Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073868.t1 | GAU25277.1 | 97.1 | 204 | 6 | 0 | 1 | 204 | 115 | 318 | 8.90E-77 | 296.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073868.t1 | Q8GWQ2 | 65.7 | 207 | 44 | 4 | 1 | 204 | 99 | 281 | 1.8e-54 | 213.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073868.t1 | A0A2Z6N7P0 | 97.1 | 204 | 6 | 0 | 1 | 204 | 115 | 318 | 6.4e-77 | 296.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene073868 | -0.810409 | 1.17E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene073868 | -0.802967 | 4.36E-49 | -1.69E-46 |
| MS.gene049232 | MS.gene073868 | -0.820813 | 5.63E-53 | -1.69E-46 |
| MS.gene049259 | MS.gene073868 | 0.838907 | 2.18E-57 | -1.69E-46 |
| MS.gene049281 | MS.gene073868 | 0.851016 | 1.17E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene073868 | -0.805699 | 1.18E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene073868 | -0.837511 | 4.98E-57 | -1.69E-46 |
| MS.gene049483 | MS.gene073868 | 0.834645 | 2.66E-56 | -1.69E-46 |
| MS.gene049549 | MS.gene073868 | 0.833645 | 4.74E-56 | -1.69E-46 |
| MS.gene049611 | MS.gene073868 | 0.845376 | 4.22E-59 | -1.69E-46 |
| MS.gene049634 | MS.gene073868 | 0.838909 | 2.17E-57 | -1.69E-46 |
| MS.gene050082 | MS.gene073868 | 0.808924 | 2.44E-50 | -1.69E-46 |
| MS.gene050095 | MS.gene073868 | 0.803765 | 2.98E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene073868 | -0.826742 | 2.30E-54 | -1.69E-46 |
| MS.gene050170 | MS.gene073868 | -0.832772 | 7.81E-56 | -1.69E-46 |
| MS.gene050216 | MS.gene073868 | -0.828153 | 1.05E-54 | -1.69E-46 |
| MS.gene050323 | MS.gene073868 | -0.820785 | 5.71E-53 | -1.69E-46 |
| MS.gene050380 | MS.gene073868 | 0.800841 | 1.19E-48 | -1.69E-46 |
| MS.gene050381 | MS.gene073868 | 0.890251 | 1.17E-73 | -1.69E-46 |
| MS.gene050496 | MS.gene073868 | -0.854909 | 8.99E-62 | -1.69E-46 |
| MS.gene050502 | MS.gene073868 | -0.80464 | 1.96E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene073868 | -0.846114 | 2.66E-59 | -1.69E-46 |
| MS.gene050577 | MS.gene073868 | -0.805748 | 1.15E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene073868 | -0.846262 | 2.43E-59 | -1.69E-46 |
| MS.gene050647 | MS.gene073868 | 0.815517 | 8.88E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene073868 | -0.824675 | 7.10E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene073868 | -0.817415 | 3.34E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene073868 | -0.804899 | 1.73E-49 | -1.69E-46 |
| MS.gene05079 | MS.gene073868 | 0.802449 | 5.58E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene073868 | -0.846928 | 1.60E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene073868 | -0.847815 | 9.10E-60 | -1.69E-46 |
| MS.gene050883 | MS.gene073868 | 0.865358 | 6.26E-65 | -1.69E-46 |
| MS.gene050986 | MS.gene073868 | -0.819455 | 1.15E-52 | -1.69E-46 |
| MS.gene051044 | MS.gene073868 | 0.833805 | 4.32E-56 | -1.69E-46 |
| MS.gene05104 | MS.gene073868 | 0.840061 | 1.09E-57 | -1.69E-46 |
| MS.gene051127 | MS.gene073868 | 0.888919 | 3.85E-73 | -1.69E-46 |
| MS.gene051138 | MS.gene073868 | 0.850524 | 1.61E-60 | -1.69E-46 |
| MS.gene051268 | MS.gene073868 | -0.807563 | 4.75E-50 | -1.69E-46 |
| MS.gene051364 | MS.gene073868 | 0.86127 | 1.15E-63 | -1.69E-46 |
| MS.gene051366 | MS.gene073868 | 0.853887 | 1.77E-61 | -1.69E-46 |
| MS.gene051367 | MS.gene073868 | 0.83823 | 3.25E-57 | -1.69E-46 |
| MS.gene05141 | MS.gene073868 | 0.807468 | 4.98E-50 | -1.69E-46 |
| MS.gene051422 | MS.gene073868 | 0.809149 | 2.18E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene073868 | -0.801079 | 1.07E-48 | -1.69E-46 |
| MS.gene051632 | MS.gene073868 | 0.818745 | 1.67E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene073868 | 0.806248 | 9.02E-50 | -1.69E-46 |
| MS.gene051858 | MS.gene073868 | -0.801937 | 7.11E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene073868 | -0.81431 | 1.64E-51 | -1.69E-46 |
| MS.gene051946 | MS.gene073868 | 0.834995 | 2.17E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene073868 | -0.814728 | 1.33E-51 | -1.69E-46 |
| MS.gene052211 | MS.gene073868 | 0.847722 | 9.66E-60 | -1.69E-46 |
| MS.gene052212 | MS.gene073868 | 0.803868 | 2.84E-49 | -1.69E-46 |
| MS.gene05234 | MS.gene073868 | 0.801719 | 7.88E-49 | -1.69E-46 |
| MS.gene05240 | MS.gene073868 | 0.807788 | 4.26E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene073868 | -0.831747 | 1.40E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene073868 | -0.837663 | 4.55E-57 | -1.69E-46 |
| MS.gene052606 | MS.gene073868 | 0.805595 | 1.24E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene073868 | -0.800679 | 1.29E-48 | -1.69E-46 |
| MS.gene053031 | MS.gene073868 | 0.801247 | 9.85E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene073868 | -0.823197 | 1.58E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene073868 | 0.916535 | 1.58E-85 | -1.69E-46 |
| MS.gene053479 | MS.gene073868 | -0.813539 | 2.43E-51 | -1.69E-46 |
| MS.gene053488 | MS.gene073868 | 0.835043 | 2.11E-56 | -1.69E-46 |
| MS.gene053549 | MS.gene073868 | 0.81691 | 4.33E-52 | -1.69E-46 |
| MS.gene053561 | MS.gene073868 | 0.845629 | 3.60E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene073868 | -0.805613 | 1.23E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene073868 | 0.816947 | 4.25E-52 | -1.69E-46 |
| MS.gene053887 | MS.gene073868 | 0.843573 | 1.29E-58 | -1.69E-46 |
| MS.gene054054 | MS.gene073868 | 0.813173 | 2.93E-51 | -1.69E-46 |
| MS.gene054056 | MS.gene073868 | 0.82888 | 7.03E-55 | -1.69E-46 |
| MS.gene054146 | MS.gene073868 | 0.821487 | 3.93E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene073868 | -0.816846 | 4.48E-52 | -1.69E-46 |
| MS.gene054616 | MS.gene073868 | 0.827228 | 1.76E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene073868 | -0.800284 | 1.55E-48 | -1.69E-46 |
| MS.gene054706 | MS.gene073868 | 0.839085 | 1.96E-57 | -1.69E-46 |
| MS.gene054707 | MS.gene073868 | 0.839556 | 1.48E-57 | -1.69E-46 |
| MS.gene054708 | MS.gene073868 | 0.865017 | 8.01E-65 | -1.69E-46 |
| MS.gene05470 | MS.gene073868 | -0.823664 | 1.23E-53 | -1.69E-46 |
| MS.gene05483 | MS.gene073868 | 0.801727 | 7.85E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene073868 | -0.820002 | 8.63E-53 | -1.69E-46 |
| MS.gene054959 | MS.gene073868 | 0.819526 | 1.11E-52 | -1.69E-46 |
| MS.gene055124 | MS.gene073868 | 0.872841 | 2.33E-67 | -1.69E-46 |
| MS.gene055139 | MS.gene073868 | 0.830444 | 2.93E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene073868 | 0.889461 | 2.37E-73 | -1.69E-46 |
| MS.gene055202 | MS.gene073868 | 0.872143 | 3.99E-67 | -1.69E-46 |
| MS.gene055362 | MS.gene073868 | -0.826842 | 2.17E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene073868 | -0.832492 | 9.17E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene073868 | -0.82816 | 1.05E-54 | -1.69E-46 |
| MS.gene055750 | MS.gene073868 | -0.810608 | 1.06E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene073868 | -0.802666 | 5.03E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene073868 | -0.853444 | 2.38E-61 | -1.69E-46 |
| MS.gene055942 | MS.gene073868 | 0.822971 | 1.78E-53 | -1.69E-46 |
| MS.gene056218 | MS.gene073868 | 0.811165 | 8.02E-51 | -1.69E-46 |
| MS.gene056224 | MS.gene073868 | 0.82988 | 4.02E-55 | -1.69E-46 |
| MS.gene056298 | MS.gene073868 | 0.814289 | 1.66E-51 | -1.69E-46 |
| MS.gene056310 | MS.gene073868 | 0.839349 | 1.67E-57 | -1.69E-46 |
| MS.gene056311 | MS.gene073868 | 0.851738 | 7.30E-61 | -1.69E-46 |
| MS.gene056313 | MS.gene073868 | 0.836879 | 7.22E-57 | -1.69E-46 |
| MS.gene056504 | MS.gene073868 | -0.865126 | 7.40E-65 | -1.69E-46 |
| MS.gene056657 | MS.gene073868 | -0.810946 | 8.95E-51 | -1.69E-46 |
| MS.gene056748 | MS.gene073868 | 0.815385 | 9.50E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene073868 | 0.833234 | 6.00E-56 | -1.69E-46 |
| MS.gene057014 | MS.gene073868 | 0.830903 | 2.26E-55 | -1.69E-46 |
| MS.gene057086 | MS.gene073868 | -0.811299 | 7.50E-51 | -1.69E-46 |
| MS.gene057261 | MS.gene073868 | 0.809126 | 2.21E-50 | -1.69E-46 |
| MS.gene057473 | MS.gene073868 | 0.834391 | 3.08E-56 | -1.69E-46 |
| MS.gene057499 | MS.gene073868 | 0.828493 | 8.72E-55 | -1.69E-46 |
| MS.gene057547 | MS.gene073868 | 0.805443 | 1.33E-49 | -1.69E-46 |
| MS.gene057549 | MS.gene073868 | 0.815785 | 7.74E-52 | -1.69E-46 |
| MS.gene057768 | MS.gene073868 | 0.819903 | 9.09E-53 | -1.69E-46 |
| MS.gene058068 | MS.gene073868 | 0.845403 | 4.15E-59 | -1.69E-46 |
| MS.gene058093 | MS.gene073868 | 0.822805 | 1.95E-53 | -1.69E-46 |
| MS.gene058099 | MS.gene073868 | 0.865938 | 4.10E-65 | -1.69E-46 |
| MS.gene058108 | MS.gene073868 | 0.843636 | 1.24E-58 | -1.69E-46 |
| MS.gene058109 | MS.gene073868 | 0.85969 | 3.47E-63 | -1.69E-46 |
| MS.gene058111 | MS.gene073868 | 0.857553 | 1.51E-62 | -1.69E-46 |
| MS.gene058117 | MS.gene073868 | 0.82771 | 1.35E-54 | -1.69E-46 |
| MS.gene058157 | MS.gene073868 | -0.830155 | 3.44E-55 | -1.69E-46 |
| MS.gene058171 | MS.gene073868 | 0.882105 | 1.38E-70 | -1.69E-46 |
| MS.gene058173 | MS.gene073868 | 0.869918 | 2.16E-66 | -1.69E-46 |
| MS.gene058175 | MS.gene073868 | 0.880409 | 5.62E-70 | -1.69E-46 |
| MS.gene058268 | MS.gene073868 | 0.854383 | 1.28E-61 | -1.69E-46 |
| MS.gene058269 | MS.gene073868 | 0.848567 | 5.65E-60 | -1.69E-46 |
| MS.gene058334 | MS.gene073868 | 0.816774 | 4.65E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene073868 | -0.845647 | 3.56E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene073868 | -0.819019 | 1.45E-52 | -1.69E-46 |
| MS.gene058493 | MS.gene073868 | 0.85662 | 2.84E-62 | -1.69E-46 |
| MS.gene058494 | MS.gene073868 | 0.834688 | 2.59E-56 | -1.69E-46 |
| MS.gene058496 | MS.gene073868 | 0.80345 | 3.47E-49 | -1.69E-46 |
| MS.gene058603 | MS.gene073868 | 0.838074 | 3.57E-57 | -1.69E-46 |
| MS.gene058628 | MS.gene073868 | 0.811537 | 6.66E-51 | -1.69E-46 |
| MS.gene058629 | MS.gene073868 | 0.809797 | 1.58E-50 | -1.69E-46 |
| MS.gene058630 | MS.gene073868 | 0.813574 | 2.39E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene073868 | -0.814866 | 1.24E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene073868 | 0.802859 | 4.59E-49 | -1.69E-46 |
| MS.gene058978 | MS.gene073868 | 0.801436 | 9.01E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene073868 | -0.850568 | 1.56E-60 | -1.69E-46 |
| MS.gene059023 | MS.gene073868 | -0.809875 | 1.52E-50 | -1.69E-46 |
| MS.gene059037 | MS.gene073868 | 0.811885 | 5.60E-51 | -1.69E-46 |
| MS.gene059045 | MS.gene073868 | 0.85865 | 7.12E-63 | -1.69E-46 |
| MS.gene059223 | MS.gene073868 | 0.822793 | 1.96E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene073868 | -0.800113 | 1.68E-48 | -1.69E-46 |
| MS.gene059677 | MS.gene073868 | -0.818994 | 1.47E-52 | -1.69E-46 |
| MS.gene059694 | MS.gene073868 | 0.805639 | 1.21E-49 | -1.69E-46 |
| MS.gene059697 | MS.gene073868 | 0.803818 | 2.91E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene073868 | -0.856979 | 2.23E-62 | -1.69E-46 |
| MS.gene059902 | MS.gene073868 | -0.804691 | 1.91E-49 | -1.69E-46 |
| MS.gene059916 | MS.gene073868 | 0.836914 | 7.08E-57 | -1.69E-46 |
| MS.gene059953 | MS.gene073868 | 0.823691 | 1.21E-53 | -1.69E-46 |
| MS.gene059955 | MS.gene073868 | 0.833497 | 5.16E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene073868 | -0.821302 | 4.34E-53 | -1.69E-46 |
| MS.gene060187 | MS.gene073868 | 0.810704 | 1.01E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene073868 | -0.821144 | 4.72E-53 | -1.69E-46 |
| MS.gene060593 | MS.gene073868 | 0.84328 | 1.54E-58 | -1.69E-46 |
| MS.gene060595 | MS.gene073868 | 0.869157 | 3.82E-66 | -1.69E-46 |
| MS.gene060703 | MS.gene073868 | -0.813681 | 2.26E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene073868 | -0.819225 | 1.30E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene073868 | -0.845794 | 3.25E-59 | -1.69E-46 |
| MS.gene06077 | MS.gene073868 | -0.860482 | 2.00E-63 | -1.69E-46 |
| MS.gene060823 | MS.gene073868 | 0.81103 | 8.59E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene073868 | -0.834586 | 2.75E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073868.t1 | MTR_1g044155 | 96.585 | 205 | 3 | 3 | 1 | 204 | 158 | 359 | 4.25e-129 | 367 |
| MS.gene073868.t1 | MTR_3g068035 | 64.322 | 199 | 61 | 4 | 1 | 196 | 111 | 302 | 8.21e-66 | 205 |
| MS.gene073868.t1 | MTR_1g073860 | 68.720 | 211 | 45 | 6 | 1 | 204 | 126 | 322 | 1.31e-65 | 205 |
| MS.gene073868.t1 | MTR_1g079810 | 55.093 | 216 | 69 | 7 | 1 | 204 | 106 | 305 | 3.00e-56 | 180 |
| MS.gene073868.t1 | MTR_7g080980 | 59.278 | 194 | 56 | 3 | 1 | 191 | 89 | 262 | 8.50e-53 | 170 |
| MS.gene073868.t1 | MTR_5g091630 | 52.551 | 196 | 64 | 6 | 1 | 196 | 79 | 245 | 1.56e-48 | 159 |
| MS.gene073868.t1 | MTR_4g098450 | 73.770 | 122 | 32 | 0 | 1 | 122 | 108 | 229 | 2.69e-48 | 159 |
| MS.gene073868.t1 | MTR_5g011520 | 74.590 | 122 | 31 | 0 | 1 | 122 | 132 | 253 | 1.27e-45 | 154 |
| MS.gene073868.t1 | MTR_8g036060 | 55.122 | 205 | 77 | 5 | 1 | 204 | 118 | 308 | 2.21e-45 | 152 |
| MS.gene073868.t1 | MTR_5g080580 | 72.034 | 118 | 33 | 0 | 1 | 118 | 121 | 238 | 2.81e-45 | 153 |
| MS.gene073868.t1 | MTR_3g100470 | 54.422 | 147 | 55 | 4 | 1 | 143 | 106 | 244 | 9.09e-43 | 145 |
| MS.gene073868.t1 | MTR_5g066020 | 46.199 | 171 | 73 | 4 | 1 | 168 | 85 | 239 | 2.60e-42 | 143 |
| MS.gene073868.t1 | MTR_1g073870 | 58.716 | 109 | 30 | 3 | 10 | 118 | 61 | 154 | 6.96e-25 | 97.4 |
| MS.gene073868.t1 | MTR_1g079780 | 43.636 | 110 | 61 | 1 | 1 | 109 | 114 | 223 | 7.27e-24 | 96.7 |
| MS.gene073868.t1 | MTR_7g116320 | 40.000 | 130 | 70 | 1 | 1 | 130 | 148 | 269 | 1.89e-20 | 88.2 |
| MS.gene073868.t1 | MTR_5g010330 | 39.200 | 125 | 66 | 4 | 8 | 123 | 146 | 269 | 5.25e-20 | 86.3 |
| MS.gene073868.t1 | MTR_7g116320 | 43.220 | 118 | 63 | 1 | 1 | 114 | 148 | 265 | 1.41e-19 | 84.3 |
| MS.gene073868.t1 | MTR_1g061530 | 37.903 | 124 | 73 | 2 | 1 | 120 | 146 | 269 | 1.71e-18 | 82.4 |
| MS.gene073868.t1 | MTR_6g061670 | 38.739 | 111 | 65 | 1 | 1 | 108 | 130 | 240 | 3.41e-18 | 81.3 |
| MS.gene073868.t1 | MTR_6g061670 | 38.739 | 111 | 65 | 1 | 1 | 108 | 135 | 245 | 3.49e-18 | 81.3 |
| MS.gene073868.t1 | MTR_8g098390 | 36.111 | 144 | 73 | 4 | 6 | 146 | 176 | 303 | 2.60e-17 | 79.0 |
| MS.gene073868.t1 | MTR_1g076710 | 41.441 | 111 | 61 | 2 | 1 | 108 | 139 | 248 | 5.52e-17 | 78.2 |
| MS.gene073868.t1 | MTR_8g036160 | 43.750 | 112 | 59 | 1 | 1 | 108 | 147 | 258 | 6.65e-17 | 78.2 |
| MS.gene073868.t1 | MTR_8g078930 | 33.557 | 149 | 81 | 4 | 1 | 132 | 6 | 153 | 1.14e-16 | 74.3 |
| MS.gene073868.t1 | MTR_7g077120 | 35.762 | 151 | 92 | 2 | 1 | 146 | 162 | 312 | 1.12e-15 | 74.3 |
| MS.gene073868.t1 | MTR_4g098460 | 40.179 | 112 | 57 | 3 | 3 | 108 | 88 | 195 | 1.34e-15 | 73.6 |
| MS.gene073868.t1 | MTR_5g089600 | 30.709 | 127 | 77 | 3 | 1 | 116 | 109 | 235 | 2.40e-15 | 72.4 |
| MS.gene073868.t1 | MTR_4g055813 | 33.117 | 154 | 98 | 4 | 3 | 153 | 26 | 177 | 5.67e-15 | 72.0 |
| MS.gene073868.t1 | MTR_5g011610 | 33.600 | 125 | 79 | 3 | 1 | 124 | 63 | 184 | 5.69e-15 | 72.4 |
| MS.gene073868.t1 | MTR_6g060670 | 42.991 | 107 | 59 | 2 | 3 | 109 | 184 | 288 | 8.61e-15 | 71.6 |
| MS.gene073868.t1 | MTR_7g074935 | 41.441 | 111 | 62 | 1 | 1 | 108 | 132 | 242 | 8.93e-15 | 72.0 |
| MS.gene073868.t1 | MTR_5g011620 | 33.871 | 124 | 78 | 3 | 1 | 122 | 120 | 241 | 1.02e-14 | 72.4 |
| MS.gene073868.t1 | MTR_4g098460 | 39.655 | 116 | 57 | 3 | 3 | 108 | 88 | 200 | 2.51e-14 | 70.1 |
| MS.gene073868.t1 | MTR_5g011680 | 32.031 | 128 | 79 | 3 | 3 | 122 | 149 | 276 | 3.50e-14 | 69.7 |
| MS.gene073868.t1 | MTR_1g053685 | 30.818 | 159 | 95 | 3 | 1 | 144 | 117 | 275 | 1.68e-13 | 67.8 |
| MS.gene073868.t1 | MTR_4g055833 | 36.885 | 122 | 71 | 3 | 1 | 116 | 127 | 248 | 1.34e-12 | 65.9 |
| MS.gene073868.t1 | MTR_4g101990 | 39.062 | 128 | 73 | 2 | 1 | 123 | 149 | 276 | 1.52e-12 | 65.5 |
| MS.gene073868.t1 | MTR_4g055803 | 31.210 | 157 | 101 | 4 | 3 | 153 | 132 | 287 | 1.81e-12 | 65.5 |
| MS.gene073868.t1 | MTR_4g057487 | 26.064 | 188 | 115 | 4 | 1 | 173 | 49 | 227 | 1.82e-12 | 64.3 |
| MS.gene073868.t1 | MTR_8g031100 | 36.184 | 152 | 90 | 3 | 1 | 145 | 160 | 311 | 3.38e-12 | 64.7 |
| MS.gene073868.t1 | MTR_1g032910 | 30.952 | 126 | 77 | 1 | 1 | 116 | 135 | 260 | 3.23e-11 | 61.6 |
| MS.gene073868.t1 | MTR_4g057525 | 30.159 | 126 | 78 | 2 | 1 | 116 | 68 | 193 | 8.85e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073868.t1 | AT4G14465 | 65.217 | 207 | 45 | 6 | 1 | 204 | 99 | 281 | 1.33e-70 | 216 |
| MS.gene073868.t1 | AT4G17800 | 57.297 | 185 | 55 | 2 | 1 | 185 | 114 | 274 | 3.75e-48 | 159 |
| MS.gene073868.t1 | AT2G35270 | 53.297 | 182 | 59 | 2 | 1 | 182 | 110 | 265 | 2.55e-47 | 157 |
| MS.gene073868.t1 | AT3G55560 | 52.284 | 197 | 76 | 3 | 1 | 196 | 120 | 299 | 2.68e-47 | 157 |
| MS.gene073868.t1 | AT3G04570 | 73.016 | 126 | 26 | 1 | 1 | 118 | 112 | 237 | 7.48e-47 | 156 |
| MS.gene073868.t1 | AT2G42940 | 63.934 | 122 | 44 | 0 | 1 | 122 | 85 | 206 | 2.50e-45 | 151 |
| MS.gene073868.t1 | AT5G49700 | 51.136 | 176 | 73 | 5 | 1 | 167 | 88 | 259 | 7.62e-45 | 150 |
| MS.gene073868.t1 | AT2G45430 | 55.000 | 200 | 76 | 7 | 1 | 196 | 121 | 310 | 4.64e-44 | 149 |
| MS.gene073868.t1 | AT1G76500 | 63.566 | 129 | 38 | 1 | 1 | 120 | 104 | 232 | 9.23e-44 | 148 |
| MS.gene073868.t1 | AT3G60870 | 69.912 | 113 | 32 | 1 | 1 | 113 | 91 | 201 | 9.51e-44 | 147 |
| MS.gene073868.t1 | AT4G22810 | 57.212 | 208 | 65 | 7 | 1 | 204 | 137 | 324 | 1.68e-43 | 148 |
| MS.gene073868.t1 | AT4G12050 | 73.171 | 123 | 32 | 1 | 1 | 122 | 150 | 272 | 6.20e-43 | 147 |
| MS.gene073868.t1 | AT1G14490 | 48.684 | 152 | 70 | 3 | 1 | 144 | 35 | 186 | 3.38e-34 | 121 |
| MS.gene073868.t1 | AT1G14490 | 48.684 | 152 | 70 | 3 | 1 | 144 | 54 | 205 | 4.32e-34 | 121 |
| MS.gene073868.t1 | AT4G35390 | 68.644 | 118 | 35 | 1 | 1 | 116 | 95 | 212 | 3.62e-33 | 120 |
| MS.gene073868.t1 | AT1G20900 | 62.992 | 127 | 38 | 1 | 1 | 118 | 118 | 244 | 2.55e-29 | 110 |
| MS.gene073868.t1 | AT5G62260 | 41.176 | 119 | 67 | 1 | 1 | 116 | 165 | 283 | 1.10e-21 | 90.5 |
| MS.gene073868.t1 | AT5G51590 | 41.441 | 111 | 62 | 1 | 1 | 108 | 183 | 293 | 8.31e-21 | 89.4 |
| MS.gene073868.t1 | AT4G12080 | 38.462 | 130 | 71 | 3 | 1 | 123 | 175 | 302 | 1.12e-20 | 88.6 |
| MS.gene073868.t1 | AT3G04590 | 36.434 | 129 | 74 | 1 | 1 | 129 | 176 | 296 | 1.24e-20 | 89.0 |
| MS.gene073868.t1 | AT3G04590 | 36.434 | 129 | 74 | 1 | 1 | 129 | 176 | 296 | 1.67e-20 | 87.4 |
| MS.gene073868.t1 | AT4G25320 | 42.202 | 109 | 60 | 1 | 3 | 108 | 173 | 281 | 2.03e-20 | 88.2 |
| MS.gene073868.t1 | AT2G45850 | 36.054 | 147 | 90 | 2 | 1 | 144 | 167 | 312 | 2.63e-20 | 87.4 |
| MS.gene073868.t1 | AT2G45850 | 36.054 | 147 | 90 | 2 | 1 | 144 | 167 | 312 | 2.63e-20 | 87.4 |
| MS.gene073868.t1 | AT5G62260 | 43.119 | 109 | 59 | 1 | 3 | 108 | 167 | 275 | 5.90e-20 | 87.0 |
| MS.gene073868.t1 | AT5G62260 | 43.119 | 109 | 59 | 1 | 3 | 108 | 167 | 275 | 5.90e-20 | 87.0 |
| MS.gene073868.t1 | AT1G63470 | 42.342 | 111 | 60 | 2 | 1 | 108 | 182 | 291 | 1.67e-19 | 85.5 |
| MS.gene073868.t1 | AT2G33620 | 44.144 | 111 | 59 | 2 | 1 | 108 | 168 | 278 | 1.92e-19 | 85.1 |
| MS.gene073868.t1 | AT2G33620 | 44.144 | 111 | 59 | 2 | 1 | 108 | 168 | 278 | 1.92e-19 | 85.1 |
| MS.gene073868.t1 | AT2G33620 | 44.144 | 111 | 59 | 2 | 1 | 108 | 168 | 278 | 1.92e-19 | 85.1 |
| MS.gene073868.t1 | AT2G33620 | 44.144 | 111 | 59 | 2 | 1 | 108 | 168 | 278 | 1.92e-19 | 85.1 |
| MS.gene073868.t1 | AT4G17950 | 40.708 | 113 | 62 | 2 | 1 | 108 | 226 | 338 | 1.75e-18 | 83.2 |
| MS.gene073868.t1 | AT2G45850 | 40.179 | 112 | 64 | 1 | 1 | 109 | 167 | 278 | 1.87e-17 | 78.6 |
| MS.gene073868.t1 | AT4G00200 | 38.462 | 117 | 69 | 1 | 1 | 114 | 128 | 244 | 8.17e-15 | 72.0 |
| MS.gene073868.t1 | AT4G00200 | 38.462 | 117 | 69 | 1 | 1 | 114 | 128 | 244 | 8.17e-15 | 72.0 |
| MS.gene073868.t1 | AT4G22770 | 40.541 | 111 | 63 | 1 | 1 | 108 | 155 | 265 | 1.37e-13 | 68.6 |
| MS.gene073868.t1 | AT4G22770 | 40.541 | 111 | 63 | 1 | 1 | 108 | 155 | 265 | 1.37e-13 | 68.6 |
| MS.gene073868.t1 | AT3G61310 | 38.889 | 126 | 73 | 3 | 3 | 124 | 171 | 296 | 1.98e-13 | 68.2 |
| MS.gene073868.t1 | AT1G63480 | 29.167 | 168 | 102 | 4 | 1 | 152 | 159 | 325 | 4.22e-13 | 67.4 |
| MS.gene073868.t1 | AT1G63480 | 29.167 | 168 | 102 | 4 | 1 | 152 | 159 | 325 | 4.22e-13 | 67.4 |
| MS.gene073868.t1 | AT1G63480 | 29.167 | 168 | 102 | 4 | 1 | 152 | 159 | 325 | 4.22e-13 | 67.4 |
| MS.gene073868.t1 | AT1G63480 | 29.167 | 168 | 102 | 4 | 1 | 152 | 159 | 325 | 4.22e-13 | 67.4 |
| MS.gene073868.t1 | AT1G63480 | 29.167 | 168 | 102 | 4 | 1 | 152 | 159 | 325 | 4.22e-13 | 67.4 |
| MS.gene073868.t1 | AT1G63480 | 29.167 | 168 | 102 | 4 | 1 | 152 | 165 | 331 | 5.23e-13 | 67.0 |
| MS.gene073868.t1 | AT1G63480 | 29.167 | 168 | 102 | 4 | 1 | 152 | 165 | 331 | 5.23e-13 | 67.0 |
| MS.gene073868.t1 | AT5G46640 | 42.857 | 112 | 59 | 2 | 1 | 108 | 185 | 295 | 8.56e-13 | 66.6 |
Find 82 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAAGGTGGTGGTGGTGG+TGG | 0.191452 | 1.2:+27431845 | MS.gene073868:CDS |
| GGCGGTGGCGGTGGTGGAGG+TGG | 0.240877 | 1.2:+27431932 | MS.gene073868:CDS |
| TTCCATGGCCTCATGGAATT+AGG | 0.270539 | 1.2:+27432059 | MS.gene073868:CDS |
| GTTGTCGCCTTCTTGCAAAC+TGG | 0.280850 | 1.2:-27431520 | None:intergenic |
| CTGGTGCTGCTGGTTGTCTA+AGG | 0.295952 | 1.2:-27431589 | None:intergenic |
| CCACCAAATCTTCTTCCTAA+TGG | 0.304808 | 1.2:+27432013 | MS.gene073868:CDS |
| GGTGGTGGTGGTGGGGTCCA+TGG | 0.322478 | 1.2:+27431854 | MS.gene073868:CDS |
| GATTGCTGCTGGACCTGTTA+TGG | 0.325355 | 1.2:+27431763 | MS.gene073868:CDS |
| AATTCATCTCCTCCTGGAAT+TGG | 0.345180 | 1.2:+27431902 | MS.gene073868:CDS |
| AGTAGTGGCGGTGGCGGTGG+TGG | 0.353356 | 1.2:+27431926 | MS.gene073868:CDS |
| GTTGGACCTTTGATTGCTGC+TGG | 0.359578 | 1.2:+27431752 | MS.gene073868:CDS |
| CGGTGGCGGTGGTGGAGGTG+GGG | 0.361505 | 1.2:+27431934 | MS.gene073868:CDS |
| CCTGCTCCTCCAGGCGCAAC+CGG | 0.373469 | 1.2:+27431677 | MS.gene073868:CDS |
| GGTGGCGGTGGTGGAGGTGG+GGG | 0.375444 | 1.2:+27431935 | MS.gene073868:CDS |
| GCGGTGGCGGTGGTGGAGGT+GGG | 0.378917 | 1.2:+27431933 | MS.gene073868:CDS |
| TTTGATATTCTATCCTTAAC+CGG | 0.390127 | 1.2:+27431638 | MS.gene073868:CDS |
| GGAGCTGTTGTAGCACTTCA+TGG | 0.401949 | 1.2:+27431611 | MS.gene073868:CDS |
| CCACCATTAGGAAGAAGATT+TGG | 0.402836 | 1.2:-27432016 | None:intergenic |
| AGTGGCGGTGGCGGTGGTGG+AGG | 0.407522 | 1.2:+27431929 | MS.gene073868:CDS |
| GAGGATGAAGGTGGTGGTGG+TGG | 0.411389 | 1.2:+27431842 | MS.gene073868:CDS |
| GTAGCAGCAATAACCATAAC+AGG | 0.415453 | 1.2:-27431776 | None:intergenic |
| GGAAGTAGTGGCGGTGGCGG+TGG | 0.420305 | 1.2:+27431923 | MS.gene073868:CDS |
| CTACCGGGACCTGCTCCTCC+AGG | 0.422866 | 1.2:+27431668 | MS.gene073868:CDS |
| GTTGTTGGTGGAAGTGTTGT+TGG | 0.422950 | 1.2:+27431734 | MS.gene073868:CDS |
| ACAACAGCTCCTGGTGCTGC+TGG | 0.430712 | 1.2:-27431599 | None:intergenic |
| CCGCCACTACTTCCAATTCC+AGG | 0.433840 | 1.2:-27431914 | None:intergenic |
| ACTGTGAGTCCGGTTGCGCC+TGG | 0.442371 | 1.2:-27431686 | None:intergenic |
| CCGGTTGCGCCTGGAGGAGC+AGG | 0.444168 | 1.2:-27431677 | None:intergenic |
| GATGAGGATGAAGGTGGTGG+TGG | 0.445547 | 1.2:+27431839 | MS.gene073868:CDS |
| CATGGAGGACATCATGTTGC+TGG | 0.452928 | 1.2:+27431872 | MS.gene073868:CDS |
| GGTGGTGGTGGGGTCCATGG+AGG | 0.456409 | 1.2:+27431857 | MS.gene073868:CDS |
| TGTCCCACATGACCACCATT+AGG | 0.461538 | 1.2:-27432028 | None:intergenic |
| TTGTCGCCTTCTTGCAAACT+GGG | 0.462433 | 1.2:-27431519 | None:intergenic |
| GGTGGTAATTCATCTCCTCC+TGG | 0.479433 | 1.2:+27431896 | MS.gene073868:CDS |
| CGGTAGAAAAGCTCCGGTTA+AGG | 0.493980 | 1.2:-27431651 | None:intergenic |
| GGCTAAGTACACTGTGAGTC+CGG | 0.495462 | 1.2:-27431696 | None:intergenic |
| ATTGGAAGTAGTGGCGGTGG+CGG | 0.495469 | 1.2:+27431920 | MS.gene073868:CDS |
| TCTTCCTAATGGTGGTCATG+TGG | 0.500420 | 1.2:+27432024 | MS.gene073868:CDS |
| AAAGGCATAGAAGATGGATC+TGG | 0.504682 | 1.2:-27431980 | None:intergenic |
| TTATACAAAGGCATAGAAGA+TGG | 0.513643 | 1.2:-27431986 | None:intergenic |
| CTTCCTAATGGTGGTCATGT+GGG | 0.517416 | 1.2:+27432025 | MS.gene073868:CDS |
| GCGCCTGGAGGAGCAGGTCC+CGG | 0.523911 | 1.2:-27431671 | None:intergenic |
| AACAACTTGACCTTGTCCAC+CGG | 0.525030 | 1.2:-27431717 | None:intergenic |
| CCATTAGGAAGAAGATTTGG+TGG | 0.526081 | 1.2:-27432013 | None:intergenic |
| CATGTGATGGAAGTATCCTC+TGG | 0.527013 | 1.2:+27431473 | None:intergenic |
| TGAAGTGCTACAACAGCTCC+TGG | 0.542969 | 1.2:-27431608 | None:intergenic |
| CTGTTGTAGCACTTCATGGA+AGG | 0.544498 | 1.2:+27431615 | MS.gene073868:CDS |
| TGGTGCTGCTGGTTGTCTAA+GGG | 0.547569 | 1.2:-27431588 | None:intergenic |
| GGCCTAATTCCATGAGGCCA+TGG | 0.547705 | 1.2:-27432061 | None:intergenic |
| GGACATCATGTTGCTGGTGG+TGG | 0.550245 | 1.2:+27431878 | MS.gene073868:CDS |
| GGTGGACAAGGTCAAGTTGT+TGG | 0.552217 | 1.2:+27431719 | MS.gene073868:CDS |
| AGGTCCCGGTAGAAAAGCTC+CGG | 0.559148 | 1.2:-27431657 | None:intergenic |
| GTGAGTCCGGTTGCGCCTGG+AGG | 0.561910 | 1.2:-27431683 | None:intergenic |
| GTGTACTTAGCCGGTGGACA+AGG | 0.563201 | 1.2:+27431707 | MS.gene073868:CDS |
| TCATCCTCATCTTCCTCAAG+TGG | 0.564149 | 1.2:-27431827 | None:intergenic |
| CTTAGACAACCAGCAGCACC+AGG | 0.566004 | 1.2:+27431590 | MS.gene073868:CDS |
| GGAATTGGAAGTAGTGGCGG+TGG | 0.573564 | 1.2:+27431917 | MS.gene073868:CDS |
| CTTGAGGAAGATGAGGATGA+AGG | 0.574414 | 1.2:+27431830 | MS.gene073868:CDS |
| TTCAGCTACATCTGCTCCAG+AGG | 0.579175 | 1.2:-27431489 | None:intergenic |
| CGCGGCGTTTGTGTTCTAAG+TGG | 0.581781 | 1.2:+27431542 | MS.gene073868:CDS |
| GTTTGTGTTCTAAGTGGTAG+CGG | 0.582162 | 1.2:+27431548 | MS.gene073868:CDS |
| GGACAAGGTCAAGTTGTTGG+TGG | 0.585040 | 1.2:+27431722 | MS.gene073868:CDS |
| GAAGATGAGGATGAAGGTGG+TGG | 0.585292 | 1.2:+27431836 | MS.gene073868:CDS |
| TTATGAAAGATTGCCACTTG+AGG | 0.589762 | 1.2:+27431814 | MS.gene073868:CDS |
| CCTCCTGGAATTGGAAGTAG+TGG | 0.591807 | 1.2:+27431911 | MS.gene073868:CDS |
| GTGTAGCCCAGTTTGCAAGA+AGG | 0.599811 | 1.2:+27431513 | MS.gene073868:CDS |
| TTTGGTGGCAAATTATACAA+AGG | 0.599913 | 1.2:-27431998 | None:intergenic |
| ACAGGTCCAGCAGCAATCAA+AGG | 0.606319 | 1.2:-27431758 | None:intergenic |
| CAGCAACATGATGTCCTCCA+TGG | 0.612529 | 1.2:-27431871 | None:intergenic |
| GGACTCACAGTGTACTTAGC+CGG | 0.612698 | 1.2:+27431698 | MS.gene073868:CDS |
| ATTGCCACTTGAGGAAGATG+AGG | 0.613376 | 1.2:+27431823 | MS.gene073868:CDS |
| CCAAATCTTCTTCCTAATGG+TGG | 0.613694 | 1.2:+27432016 | MS.gene073868:CDS |
| GAAGGTGGCCAGATTGCATG+TGG | 0.624756 | 1.2:-27431958 | None:intergenic |
| TAGAAGATGGATCTGGAAGG+TGG | 0.632025 | 1.2:-27431973 | None:intergenic |
| GGAGGACATCATGTTGCTGG+TGG | 0.633234 | 1.2:+27431875 | MS.gene073868:CDS |
| CCTGGAATTGGAAGTAGTGG+CGG | 0.637275 | 1.2:+27431914 | MS.gene073868:CDS |
| CTCACAGTGTACTTAGCCGG+TGG | 0.652416 | 1.2:+27431701 | MS.gene073868:CDS |
| GAGGAAGATGAGGATGAAGG+TGG | 0.673653 | 1.2:+27431833 | MS.gene073868:CDS |
| GCATAGAAGATGGATCTGGA+AGG | 0.680296 | 1.2:-27431976 | None:intergenic |
| TAGGGTGGCCTAATTCCATG+AGG | 0.740787 | 1.2:-27432067 | None:intergenic |
| TTTGCAAGAAGGCGACAACG+CGG | 0.749460 | 1.2:+27431524 | MS.gene073868:CDS |
| CCACTACTTCCAATTCCAGG+AGG | 0.753539 | 1.2:-27431911 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTTGATATTCTATCCTTAAC+CGG | + | chr1.2:27431638-27431657 | MS.gene073868:CDS | 25.0% |
| ! | TTATACAAAGGCATAGAAGA+TGG | - | chr1.2:27431989-27432008 | None:intergenic | 30.0% |
| ! | TTTGGTGGCAAATTATACAA+AGG | - | chr1.2:27432001-27432020 | None:intergenic | 30.0% |
| ! | TTATGAAAGATTGCCACTTG+AGG | + | chr1.2:27431814-27431833 | MS.gene073868:CDS | 35.0% |
| AATTCATCTCCTCCTGGAAT+TGG | + | chr1.2:27431902-27431921 | MS.gene073868:CDS | 40.0% | |
| CCAAATCTTCTTCCTAATGG+TGG | + | chr1.2:27432016-27432035 | MS.gene073868:CDS | 40.0% | |
| CCACCAAATCTTCTTCCTAA+TGG | + | chr1.2:27432013-27432032 | MS.gene073868:CDS | 40.0% | |
| CCACCATTAGGAAGAAGATT+TGG | - | chr1.2:27432019-27432038 | None:intergenic | 40.0% | |
| CCATTAGGAAGAAGATTTGG+TGG | - | chr1.2:27432016-27432035 | None:intergenic | 40.0% | |
| GTAGCAGCAATAACCATAAC+AGG | - | chr1.2:27431779-27431798 | None:intergenic | 40.0% | |
| ! | AAAGGCATAGAAGATGGATC+TGG | - | chr1.2:27431983-27432002 | None:intergenic | 40.0% |
| ! | GTTTGTGTTCTAAGTGGTAG+CGG | + | chr1.2:27431548-27431567 | MS.gene073868:CDS | 40.0% |
| AACAACTTGACCTTGTCCAC+CGG | - | chr1.2:27431720-27431739 | None:intergenic | 45.0% | |
| CTGTTGTAGCACTTCATGGA+AGG | + | chr1.2:27431615-27431634 | MS.gene073868:CDS | 45.0% | |
| CTTCCTAATGGTGGTCATGT+GGG | + | chr1.2:27432025-27432044 | MS.gene073868:CDS | 45.0% | |
| CTTGAGGAAGATGAGGATGA+AGG | + | chr1.2:27431830-27431849 | MS.gene073868:CDS | 45.0% | |
| GCATAGAAGATGGATCTGGA+AGG | - | chr1.2:27431979-27431998 | None:intergenic | 45.0% | |
| TAGAAGATGGATCTGGAAGG+TGG | - | chr1.2:27431976-27431995 | None:intergenic | 45.0% | |
| TCATCCTCATCTTCCTCAAG+TGG | - | chr1.2:27431830-27431849 | None:intergenic | 45.0% | |
| TCTTCCTAATGGTGGTCATG+TGG | + | chr1.2:27432024-27432043 | MS.gene073868:CDS | 45.0% | |
| TTCCATGGCCTCATGGAATT+AGG | + | chr1.2:27432059-27432078 | MS.gene073868:CDS | 45.0% | |
| TTGTCGCCTTCTTGCAAACT+GGG | - | chr1.2:27431522-27431541 | None:intergenic | 45.0% | |
| ! | ATTGCCACTTGAGGAAGATG+AGG | + | chr1.2:27431823-27431842 | MS.gene073868:CDS | 45.0% |
| ! | CTTAACCGGAGCTTTTCTAC+CGG | + | chr1.2:27431652-27431671 | MS.gene073868:CDS | 45.0% |
| ! | TGGGACATGAAGCTTTTCCA+TGG | + | chr1.2:27432044-27432063 | MS.gene073868:CDS | 45.0% |
| ! | TTAACCGGAGCTTTTCTACC+GGG | + | chr1.2:27431653-27431672 | MS.gene073868:CDS | 45.0% |
| !! | GTTGTTGGTGGAAGTGTTGT+TGG | + | chr1.2:27431734-27431753 | MS.gene073868:CDS | 45.0% |
| ACAGGTCCAGCAGCAATCAA+AGG | - | chr1.2:27431761-27431780 | None:intergenic | 50.0% | |
| CAGCAACATGATGTCCTCCA+TGG | - | chr1.2:27431874-27431893 | None:intergenic | 50.0% | |
| CATGGAGGACATCATGTTGC+TGG | + | chr1.2:27431872-27431891 | MS.gene073868:CDS | 50.0% | |
| CCACTACTTCCAATTCCAGG+AGG | - | chr1.2:27431914-27431933 | None:intergenic | 50.0% | |
| CCTCCTGGAATTGGAAGTAG+TGG | + | chr1.2:27431911-27431930 | MS.gene073868:CDS | 50.0% | |
| CCTGGAATTGGAAGTAGTGG+CGG | + | chr1.2:27431914-27431933 | MS.gene073868:CDS | 50.0% | |
| CGGTAGAAAAGCTCCGGTTA+AGG | - | chr1.2:27431654-27431673 | None:intergenic | 50.0% | |
| GAAGATGAGGATGAAGGTGG+TGG | + | chr1.2:27431836-27431855 | MS.gene073868:CDS | 50.0% | |
| GAGGAAGATGAGGATGAAGG+TGG | + | chr1.2:27431833-27431852 | MS.gene073868:CDS | 50.0% | |
| GATTGCTGCTGGACCTGTTA+TGG | + | chr1.2:27431763-27431782 | MS.gene073868:CDS | 50.0% | |
| GGACTCACAGTGTACTTAGC+CGG | + | chr1.2:27431698-27431717 | MS.gene073868:CDS | 50.0% | |
| GGAGCTGTTGTAGCACTTCA+TGG | + | chr1.2:27431611-27431630 | MS.gene073868:CDS | 50.0% | |
| GGCTAAGTACACTGTGAGTC+CGG | - | chr1.2:27431699-27431718 | None:intergenic | 50.0% | |
| GGTGGTAATTCATCTCCTCC+TGG | + | chr1.2:27431896-27431915 | MS.gene073868:CDS | 50.0% | |
| GTGTAGCCCAGTTTGCAAGA+AGG | + | chr1.2:27431513-27431532 | MS.gene073868:CDS | 50.0% | |
| GTTGGACCTTTGATTGCTGC+TGG | + | chr1.2:27431752-27431771 | MS.gene073868:CDS | 50.0% | |
| GTTGTCGCCTTCTTGCAAAC+TGG | - | chr1.2:27431523-27431542 | None:intergenic | 50.0% | |
| TAGGGTGGCCTAATTCCATG+AGG | - | chr1.2:27432070-27432089 | None:intergenic | 50.0% | |
| TGTCCCACATGACCACCATT+AGG | - | chr1.2:27432031-27432050 | None:intergenic | 50.0% | |
| TTCAGCTACATCTGCTCCAG+AGG | - | chr1.2:27431492-27431511 | None:intergenic | 50.0% | |
| TTTGCAAGAAGGCGACAACG+CGG | + | chr1.2:27431524-27431543 | MS.gene073868:CDS | 50.0% | |
| ! | GAAGCTTTTCCATGGCCTCA+TGG | + | chr1.2:27432052-27432071 | MS.gene073868:CDS | 50.0% |
| ! | GGACAAGGTCAAGTTGTTGG+TGG | + | chr1.2:27431722-27431741 | MS.gene073868:CDS | 50.0% |
| ! | GGTGGACAAGGTCAAGTTGT+TGG | + | chr1.2:27431719-27431738 | MS.gene073868:CDS | 50.0% |
| ! | TGAAGTGCTACAACAGCTCC+TGG | - | chr1.2:27431611-27431630 | None:intergenic | 50.0% |
| !! | TGGTGCTGCTGGTTGTCTAA+GGG | - | chr1.2:27431591-27431610 | None:intergenic | 50.0% |
| AGGTCCCGGTAGAAAAGCTC+CGG | - | chr1.2:27431660-27431679 | None:intergenic | 55.0% | |
| ATTGGAAGTAGTGGCGGTGG+CGG | + | chr1.2:27431920-27431939 | MS.gene073868:CDS | 55.0% | |
| CCGCCACTACTTCCAATTCC+AGG | - | chr1.2:27431917-27431936 | None:intergenic | 55.0% | |
| CTCACAGTGTACTTAGCCGG+TGG | + | chr1.2:27431701-27431720 | MS.gene073868:CDS | 55.0% | |
| CTTAGACAACCAGCAGCACC+AGG | + | chr1.2:27431590-27431609 | MS.gene073868:CDS | 55.0% | |
| GAAGGTGGCCAGATTGCATG+TGG | - | chr1.2:27431961-27431980 | None:intergenic | 55.0% | |
| GGAATTGGAAGTAGTGGCGG+TGG | + | chr1.2:27431917-27431936 | MS.gene073868:CDS | 55.0% | |
| GGACATCATGTTGCTGGTGG+TGG | + | chr1.2:27431878-27431897 | MS.gene073868:CDS | 55.0% | |
| GGAGGACATCATGTTGCTGG+TGG | + | chr1.2:27431875-27431894 | MS.gene073868:CDS | 55.0% | |
| GGCCTAATTCCATGAGGCCA+TGG | - | chr1.2:27432064-27432083 | None:intergenic | 55.0% | |
| GTGTACTTAGCCGGTGGACA+AGG | + | chr1.2:27431707-27431726 | MS.gene073868:CDS | 55.0% | |
| ! | CGCGGCGTTTGTGTTCTAAG+TGG | + | chr1.2:27431542-27431561 | MS.gene073868:CDS | 55.0% |
| ! | GATGAGGATGAAGGTGGTGG+TGG | + | chr1.2:27431839-27431858 | MS.gene073868:CDS | 55.0% |
| !! | ATGAAGGTGGTGGTGGTGGT+GGG | + | chr1.2:27431846-27431865 | MS.gene073868:CDS | 55.0% |
| !! | CTGGTGCTGCTGGTTGTCTA+AGG | - | chr1.2:27431592-27431611 | None:intergenic | 55.0% |
| !! | ACAACAGCTCCTGGTGCTGC+TGG | - | chr1.2:27431602-27431621 | None:intergenic | 60.0% |
| !! | GAGGATGAAGGTGGTGGTGG+TGG | + | chr1.2:27431842-27431861 | MS.gene073868:CDS | 60.0% |
| !! | GATGAAGGTGGTGGTGGTGG+TGG | + | chr1.2:27431845-27431864 | MS.gene073868:CDS | 60.0% |
| !! | TGAAGGTGGTGGTGGTGGTG+GGG | + | chr1.2:27431847-27431866 | MS.gene073868:CDS | 60.0% |
| ACTGTGAGTCCGGTTGCGCC+TGG | - | chr1.2:27431689-27431708 | None:intergenic | 65.0% | |
| GGTGGGGGCCACATGCAATC+TGG | + | chr1.2:27431950-27431969 | MS.gene073868:CDS | 65.0% | |
| CCTGCTCCTCCAGGCGCAAC+CGG | + | chr1.2:27431677-27431696 | MS.gene073868:CDS | 70.0% | |
| CTACCGGGACCTGCTCCTCC+AGG | + | chr1.2:27431668-27431687 | MS.gene073868:CDS | 70.0% | |
| GTGAGTCCGGTTGCGCCTGG+AGG | - | chr1.2:27431686-27431705 | None:intergenic | 70.0% | |
| ! | AGTAGTGGCGGTGGCGGTGG+TGG | + | chr1.2:27431926-27431945 | MS.gene073868:CDS | 70.0% |
| ! | GGAAGTAGTGGCGGTGGCGG+TGG | + | chr1.2:27431923-27431942 | MS.gene073868:CDS | 70.0% |
| !! | GGTGGTGGTGGGGTCCATGG+AGG | + | chr1.2:27431857-27431876 | MS.gene073868:CDS | 70.0% |
| !! | GGTGGTGGTGGTGGGGTCCA+TGG | + | chr1.2:27431854-27431873 | MS.gene073868:CDS | 70.0% |
| CCGGTTGCGCCTGGAGGAGC+AGG | - | chr1.2:27431680-27431699 | None:intergenic | 75.0% | |
| GCGCCTGGAGGAGCAGGTCC+CGG | - | chr1.2:27431674-27431693 | None:intergenic | 75.0% | |
| ! | AGTGGCGGTGGCGGTGGTGG+AGG | + | chr1.2:27431929-27431948 | MS.gene073868:CDS | 75.0% |
| !! | CGGTGGCGGTGGTGGAGGTG+GGG | + | chr1.2:27431934-27431953 | MS.gene073868:CDS | 75.0% |
| !! | GCGGTGGCGGTGGTGGAGGT+GGG | + | chr1.2:27431933-27431952 | MS.gene073868:CDS | 75.0% |
| !! | GGTGGCGGTGGTGGAGGTGG+GGG | + | chr1.2:27431935-27431954 | MS.gene073868:CDS | 75.0% |
| !!! | GGCGGTGGCGGTGGTGGAGG+TGG | + | chr1.2:27431932-27431951 | MS.gene073868:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 27431479 | 27432093 | 27431479 | ID=MS.gene073868 |
| chr1.2 | mRNA | 27431479 | 27432093 | 27431479 | ID=MS.gene073868.t1;Parent=MS.gene073868 |
| chr1.2 | exon | 27431479 | 27432093 | 27431479 | ID=MS.gene073868.t1.exon1;Parent=MS.gene073868.t1 |
| chr1.2 | CDS | 27431479 | 27432093 | 27431479 | ID=cds.MS.gene073868.t1;Parent=MS.gene073868.t1 |
| Gene Sequence |
| Protein sequence |
