Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21868.t1 | RHN53403.1 | 98.7 | 389 | 5 | 0 | 1 | 389 | 50 | 438 | 1.10E-221 | 778.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21868.t1 | P30077 | 98.7 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 7.9e-224 | 777.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21868.t1 | A0A072UNH2 | 98.7 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 8.1e-222 | 778.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene21868 | -0.808859 | 2.52E-50 | -1.69E-46 |
| MS.gene049259 | MS.gene21868 | 0.815256 | 1.01E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene21868 | -0.803199 | 3.91E-49 | -1.69E-46 |
| MS.gene049483 | MS.gene21868 | 0.821114 | 4.80E-53 | -1.69E-46 |
| MS.gene049549 | MS.gene21868 | 0.812028 | 5.21E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene21868 | 0.840802 | 6.98E-58 | -1.69E-46 |
| MS.gene049634 | MS.gene21868 | 0.819025 | 1.44E-52 | -1.69E-46 |
| MS.gene050082 | MS.gene21868 | 0.804936 | 1.70E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene21868 | -0.82091 | 5.34E-53 | -1.69E-46 |
| MS.gene050380 | MS.gene21868 | 0.815818 | 7.61E-52 | -1.69E-46 |
| MS.gene050381 | MS.gene21868 | 0.873672 | 1.23E-67 | -1.69E-46 |
| MS.gene050504 | MS.gene21868 | -0.817533 | 3.14E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene21868 | -0.826233 | 3.04E-54 | -1.69E-46 |
| MS.gene050833 | MS.gene21868 | 0.802061 | 6.71E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene21868 | -0.815592 | 8.54E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene21868 | -0.816229 | 6.16E-52 | -1.69E-46 |
| MS.gene050883 | MS.gene21868 | 0.906661 | 1.17E-80 | -1.69E-46 |
| MS.gene050986 | MS.gene21868 | -0.801027 | 1.09E-48 | -1.69E-46 |
| MS.gene051044 | MS.gene21868 | 0.812436 | 4.24E-51 | -1.69E-46 |
| MS.gene05104 | MS.gene21868 | 0.819747 | 9.87E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene21868 | 0.872343 | 3.42E-67 | -1.69E-46 |
| MS.gene051138 | MS.gene21868 | 0.840727 | 7.30E-58 | -1.69E-46 |
| MS.gene051364 | MS.gene21868 | 0.837607 | 4.70E-57 | -1.69E-46 |
| MS.gene051366 | MS.gene21868 | 0.829469 | 5.06E-55 | -1.69E-46 |
| MS.gene051367 | MS.gene21868 | 0.810758 | 9.83E-51 | -1.69E-46 |
| MS.gene051410 | MS.gene21868 | 0.809156 | 2.17E-50 | -1.69E-46 |
| MS.gene051632 | MS.gene21868 | 0.812801 | 3.53E-51 | -1.69E-46 |
| MS.gene051863 | MS.gene21868 | 0.814249 | 1.70E-51 | -1.69E-46 |
| MS.gene052211 | MS.gene21868 | 0.807535 | 4.82E-50 | -1.69E-46 |
| MS.gene053069 | MS.gene21868 | 0.813795 | 2.14E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene21868 | 0.85537 | 6.60E-62 | -1.69E-46 |
| MS.gene053488 | MS.gene21868 | 0.826877 | 2.13E-54 | -1.69E-46 |
| MS.gene053561 | MS.gene21868 | 0.83574 | 1.41E-56 | -1.69E-46 |
| MS.gene053826 | MS.gene21868 | 0.821622 | 3.66E-53 | -1.69E-46 |
| MS.gene053887 | MS.gene21868 | 0.812283 | 4.58E-51 | -1.69E-46 |
| MS.gene054056 | MS.gene21868 | 0.809315 | 2.01E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene21868 | -0.801322 | 9.51E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene21868 | 0.80227 | 6.07E-49 | -1.69E-46 |
| MS.gene054707 | MS.gene21868 | 0.800748 | 1.25E-48 | -1.69E-46 |
| MS.gene054708 | MS.gene21868 | 0.826297 | 2.93E-54 | -1.69E-46 |
| MS.gene055124 | MS.gene21868 | 0.879351 | 1.34E-69 | -1.69E-46 |
| MS.gene055139 | MS.gene21868 | 0.835496 | 1.62E-56 | -1.69E-46 |
| MS.gene055154 | MS.gene21868 | 0.870861 | 1.06E-66 | -1.69E-46 |
| MS.gene055202 | MS.gene21868 | 0.832037 | 1.19E-55 | -1.69E-46 |
| MS.gene055240 | MS.gene21868 | 0.807569 | 4.74E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene21868 | -0.804826 | 1.79E-49 | -1.69E-46 |
| MS.gene055942 | MS.gene21868 | 0.800801 | 1.22E-48 | -1.69E-46 |
| MS.gene055959 | MS.gene21868 | 0.831819 | 1.34E-55 | -1.69E-46 |
| MS.gene056218 | MS.gene21868 | 0.800744 | 1.25E-48 | -1.69E-46 |
| MS.gene056224 | MS.gene21868 | 0.842755 | 2.13E-58 | -1.69E-46 |
| MS.gene056298 | MS.gene21868 | 0.8386 | 2.61E-57 | -1.69E-46 |
| MS.gene056310 | MS.gene21868 | 0.855475 | 6.15E-62 | -1.69E-46 |
| MS.gene056311 | MS.gene21868 | 0.874842 | 4.92E-68 | -1.69E-46 |
| MS.gene056313 | MS.gene21868 | 0.853794 | 1.89E-61 | -1.69E-46 |
| MS.gene056504 | MS.gene21868 | -0.83323 | 6.01E-56 | -1.69E-46 |
| MS.gene056590 | MS.gene21868 | 0.802565 | 5.28E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene21868 | 0.800721 | 1.26E-48 | -1.69E-46 |
| MS.gene056748 | MS.gene21868 | 0.806272 | 8.92E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene21868 | 0.821579 | 3.75E-53 | -1.69E-46 |
| MS.gene057014 | MS.gene21868 | 0.815786 | 7.74E-52 | -1.69E-46 |
| MS.gene057549 | MS.gene21868 | 0.8081 | 3.66E-50 | -1.69E-46 |
| MS.gene057550 | MS.gene21868 | 0.825082 | 5.69E-54 | -1.69E-46 |
| MS.gene057768 | MS.gene21868 | 0.832515 | 9.05E-56 | -1.69E-46 |
| MS.gene058068 | MS.gene21868 | 0.816983 | 4.17E-52 | -1.69E-46 |
| MS.gene058093 | MS.gene21868 | 0.848679 | 5.26E-60 | -1.69E-46 |
| MS.gene058099 | MS.gene21868 | 0.88415 | 2.45E-71 | -1.69E-46 |
| MS.gene058103 | MS.gene21868 | 0.813172 | 2.93E-51 | -1.69E-46 |
| MS.gene058108 | MS.gene21868 | 0.919106 | 6.81E-87 | -1.69E-46 |
| MS.gene058109 | MS.gene21868 | 0.959715 | 9.52E-118 | -1.69E-46 |
| MS.gene058111 | MS.gene21868 | 0.93078 | 9.94E-94 | -1.69E-46 |
| MS.gene058117 | MS.gene21868 | 0.827998 | 1.15E-54 | -1.69E-46 |
| MS.gene058157 | MS.gene21868 | -0.80946 | 1.87E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene21868 | 0.910818 | 1.22E-82 | -1.69E-46 |
| MS.gene058173 | MS.gene21868 | 0.909626 | 4.62E-82 | -1.69E-46 |
| MS.gene058175 | MS.gene21868 | 0.913783 | 4.12E-84 | -1.69E-46 |
| MS.gene058179 | MS.gene21868 | 0.834262 | 3.32E-56 | -1.69E-46 |
| MS.gene058180 | MS.gene21868 | 0.838047 | 3.63E-57 | -1.69E-46 |
| MS.gene058268 | MS.gene21868 | 0.823456 | 1.37E-53 | -1.69E-46 |
| MS.gene058269 | MS.gene21868 | 0.812462 | 4.19E-51 | -1.69E-46 |
| MS.gene058493 | MS.gene21868 | 0.845402 | 4.15E-59 | -1.69E-46 |
| MS.gene058494 | MS.gene21868 | 0.835324 | 1.79E-56 | -1.69E-46 |
| MS.gene058603 | MS.gene21868 | 0.811367 | 7.26E-51 | -1.69E-46 |
| MS.gene058628 | MS.gene21868 | 0.800671 | 1.29E-48 | -1.69E-46 |
| MS.gene058840 | MS.gene21868 | 0.800463 | 1.42E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene21868 | -0.817417 | 3.33E-52 | -1.69E-46 |
| MS.gene059037 | MS.gene21868 | 0.848266 | 6.84E-60 | -1.69E-46 |
| MS.gene059038 | MS.gene21868 | 0.835836 | 1.33E-56 | -1.69E-46 |
| MS.gene059045 | MS.gene21868 | 0.874898 | 4.71E-68 | -1.69E-46 |
| MS.gene059223 | MS.gene21868 | 0.823735 | 1.18E-53 | -1.69E-46 |
| MS.gene059690 | MS.gene21868 | 0.820816 | 5.62E-53 | -1.69E-46 |
| MS.gene059694 | MS.gene21868 | 0.82184 | 3.26E-53 | -1.69E-46 |
| MS.gene059697 | MS.gene21868 | 0.82272 | 2.04E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene21868 | -0.832315 | 1.01E-55 | -1.69E-46 |
| MS.gene059953 | MS.gene21868 | 0.807413 | 5.12E-50 | -1.69E-46 |
| MS.gene059955 | MS.gene21868 | 0.808999 | 2.35E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene21868 | 0.810514 | 1.11E-50 | -1.69E-46 |
| MS.gene060778 | MS.gene21868 | -0.816564 | 5.18E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene21868 | -0.824825 | 6.54E-54 | -1.69E-46 |
| MS.gene061157 | MS.gene21868 | 0.803024 | 4.25E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21868.t1 | MTR_5g007713 | 98.715 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 0.0 | 802 |
| MS.gene21868.t1 | MTR_5g007717 | 98.458 | 389 | 6 | 0 | 1 | 389 | 1 | 389 | 0.0 | 800 |
| MS.gene21868.t1 | MTR_1g098140 | 96.658 | 389 | 13 | 0 | 1 | 389 | 1 | 389 | 0.0 | 785 |
| MS.gene21868.t1 | MTR_1g097935 | 96.401 | 389 | 14 | 0 | 1 | 389 | 1 | 389 | 0.0 | 783 |
| MS.gene21868.t1 | MTR_5g007730 | 95.887 | 389 | 16 | 0 | 1 | 389 | 1 | 389 | 0.0 | 782 |
| MS.gene21868.t1 | MTR_1g097910 | 96.144 | 389 | 15 | 0 | 1 | 389 | 1 | 389 | 0.0 | 782 |
| MS.gene21868.t1 | MTR_7g016700 | 96.144 | 389 | 15 | 0 | 1 | 389 | 1 | 389 | 0.0 | 781 |
| MS.gene21868.t1 | MTR_7g016800 | 95.887 | 389 | 16 | 0 | 1 | 389 | 1 | 389 | 0.0 | 780 |
| MS.gene21868.t1 | MTR_7g016720 | 96.144 | 389 | 15 | 0 | 1 | 389 | 1 | 389 | 0.0 | 780 |
| MS.gene21868.t1 | MTR_7g016820 | 95.887 | 389 | 16 | 0 | 1 | 389 | 1 | 389 | 0.0 | 779 |
| MS.gene21868.t1 | MTR_5g007760 | 95.887 | 389 | 16 | 0 | 1 | 389 | 1 | 389 | 0.0 | 778 |
| MS.gene21868.t1 | MTR_7g016780 | 95.630 | 389 | 17 | 0 | 1 | 389 | 1 | 389 | 0.0 | 776 |
| MS.gene21868.t1 | MTR_3g083920 | 90.979 | 388 | 35 | 0 | 1 | 388 | 1 | 388 | 0.0 | 754 |
| MS.gene21868.t1 | MTR_3g083910 | 89.948 | 388 | 39 | 0 | 1 | 388 | 1 | 388 | 0.0 | 748 |
| MS.gene21868.t1 | MTR_2g058470 | 87.404 | 389 | 49 | 0 | 1 | 389 | 1 | 389 | 0.0 | 719 |
| MS.gene21868.t1 | MTR_3g086260 | 82.474 | 388 | 68 | 0 | 1 | 388 | 1 | 388 | 0.0 | 691 |
| MS.gene21868.t1 | MTR_7g084300 | 80.620 | 387 | 75 | 0 | 1 | 387 | 1 | 387 | 0.0 | 676 |
| MS.gene21868.t1 | MTR_7g113405 | 94.719 | 303 | 16 | 0 | 87 | 389 | 1 | 303 | 0.0 | 595 |
| MS.gene21868.t1 | MTR_3g088675 | 66.324 | 389 | 131 | 0 | 1 | 389 | 1 | 389 | 0.0 | 581 |
| MS.gene21868.t1 | MTR_5g007740 | 80.061 | 326 | 65 | 0 | 64 | 389 | 1 | 326 | 0.0 | 553 |
| MS.gene21868.t1 | MTR_5g007723 | 68.766 | 397 | 75 | 5 | 12 | 389 | 32 | 398 | 0.0 | 536 |
| MS.gene21868.t1 | MTR_5g007770 | 78.333 | 300 | 32 | 2 | 70 | 369 | 1 | 267 | 1.63e-169 | 474 |
| MS.gene21868.t1 | MTR_3g088670 | 48.718 | 390 | 186 | 6 | 10 | 388 | 2 | 388 | 1.28e-129 | 378 |
| MS.gene21868.t1 | MTR_4g075560 | 41.579 | 380 | 215 | 4 | 11 | 387 | 13 | 388 | 8.63e-102 | 307 |
| MS.gene21868.t1 | MTR_4g078730 | 36.461 | 373 | 230 | 2 | 15 | 387 | 24 | 389 | 3.07e-91 | 280 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21868.t1 | AT5G13930 | 82.732 | 388 | 66 | 1 | 3 | 389 | 8 | 395 | 0.0 | 677 |
| MS.gene21868.t1 | AT4G34850 | 40.957 | 376 | 216 | 4 | 15 | 387 | 18 | 390 | 2.06e-96 | 293 |
| MS.gene21868.t1 | AT4G00040 | 38.520 | 392 | 229 | 6 | 1 | 387 | 1 | 385 | 1.23e-94 | 288 |
| MS.gene21868.t1 | AT1G02050 | 38.046 | 389 | 230 | 6 | 2 | 387 | 12 | 392 | 5.87e-86 | 266 |
| MS.gene21868.t1 | AT4G34850 | 40.752 | 319 | 184 | 3 | 72 | 387 | 1 | 317 | 3.59e-81 | 251 |
| MS.gene21868.t1 | AT3G52160 | 27.848 | 237 | 155 | 9 | 150 | 383 | 97 | 320 | 6.48e-12 | 66.6 |
| MS.gene21868.t1 | AT3G52160 | 27.848 | 237 | 155 | 9 | 150 | 383 | 210 | 433 | 1.24e-11 | 66.2 |
Find 106 sgRNAs with CRISPR-Local
Find 124 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATATAGGTTTCTCAATTTC+TGG | 0.117134 | 5.1:-2052941 | None:intergenic |
| CTTGTTGGTCAAGCACTCTT+TGG | 0.259826 | 5.1:+2052878 | MS.gene21868:CDS |
| GTTTCTCAATTTCTGGTATT+GGG | 0.265654 | 5.1:-2052934 | None:intergenic |
| CTGATTACAACTCAATCTTT+TGG | 0.271084 | 5.1:+2053131 | MS.gene21868:CDS |
| GGTTTCTCAATTTCTGGTAT+TGG | 0.273222 | 5.1:-2052935 | None:intergenic |
| AAGTGTGTAATCTTTGATTT+TGG | 0.277272 | 5.1:-2052611 | None:intergenic |
| CCTTCGTTTGGCCAAGGACT+TGG | 0.290850 | 5.1:+2052763 | MS.gene21868:CDS |
| AACCTATATTTGAGATGGTT+TGG | 0.308691 | 5.1:+2052954 | MS.gene21868:CDS |
| GCGAAAGAAATCGGCTCAAC+AGG | 0.312226 | 5.1:+2053300 | MS.gene21868:CDS |
| CCACAGGAGAAGGGCTTGAT+TGG | 0.325246 | 5.1:+2053332 | MS.gene21868:CDS |
| TTGTAATCAGATATGTTTAA+TGG | 0.325669 | 5.1:-2053118 | None:intergenic |
| AGAGAAGTACTTAGTGAATA+TGG | 0.329263 | 5.1:+2053235 | MS.gene21868:CDS |
| GATCAAGTTGAACAAAAGTT+AGG | 0.336805 | 5.1:+2053184 | MS.gene21868:CDS |
| TCTTTGAGCCTTGCGAATTT+CGG | 0.338160 | 5.1:-2052060 | None:intergenic |
| TACCAACAAGGGTGCTTTGC+AGG | 0.340912 | 5.1:+2052731 | MS.gene21868:CDS |
| TGGGGTGTGTTGTTCGGCTT+TGG | 0.357346 | 5.1:+2053352 | MS.gene21868:CDS |
| TACCAACTCACGAAACTCTT+AGG | 0.375304 | 5.1:+2052677 | MS.gene21868:CDS |
| TGAATACATGGCACCTTCAT+TGG | 0.375324 | 5.1:+2052505 | MS.gene21868:CDS |
| CACCTTCTTAAAGATGTTCC+TGG | 0.385004 | 5.1:+2053049 | MS.gene21868:CDS |
| CTTGATTGGGGTGTGTTGTT+CGG | 0.385641 | 5.1:+2053346 | MS.gene21868:CDS |
| GTGTTGTTCGGCTTTGGACC+TGG | 0.386498 | 5.1:+2053358 | MS.gene21868:CDS |
| CCAATGGCCATGATGGTTGC+AGG | 0.395368 | 5.1:-2052092 | None:intergenic |
| CACAGGAGAAGGGCTTGATT+GGG | 0.398609 | 5.1:+2053333 | MS.gene21868:CDS |
| ATCATATACCTCTTCACATA+TGG | 0.401250 | 5.1:-2052707 | None:intergenic |
| CATGTATCTTCTCTTGATCA+TGG | 0.401917 | 5.1:-2052441 | None:intergenic |
| GAGTTTCGTGAGTTGGTAAT+CGG | 0.407916 | 5.1:-2052672 | None:intergenic |
| AGGTGGGACGGTCCTTCGTT+TGG | 0.411263 | 5.1:+2052751 | MS.gene21868:CDS |
| GACCTAAGAGTTTCGTGAGT+TGG | 0.417759 | 5.1:-2052679 | None:intergenic |
| GGAGCTGCTGCGCTCATTGT+TGG | 0.424402 | 5.1:+2052905 | MS.gene21868:CDS |
| TCAATGGCTCCCTCACTGTC+TGG | 0.428576 | 5.1:-2052995 | None:intergenic |
| TCAAGAATTGCGGGTCCACC+TGG | 0.431851 | 5.1:-2053163 | None:intergenic |
| GTCCAAACCATCTCAAATAT+AGG | 0.437103 | 5.1:-2052956 | None:intergenic |
| GACTTGGCTGAGAACAATAA+AGG | 0.438047 | 5.1:+2052779 | MS.gene21868:CDS |
| ACTCATTTGGACAGTCTTGT+TGG | 0.445904 | 5.1:+2052863 | MS.gene21868:CDS |
| CATCTCATAGAGCCACACTA+TGG | 0.446315 | 5.1:-2053405 | None:intergenic |
| AGATGAGATGCGAAAGAAAT+CGG | 0.448207 | 5.1:+2053291 | MS.gene21868:CDS |
| ACCTTCATTGGATGCTAGGC+AGG | 0.450943 | 5.1:+2052517 | MS.gene21868:CDS |
| CAGTGAAGGCCATAAAAGAA+TGG | 0.456620 | 5.1:+2052582 | MS.gene21868:CDS |
| TTCACGAAGGTGACCGTCAA+TGG | 0.457763 | 5.1:-2053011 | None:intergenic |
| CACCTGCAAAGCACCCTTGT+TGG | 0.458609 | 5.1:-2052733 | None:intergenic |
| AATCAGATATGTTTAATGGT+TGG | 0.461034 | 5.1:-2053114 | None:intergenic |
| ATTGTTCTCAGCCAAGTCCT+TGG | 0.461734 | 5.1:-2052774 | None:intergenic |
| CTTTGTTCAACACAATTGGC+TGG | 0.464913 | 5.1:-2052125 | None:intergenic |
| TCAACTTGATCAAGAATTGC+GGG | 0.468071 | 5.1:-2053172 | None:intergenic |
| GCAGGACATGGTGGTGGTAG+AGG | 0.474656 | 5.1:+2052535 | MS.gene21868:CDS |
| AGTGAAGGCCATAAAAGAAT+GGG | 0.475863 | 5.1:+2052583 | MS.gene21868:CDS |
| ACCTTCTTAAAGATGTTCCT+GGG | 0.484500 | 5.1:+2053050 | MS.gene21868:CDS |
| ATGGAGAACAACAGTTTCAA+TGG | 0.487848 | 5.1:-2053386 | None:intergenic |
| GACGGTCACCTTCGTGAAGC+TGG | 0.488914 | 5.1:+2053016 | MS.gene21868:CDS |
| GACAGTGAGGGAGCCATTGA+CGG | 0.489536 | 5.1:+2052998 | MS.gene21868:CDS |
| TGGTCCTAGTGATACTCATT+TGG | 0.493191 | 5.1:+2052850 | MS.gene21868:CDS |
| TGTGCTTTGTTCAACACAAT+TGG | 0.494990 | 5.1:-2052129 | None:intergenic |
| GGACTTAAAACCACAGGAGA+AGG | 0.504968 | 5.1:+2053322 | MS.gene21868:CDS |
| TGAGAAACCTATATTTGAGA+TGG | 0.507221 | 5.1:+2052949 | MS.gene21868:CDS |
| TGCAGTGCCAATGGCCATGA+TGG | 0.507335 | 5.1:-2052099 | None:intergenic |
| CCTGCAACCATCATGGCCAT+TGG | 0.508648 | 5.1:+2052092 | MS.gene21868:CDS |
| TGGCACCTTCATTGGATGCT+AGG | 0.509747 | 5.1:+2052513 | MS.gene21868:CDS |
| GTGAGTTGGTAATCGGCGCC+AGG | 0.515174 | 5.1:-2052665 | None:intergenic |
| GACGGTCCTTCGTTTGGCCA+AGG | 0.515696 | 5.1:+2052757 | MS.gene21868:CDS |
| GGTCAAGCACTCTTTGGAGA+TGG | 0.517790 | 5.1:+2052884 | MS.gene21868:CDS |
| CATTGATAAAGCATTAATTG+AGG | 0.518210 | 5.1:+2053087 | MS.gene21868:CDS |
| CCAATCAAGCCCTTCTCCTG+TGG | 0.520229 | 5.1:-2053332 | None:intergenic |
| TCCAAGTGTATGTGAATACA+TGG | 0.525305 | 5.1:+2052493 | MS.gene21868:CDS |
| AGGAAAGGAGGCTGCAGTGA+AGG | 0.539707 | 5.1:+2052568 | MS.gene21868:CDS |
| ATGTTCTTTGAAACAATCCC+AGG | 0.542390 | 5.1:-2053067 | None:intergenic |
| GCCATGTATTCACATACACT+TGG | 0.545736 | 5.1:-2052494 | None:intergenic |
| AGAAGGCCCTGCAACCATCA+TGG | 0.546762 | 5.1:+2052085 | MS.gene21868:CDS |
| TCCCAGGAACATCTTTAAGA+AGG | 0.550142 | 5.1:-2053051 | None:intergenic |
| CGCAAGGCTCAAAGAGCAGA+AGG | 0.558731 | 5.1:+2052068 | MS.gene21868:CDS |
| TCCTGCCTAGCATCCAATGA+AGG | 0.559807 | 5.1:-2052518 | None:intergenic |
| CTGTCCAAATGAGTATCACT+AGG | 0.561644 | 5.1:-2052854 | None:intergenic |
| GCAGCCTCCTTTCCTAGTCT+AGG | 0.564443 | 5.1:-2052560 | None:intergenic |
| GGCTGGATTTGCAGTGCCAA+TGG | 0.564489 | 5.1:-2052108 | None:intergenic |
| TTCAACTTGATCAAGAATTG+CGG | 0.567995 | 5.1:-2053173 | None:intergenic |
| AGAGGTACCTAGACTAGGAA+AGG | 0.571613 | 5.1:+2052553 | MS.gene21868:CDS |
| TTCACTAAGTACTTCTCTAG+TGG | 0.572078 | 5.1:-2053230 | None:intergenic |
| TGCTAGGCAGGACATGGTGG+TGG | 0.573568 | 5.1:+2052529 | MS.gene21868:CDS |
| AACTGTTGTTCTCCATAGTG+TGG | 0.577442 | 5.1:+2053393 | MS.gene21868:CDS |
| CAATGGCCATGATGGTTGCA+GGG | 0.578454 | 5.1:-2052091 | None:intergenic |
| ATTGGATGCTAGGCAGGACA+TGG | 0.585693 | 5.1:+2052523 | MS.gene21868:CDS |
| CAACAAGGGTGCTTTGCAGG+TGG | 0.587645 | 5.1:+2052734 | MS.gene21868:CDS |
| ACAGTTTCAATGGTAAGTCC+AGG | 0.589843 | 5.1:-2053376 | None:intergenic |
| CAAGAATTGCGGGTCCACCT+GGG | 0.591037 | 5.1:-2053162 | None:intergenic |
| GACTTAAAACCACAGGAGAA+GGG | 0.599104 | 5.1:+2053323 | MS.gene21868:CDS |
| ACAAGTGGTGTAGACATGCC+TGG | 0.600112 | 5.1:+2052647 | MS.gene21868:CDS |
| AGGGTGCTTTGCAGGTGGGA+CGG | 0.601250 | 5.1:+2052739 | MS.gene21868:CDS |
| CAATAAAGGTGCTCGTGTGT+TGG | 0.608320 | 5.1:+2052793 | MS.gene21868:CDS |
| CGAAAGAAATCGGCTCAACA+GGG | 0.612402 | 5.1:+2053301 | MS.gene21868:CDS |
| AACAAGGGTGCTTTGCAGGT+GGG | 0.613935 | 5.1:+2052735 | MS.gene21868:CDS |
| GTCTTCGTCCATATGTGAAG+AGG | 0.616548 | 5.1:+2052699 | MS.gene21868:CDS |
| AGGCATGTCTACACCACTTG+TGG | 0.619163 | 5.1:-2052645 | None:intergenic |
| CAACAGGGACTTAAAACCAC+AGG | 0.620327 | 5.1:+2053316 | MS.gene21868:CDS |
| ACAGGAGAAGGGCTTGATTG+GGG | 0.623900 | 5.1:+2053334 | MS.gene21868:CDS |
| GTGGTAGAGGTACCTAGACT+AGG | 0.632093 | 5.1:+2052548 | MS.gene21868:CDS |
| AATGAGTATCACTAGGACCA+CGG | 0.635157 | 5.1:-2052847 | None:intergenic |
| GAGTGTATCCGAAATTCGCA+AGG | 0.640043 | 5.1:+2052052 | MS.gene21868:CDS |
| GGTACCTAGACTAGGAAAGG+AGG | 0.643500 | 5.1:+2052556 | MS.gene21868:CDS |
| AACGATTGCTCCAGACAGTG+AGG | 0.649845 | 5.1:+2052985 | MS.gene21868:CDS |
| GGTATATGATGTACCAACAA+GGG | 0.650513 | 5.1:+2052720 | MS.gene21868:CDS |
| GTTACTGCTGTGACATTCCG+TGG | 0.652143 | 5.1:+2052830 | MS.gene21868:CDS |
| CCAAGTCCTTGGCCAAACGA+AGG | 0.657493 | 5.1:-2052763 | None:intergenic |
| ACGATTGCTCCAGACAGTGA+GGG | 0.658063 | 5.1:+2052986 | MS.gene21868:CDS |
| GTGAAGGCCATAAAAGAATG+GGG | 0.663419 | 5.1:+2052584 | MS.gene21868:CDS |
| AGGTATATGATGTACCAACA+AGG | 0.664650 | 5.1:+2052719 | MS.gene21868:CDS |
| GGATGCTAGGCAGGACATGG+TGG | 0.681727 | 5.1:+2052526 | MS.gene21868:CDS |
| ATGTTAGACCAGCTTCACGA+AGG | 0.697645 | 5.1:-2053024 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACCAATCAAATAATAAT+AGG | - | chr5.1:2052362-2052381 | None:intergenic | 15.0% |
| !!! | ACATTAGTACAATTTTTTTT+GGG | - | chr5.1:2052392-2052411 | None:intergenic | 15.0% |
| !!! | TACATTAGTACAATTTTTTT+TGG | - | chr5.1:2052393-2052412 | None:intergenic | 15.0% |
| !!! | TATTATTATTTGATTGGTTT+TGG | + | chr5.1:2052361-2052380 | MS.gene21868:intron | 15.0% |
| !! | AAGACCTATTATTATTTGAT+TGG | + | chr5.1:2052355-2052374 | MS.gene21868:intron | 20.0% |
| !! | TTGTAATCAGATATGTTTAA+TGG | - | chr5.1:2053121-2053140 | None:intergenic | 20.0% |
| !!! | ATAGTTTGAAATAATTTGGT+TGG | - | chr5.1:2052326-2052345 | None:intergenic | 20.0% |
| !!! | ATTTTCTTTCAAAATCTCTT+CGG | - | chr5.1:2052474-2052493 | None:intergenic | 20.0% |
| !!! | GCAAATAGTTTGAAATAATT+TGG | - | chr5.1:2052330-2052349 | None:intergenic | 20.0% |
| ! | AATATAGGTTTCTCAATTTC+TGG | - | chr5.1:2052944-2052963 | None:intergenic | 25.0% |
| ! | AATCAGATATGTTTAATGGT+TGG | - | chr5.1:2053117-2053136 | None:intergenic | 25.0% |
| ! | GTAATTTCTTTAACTACTTC+AGG | + | chr5.1:2052410-2052429 | MS.gene21868:intron | 25.0% |
| !! | CATTGATAAAGCATTAATTG+AGG | + | chr5.1:2053087-2053106 | MS.gene21868:CDS | 25.0% |
| !! | TTGAAATTTTTCTTTGAGCT+CGG | - | chr5.1:2052198-2052217 | None:intergenic | 25.0% |
| !!! | AAGTGTGTAATCTTTGATTT+TGG | - | chr5.1:2052614-2052633 | None:intergenic | 25.0% |
| !!! | GTGATTTTAAAGTAGAAATC+AGG | - | chr5.1:2052158-2052177 | None:intergenic | 25.0% |
| ATCATATACCTCTTCACATA+TGG | - | chr5.1:2052710-2052729 | None:intergenic | 30.0% | |
| TGAGAAACCTATATTTGAGA+TGG | + | chr5.1:2052949-2052968 | MS.gene21868:CDS | 30.0% | |
| TTCAACTTGATCAAGAATTG+CGG | - | chr5.1:2053176-2053195 | None:intergenic | 30.0% | |
| ! | AACCTATATTTGAGATGGTT+TGG | + | chr5.1:2052954-2052973 | MS.gene21868:CDS | 30.0% |
| ! | CTGATTACAACTCAATCTTT+TGG | + | chr5.1:2053131-2053150 | MS.gene21868:CDS | 30.0% |
| !! | AGAGAAGTACTTAGTGAATA+TGG | + | chr5.1:2053235-2053254 | MS.gene21868:CDS | 30.0% |
| !! | GATCAAGTTGAACAAAAGTT+AGG | + | chr5.1:2053184-2053203 | MS.gene21868:CDS | 30.0% |
| !! | GTTTCTCAATTTCTGGTATT+GGG | - | chr5.1:2052937-2052956 | None:intergenic | 30.0% |
| ACCTTCTTAAAGATGTTCCT+GGG | + | chr5.1:2053050-2053069 | MS.gene21868:CDS | 35.0% | |
| AGATGAGATGCGAAAGAAAT+CGG | + | chr5.1:2053291-2053310 | MS.gene21868:CDS | 35.0% | |
| AGGTATATGATGTACCAACA+AGG | + | chr5.1:2052719-2052738 | MS.gene21868:CDS | 35.0% | |
| AGTGAAGGCCATAAAAGAAT+GGG | + | chr5.1:2052583-2052602 | MS.gene21868:CDS | 35.0% | |
| ATGGAGAACAACAGTTTCAA+TGG | - | chr5.1:2053389-2053408 | None:intergenic | 35.0% | |
| CATGTATCTTCTCTTGATCA+TGG | - | chr5.1:2052444-2052463 | None:intergenic | 35.0% | |
| GGTATATGATGTACCAACAA+GGG | + | chr5.1:2052720-2052739 | MS.gene21868:CDS | 35.0% | |
| GGTTGGCAAATTTCATATCA+CGG | - | chr5.1:2052309-2052328 | None:intergenic | 35.0% | |
| GTCCAAACCATCTCAAATAT+AGG | - | chr5.1:2052959-2052978 | None:intergenic | 35.0% | |
| GTTGGCAAATTTCATATCAC+GGG | - | chr5.1:2052308-2052327 | None:intergenic | 35.0% | |
| TCAACTTGATCAAGAATTGC+GGG | - | chr5.1:2053175-2053194 | None:intergenic | 35.0% | |
| TCCAAGTGTATGTGAATACA+TGG | + | chr5.1:2052493-2052512 | MS.gene21868:CDS | 35.0% | |
| TTCACTAAGTACTTCTCTAG+TGG | - | chr5.1:2053233-2053252 | None:intergenic | 35.0% | |
| ! | TGTGCTTTGTTCAACACAAT+TGG | - | chr5.1:2052132-2052151 | None:intergenic | 35.0% |
| ! | TTGATCTTTTGTACCACAAG+TGG | + | chr5.1:2052632-2052651 | MS.gene21868:CDS | 35.0% |
| !! | ATGTTCTTTGAAACAATCCC+AGG | - | chr5.1:2053070-2053089 | None:intergenic | 35.0% |
| !! | GGTTTCTCAATTTCTGGTAT+TGG | - | chr5.1:2052938-2052957 | None:intergenic | 35.0% |
| !! | GTGTAATCTTTGATTTTGGC+TGG | - | chr5.1:2052610-2052629 | None:intergenic | 35.0% |
| AACTGTTGTTCTCCATAGTG+TGG | + | chr5.1:2053393-2053412 | MS.gene21868:CDS | 40.0% | |
| AATGAGTATCACTAGGACCA+CGG | - | chr5.1:2052850-2052869 | None:intergenic | 40.0% | |
| ACAGTTTCAATGGTAAGTCC+AGG | - | chr5.1:2053379-2053398 | None:intergenic | 40.0% | |
| CACCTTCTTAAAGATGTTCC+TGG | + | chr5.1:2053049-2053068 | MS.gene21868:CDS | 40.0% | |
| CAGTGAAGGCCATAAAAGAA+TGG | + | chr5.1:2052582-2052601 | MS.gene21868:CDS | 40.0% | |
| CTGTCCAAATGAGTATCACT+AGG | - | chr5.1:2052857-2052876 | None:intergenic | 40.0% | |
| CTTTGTTCAACACAATTGGC+TGG | - | chr5.1:2052128-2052147 | None:intergenic | 40.0% | |
| GACTTAAAACCACAGGAGAA+GGG | + | chr5.1:2053323-2053342 | MS.gene21868:CDS | 40.0% | |
| GACTTGGCTGAGAACAATAA+AGG | + | chr5.1:2052779-2052798 | MS.gene21868:CDS | 40.0% | |
| GCCATGTATTCACATACACT+TGG | - | chr5.1:2052497-2052516 | None:intergenic | 40.0% | |
| GTGAAGGCCATAAAAGAATG+GGG | + | chr5.1:2052584-2052603 | MS.gene21868:CDS | 40.0% | |
| TACCAACTCACGAAACTCTT+AGG | + | chr5.1:2052677-2052696 | MS.gene21868:CDS | 40.0% | |
| TCTTTGAGCCTTGCGAATTT+CGG | - | chr5.1:2052063-2052082 | None:intergenic | 40.0% | |
| TGAATACATGGCACCTTCAT+TGG | + | chr5.1:2052505-2052524 | MS.gene21868:CDS | 40.0% | |
| TGGTCCTAGTGATACTCATT+TGG | + | chr5.1:2052850-2052869 | MS.gene21868:CDS | 40.0% | |
| ! | ACTCATTTGGACAGTCTTGT+TGG | + | chr5.1:2052863-2052882 | MS.gene21868:CDS | 40.0% |
| ! | CTAGTGGCTTTCATCTTTTC+AGG | - | chr5.1:2053217-2053236 | None:intergenic | 40.0% |
| ! | TCCCAGGAACATCTTTAAGA+AGG | - | chr5.1:2053054-2053073 | None:intergenic | 40.0% |
| !! | GAGTTTCGTGAGTTGGTAAT+CGG | - | chr5.1:2052675-2052694 | None:intergenic | 40.0% |
| ATGTTAGACCAGCTTCACGA+AGG | - | chr5.1:2053027-2053046 | None:intergenic | 45.0% | |
| ATTGTTCTCAGCCAAGTCCT+TGG | - | chr5.1:2052777-2052796 | None:intergenic | 45.0% | |
| CAACAGGGACTTAAAACCAC+AGG | + | chr5.1:2053316-2053335 | MS.gene21868:CDS | 45.0% | |
| CTTGTTGGTCAAGCACTCTT+TGG | + | chr5.1:2052878-2052897 | MS.gene21868:CDS | 45.0% | |
| GACCTAAGAGTTTCGTGAGT+TGG | - | chr5.1:2052682-2052701 | None:intergenic | 45.0% | |
| GAGTGTATCCGAAATTCGCA+AGG | + | chr5.1:2052052-2052071 | MS.gene21868:CDS | 45.0% | |
| GGACTTAAAACCACAGGAGA+AGG | + | chr5.1:2053322-2053341 | MS.gene21868:CDS | 45.0% | |
| GTCTTCGTCCATATGTGAAG+AGG | + | chr5.1:2052699-2052718 | MS.gene21868:CDS | 45.0% | |
| ! | ATCTTTTGGATTGCTCACCC+AGG | + | chr5.1:2053145-2053164 | MS.gene21868:CDS | 45.0% |
| ! | CGAAAGAAATCGGCTCAACA+GGG | + | chr5.1:2053301-2053320 | MS.gene21868:CDS | 45.0% |
| ! | CTTGATTGGGGTGTGTTGTT+CGG | + | chr5.1:2053346-2053365 | MS.gene21868:CDS | 45.0% |
| !! | AGAGGTACCTAGACTAGGAA+AGG | + | chr5.1:2052553-2052572 | MS.gene21868:CDS | 45.0% |
| !! | CAATAAAGGTGCTCGTGTGT+TGG | + | chr5.1:2052793-2052812 | MS.gene21868:CDS | 45.0% |
| AACGATTGCTCCAGACAGTG+AGG | + | chr5.1:2052985-2053004 | MS.gene21868:CDS | 50.0% | |
| ACAAGTGGTGTAGACATGCC+TGG | + | chr5.1:2052647-2052666 | MS.gene21868:CDS | 50.0% | |
| ACAGGAGAAGGGCTTGATTG+GGG | + | chr5.1:2053334-2053353 | MS.gene21868:CDS | 50.0% | |
| ACCTTCATTGGATGCTAGGC+AGG | + | chr5.1:2052517-2052536 | MS.gene21868:CDS | 50.0% | |
| ACGATTGCTCCAGACAGTGA+GGG | + | chr5.1:2052986-2053005 | MS.gene21868:CDS | 50.0% | |
| AGGCATGTCTACACCACTTG+TGG | - | chr5.1:2052648-2052667 | None:intergenic | 50.0% | |
| ATTGGATGCTAGGCAGGACA+TGG | + | chr5.1:2052523-2052542 | MS.gene21868:CDS | 50.0% | |
| CAATGGCCATGATGGTTGCA+GGG | - | chr5.1:2052094-2052113 | None:intergenic | 50.0% | |
| CACAGGAGAAGGGCTTGATT+GGG | + | chr5.1:2053333-2053352 | MS.gene21868:CDS | 50.0% | |
| GGTACCTAGACTAGGAAAGG+AGG | + | chr5.1:2052556-2052575 | MS.gene21868:CDS | 50.0% | |
| GTTACTGCTGTGACATTCCG+TGG | + | chr5.1:2052830-2052849 | MS.gene21868:CDS | 50.0% | |
| TCCTGCCTAGCATCCAATGA+AGG | - | chr5.1:2052521-2052540 | None:intergenic | 50.0% | |
| TGGCACCTTCATTGGATGCT+AGG | + | chr5.1:2052513-2052532 | MS.gene21868:CDS | 50.0% | |
| TTCACGAAGGTGACCGTCAA+TGG | - | chr5.1:2053014-2053033 | None:intergenic | 50.0% | |
| ! | GCGAAAGAAATCGGCTCAAC+AGG | + | chr5.1:2053300-2053319 | MS.gene21868:CDS | 50.0% |
| ! | GGTCAAGCACTCTTTGGAGA+TGG | + | chr5.1:2052884-2052903 | MS.gene21868:CDS | 50.0% |
| ! | TTTTGGATTGCTCACCCAGG+TGG | + | chr5.1:2053148-2053167 | MS.gene21868:CDS | 50.0% |
| !! | AACAAGGGTGCTTTGCAGGT+GGG | + | chr5.1:2052735-2052754 | MS.gene21868:CDS | 50.0% |
| !! | GTGGTAGAGGTACCTAGACT+AGG | + | chr5.1:2052548-2052567 | MS.gene21868:CDS | 50.0% |
| !! | TACCAACAAGGGTGCTTTGC+AGG | + | chr5.1:2052731-2052750 | MS.gene21868:CDS | 50.0% |
| !! | TGGCTGGCCCCATTCTTTTA+TGG | - | chr5.1:2052594-2052613 | None:intergenic | 50.0% |
| AGAAGGCCCTGCAACCATCA+TGG | + | chr5.1:2052085-2052104 | MS.gene21868:CDS | 55.0% | |
| AGGAAAGGAGGCTGCAGTGA+AGG | + | chr5.1:2052568-2052587 | MS.gene21868:CDS | 55.0% | |
| CAAGAATTGCGGGTCCACCT+GGG | - | chr5.1:2053165-2053184 | None:intergenic | 55.0% | |
| CCAAGTCCTTGGCCAAACGA+AGG | - | chr5.1:2052766-2052785 | None:intergenic | 55.0% | |
| CCAATCAAGCCCTTCTCCTG+TGG | - | chr5.1:2053335-2053354 | None:intergenic | 55.0% | |
| CCAATGGCCATGATGGTTGC+AGG | - | chr5.1:2052095-2052114 | None:intergenic | 55.0% | |
| CCACAGGAGAAGGGCTTGAT+TGG | + | chr5.1:2053332-2053351 | MS.gene21868:CDS | 55.0% | |
| CCTGCAACCATCATGGCCAT+TGG | + | chr5.1:2052092-2052111 | MS.gene21868:CDS | 55.0% | |
| CCTTCGTTTGGCCAAGGACT+TGG | + | chr5.1:2052763-2052782 | MS.gene21868:CDS | 55.0% | |
| CGCAAGGCTCAAAGAGCAGA+AGG | + | chr5.1:2052068-2052087 | MS.gene21868:CDS | 55.0% | |
| GACAGTGAGGGAGCCATTGA+CGG | + | chr5.1:2052998-2053017 | MS.gene21868:CDS | 55.0% | |
| GCAGCCTCCTTTCCTAGTCT+AGG | - | chr5.1:2052563-2052582 | None:intergenic | 55.0% | |
| GGCTGGATTTGCAGTGCCAA+TGG | - | chr5.1:2052111-2052130 | None:intergenic | 55.0% | |
| TCAAGAATTGCGGGTCCACC+TGG | - | chr5.1:2053166-2053185 | None:intergenic | 55.0% | |
| TCAATGGCTCCCTCACTGTC+TGG | - | chr5.1:2052998-2053017 | None:intergenic | 55.0% | |
| TGCAGTGCCAATGGCCATGA+TGG | - | chr5.1:2052102-2052121 | None:intergenic | 55.0% | |
| ! | CACCTGCAAAGCACCCTTGT+TGG | - | chr5.1:2052736-2052755 | None:intergenic | 55.0% |
| ! | TGGGGTGTGTTGTTCGGCTT+TGG | + | chr5.1:2053352-2053371 | MS.gene21868:CDS | 55.0% |
| !! | CAACAAGGGTGCTTTGCAGG+TGG | + | chr5.1:2052734-2052753 | MS.gene21868:CDS | 55.0% |
| !! | GTGTTGTTCGGCTTTGGACC+TGG | + | chr5.1:2053358-2053377 | MS.gene21868:CDS | 55.0% |
| AGGTGGGACGGTCCTTCGTT+TGG | + | chr5.1:2052751-2052770 | MS.gene21868:CDS | 60.0% | |
| GACGGTCACCTTCGTGAAGC+TGG | + | chr5.1:2053016-2053035 | MS.gene21868:CDS | 60.0% | |
| GACGGTCCTTCGTTTGGCCA+AGG | + | chr5.1:2052757-2052776 | MS.gene21868:CDS | 60.0% | |
| GGAGCTGCTGCGCTCATTGT+TGG | + | chr5.1:2052905-2052924 | MS.gene21868:CDS | 60.0% | |
| GGATGCTAGGCAGGACATGG+TGG | + | chr5.1:2052526-2052545 | MS.gene21868:CDS | 60.0% | |
| TGCTAGGCAGGACATGGTGG+TGG | + | chr5.1:2052529-2052548 | MS.gene21868:CDS | 60.0% | |
| ! | AGGGTGCTTTGCAGGTGGGA+CGG | + | chr5.1:2052739-2052758 | MS.gene21868:CDS | 60.0% |
| !! | GCAGGACATGGTGGTGGTAG+AGG | + | chr5.1:2052535-2052554 | MS.gene21868:CDS | 60.0% |
| !! | GTGAGTTGGTAATCGGCGCC+AGG | - | chr5.1:2052668-2052687 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 2052047 | 2053423 | 2052047 | ID=MS.gene21868 |
| chr5.1 | mRNA | 2052047 | 2053423 | 2052047 | ID=MS.gene21868.t1;Parent=MS.gene21868 |
| chr5.1 | exon | 2052047 | 2052224 | 2052047 | ID=MS.gene21868.t1.exon1;Parent=MS.gene21868.t1 |
| chr5.1 | CDS | 2052047 | 2052224 | 2052047 | ID=cds.MS.gene21868.t1;Parent=MS.gene21868.t1 |
| chr5.1 | exon | 2052432 | 2053423 | 2052432 | ID=MS.gene21868.t1.exon2;Parent=MS.gene21868.t1 |
| chr5.1 | CDS | 2052432 | 2053423 | 2052432 | ID=cds.MS.gene21868.t1;Parent=MS.gene21868.t1 |
| Gene Sequence |
| Protein sequence |
