATTAATTCAAAT+TGG | + | chr3.3:76415087-76415106 | MS.gene06698:intron | 10.0% |
| !! | TAAAGGAAAAAAAAAAAAAA+TGG | - | chr3.3:76418579-76418598 | None:intergenic | 10.0% |
| !!! | AAATATAAACTATTTTAGAT+TGG | + | chr3.3:76417344-76417363 | MS.gene06698:intron | 10.0% |
| !! | TAATAACATCAATTTGTATA+TGG | + | chr3.3:76417076-76417095 | MS.gene06698:intron | 15.0% |
| !! | TCAAAAACAAAATAAAAAAG+AGG | + | chr3.3:76419597-76419616 | MS.gene06698:CDS | 15.0% |
| !! | TCATTTATGATATTGAAAAA+TGG | + | chr3.3:76416506-76416525 | MS.gene06698:intron | 15.0% |
| !!! | AATAAAAATACCTTTTAGTA+AGG | - | chr3.3:76418385-76418404 | None:intergenic | 15.0% |
| !!! | ACACATTTTACAATTTATTA+TGG | + | chr3.3:76418434-76418453 | MS.gene06698:intron | 15.0% |
| !!! | ATTCTCTTTTAAATAGTTAT+TGG | + | chr3.3:76419227-76419246 | MS.gene06698:intron | 15.0% |
| !!! | ATTTTTTAGAATATTGCAAA+TGG | - | chr3.3:76416445-76416464 | None:intergenic | 15.0% |
| !!! | CTTTTTTATTTTGTTTTTGA+TGG | - | chr3.3:76419597-76419616 | None:intergenic | 15.0% |
| !! | AAAAAGAAAACAGCAAAAAT+AGG | - | chr3.3:76418260-76418279 | None:intergenic | 20.0% |
| !! | AATATATATGAAACCAAATC+TGG | - | chr3.3:76419169-76419188 | None:intergenic | 20.0% |
| !! | AATTAAATCATATCTCATCA+TGG | - | chr3.3:76416389-76416408 | None:intergenic | 20.0% |
| !! | ACCCTTAAATATATCATATA+TGG | - | chr3.3:76417493-76417512 | None:intergenic | 20.0% |
| !! | AGCCATATATGATATATTTA+AGG | + | chr3.3:76417488-76417507 | MS.gene06698:intron | 20.0% |
| !! | ATTGAATAATGCAAGAAAAA+AGG | + | chr3.3:76416663-76416682 | MS.gene06698:CDS | 20.0% |
| !! | GCCATATATGATATATTTAA+GGG | + | chr3.3:76417489-76417508 | MS.gene06698:intron | 20.0% |
| !! | TTTATCGGTAAAATTAATGT+AGG | - | chr3.3:76417890-76417909 | None:intergenic | 20.0% |
| !!! | AATTGTTTTGCATCATTAAA+GGG | - | chr3.3:76415998-76416017 | None:intergenic | 20.0% |
| !!! | AGAATGTATCCAATATATTT+TGG | + | chr3.3:76413861-76413880 | MS.gene06698:CDS | 20.0% |
| !!! | AGATTTGGTTTCATATATAT+TGG | + | chr3.3:76419168-76419187 | MS.gene06698:intron | 20.0% |
| !!! | CTTTTTTTACTATTCTGATT+AGG | + | chr3.3:76418767-76418786 | MS.gene06698:intron | 20.0% |
| !!! | TCTCAATTTTATTTATTGTC+AGG | + | chr3.3:76414977-76414996 | MS.gene06698:intron | 20.0% |
| !!! | TTATTTTATATAAGCTCTCA+AGG | - | chr3.3:76415148-76415167 | None:intergenic | 20.0% |
| !!! | TTTAAGTTTCTAAATAAGCT+CGG | - | chr3.3:76417840-76417859 | None:intergenic | 20.0% |
| ! | AAAAAGTAAACCGTTGAAAA+AGG | + | chr3.3:76417907-76417926 | MS.gene06698:intron | 25.0% |
| ! | AACTTATCTACTTACAGTAT+GGG | - | chr3.3:76415218-76415237 | None:intergenic | 25.0% |
| ! | AATAAACTGAAAACAGCTTA+TGG | + | chr3.3:76415163-76415182 | MS.gene06698:intron | 25.0% |
| ! | ACATAAGTCTTCATTTCTTT+GGG | - | chr3.3:76414930-76414949 | None:intergenic | 25.0% |
| ! | ACATACATACAAACAACTAA+AGG | - | chr3.3:76418596-76418615 | None:intergenic | 25.0% |
| ! | ACATTAAAAAGAAGCCAAAA+AGG | - | chr3.3:76416486-76416505 | None:intergenic | 25.0% |
| ! | ACTTCACGTATATTATTACA+TGG | - | chr3.3:76417532-76417551 | None:intergenic | 25.0% |
| ! | ACTTTGCTGAATAAACAAAT+TGG | + | chr3.3:76416184-76416203 | MS.gene06698:CDS | 25.0% |
| ! | AGCAACTAATTCTAATTGAA+AGG | + | chr3.3:76416077-76416096 | MS.gene06698:CDS | 25.0% |
| ! | ATAAACATTAACCACATTGA+TGG | + | chr3.3:76418548-76418567 | MS.gene06698:intron | 25.0% |
| ! | ATTCAATCAAAGATTGTTTC+TGG | + | chr3.3:76416772-76416791 | MS.gene06698:CDS | 25.0% |
| ! | ATTCTTTACGTCATAAATAC+TGG | - | chr3.3:76419367-76419386 | None:intergenic | 25.0% |
| ! | CAAGAAACACCAAAATATAT+TGG | - | chr3.3:76413873-76413892 | None:intergenic | 25.0% |
| ! | CAATAATCTAATCACATAAG+AGG | + | chr3.3:76417627-76417646 | MS.gene06698:intron | 25.0% |
| ! | CTCTTATGTGATTAGATTAT+TGG | - | chr3.3:76417629-76417648 | None:intergenic | 25.0% |
| ! | CTTCACGTATATTATTACAT+GGG | - | chr3.3:76417531-76417550 | None:intergenic | 25.0% |
| ! | CTTGTTAAAAAAACCAAACA+TGG | - | chr3.3:76417261-76417280 | None:intergenic | 25.0% |
| ! | GAAAATAATTCAAATGTGAC+TGG | + | chr3.3:76417110-76417129 | MS.gene06698:intron | 25.0% |
| ! | GTATGTATGTTTGTAATCTA+GGG | + | chr3.3:76418606-76418625 | MS.gene06698:intron | 25.0% |
| ! | TACATAAGTCTTCATTTCTT+TGG | - | chr3.3:76414931-76414950 | None:intergenic | 25.0% |
| ! | TATAGACAAATAAACACTTG+AGG | - | chr3.3:76417019-76417038 | None:intergenic | 25.0% |
| ! | TATGTATGTTTGTAATCTAG+GGG | + | chr3.3:76418607-76418626 | MS.gene06698:intron | 25.0% |
| ! | TCAAATTGATCATGATTCAA+GGG | - | chr3.3:76415827-76415846 | None:intergenic | 25.0% |
| ! | TCATATATATTGGCATGTAA+TGG | + | chr3.3:76419178-76419197 | MS.gene06698:intron | 25.0% |
| ! | TGAATTGAATCAGAAATTGA+AGG | + | chr3.3:76414247-76414266 | MS.gene06698:CDS | 25.0% |
| ! | TGTATGTATGTTTGTAATCT+AGG | + | chr3.3:76418605-76418624 | MS.gene06698:intron | 25.0% |
| ! | TTACAATTGAGAGTAATGAA+TGG | + | chr3.3:76418815-76418834 | MS.gene06698:intron | 25.0% |
| ! | TTACAATTTATTATGGTGTC+TGG | + | chr3.3:76418441-76418460 | MS.gene06698:intron | 25.0% |
| ! | TTACTAGTTAGAAATTCTCT+AGG | - | chr3.3:76419022-76419041 | None:intergenic | 25.0% |
| ! | TTATGTGATTAGATTATTGG+AGG | - | chr3.3:76417626-76417645 | None:intergenic | 25.0% |
| ! | TTCAAAAGGAAGTGATAAAT+GGG | + | chr3.3:76414015-76414034 | MS.gene06698:CDS | 25.0% |
| ! | TTCTAATTTCACACTGTAAA+AGG | + | chr3.3:76417998-76418017 | MS.gene06698:intron | 25.0% |
| ! | TTTATTCAGCAAAGTAATCA+AGG | - | chr3.3:76416179-76416198 | None:intergenic | 25.0% |
| ! | TTTGTACAATAACTTCTGTT+TGG | - | chr3.3:76415254-76415273 | None:intergenic | 25.0% |
| !! | AAGCTATAAACTGTTTTCAT+CGG | + | chr3.3:76415118-76415137 | MS.gene06698:intron | 25.0% |
| !! | AGCAATAATGGAACTTAAAA+GGG | + | chr3.3:76416974-76416993 | MS.gene06698:intron | 25.0% |
| !! | TAAATTACTCAACTTTTGAC+TGG | - | chr3.3:76419411-76419430 | None:intergenic | 25.0% |
| !! | TAAGTGCTTGTTTGAATTTT+CGG | - | chr3.3:76418722-76418741 | None:intergenic | 25.0% |
| !! | TAGCAATAATGGAACTTAAA+AGG | + | chr3.3:76416973-76416992 | MS.gene06698:intron | 25.0% |
| !! | TTAAGTTGTTTATGCAAACA+AGG | - | chr3.3:76415003-76415022 | None:intergenic | 25.0% |
| !! | TTGTTCATTTGAAATATGTG+AGG | - | chr3.3:76414873-76414892 | None:intergenic | 25.0% |
| !! | TTTTTATTATTCCGAGGTTT+TGG | - | chr3.3:76418024-76418043 | None:intergenic | 25.0% |
| !!! | AAGAGTGTTTGAGAAAAAAA+GGG | + | chr3.3:76414211-76414230 | MS.gene06698:CDS | 25.0% |
| !!! | AATACTGTGTAATTTCTAGT+TGG | + | chr3.3:76419267-76419286 | MS.gene06698:intron | 25.0% |
| !!! | GAATTGTTTTGCATCATTAA+AGG | - | chr3.3:76415999-76416018 | None:intergenic | 25.0% |
| !!! | GTTCAACAACATGTTTTTAA+AGG | - | chr3.3:76414786-76414805 | None:intergenic | 25.0% |
| !!! | TAAGAGTGTTTGAGAAAAAA+AGG | + | chr3.3:76414210-76414229 | MS.gene06698:CDS | 25.0% |
| !!! | TCTTCTTCAATCTTATTTTC+TGG | - | chr3.3:76415875-76415894 | None:intergenic | 25.0% |
| !!! | TTCAACGGTTTACTTTTTAT+CGG | - | chr3.3:76417905-76417924 | None:intergenic | 25.0% |
| !!! | TTTCACTTTTTATTATTCCG+AGG | - | chr3.3:76418030-76418049 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTTTCATTGTTGC+AGG | + | chr3.3:76418270-76418289 | MS.gene06698:intron | 25.0% |
| AAAGCAAATGAGAAAGTTGT+AGG | + | chr3.3:76414107-76414126 | MS.gene06698:CDS | 30.0% | |
| AAAGCAAATGTTGTTGAAAG+AGG | + | chr3.3:76414673-76414692 | MS.gene06698:CDS | 30.0% | |
| AAATGAAAGACCTATTAGCA+AGG | - | chr3.3:76418175-76418194 | None:intergenic | 30.0% | |
| AAGAACATTCTTCTGATCTA+AGG | + | chr3.3:76414405-76414424 | MS.gene06698:CDS | 30.0% | |
| AAGCAAATGAGAAAGTTGTA+GGG | + | chr3.3:76414108-76414127 | MS.gene06698:CDS | 30.0% | |
| AAGGAATGATATGTTTGAGA+AGG | + | chr3.3:76416950-76416969 | MS.gene06698:CDS | 30.0% | |
| AATGAAAGACCTATTAGCAA+GGG | - | chr3.3:76418174-76418193 | None:intergenic | 30.0% | |
| ACAAATAAACACTTGAGGAA+AGG | - | chr3.3:76417014-76417033 | None:intergenic | 30.0% | |
| ACTTCAAAATTTGCCAGATT+TGG | + | chr3.3:76419153-76419172 | MS.gene06698:intron | 30.0% | |
| AGACAAAATAGGAGACAAAA+GGG | - | chr3.3:76415315-76415334 | None:intergenic | 30.0% | |
| AGATAAGAAGATTGAAGAAG+AGG | + | chr3.3:76414295-76414314 | MS.gene06698:CDS | 30.0% | |
| ATCTTGTTCTCCTTACTAAA+AGG | + | chr3.3:76418372-76418391 | MS.gene06698:CDS | 30.0% | |
| ATGATGAAGCTGAAAATTGA+TGG | - | chr3.3:76418237-76418256 | None:intergenic | 30.0% | |
| ATGTATGTTTGTAATCTAGG+GGG | + | chr3.3:76418608-76418627 | MS.gene06698:intron | 30.0% | |
| ATTAGTGAAGATAGCAAAGT+TGG | + | chr3.3:76416136-76416155 | MS.gene06698:CDS | 30.0% | |
| ATTCTAATTGAAAGGTTGAC+AGG | + | chr3.3:76416085-76416104 | MS.gene06698:CDS | 30.0% | |
| ATTGTTGAAACTATGCTTCA+AGG | + | chr3.3:76413957-76413976 | MS.gene06698:CDS | 30.0% | |
| CAAAGATATATTGTTGCAAC+AGG | + | chr3.3:76416733-76416752 | MS.gene06698:CDS | 30.0% | |
| CAATTGTAACTGAGCTTAAT+TGG | - | chr3.3:76418804-76418823 | None:intergenic | 30.0% | |
| CATAAGTCTTCATTTCTTTG+GGG | - | chr3.3:76414929-76414948 | None:intergenic | 30.0% | |
| GAAAATTCAAACAAGCACTT+AGG | + | chr3.3:76418721-76418740 | MS.gene06698:intron | 30.0% | |
| GAAAGAGGTTAAGTTATCAA+AGG | + | chr3.3:76414688-76414707 | MS.gene06698:CDS | 30.0% | |
| GAACTTATCTACTTACAGTA+TGG | - | chr3.3:76415219-76415238 | None:intergenic | 30.0% | |
| GAATCAGAAATTGAAGGAAA+TGG | + | chr3.3:76414253-76414272 | MS.gene06698:CDS | 30.0% | |
| GATGGTTCAGAAATTAACTT+TGG | + | chr3.3:76414565-76414584 | MS.gene06698:CDS | 30.0% | |
| GGTTTAGATATTTAAGCACA+TGG | + | chr3.3:76417365-76417384 | MS.gene06698:intron | 30.0% | |
| GTCAAATTGATCATGATTCA+AGG | - | chr3.3:76415828-76415847 | None:intergenic | 30.0% | |
| GTTCAAAAGGAAGTGATAAA+TGG | + | chr3.3:76414014-76414033 | MS.gene06698:CDS | 30.0% | |
| TACAAATGTGGTTGAGATTA+AGG | + | chr3.3:76418493-76418512 | MS.gene06698:intron | 30.0% | |
| TACTACCAAATCCTAAACTA+TGG | + | chr3.3:76419047-76419066 | MS.gene06698:intron | 30.0% | |
| TAGAAAGAGAAGAATATGAG+CGG | - | chr3.3:76417983-76418002 | None:intergenic | 30.0% | |
| TAGATATTTAAGCACATGGT+AGG | + | chr3.3:76417369-76417388 | MS.gene06698:intron | 30.0% | |
| TCAAAAGGAAGTGATAAATG+GGG | + | chr3.3:76414016-76414035 | MS.gene06698:CDS | 30.0% | |
| TCAGAAACATACCATAGTTT+AGG | - | chr3.3:76419061-76419080 | None:intergenic | 30.0% | |
| TGAAAAACAGCTAGAAATGA+TGG | + | chr3.3:76415763-76415782 | MS.gene06698:CDS | 30.0% | |
| TGATGAAGCTGAAAATTGAT+GGG | - | chr3.3:76418236-76418255 | None:intergenic | 30.0% | |
| TTAAGTTATCAAAGGCTAGA+AGG | + | chr3.3:76414696-76414715 | MS.gene06698:CDS | 30.0% | |
| TTACAGTATGGGAAAACTTA+TGG | - | chr3.3:76415207-76415226 | None:intergenic | 30.0% | |
| TTCAAAGAGGTTTAGAAGTT+CGG | + | chr3.3:76416884-76416903 | MS.gene06698:CDS | 30.0% | |
| TTTATTTGACAGTATGACGA+AGG | - | chr3.3:76417937-76417956 | None:intergenic | 30.0% | |
| TTTGCAATACCAAATGAAGT+TGG | - | chr3.3:76416572-76416591 | None:intergenic | 30.0% | |
| ! | AACGATTTTCTGACAGTATA+AGG | + | chr3.3:76416845-76416864 | MS.gene06698:CDS | 30.0% |
| ! | AAGAAGAAAAGCATGTTTGT+CGG | + | chr3.3:76415888-76415907 | MS.gene06698:CDS | 30.0% |
| ! | AATGATGGAAACTTTGATTG+AGG | + | chr3.3:76415778-76415797 | MS.gene06698:CDS | 30.0% |
| ! | ACATACCATAGTTTAGGATT+TGG | - | chr3.3:76419055-76419074 | None:intergenic | 30.0% |
| ! | ACCAATTTGCTTCAAAATTG+AGG | + | chr3.3:76415636-76415655 | MS.gene06698:CDS | 30.0% |
| ! | AGAAATAAGTTCCTCTTTTG+TGG | - | chr3.3:76414516-76414535 | None:intergenic | 30.0% |
| ! | AGGACACTCTTTTAAATGAA+TGG | + | chr3.3:76417389-76417408 | MS.gene06698:intron | 30.0% |
| ! | ATTTTGCAAAAGCTGCATTT+TGG | - | chr3.3:76418661-76418680 | None:intergenic | 30.0% |
| ! | CATTTTCTGAACTTGTATAG+AGG | + | chr3.3:76418931-76418950 | MS.gene06698:intron | 30.0% |
| ! | CTTTTGCAAAATCATGGTAA+AGG | + | chr3.3:76418669-76418688 | MS.gene06698:intron | 30.0% |
| ! | GATTCTACTTCTGTTATTTG+AGG | + | chr3.3:76417584-76417603 | MS.gene06698:intron | 30.0% |
| ! | TGAGTAATTTCTGAAGATTG+CGG | - | chr3.3:76415698-76415717 | None:intergenic | 30.0% |
| ! | TTTTTCTCAACTTCAACTTG+TGG | - | chr3.3:76413927-76413946 | None:intergenic | 30.0% |
| !! | AAGATTGTTTCTGGATTTGT+TGG | + | chr3.3:76416781-76416800 | MS.gene06698:CDS | 30.0% |
| !! | CAACAATGTGAGATTTTGAT+TGG | + | chr3.3:76417192-76417211 | MS.gene06698:intron | 30.0% |
| !! | TATTTTTATGCCTTCTGCAT+TGG | + | chr3.3:76416274-76416293 | MS.gene06698:intron | 30.0% |
| !! | TCATAAATACTGGTTTGCAA+GGG | - | chr3.3:76419357-76419376 | None:intergenic | 30.0% |
| !! | TTGTTTCTAAAGCAGTTTGA+AGG | - | chr3.3:76415662-76415681 | None:intergenic | 30.0% |
| !!! | ATCAACACTAGAGCATTTTT+TGG | + | chr3.3:76416693-76416712 | MS.gene06698:CDS | 30.0% |
| AAAACAATTCCAGTGGAAGA+TGG | + | chr3.3:76416009-76416028 | MS.gene06698:CDS | 35.0% | |
| AAATGGATGTTCCATCAATG+TGG | - | chr3.3:76418562-76418581 | None:intergenic | 35.0% | |
| AAATTACTCAAGATCCTGTC+TGG | + | chr3.3:76415708-76415727 | MS.gene06698:CDS | 35.0% | |
| AAGATTGTGAAGAGAAAACC+AGG | + | chr3.3:76415740-76415759 | MS.gene06698:CDS | 35.0% | |
| AATCCTATCTTGAACAGAGA+GGG | + | chr3.3:76418987-76419006 | MS.gene06698:intron | 35.0% | |
| AATGTAGGATCCACATTGAT+AGG | - | chr3.3:76417875-76417894 | None:intergenic | 35.0% | |
| AGAACAAGATCAATGGTTTG+TGG | - | chr3.3:76418362-76418381 | None:intergenic | 35.0% | |
| AGAAGAGGAGAAAAAGAGAA+AGG | + | chr3.3:76414310-76414329 | MS.gene06698:CDS | 35.0% | |
| AGAATTATAGGTGACCTTGA+GGG | + | chr3.3:76416913-76416932 | MS.gene06698:CDS | 35.0% | |
| AGTAAGGAGAACAAGATCAA+TGG | - | chr3.3:76418369-76418388 | None:intergenic | 35.0% | |
| AGTGAAAACCCAGTTTCAAT+TGG | + | chr3.3:76418043-76418062 | MS.gene06698:intron | 35.0% | |
| ATGATGCAAAACAATTCCAG+TGG | + | chr3.3:76416002-76416021 | MS.gene06698:CDS | 35.0% | |
| ATGTAGGATCCACATTGATA+GGG | - | chr3.3:76417874-76417893 | None:intergenic | 35.0% | |
| ATTGATGCTGCTGAAAAGAT+AGG | + | chr3.3:76415959-76415978 | MS.gene06698:CDS | 35.0% | |
| CAAAAACCTTTCCTCCAAAA+AGG | - | chr3.3:76418304-76418323 | None:intergenic | 35.0% | |
| CAAAAGGAAGTGATAAATGG+GGG | + | chr3.3:76414017-76414036 | MS.gene06698:CDS | 35.0% | |
| CAATGGTGAGTAAATTGACA+TGG | - | chr3.3:76418079-76418098 | None:intergenic | 35.0% | |
| CAATTTACTCACCATTGACA+TGG | + | chr3.3:76418082-76418101 | MS.gene06698:intron | 35.0% | |
| CAGAAATTGAAGGAAATGGA+GGG | + | chr3.3:76414257-76414276 | MS.gene06698:CDS | 35.0% | |
| CTAAACCTCTTTGAACTTCA+TGG | - | chr3.3:76416879-76416898 | None:intergenic | 35.0% | |
| CTATTCCATGAAGTTCAAAG+AGG | + | chr3.3:76416871-76416890 | MS.gene06698:CDS | 35.0% | |
| GAAATTGGAGAGCTTATTGT+TGG | + | chr3.3:76415583-76415602 | MS.gene06698:CDS | 35.0% | |
| GAATTGCGTTGTGAATAAGT+TGG | + | chr3.3:76419289-76419308 | MS.gene06698:intron | 35.0% | |
| GAGACAAAATAGGAGACAAA+AGG | - | chr3.3:76415316-76415335 | None:intergenic | 35.0% | |
| GAGACATGACAAGATGAAAT+TGG | + | chr3.3:76415568-76415587 | MS.gene06698:CDS | 35.0% | |
| GAGCGGTAGATTATATCAAA+CGG | - | chr3.3:76417966-76417985 | None:intergenic | 35.0% | |
| GAGTATCTTACAAGATCAAG+AGG | + | chr3.3:76416047-76416066 | MS.gene06698:CDS | 35.0% | |
| GATCAAAGATGAGAAGTTAG+AGG | + | chr3.3:76415457-76415476 | MS.gene06698:CDS | 35.0% | |
| GATTGAGGAAGTTTGTGAAA+AGG | + | chr3.3:76415793-76415812 | MS.gene06698:CDS | 35.0% | |
| GATTGTGTGGAAAGTTCAAA+AGG | + | chr3.3:76414001-76414020 | MS.gene06698:CDS | 35.0% | |
| GCATCAATTTCTCTGTGATT+TGG | - | chr3.3:76415947-76415966 | None:intergenic | 35.0% | |
| GTGAGTAAATTGACATGGAT+TGG | - | chr3.3:76418074-76418093 | None:intergenic | 35.0% | |
| GTTTGAGAAGGTAGCAATAA+TGG | + | chr3.3:76416962-76416981 | MS.gene06698:intron | 35.0% | |
| TACTTGTGTCCAACTTCATT+TGG | + | chr3.3:76416560-76416579 | MS.gene06698:intron | 35.0% | |
| TATCTTTGTCAATGCTTCAC+AGG | + | chr3.3:76418470-76418489 | MS.gene06698:intron | 35.0% | |
| TCAAACAAGCACTTAGGTTA+GGG | + | chr3.3:76418727-76418746 | MS.gene06698:intron | 35.0% | |
| TCAGAAATTGAAGGAAATGG+AGG | + | chr3.3:76414256-76414275 | MS.gene06698:CDS | 35.0% | |
| TGGAAGAACCAATTGAAACT+GGG | - | chr3.3:76418054-76418073 | None:intergenic | 35.0% | |
| TGTATGTTTGTAATCTAGGG+GGG | + | chr3.3:76418609-76418628 | MS.gene06698:intron | 35.0% | |
| TTAGCACAGCTCCAATATAT+GGG | + | chr3.3:76419705-76419724 | MS.gene06698:CDS | 35.0% | |
| TTCAAACAAGCACTTAGGTT+AGG | + | chr3.3:76418726-76418745 | MS.gene06698:intron | 35.0% | |
| TTGGAAGAACCAATTGAAAC+TGG | - | chr3.3:76418055-76418074 | None:intergenic | 35.0% | |
| TTTCTGAACTTGTATAGAGG+TGG | + | chr3.3:76418934-76418953 | MS.gene06698:intron | 35.0% | |
| TTTGACTGGATAAACCAGAT+GGG | - | chr3.3:76419397-76419416 | None:intergenic | 35.0% | |
| ! | AAAGCTGGTTTAGTGAAAGA+AGG | + | chr3.3:76414150-76414169 | MS.gene06698:CDS | 35.0% |
| ! | AGAAGAAAAGCATGTTTGTC+GGG | + | chr3.3:76415889-76415908 | MS.gene06698:CDS | 35.0% |
| ! | ATATGGCTTTTGTCTCAAAC+TGG | - | chr3.3:76417476-76417495 | None:intergenic | 35.0% |
| ! | ATGCAGCTTTTGCAAAATCA+TGG | + | chr3.3:76418663-76418682 | MS.gene06698:intron | 35.0% |
| ! | ATGCTTTTGCAGAACAAATG+AGG | + | chr3.3:76415435-76415454 | MS.gene06698:CDS | 35.0% |
| ! | TTTGGAGGAAAGGTTTTTGT+GGG | + | chr3.3:76418305-76418324 | MS.gene06698:CDS | 35.0% |
| !! | AGAGGAACTTATTTCTGTCA+TGG | + | chr3.3:76414520-76414539 | MS.gene06698:CDS | 35.0% |
| !! | ATGAGAAGTTAGAGGCATTT+AGG | + | chr3.3:76415465-76415484 | MS.gene06698:CDS | 35.0% |
| !! | GTCATAAATACTGGTTTGCA+AGG | - | chr3.3:76419358-76419377 | None:intergenic | 35.0% |
| !! | TCAATACCTTTTTGGAGGAA+AGG | + | chr3.3:76418295-76418314 | MS.gene06698:CDS | 35.0% |
| !! | TTTTGACTGGATAAACCAGA+TGG | - | chr3.3:76419398-76419417 | None:intergenic | 35.0% |
| !! | TTTTGGAGGAAAGGTTTTTG+TGG | + | chr3.3:76418304-76418323 | MS.gene06698:CDS | 35.0% |
| !!! | AACACTAGAGCATTTTTTGG+AGG | + | chr3.3:76416696-76416715 | MS.gene06698:CDS | 35.0% |
| !!! | ATTTCTAGCTGTTTTTCACC+TGG | - | chr3.3:76415761-76415780 | None:intergenic | 35.0% |
| !!! | GCCTCAATTTTGAAGCAAAT+TGG | - | chr3.3:76415640-76415659 | None:intergenic | 35.0% |
| AAAAGAGGTTGCTCTCTAGT+TGG | + | chr3.3:76419612-76419631 | MS.gene06698:CDS | 40.0% | |
| AAAGAATGTATCAGCCCATC+TGG | + | chr3.3:76419380-76419399 | MS.gene06698:intron | 40.0% | |
| AAAGAGGTTGCTCTCTAGTT+GGG | + | chr3.3:76419613-76419632 | MS.gene06698:CDS | 40.0% | |
| AATGTCCTCTATGCAAATCG+CGG | + | chr3.3:76416637-76416656 | MS.gene06698:CDS | 40.0% | |
| ACAGCTCCAATATATGGGAT+AGG | + | chr3.3:76419710-76419729 | MS.gene06698:CDS | 40.0% | |
| ACGCTAAACGTTTGGAAGAT+TGG | + | chr3.3:76415351-76415370 | MS.gene06698:CDS | 40.0% | |
| ACTGTAAAAGGCCAAAACCT+CGG | + | chr3.3:76418010-76418029 | MS.gene06698:intron | 40.0% | |
| AGAATGCGTGAAACGTGAAT+AGG | - | chr3.3:76419212-76419231 | None:intergenic | 40.0% | |
| AGACATCTTGAAGCTGAACT+CGG | + | chr3.3:76414467-76414486 | MS.gene06698:CDS | 40.0% | |
| AGAGAATCTGCTAAACGTGA+AGG | + | chr3.3:76414380-76414399 | MS.gene06698:CDS | 40.0% | |
| AGAGTCTACTAAAGCGACAA+TGG | + | chr3.3:76417797-76417816 | MS.gene06698:intron | 40.0% | |
| AGGAAACTTCGACAACAGAT+TGG | + | chr3.3:76414170-76414189 | MS.gene06698:CDS | 40.0% | |
| ATCCTATCTTGAACAGAGAG+GGG | + | chr3.3:76418988-76419007 | MS.gene06698:intron | 40.0% | |
| ATGCAACCCTGATTGAACAA+AGG | + | chr3.3:76415396-76415415 | MS.gene06698:CDS | 40.0% | |
| ATGCAGCATAGTTCTTCAAC+AGG | + | chr3.3:76414845-76414864 | MS.gene06698:CDS | 40.0% | |
| ATGCTTCACAGGTACAAATG+TGG | + | chr3.3:76418481-76418500 | MS.gene06698:intron | 40.0% | |
| CAAAACTGCTTTCATTGAGC+TGG | + | chr3.3:76414433-76414452 | MS.gene06698:CDS | 40.0% | |
| CAGAATTATAGGTGACCTTG+AGG | + | chr3.3:76416912-76416931 | MS.gene06698:CDS | 40.0% | |
| CATATATTGGAGCTGTGCTA+AGG | - | chr3.3:76419706-76419725 | None:intergenic | 40.0% | |
| CATTCGTTTGCAAAGATCGT+CGG | - | chr3.3:76416236-76416255 | None:intergenic | 40.0% | |
| CGCTAAACGTTTGGAAGATT+GGG | + | chr3.3:76415352-76415371 | MS.gene06698:CDS | 40.0% | |
| CTCAAGGTCACCTATAATTC+TGG | - | chr3.3:76416914-76416933 | None:intergenic | 40.0% | |
| CTGAGCATGAAACAGAAAAG+TGG | + | chr3.3:76414726-76414745 | MS.gene06698:CDS | 40.0% | |
| CTTAGCACAGCTCCAATATA+TGG | + | chr3.3:76419704-76419723 | MS.gene06698:CDS | 40.0% | |
| GAATCCTATCTTGAACAGAG+AGG | + | chr3.3:76418986-76419005 | MS.gene06698:intron | 40.0% | |
| GAGAAAGGAGCTAGAAGAAA+AGG | + | chr3.3:76414325-76414344 | MS.gene06698:CDS | 40.0% | |
| GCATGTTATCCAAGACACTT+AGG | + | chr3.3:76417226-76417245 | MS.gene06698:intron | 40.0% | |
| GGAATGGCTAGAGACAAAAT+AGG | - | chr3.3:76415326-76415345 | None:intergenic | 40.0% | |
| GGCAAGTAGTGATCAGAAAT+AGG | - | chr3.3:76414908-76414927 | None:intergenic | 40.0% | |
| GTAAGGGTAACAACTTCAGA+TGG | - | chr3.3:76419524-76419543 | None:intergenic | 40.0% | |
| GTGATGCCTTTGTTCAATCA+GGG | - | chr3.3:76415405-76415424 | None:intergenic | 40.0% | |
| GTTGAACTTGAGTTCGAGAA+AGG | + | chr3.3:76414799-76414818 | MS.gene06698:CDS | 40.0% | |
| TCAGTTGCACCAATTGTTCA+CGG | - | chr3.3:76419547-76419566 | None:intergenic | 40.0% | |
| TGAGGAAGTTTGTGAAAAGG+AGG | + | chr3.3:76415796-76415815 | MS.gene06698:CDS | 40.0% | |
| TGCGAAGTTTCACAAGGATT+TGG | + | chr3.3:76414592-76414611 | MS.gene06698:CDS | 40.0% | |
| TGTGATGCCTTTGTTCAATC+AGG | - | chr3.3:76415406-76415425 | None:intergenic | 40.0% | |
| TTCTCTTCTCCCTTGCTAAT+AGG | + | chr3.3:76418162-76418181 | MS.gene06698:intron | 40.0% | |
| TTCTGTCATGGAGAACAAAG+AGG | + | chr3.3:76414532-76414551 | MS.gene06698:CDS | 40.0% | |
| TTTGGACTTTGATACTGCAC+AGG | - | chr3.3:76415929-76415948 | None:intergenic | 40.0% | |
| ! | AAAGATCGTCGGTCTTTTCT+TGG | - | chr3.3:76416225-76416244 | None:intergenic | 40.0% |
| ! | AGGCTTCAATACCTTTTTGG+AGG | + | chr3.3:76418290-76418309 | MS.gene06698:intron | 40.0% |
| ! | CAAAGAGGAGTCTGATTTGA+TGG | + | chr3.3:76414547-76414566 | MS.gene06698:CDS | 40.0% |
| ! | GATGTTTTCCCTAGTTCAAG+AGG | + | chr3.3:76414821-76414840 | MS.gene06698:CDS | 40.0% |
| ! | TAAAGAGTGCACTTCTTAGC+TGG | + | chr3.3:76419636-76419655 | MS.gene06698:CDS | 40.0% |
| ! | TGCAGGCTTCAATACCTTTT+TGG | + | chr3.3:76418287-76418306 | MS.gene06698:intron | 40.0% |
| !! | AAAGCTGAAAAGTGCTGAGA+TGG | + | chr3.3:76414046-76414065 | MS.gene06698:CDS | 40.0% |
| !! | ACAAAGGCATCACATAGAGT+TGG | + | chr3.3:76415412-76415431 | MS.gene06698:CDS | 40.0% |
| !! | AGAAGTTAGAGGCATTTAGG+TGG | + | chr3.3:76415468-76415487 | MS.gene06698:CDS | 40.0% |
| !! | TGTTTCTGGATTTGTTGGAG+TGG | + | chr3.3:76416786-76416805 | MS.gene06698:CDS | 40.0% |
| !!! | CGAAGGCAATCCTTTTTCAA+CGG | - | chr3.3:76417920-76417939 | None:intergenic | 40.0% |
| AAAGCAGCTTCAGTCACACT+TGG | + | chr3.3:76415517-76415536 | MS.gene06698:CDS | 45.0% | |
| AAGATGGATCTTCATGCGCT+TGG | + | chr3.3:76416025-76416044 | MS.gene06698:CDS | 45.0% | |
| AAGTGGAGAGAAGCTTCAGA+AGG | + | chr3.3:76414743-76414762 | MS.gene06698:CDS | 45.0% | |
| ACATTAGACGCCAATGCAGA+AGG | - | chr3.3:76416334-76416353 | None:intergenic | 45.0% | |
| ACCACTTCTCCTAAGTGTCT+TGG | - | chr3.3:76417238-76417257 | None:intergenic | 45.0% | |
| ACGTTTAGCGTTAGCAGGAA+TGG | - | chr3.3:76415342-76415361 | None:intergenic | 45.0% | |
| ATCTTGACTCTAGACCAGAC+AGG | - | chr3.3:76415725-76415744 | None:intergenic | 45.0% | |
| ATTCTCCGCGATTTGCATAG+AGG | - | chr3.3:76416645-76416664 | None:intergenic | 45.0% | |
| ATTTGCAGTACCATTCCTGC+TGG | + | chr3.3:76419491-76419510 | MS.gene06698:intron | 45.0% | |
| CAATTGGTGCAACTGAAGCT+AGG | + | chr3.3:76419551-76419570 | MS.gene06698:CDS | 45.0% | |
| CACCAATTGTTCACGGGTAA+GGG | - | chr3.3:76419540-76419559 | None:intergenic | 45.0% | |
| CAGAGAGCTACGACTGATAT+CGG | + | chr3.3:76418887-76418906 | MS.gene06698:intron | 45.0% | |
| CAGTTGCACCAATTGTTCAC+GGG | - | chr3.3:76419546-76419565 | None:intergenic | 45.0% | |
| CATGAAGATCCATCTTCCAC+TGG | - | chr3.3:76416021-76416040 | None:intergenic | 45.0% | |
| CGACGATCTTTGCAAACGAA+TGG | + | chr3.3:76416234-76416253 | MS.gene06698:CDS | 45.0% | |
| CGGTGAGCTTTGCAAAATCA+CGG | - | chr3.3:76418702-76418721 | None:intergenic | 45.0% | |
| CTTTGATACTGCACAGGAGT+AGG | - | chr3.3:76415923-76415942 | None:intergenic | 45.0% | |
| GAAGGAAATGGAGGGTTTGA+TGG | + | chr3.3:76414265-76414284 | MS.gene06698:CDS | 45.0% | |
| GAGCTTATTGTTGGAGAGAG+AGG | + | chr3.3:76415592-76415611 | MS.gene06698:CDS | 45.0% | |
| GCATTTGGATGCCACAAAAG+AGG | + | chr3.3:76414502-76414521 | MS.gene06698:CDS | 45.0% | |
| GGAGATTGCGAAGTTTCACA+AGG | + | chr3.3:76414586-76414605 | MS.gene06698:CDS | 45.0% | |
| GGTGAAGAAGAATCAGCATG+AGG | - | chr3.3:76418341-76418360 | None:intergenic | 45.0% | |
| GGTTGCATACCTTTCTGTCT+CGG | - | chr3.3:76415384-76415403 | None:intergenic | 45.0% | |
| GTTCGGACAGCCAGAATTAT+AGG | + | chr3.3:76416901-76416920 | MS.gene06698:CDS | 45.0% | |
| TACCCTTACCCGTGAACAAT+TGG | + | chr3.3:76419535-76419554 | MS.gene06698:CDS | 45.0% | |
| TAGGAGAAGTGGTCCATGTT+TGG | + | chr3.3:76417245-76417264 | MS.gene06698:intron | 45.0% | |
| TCAGATGGAAAATCACCAGC+AGG | - | chr3.3:76419509-76419528 | None:intergenic | 45.0% | |
| TCCAAACGTTTAGCGTTAGC+AGG | - | chr3.3:76415347-76415366 | None:intergenic | 45.0% | |
| TCCAAGACACTTAGGAGAAG+TGG | + | chr3.3:76417234-76417253 | MS.gene06698:intron | 45.0% | |
| TCCTGCTAACGCTAAACGTT+TGG | + | chr3.3:76415343-76415362 | MS.gene06698:CDS | 45.0% | |
| TGAGCTTTGCAAAATCACGG+TGG | - | chr3.3:76418699-76418718 | None:intergenic | 45.0% | |
| TGATTAGACGCCAATGCAGA+AGG | - | chr3.3:76416287-76416306 | None:intergenic | 45.0% | |
| TGCACTTCTTAGCTGGAAGA+AGG | + | chr3.3:76419643-76419662 | MS.gene06698:CDS | 45.0% | |
| TGGAAAATCACCAGCAGGAA+TGG | - | chr3.3:76419504-76419523 | None:intergenic | 45.0% | |
| TTGCTGCACAAGAACAAAGC+TGG | + | chr3.3:76414135-76414154 | MS.gene06698:CDS | 45.0% | |
| ! | AGAAAAGCATGTTTGTCGGG+AGG | + | chr3.3:76415892-76415911 | MS.gene06698:CDS | 45.0% |
| ! | GAAGAGATGGAGAAAAGTGC+TGG | + | chr3.3:76416811-76416830 | MS.gene06698:CDS | 45.0% |
| ! | TGAGTCGTGTGAGTCCTTTT+TGG | + | chr3.3:76416469-76416488 | MS.gene06698:intron | 45.0% |
| !! | AAGGAAGTGCACAGCTTTTG+GGG | + | chr3.3:76413976-76413995 | MS.gene06698:CDS | 45.0% |
| !! | CAAGGAAGTGCACAGCTTTT+GGG | + | chr3.3:76413975-76413994 | MS.gene06698:CDS | 45.0% |
| !! | TCAAGGAAGTGCACAGCTTT+TGG | + | chr3.3:76413974-76413993 | MS.gene06698:CDS | 45.0% |
| !!! | AGCTTTTGGGGTTGATTGTG+TGG | + | chr3.3:76413988-76414007 | MS.gene06698:CDS | 45.0% |
| !! | AAAAAAAAAAAAAAACTAAA+CGG | + | chr3.3:76417135-76417154 | MS.gene06698:intron | 5.0% |
| AAGTCCTCGCCCTATCAATG+TGG | + | chr3.3:76417862-76417881 | MS.gene06698:intron | 50.0% | |
| AGCAAGGGAGAAGAGAACAG+TGG | - | chr3.3:76418159-76418178 | None:intergenic | 50.0% | |
| AGCCCCTCTCTGTTCAAGAT+AGG | - | chr3.3:76418993-76419012 | None:intergenic | 50.0% | |
| AGGTGACCTTGAGGGAACAT+TGG | + | chr3.3:76416921-76416940 | MS.gene06698:CDS | 50.0% | |
| CAGCTTCAGTCACACTTGGA+GGG | + | chr3.3:76415521-76415540 | MS.gene06698:CDS | 50.0% | |
| GCACCAATTGTTCACGGGTA+AGG | - | chr3.3:76419541-76419560 | None:intergenic | 50.0% | |
| GCTGCATGCCTCTTGAACTA+GGG | - | chr3.3:76414832-76414851 | None:intergenic | 50.0% | |
| GGAAATGGAGGGTTTGATGG+AGG | + | chr3.3:76414268-76414287 | MS.gene06698:CDS | 50.0% | |
| GGAAGTGATAAATGGGGGAG+AGG | + | chr3.3:76414022-76414041 | MS.gene06698:CDS | 50.0% | |
| TCAGTCACACTTGGAGGGAT+TGG | + | chr3.3:76415526-76415545 | MS.gene06698:CDS | 50.0% | |
| TGCTGCATGCCTCTTGAACT+AGG | - | chr3.3:76414833-76414852 | None:intergenic | 50.0% | |
| TGTTGGAGTGGCAGAAGAGA+TGG | + | chr3.3:76416798-76416817 | MS.gene06698:CDS | 50.0% | |
| ! | ACACTTGGAGGGATTGGTGA+AGG | + | chr3.3:76415532-76415551 | MS.gene06698:CDS | 50.0% |
| ! | TGTGTCGACGTGTCAAACAC+TGG | - | chr3.3:76418419-76418438 | None:intergenic | 50.0% |
| CACGAGCCAATGTTCCCTCA+AGG | - | chr3.3:76416930-76416949 | None:intergenic | 55.0% | |
| CGGTCGCGCTGTTAAGCATT+TGG | + | chr3.3:76414487-76414506 | MS.gene06698:CDS | 55.0% | |
| GCAGCTTCAGTCACACTTGG+AGG | + | chr3.3:76415520-76415539 | MS.gene06698:CDS | 55.0% | |
| GGATCCACATTGATAGGGCG+AGG | - | chr3.3:76417869-76417888 | None:intergenic | 55.0% | |
| !! | GAGGGAACATTGGCTCGTGA+AGG | + | chr3.3:76416931-76416950 | MS.gene06698:CDS | 55.0% |
| GGGTGAGAGCCGAGACAGAA+AGG | + | chr3.3:76415372-76415391 | MS.gene06698:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 76413813 | 76419736 | 76413813 | ID=MS.gene06698 |
| chr3.3 | mRNA | 76413813 | 76419736 | 76413813 | ID=MS.gene06698.t1;Parent=MS.gene06698 |
| chr3.3 | exon | 76413813 | 76414947 | 76413813 | ID=MS.gene06698.t1.exon1;Parent=MS.gene06698.t1 |
| chr3.3 | CDS | 76413813 | 76414947 | 76413813 | ID=cds.MS.gene06698.t1;Parent=MS.gene06698.t1 |
| chr3.3 | exon | 76415339 | 76416255 | 76415339 | ID=MS.gene06698.t1.exon2;Parent=MS.gene06698.t1 |
| chr3.3 | CDS | 76415339 | 76416255 | 76415339 | ID=cds.MS.gene06698.t1;Parent=MS.gene06698.t1 |
| chr3.3 | exon | 76416631 | 76416971 | 76416631 | ID=MS.gene06698.t1.exon3;Parent=MS.gene06698.t1 |
| chr3.3 | CDS | 76416631 | 76416971 | 76416631 | ID=cds.MS.gene06698.t1;Parent=MS.gene06698.t1 |
| chr3.3 | exon | 76418292 | 76418393 | 76418292 | ID=MS.gene06698.t1.exon4;Parent=MS.gene06698.t1 |
| chr3.3 | CDS | 76418292 | 76418393 | 76418292 | ID=cds.MS.gene06698.t1;Parent=MS.gene06698.t1 |
| chr3.3 | exon | 76419499 | 76419736 | 76419499 | ID=MS.gene06698.t1.exon5;Parent=MS.gene06698.t1 |
| chr3.3 | CDS | 76419499 | 76419736 | 76419499 | ID=cds.MS.gene06698.t1;Parent=MS.gene06698.t1 |
| Gene Sequence |
| Protein sequence |
