Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55697.t1 | KHN18636.1 | 73.7 | 419 | 108 | 2 | 1 | 419 | 58 | 474 | 2.60E-184 | 654.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55697.t1 | Q2QYH7 | 51.2 | 420 | 202 | 2 | 2 | 419 | 104 | 522 | 1.4e-130 | 467.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55697.t1 | I1MZM8 | 73.7 | 419 | 108 | 2 | 1 | 419 | 98 | 514 | 1.9e-184 | 654.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene55697 | -0.847096 | 1.44E-59 | -1.69E-46 |
| MS.gene049217 | MS.gene55697 | -0.826707 | 2.34E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene55697 | -0.841255 | 5.31E-58 | -1.69E-46 |
| MS.gene049232 | MS.gene55697 | -0.836591 | 8.55E-57 | -1.69E-46 |
| MS.gene049259 | MS.gene55697 | 0.828316 | 9.62E-55 | -1.69E-46 |
| MS.gene049281 | MS.gene55697 | 0.844193 | 8.80E-59 | -1.69E-46 |
| MS.gene049285 | MS.gene55697 | -0.855045 | 8.21E-62 | -1.69E-46 |
| MS.gene049320 | MS.gene55697 | -0.855235 | 7.23E-62 | -1.69E-46 |
| MS.gene049549 | MS.gene55697 | 0.818696 | 1.71E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene55697 | -0.807595 | 4.68E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene55697 | 0.939567 | 1.02E-99 | -1.69E-46 |
| MS.gene049627 | MS.gene55697 | -0.802095 | 6.60E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene55697 | -0.825776 | 3.90E-54 | -1.69E-46 |
| MS.gene049634 | MS.gene55697 | 0.846666 | 1.88E-59 | -1.69E-46 |
| MS.gene050082 | MS.gene55697 | 0.842872 | 1.98E-58 | -1.69E-46 |
| MS.gene05010 | MS.gene55697 | -0.843264 | 1.56E-58 | -1.69E-46 |
| MS.gene050163 | MS.gene55697 | -0.825997 | 3.45E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene55697 | -0.828394 | 9.21E-55 | -1.69E-46 |
| MS.gene050170 | MS.gene55697 | -0.84176 | 3.91E-58 | -1.69E-46 |
| MS.gene050173 | MS.gene55697 | 0.800813 | 1.21E-48 | -1.69E-46 |
| MS.gene050216 | MS.gene55697 | -0.837554 | 4.85E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene55697 | -0.833232 | 6.00E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene55697 | -0.840289 | 9.51E-58 | -1.69E-46 |
| MS.gene050380 | MS.gene55697 | 0.803196 | 3.91E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene55697 | 0.878159 | 3.52E-69 | -1.69E-46 |
| MS.gene050444 | MS.gene55697 | -0.812104 | 5.01E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene55697 | -0.867446 | 1.36E-65 | -1.69E-46 |
| MS.gene050504 | MS.gene55697 | -0.868806 | 4.96E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene55697 | -0.815656 | 8.27E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene55697 | -0.831789 | 1.37E-55 | -1.69E-46 |
| MS.gene050612 | MS.gene55697 | -0.870164 | 1.79E-66 | -1.69E-46 |
| MS.gene050662 | MS.gene55697 | -0.808529 | 2.96E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene55697 | -0.863808 | 1.91E-64 | -1.69E-46 |
| MS.gene050699 | MS.gene55697 | -0.846826 | 1.70E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene55697 | -0.811075 | 8.39E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene55697 | -0.84548 | 3.96E-59 | -1.69E-46 |
| MS.gene05079 | MS.gene55697 | 0.818074 | 2.37E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene55697 | -0.816461 | 5.47E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene55697 | -0.854961 | 8.68E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene55697 | -0.854235 | 1.41E-61 | -1.69E-46 |
| MS.gene050883 | MS.gene55697 | 0.843356 | 1.47E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene55697 | -0.811459 | 6.93E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene55697 | -0.807713 | 4.42E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene55697 | -0.83958 | 1.46E-57 | -1.69E-46 |
| MS.gene05100 | MS.gene55697 | -0.800698 | 1.28E-48 | -1.69E-46 |
| MS.gene051044 | MS.gene55697 | 0.832928 | 7.14E-56 | -1.69E-46 |
| MS.gene05104 | MS.gene55697 | 0.911148 | 8.44E-83 | -1.69E-46 |
| MS.gene051127 | MS.gene55697 | 0.86574 | 4.74E-65 | -1.69E-46 |
| MS.gene051138 | MS.gene55697 | 0.851137 | 1.08E-60 | -1.69E-46 |
| MS.gene051268 | MS.gene55697 | -0.818014 | 2.44E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene55697 | 0.871961 | 4.59E-67 | -1.69E-46 |
| MS.gene051366 | MS.gene55697 | 0.867474 | 1.33E-65 | -1.69E-46 |
| MS.gene051367 | MS.gene55697 | 0.852886 | 3.44E-61 | -1.69E-46 |
| MS.gene05141 | MS.gene55697 | 0.80375 | 3.00E-49 | -1.69E-46 |
| MS.gene051422 | MS.gene55697 | 0.820079 | 8.29E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene55697 | -0.803049 | 4.20E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene55697 | 0.83696 | 6.89E-57 | -1.69E-46 |
| MS.gene051694 | MS.gene55697 | -0.838421 | 2.90E-57 | -1.69E-46 |
| MS.gene051810 | MS.gene55697 | -0.815535 | 8.80E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene55697 | -0.832807 | 7.66E-56 | -1.69E-46 |
| MS.gene051863 | MS.gene55697 | 0.80574 | 1.15E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene55697 | -0.812806 | 3.52E-51 | -1.69E-46 |
| MS.gene051946 | MS.gene55697 | 0.84185 | 3.70E-58 | -1.69E-46 |
| MS.gene051973 | MS.gene55697 | 0.818903 | 1.54E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene55697 | -0.82079 | 5.69E-53 | -1.69E-46 |
| MS.gene052211 | MS.gene55697 | 0.811288 | 7.55E-51 | -1.69E-46 |
| MS.gene05234 | MS.gene55697 | 0.825009 | 5.92E-54 | -1.69E-46 |
| MS.gene05240 | MS.gene55697 | 0.817724 | 2.84E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene55697 | -0.830982 | 2.16E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene55697 | -0.852033 | 6.02E-61 | -1.69E-46 |
| MS.gene052503 | MS.gene55697 | -0.808844 | 2.54E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene55697 | -0.809828 | 1.56E-50 | -1.69E-46 |
| MS.gene052805 | MS.gene55697 | 0.817957 | 2.52E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene55697 | -0.809825 | 1.56E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene55697 | -0.808752 | 2.65E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene55697 | -0.801629 | 8.23E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene55697 | -0.826919 | 2.08E-54 | -1.69E-46 |
| MS.gene052966 | MS.gene55697 | -0.838898 | 2.19E-57 | -1.69E-46 |
| MS.gene053203 | MS.gene55697 | -0.847153 | 1.38E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene55697 | -0.824874 | 6.37E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene55697 | -0.822882 | 1.87E-53 | -1.69E-46 |
| MS.gene053420 | MS.gene55697 | 0.889778 | 1.79E-73 | -1.69E-46 |
| MS.gene053436 | MS.gene55697 | -0.819781 | 9.70E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene55697 | -0.854029 | 1.62E-61 | -1.69E-46 |
| MS.gene053488 | MS.gene55697 | 0.83263 | 8.47E-56 | -1.69E-46 |
| MS.gene053549 | MS.gene55697 | 0.816017 | 6.87E-52 | -1.69E-46 |
| MS.gene053561 | MS.gene55697 | 0.856412 | 3.27E-62 | -1.69E-46 |
| MS.gene053574 | MS.gene55697 | -0.825835 | 3.77E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene55697 | -0.830486 | 2.86E-55 | -1.69E-46 |
| MS.gene053887 | MS.gene55697 | 0.825112 | 5.60E-54 | -1.69E-46 |
| MS.gene054054 | MS.gene55697 | 0.823947 | 1.05E-53 | -1.69E-46 |
| MS.gene054056 | MS.gene55697 | 0.810585 | 1.07E-50 | -1.69E-46 |
| MS.gene054146 | MS.gene55697 | 0.807429 | 5.08E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene55697 | -0.80502 | 1.63E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene55697 | -0.827129 | 1.86E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene55697 | -0.812743 | 3.64E-51 | -1.69E-46 |
| MS.gene054616 | MS.gene55697 | 0.815948 | 7.12E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene55697 | -0.832778 | 7.78E-56 | -1.69E-46 |
| MS.gene054706 | MS.gene55697 | 0.827056 | 1.93E-54 | -1.69E-46 |
| MS.gene054707 | MS.gene55697 | 0.853057 | 3.07E-61 | -1.69E-46 |
| MS.gene054708 | MS.gene55697 | 0.865773 | 4.63E-65 | -1.69E-46 |
| MS.gene05470 | MS.gene55697 | -0.819762 | 9.79E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene55697 | -0.85607 | 4.12E-62 | -1.69E-46 |
| MS.gene054959 | MS.gene55697 | 0.844549 | 7.06E-59 | -1.69E-46 |
| MS.gene055124 | MS.gene55697 | 0.848314 | 6.63E-60 | -1.69E-46 |
| MS.gene055139 | MS.gene55697 | 0.825228 | 5.26E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene55697 | 0.871193 | 8.24E-67 | -1.69E-46 |
| MS.gene055202 | MS.gene55697 | 0.872379 | 3.33E-67 | -1.69E-46 |
| MS.gene055206 | MS.gene55697 | -0.802257 | 6.11E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene55697 | -0.870689 | 1.21E-66 | -1.69E-46 |
| MS.gene055502 | MS.gene55697 | -0.8586 | 7.37E-63 | -1.69E-46 |
| MS.gene055577 | MS.gene55697 | -0.850623 | 1.51E-60 | -1.69E-46 |
| MS.gene055722 | MS.gene55697 | -0.810313 | 1.23E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene55697 | -0.816762 | 4.68E-52 | -1.69E-46 |
| MS.gene055750 | MS.gene55697 | -0.829143 | 6.07E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene55697 | -0.829106 | 6.20E-55 | -1.69E-46 |
| MS.gene055776 | MS.gene55697 | -0.806758 | 7.04E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene55697 | -0.855484 | 6.12E-62 | -1.69E-46 |
| MS.gene055941 | MS.gene55697 | -0.803551 | 3.30E-49 | -1.69E-46 |
| MS.gene055942 | MS.gene55697 | 0.852339 | 4.93E-61 | -1.69E-46 |
| MS.gene056046 | MS.gene55697 | -0.804534 | 2.06E-49 | -1.69E-46 |
| MS.gene056198 | MS.gene55697 | 0.833572 | 4.94E-56 | -1.69E-46 |
| MS.gene056224 | MS.gene55697 | 0.826426 | 2.73E-54 | -1.69E-46 |
| MS.gene056298 | MS.gene55697 | 0.809272 | 2.05E-50 | -1.69E-46 |
| MS.gene056310 | MS.gene55697 | 0.800164 | 1.64E-48 | -1.69E-46 |
| MS.gene056311 | MS.gene55697 | 0.833413 | 5.41E-56 | -1.69E-46 |
| MS.gene056313 | MS.gene55697 | 0.801471 | 8.87E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene55697 | -0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene056387 | MS.gene55697 | -0.802063 | 6.70E-49 | -1.69E-46 |
| MS.gene056409 | MS.gene55697 | -0.800584 | 1.35E-48 | -1.69E-46 |
| MS.gene056504 | MS.gene55697 | -0.882502 | 9.87E-71 | -1.69E-46 |
| MS.gene056510 | MS.gene55697 | -0.834289 | 3.27E-56 | -1.69E-46 |
| MS.gene056549 | MS.gene55697 | -0.801999 | 6.91E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene55697 | -0.854038 | 1.61E-61 | -1.69E-46 |
| MS.gene056692 | MS.gene55697 | -0.826822 | 2.20E-54 | -1.69E-46 |
| MS.gene056856 | MS.gene55697 | 0.855345 | 6.72E-62 | -1.69E-46 |
| MS.gene056857 | MS.gene55697 | 0.810828 | 9.49E-51 | -1.69E-46 |
| MS.gene056946 | MS.gene55697 | -0.817709 | 2.87E-52 | -1.69E-46 |
| MS.gene056988 | MS.gene55697 | 0.803048 | 4.20E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene55697 | 0.855158 | 7.61E-62 | -1.69E-46 |
| MS.gene057261 | MS.gene55697 | 0.8009 | 1.16E-48 | -1.69E-46 |
| MS.gene057473 | MS.gene55697 | 0.82925 | 5.72E-55 | -1.69E-46 |
| MS.gene057499 | MS.gene55697 | 0.80972 | 1.65E-50 | -1.69E-46 |
| MS.gene057547 | MS.gene55697 | 0.803224 | 3.86E-49 | -1.69E-46 |
| MS.gene057548 | MS.gene55697 | 0.81254 | 4.03E-51 | -1.69E-46 |
| MS.gene057549 | MS.gene55697 | 0.821747 | 3.43E-53 | -1.69E-46 |
| MS.gene057768 | MS.gene55697 | 0.827076 | 1.91E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene55697 | -0.822583 | 2.19E-53 | -1.69E-46 |
| MS.gene057857 | MS.gene55697 | -0.801696 | 7.97E-49 | -1.69E-46 |
| MS.gene058067 | MS.gene55697 | 0.824195 | 9.20E-54 | -1.69E-46 |
| MS.gene058068 | MS.gene55697 | 0.880317 | 6.06E-70 | -1.69E-46 |
| MS.gene058093 | MS.gene55697 | 0.8174 | 3.36E-52 | -1.69E-46 |
| MS.gene058099 | MS.gene55697 | 0.868652 | 5.57E-66 | -1.69E-46 |
| MS.gene058108 | MS.gene55697 | 0.802178 | 6.35E-49 | -1.69E-46 |
| MS.gene058109 | MS.gene55697 | 0.831328 | 1.78E-55 | -1.69E-46 |
| MS.gene058111 | MS.gene55697 | 0.859229 | 4.78E-63 | -1.69E-46 |
| MS.gene058117 | MS.gene55697 | 0.827436 | 1.57E-54 | -1.69E-46 |
| MS.gene058157 | MS.gene55697 | -0.859542 | 3.85E-63 | -1.69E-46 |
| MS.gene058171 | MS.gene55697 | 0.863189 | 2.97E-64 | -1.69E-46 |
| MS.gene058173 | MS.gene55697 | 0.852703 | 3.88E-61 | -1.69E-46 |
| MS.gene058175 | MS.gene55697 | 0.865229 | 6.87E-65 | -1.69E-46 |
| MS.gene058268 | MS.gene55697 | 0.844096 | 9.34E-59 | -1.69E-46 |
| MS.gene058269 | MS.gene55697 | 0.846725 | 1.81E-59 | -1.69E-46 |
| MS.gene058334 | MS.gene55697 | 0.806845 | 6.75E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene55697 | -0.82247 | 2.33E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene55697 | -0.871416 | 6.95E-67 | -1.69E-46 |
| MS.gene058419 | MS.gene55697 | -0.856124 | 3.98E-62 | -1.69E-46 |
| MS.gene058493 | MS.gene55697 | 0.839222 | 1.80E-57 | -1.69E-46 |
| MS.gene058494 | MS.gene55697 | 0.811734 | 6.04E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene55697 | -0.831392 | 1.71E-55 | -1.69E-46 |
| MS.gene058603 | MS.gene55697 | 0.847984 | 8.18E-60 | -1.69E-46 |
| MS.gene058723 | MS.gene55697 | -0.80132 | 9.52E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene55697 | -0.852124 | 5.67E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene55697 | -0.816492 | 5.38E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene55697 | -0.885651 | 6.77E-72 | -1.69E-46 |
| MS.gene059023 | MS.gene55697 | -0.841262 | 5.29E-58 | -1.69E-46 |
| MS.gene059037 | MS.gene55697 | 0.816988 | 4.16E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene55697 | 0.809881 | 1.52E-50 | -1.69E-46 |
| MS.gene059223 | MS.gene55697 | 0.835778 | 1.38E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene55697 | -0.811023 | 8.62E-51 | -1.69E-46 |
| MS.gene059479 | MS.gene55697 | 0.802221 | 6.22E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene55697 | -0.853366 | 2.51E-61 | -1.69E-46 |
| MS.gene059699 | MS.gene55697 | 0.827002 | 1.99E-54 | -1.69E-46 |
| MS.gene059701 | MS.gene55697 | 0.816112 | 6.54E-52 | -1.69E-46 |
| MS.gene059703 | MS.gene55697 | 0.838521 | 2.74E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene55697 | -0.844504 | 7.26E-59 | -1.69E-46 |
| MS.gene059756 | MS.gene55697 | -0.819215 | 1.31E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene55697 | -0.82732 | 1.67E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene55697 | -0.864588 | 1.09E-64 | -1.69E-46 |
| MS.gene059902 | MS.gene55697 | -0.830253 | 3.26E-55 | -1.69E-46 |
| MS.gene059916 | MS.gene55697 | 0.822927 | 1.82E-53 | -1.69E-46 |
| MS.gene059953 | MS.gene55697 | 0.800644 | 1.31E-48 | -1.69E-46 |
| MS.gene059955 | MS.gene55697 | 0.822127 | 2.80E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene55697 | -0.833361 | 5.57E-56 | -1.69E-46 |
| MS.gene060187 | MS.gene55697 | 0.806401 | 8.37E-50 | -1.69E-46 |
| MS.gene060405 | MS.gene55697 | 0.808455 | 3.07E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene55697 | -0.8248 | 6.63E-54 | -1.69E-46 |
| MS.gene060593 | MS.gene55697 | 0.829469 | 5.06E-55 | -1.69E-46 |
| MS.gene060595 | MS.gene55697 | 0.873969 | 9.74E-68 | -1.69E-46 |
| MS.gene060602 | MS.gene55697 | 0.815717 | 8.01E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene55697 | -0.836343 | 9.89E-57 | -1.69E-46 |
| MS.gene060762 | MS.gene55697 | -0.851487 | 8.60E-61 | -1.69E-46 |
| MS.gene060778 | MS.gene55697 | -0.851527 | 8.38E-61 | -1.69E-46 |
| MS.gene06077 | MS.gene55697 | -0.884025 | 2.73E-71 | -1.69E-46 |
| MS.gene060823 | MS.gene55697 | 0.809649 | 1.70E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene55697 | -0.844993 | 5.36E-59 | -1.69E-46 |
| MS.gene061150 | MS.gene55697 | -0.822542 | 2.24E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 102 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCTTCAAAGACATGAAATT+TGG | 0.144802 | 3.3:+56971227 | MS.gene55697:CDS |
| TTCATGGTGTCTTATGTTAT+TGG | 0.181924 | 3.3:+56970688 | MS.gene55697:CDS |
| TGCATACAAATCCTGAAATA+TGG | 0.200587 | 3.3:+56971300 | MS.gene55697:CDS |
| TATTGGCCTCAAATCATAAT+TGG | 0.249286 | 3.3:+56970705 | MS.gene55697:CDS |
| GCATCATCTCCCCATATTTC+AGG | 0.250754 | 3.3:-56971311 | None:intergenic |
| GTGAATCTCTTGTAAACTTC+TGG | 0.265061 | 3.3:+56970128 | MS.gene55697:CDS |
| ACCTTATCTATGTAAAATTC+TGG | 0.276440 | 3.3:-56969450 | None:intergenic |
| CCCAAATTTCATGTCTTTGA+AGG | 0.305913 | 3.3:-56971228 | None:intergenic |
| TTCATTTCACAAGGAACTAA+TGG | 0.315006 | 3.3:+56969356 | MS.gene55697:CDS |
| TTTGAAAGCATATCAGAATT+CGG | 0.315866 | 3.3:-56970776 | None:intergenic |
| TCCAAGAAGTTGTCTGTTCC+TGG | 0.317462 | 3.3:+56970296 | MS.gene55697:CDS |
| CAACCGCAGTTGTTGCTTCA+TGG | 0.328605 | 3.3:+56970672 | MS.gene55697:CDS |
| TCCAGGAACAGACAACTTCT+TGG | 0.334199 | 3.3:-56970297 | None:intergenic |
| AATCTCTCTTCGGCAGTTCC+TGG | 0.336584 | 3.3:+56970322 | MS.gene55697:CDS |
| GTGATTTCTTTCACTATGTC+TGG | 0.345287 | 3.3:-56969303 | None:intergenic |
| TCTCTCTGGGTTGAATTTGT+AGG | 0.347883 | 3.3:-56971333 | None:intergenic |
| TTGAAAGCATATCAGAATTC+GGG | 0.352379 | 3.3:-56970775 | None:intergenic |
| AGAGGTGAAAAGTTTGATAA+TGG | 0.358923 | 3.3:+56970496 | MS.gene55697:CDS |
| GTTATTTCAAGAGCATGTTT+TGG | 0.367785 | 3.3:+56970226 | MS.gene55697:CDS |
| CACATGCACTTCTTTCGACT+TGG | 0.368858 | 3.3:+56969326 | MS.gene55697:CDS |
| TCATTTCACAAGGAACTAAT+GGG | 0.369983 | 3.3:+56969357 | MS.gene55697:CDS |
| GTTCCATTAGCAAATCTCTC+TGG | 0.370543 | 3.3:-56971347 | None:intergenic |
| AGAGAGGGAGAAAGAGAAGT+TGG | 0.371924 | 3.3:-56971486 | None:intergenic |
| CCTTCAAAGACATGAAATTT+GGG | 0.377485 | 3.3:+56971228 | MS.gene55697:CDS |
| AAGGCTTGCCTTGACAATAA+AGG | 0.379436 | 3.3:-56971209 | None:intergenic |
| ATCTTGCCAATTATGATTTG+AGG | 0.391468 | 3.3:-56970711 | None:intergenic |
| ATAAAGGTGCAGGTGGATAA+AGG | 0.403737 | 3.3:-56971193 | None:intergenic |
| GGAACTAATGGGGCCATTGT+TGG | 0.410907 | 3.3:+56969368 | MS.gene55697:CDS |
| GCATACAAATCCTGAAATAT+GGG | 0.414487 | 3.3:+56971301 | MS.gene55697:CDS |
| TTTGGAAGTGATTATTCAAA+GGG | 0.432024 | 3.3:+56970244 | MS.gene55697:CDS |
| GAGGACATGAGAAAATTGTC+AGG | 0.435304 | 3.3:+56970199 | MS.gene55697:CDS |
| AACCCAGAGAGATTTGCTAA+TGG | 0.437259 | 3.3:+56971344 | MS.gene55697:CDS |
| TGCAATTATCAACAATAAAA+CGG | 0.437351 | 3.3:-56970622 | None:intergenic |
| TTTCAATAACCATTTGCAAC+AGG | 0.437521 | 3.3:-56970562 | None:intergenic |
| TATGCTTTCAAAGATGAAAC+AGG | 0.440015 | 3.3:+56970787 | MS.gene55697:CDS |
| TCCCTAAGGGCACTGAACTT+TGG | 0.446875 | 3.3:+56971261 | MS.gene55697:CDS |
| GAACTAATGGGGCCATTGTT+GGG | 0.452961 | 3.3:+56969369 | MS.gene55697:CDS |
| CACTTCTTTCGACTTGGGGA+AGG | 0.460172 | 3.3:+56969332 | MS.gene55697:CDS |
| TGGAACTGCTGGTGCTTGTA+AGG | 0.462843 | 3.3:+56971364 | MS.gene55697:CDS |
| TTTCTTTCACTATGTCTGGT+TGG | 0.463522 | 3.3:-56969299 | None:intergenic |
| ACATGCACTTCTTTCGACTT+GGG | 0.464630 | 3.3:+56969327 | MS.gene55697:CDS |
| ATCCAAAGTTCAGTGCCCTT+AGG | 0.469515 | 3.3:-56971263 | None:intergenic |
| ATAGCTTTCTTACTACTAGC+TGG | 0.471031 | 3.3:-56971565 | None:intergenic |
| TCCAAAGTTCAGTGCCCTTA+GGG | 0.473423 | 3.3:-56971262 | None:intergenic |
| CCACACGTATATATGCCATT+TGG | 0.474195 | 3.3:+56971389 | MS.gene55697:CDS |
| ACTCTTGGGCCAACTCCAAA+TGG | 0.478619 | 3.3:-56971404 | None:intergenic |
| CCGAGGTACTAGAAATCTGC+AGG | 0.479418 | 3.3:+56970744 | MS.gene55697:CDS |
| CTGGAGCTAAGAGATGTCTA+TGG | 0.479944 | 3.3:-56969431 | None:intergenic |
| TGCTGTCCAAGACACACTCT+TGG | 0.481519 | 3.3:-56971419 | None:intergenic |
| TGCAAGAATATATACTTGGC+AGG | 0.491645 | 3.3:+56970641 | MS.gene55697:CDS |
| TTCTATTAGTCTTTGTTGGG+AGG | 0.492916 | 3.3:-56970454 | None:intergenic |
| TAACGTCAAGTGGAACTACA+TGG | 0.496013 | 3.3:+56969403 | MS.gene55697:CDS |
| CTTCTGGAGTAGTAAAATAG+AGG | 0.502860 | 3.3:+56970144 | MS.gene55697:CDS |
| CCTGCAGATTTCTAGTACCT+CGG | 0.508314 | 3.3:-56970744 | None:intergenic |
| TTTGATAATGGAAGTGGTGA+AGG | 0.509241 | 3.3:+56970508 | MS.gene55697:CDS |
| TGCCTTGACAATAAAGGTGC+AGG | 0.513316 | 3.3:-56971203 | None:intergenic |
| GTATATATGCCATTTGGAGT+TGG | 0.515678 | 3.3:+56971395 | MS.gene55697:CDS |
| TTCCATTAGCAAATCTCTCT+GGG | 0.516245 | 3.3:-56971346 | None:intergenic |
| CATGCACTTCTTTCGACTTG+GGG | 0.516376 | 3.3:+56969328 | MS.gene55697:CDS |
| GCAGGTGAATGTATGTATCT+TGG | 0.516669 | 3.3:-56971509 | None:intergenic |
| TAATTGCAAGAATATATACT+TGG | 0.518417 | 3.3:+56970637 | MS.gene55697:CDS |
| TGGGAATATTGATGTCCCTA+AGG | 0.518925 | 3.3:+56971247 | MS.gene55697:CDS |
| GCTGTCCAAGACACACTCTT+GGG | 0.525907 | 3.3:-56971418 | None:intergenic |
| AACACTGATTACCTCATGCC+AGG | 0.528667 | 3.3:-56970340 | None:intergenic |
| AATGTATGTATCTTGGAGAG+AGG | 0.542074 | 3.3:-56971502 | None:intergenic |
| CACCTGCACCTTTATTGTCA+AGG | 0.546177 | 3.3:+56971201 | MS.gene55697:CDS |
| AGATTTGCTAATGGAACTGC+TGG | 0.550761 | 3.3:+56971353 | MS.gene55697:CDS |
| ATGTATGTATCTTGGAGAGA+GGG | 0.551688 | 3.3:-56971501 | None:intergenic |
| ACTAGCTGGACTCCATGGTC+AGG | 0.558523 | 3.3:-56971551 | None:intergenic |
| TACATACATTCACCTGCACA+TGG | 0.563271 | 3.3:+56971515 | MS.gene55697:CDS |
| GGGAATATTGATGTCCCTAA+GGG | 0.564789 | 3.3:+56971248 | MS.gene55697:CDS |
| TTACTACTAGCTGGACTCCA+TGG | 0.566216 | 3.3:-56971556 | None:intergenic |
| AGTGTGTCTTGGACAGCACT+TGG | 0.569307 | 3.3:+56971424 | MS.gene55697:CDS |
| ATGGGGCCATTGTTGGGTGA+TGG | 0.581983 | 3.3:+56969375 | MS.gene55697:CDS |
| GAAAAGTTTGATAATGGAAG+TGG | 0.586061 | 3.3:+56970502 | MS.gene55697:CDS |
| AGCTAAGAGATGTCTATGGT+GGG | 0.591309 | 3.3:-56969427 | None:intergenic |
| GAGCTAAGAGATGTCTATGG+TGG | 0.591731 | 3.3:-56969428 | None:intergenic |
| GTTGGCCCAAGAGTGTGTCT+TGG | 0.600757 | 3.3:+56971413 | MS.gene55697:CDS |
| GCAAGATCGTGCTCGTGCCG+AGG | 0.604322 | 3.3:+56970727 | MS.gene55697:CDS |
| GGGGAAGGCTTCATTTCACA+AGG | 0.604979 | 3.3:+56969347 | MS.gene55697:CDS |
| TGGAAGTGATTATTCAAAGG+GGG | 0.605932 | 3.3:+56970246 | MS.gene55697:CDS |
| CATACAAATCCTGAAATATG+GGG | 0.606270 | 3.3:+56971302 | MS.gene55697:CDS |
| CTTCGGCAGTTCCTGGCATG+AGG | 0.608181 | 3.3:+56970329 | MS.gene55697:CDS |
| CAAAGACTAATAGAAAAGCA+TGG | 0.611057 | 3.3:+56970462 | MS.gene55697:CDS |
| AACGTCAAGTGGAACTACAT+GGG | 0.612415 | 3.3:+56969404 | MS.gene55697:CDS |
| TGCAGATATAAATATTGATG+AGG | 0.616758 | 3.3:+56970180 | MS.gene55697:CDS |
| AAGCATCTTAAGTTCAAGCA+TGG | 0.621644 | 3.3:-56971447 | None:intergenic |
| AAAATACCATCACCCAACAA+TGG | 0.638120 | 3.3:-56969381 | None:intergenic |
| CCAAATGGCATATATACGTG+TGG | 0.639956 | 3.3:-56971389 | None:intergenic |
| TGCAGGTGGATAAAGGCGCA+AGG | 0.645494 | 3.3:-56971186 | None:intergenic |
| AGGACATGAGAAAATTGTCA+GGG | 0.646713 | 3.3:+56970200 | MS.gene55697:CDS |
| AGTAGTAAAATAGAGGCGCA+AGG | 0.655949 | 3.3:+56970151 | MS.gene55697:CDS |
| CGAGGTACTAGAAATCTGCA+GGG | 0.656762 | 3.3:+56970745 | MS.gene55697:CDS |
| CTTGACAATAAAGGTGCAGG+TGG | 0.658963 | 3.3:-56971200 | None:intergenic |
| TTGGAAGTGATTATTCAAAG+GGG | 0.659238 | 3.3:+56970245 | MS.gene55697:CDS |
| CATTTCACAAGGAACTAATG+GGG | 0.668148 | 3.3:+56969358 | MS.gene55697:CDS |
| CAAGTCGAAAGAAGTGCATG+TGG | 0.671805 | 3.3:-56969325 | None:intergenic |
| ACATACATTCACCTGCACAT+GGG | 0.677412 | 3.3:+56971516 | MS.gene55697:CDS |
| GCATGCAATGCAGCTAACAA+TGG | 0.684570 | 3.3:+56971151 | MS.gene55697:intron |
| ACACCATGAAGCAACAACTG+CGG | 0.736335 | 3.3:-56970675 | None:intergenic |
| GAGGTACTAGAAATCTGCAG+GGG | 0.739793 | 3.3:+56970746 | MS.gene55697:CDS |
| AGTAAAATAGAGGCGCAAGG+CGG | 0.745436 | 3.3:+56970154 | MS.gene55697:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTGATTGATTAAAAATA+AGG | - | chr3.3:56970403-56970422 | None:intergenic | 10.0% |
| !! | GAAACTATAAAATAAAAAAT+AGG | - | chr3.3:56969591-56969610 | None:intergenic | 10.0% |
| !!! | ATTTTTAATCAATCAAATTA+AGG | + | chr3.3:56970404-56970423 | MS.gene55697:intron | 10.0% |
| !!! | AAGTCAATATTTTTTGTTAT+TGG | - | chr3.3:56970863-56970882 | None:intergenic | 15.0% |
| !!! | ACATTAAATGGTTTAAAATA+TGG | - | chr3.3:56969628-56969647 | None:intergenic | 15.0% |
| !! | AAAAAAATGAAACCCTAATT+TGG | - | chr3.3:56969769-56969788 | None:intergenic | 20.0% |
| !! | AAAAAATGAAACCCTAATTT+GGG | - | chr3.3:56969768-56969787 | None:intergenic | 20.0% |
| !! | AAAATATGGAAGAAATTGAA+AGG | - | chr3.3:56969614-56969633 | None:intergenic | 20.0% |
| !! | AAATATGGAAGAAATTGAAA+GGG | - | chr3.3:56969613-56969632 | None:intergenic | 20.0% |
| !! | TAATTGCAAGAATATATACT+TGG | + | chr3.3:56970637-56970656 | MS.gene55697:CDS | 20.0% |
| !! | TGCAATTATCAACAATAAAA+CGG | - | chr3.3:56970625-56970644 | None:intergenic | 20.0% |
| !! | TTATACAATTGGAGAAATTT+CGG | + | chr3.3:56969871-56969890 | MS.gene55697:intron | 20.0% |
| !!! | AAAAAATAGGAAAGCATTAA+GGG | - | chr3.3:56969578-56969597 | None:intergenic | 20.0% |
| !!! | AAACTATTCATGTTTTCTTT+TGG | + | chr3.3:56969252-56969271 | MS.gene55697:CDS | 20.0% |
| !!! | ATTTTACATAGATAAGGTTA+AGG | + | chr3.3:56969455-56969474 | MS.gene55697:CDS | 20.0% |
| !!! | GAACAAATTTTCTTAAAACT+TGG | + | chr3.3:56970268-56970287 | MS.gene55697:CDS | 20.0% |
| !!! | TAAAAAATAGGAAAGCATTA+AGG | - | chr3.3:56969579-56969598 | None:intergenic | 20.0% |
| !!! | TCTTTGAAATTAAAACGAAA+AGG | + | chr3.3:56969703-56969722 | MS.gene55697:intron | 20.0% |
| !!! | TTTTTGTTATTGGAAAAACT+AGG | - | chr3.3:56970853-56970872 | None:intergenic | 20.0% |
| ! | ACCTTATCTATGTAAAATTC+TGG | - | chr3.3:56969453-56969472 | None:intergenic | 25.0% |
| ! | ACTTACTTTCGTATTCAAAT+TGG | + | chr3.3:56970908-56970927 | MS.gene55697:intron | 25.0% |
| ! | ATAAATGCTGTCACATTAAA+TGG | - | chr3.3:56969640-56969659 | None:intergenic | 25.0% |
| ! | ATTTCTCCAATTGTATAAGT+TGG | - | chr3.3:56969869-56969888 | None:intergenic | 25.0% |
| ! | GAAAAATCACTCAAAAAAAG+AGG | + | chr3.3:56969934-56969953 | MS.gene55697:intron | 25.0% |
| ! | TATACAATTGGAGAAATTTC+GGG | + | chr3.3:56969872-56969891 | MS.gene55697:intron | 25.0% |
| ! | TGCAGATATAAATATTGATG+AGG | + | chr3.3:56970180-56970199 | MS.gene55697:CDS | 25.0% |
| ! | TTTGGAAGTGATTATTCAAA+GGG | + | chr3.3:56970244-56970263 | MS.gene55697:CDS | 25.0% |
| !! | AAAACTAGGAATCATTTTGA+TGG | - | chr3.3:56970839-56970858 | None:intergenic | 25.0% |
| !! | CTAATTAAACTTGTTTGTTG+TGG | + | chr3.3:56971129-56971148 | MS.gene55697:intron | 25.0% |
| !! | TCCAGAATTTTACATAGATA+AGG | + | chr3.3:56969449-56969468 | MS.gene55697:CDS | 25.0% |
| !! | TTTGAAAGCATATCAGAATT+CGG | - | chr3.3:56970779-56970798 | None:intergenic | 25.0% |
| !!! | CAATTGTACTTGTTGATTTT+TGG | - | chr3.3:56969731-56969750 | None:intergenic | 25.0% |
| !!! | CTTTTCTATTAGTCTTTGTT+GGG | - | chr3.3:56970460-56970479 | None:intergenic | 25.0% |
| !!! | TTGTGTGATATTACTTTTCT+TGG | - | chr3.3:56970591-56970610 | None:intergenic | 25.0% |
| !!! | TTTTGGAAGTGATTATTCAA+AGG | + | chr3.3:56970243-56970262 | MS.gene55697:CDS | 25.0% |
| AAATCACTCAAAAAAAGAGG+TGG | + | chr3.3:56969937-56969956 | MS.gene55697:intron | 30.0% | |
| ACATAGATAAGGTTAAGGTA+AGG | + | chr3.3:56969460-56969479 | MS.gene55697:intron | 30.0% | |
| AGAGGTGAAAAGTTTGATAA+TGG | + | chr3.3:56970496-56970515 | MS.gene55697:CDS | 30.0% | |
| AGCATGGATATTAGAAAAAG+AGG | + | chr3.3:56970478-56970497 | MS.gene55697:CDS | 30.0% | |
| AGCCATAAGAATCAAAATGA+CGG | - | chr3.3:56971069-56971088 | None:intergenic | 30.0% | |
| ATCTTGCCAATTATGATTTG+AGG | - | chr3.3:56970714-56970733 | None:intergenic | 30.0% | |
| ATGAAGCCAACTTATACAAT+TGG | + | chr3.3:56969860-56969879 | MS.gene55697:intron | 30.0% | |
| CAAAGACTAATAGAAAAGCA+TGG | + | chr3.3:56970462-56970481 | MS.gene55697:CDS | 30.0% | |
| CAAAGGGTGAAAATATAAAG+AGG | + | chr3.3:56969912-56969931 | MS.gene55697:intron | 30.0% | |
| CATACAAATCCTGAAATATG+GGG | + | chr3.3:56971302-56971321 | MS.gene55697:CDS | 30.0% | |
| CATTAATCGATAGACTGAAA+TGG | - | chr3.3:56970960-56970979 | None:intergenic | 30.0% | |
| CCTTCAAAGACATGAAATTT+GGG | + | chr3.3:56971228-56971247 | MS.gene55697:CDS | 30.0% | |
| GACATATTTAGAGACTAACT+TGG | + | chr3.3:56971021-56971040 | MS.gene55697:intron | 30.0% | |
| GCATACAAATCCTGAAATAT+GGG | + | chr3.3:56971301-56971320 | MS.gene55697:CDS | 30.0% | |
| TACTACATATGTCTTCCAAA+GGG | + | chr3.3:56970079-56970098 | MS.gene55697:intron | 30.0% | |
| TATGCTTTCAAAGATGAAAC+AGG | + | chr3.3:56970787-56970806 | MS.gene55697:CDS | 30.0% | |
| TCATTTCACAAGGAACTAAT+GGG | + | chr3.3:56969357-56969376 | MS.gene55697:CDS | 30.0% | |
| TGCATACAAATCCTGAAATA+TGG | + | chr3.3:56971300-56971319 | MS.gene55697:CDS | 30.0% | |
| TTACTACATATGTCTTCCAA+AGG | + | chr3.3:56970078-56970097 | MS.gene55697:intron | 30.0% | |
| TTCATGGTGTCTTATGTTAT+TGG | + | chr3.3:56970688-56970707 | MS.gene55697:CDS | 30.0% | |
| TTCATTTCACAAGGAACTAA+TGG | + | chr3.3:56969356-56969375 | MS.gene55697:CDS | 30.0% | |
| TTGGAAGTGATTATTCAAAG+GGG | + | chr3.3:56970245-56970264 | MS.gene55697:CDS | 30.0% | |
| TTTCAATAACCATTTGCAAC+AGG | - | chr3.3:56970565-56970584 | None:intergenic | 30.0% | |
| ! | TATCACAATTTGCCTGATTT+TGG | - | chr3.3:56969963-56969982 | None:intergenic | 30.0% |
| ! | TATTGGCCTCAAATCATAAT+TGG | + | chr3.3:56970705-56970724 | MS.gene55697:CDS | 30.0% |
| ! | TTGAAAGCATATCAGAATTC+GGG | - | chr3.3:56970778-56970797 | None:intergenic | 30.0% |
| !! | GAAAAGTTTGATAATGGAAG+TGG | + | chr3.3:56970502-56970521 | MS.gene55697:CDS | 30.0% |
| !! | GTTATTTCAAGAGCATGTTT+TGG | + | chr3.3:56970226-56970245 | MS.gene55697:CDS | 30.0% |
| !!! | GCTTTTCTATTAGTCTTTGT+TGG | - | chr3.3:56970461-56970480 | None:intergenic | 30.0% |
| AAAATACCATCACCCAACAA+TGG | - | chr3.3:56969384-56969403 | None:intergenic | 35.0% | |
| AAGCATCTTAAGTTCAAGCA+TGG | - | chr3.3:56971450-56971469 | None:intergenic | 35.0% | |
| AATGTATGTATCTTGGAGAG+AGG | - | chr3.3:56971505-56971524 | None:intergenic | 35.0% | |
| ACAATATTCACCATTCCCTT+TGG | - | chr3.3:56970097-56970116 | None:intergenic | 35.0% | |
| ACGAGACTATCAAATCACAA+AGG | + | chr3.3:56969895-56969914 | MS.gene55697:intron | 35.0% | |
| AGGACATGAGAAAATTGTCA+GGG | + | chr3.3:56970200-56970219 | MS.gene55697:CDS | 35.0% | |
| ATAGCTTTCTTACTACTAGC+TGG | - | chr3.3:56971568-56971587 | None:intergenic | 35.0% | |
| ATCCCACAACTGCTATATTT+AGG | - | chr3.3:56969522-56969541 | None:intergenic | 35.0% | |
| ATGTATGTATCTTGGAGAGA+GGG | - | chr3.3:56971504-56971523 | None:intergenic | 35.0% | |
| CATTTCACAAGGAACTAATG+GGG | + | chr3.3:56969358-56969377 | MS.gene55697:CDS | 35.0% | |
| CCCAAATTTCATGTCTTTGA+AGG | - | chr3.3:56971231-56971250 | None:intergenic | 35.0% | |
| CGAGACTATCAAATCACAAA+GGG | + | chr3.3:56969896-56969915 | MS.gene55697:intron | 35.0% | |
| GCCTTCAAAGACATGAAATT+TGG | + | chr3.3:56971227-56971246 | MS.gene55697:CDS | 35.0% | |
| GTGAATCTCTTGTAAACTTC+TGG | + | chr3.3:56970128-56970147 | MS.gene55697:CDS | 35.0% | |
| GTGATTTCTTTCACTATGTC+TGG | - | chr3.3:56969306-56969325 | None:intergenic | 35.0% | |
| TCCCACAACTGCTATATTTA+GGG | - | chr3.3:56969521-56969540 | None:intergenic | 35.0% | |
| TGAAAAAGACCTGTTGCAAA+TGG | + | chr3.3:56970553-56970572 | MS.gene55697:CDS | 35.0% | |
| TGCAAGAATATATACTTGGC+AGG | + | chr3.3:56970641-56970660 | MS.gene55697:CDS | 35.0% | |
| TGGAAGTGATTATTCAAAGG+GGG | + | chr3.3:56970246-56970265 | MS.gene55697:CDS | 35.0% | |
| TGTGACAGCATTTATTGACA+TGG | + | chr3.3:56969645-56969664 | MS.gene55697:intron | 35.0% | |
| TTCCATTAGCAAATCTCTCT+GGG | - | chr3.3:56971349-56971368 | None:intergenic | 35.0% | |
| TTCCTGGAAAAATCTCTCTT+CGG | + | chr3.3:56970312-56970331 | MS.gene55697:CDS | 35.0% | |
| TTTCTTTCACTATGTCTGGT+TGG | - | chr3.3:56969302-56969321 | None:intergenic | 35.0% | |
| ! | AAGAGTGTAAGTCAATCAAG+AGG | - | chr3.3:56970050-56970069 | None:intergenic | 35.0% |
| ! | ATATAGCAGTTGTGGGATTT+TGG | + | chr3.3:56969524-56969543 | MS.gene55697:intron | 35.0% |
| ! | GTATATATGCCATTTGGAGT+TGG | + | chr3.3:56971395-56971414 | MS.gene55697:CDS | 35.0% |
| !! | CTTCTGGAGTAGTAAAATAG+AGG | + | chr3.3:56970144-56970163 | MS.gene55697:CDS | 35.0% |
| !! | TTCTATTAGTCTTTGTTGGG+AGG | - | chr3.3:56970457-56970476 | None:intergenic | 35.0% |
| !! | TTTGATAATGGAAGTGGTGA+AGG | + | chr3.3:56970508-56970527 | MS.gene55697:CDS | 35.0% |
| !!! | GACCGTCATTTTGATTCTTA+TGG | + | chr3.3:56971064-56971083 | MS.gene55697:intron | 35.0% |
| !!! | GATGGTATTTTAACGTCAAG+TGG | + | chr3.3:56969393-56969412 | MS.gene55697:CDS | 35.0% |
| AAAAAGAGGTGGCCAAAATC+AGG | + | chr3.3:56969948-56969967 | MS.gene55697:intron | 40.0% | |
| AACGTCAAGTGGAACTACAT+GGG | + | chr3.3:56969404-56969423 | MS.gene55697:CDS | 40.0% | |
| AAGGCTTGCCTTGACAATAA+AGG | - | chr3.3:56971212-56971231 | None:intergenic | 40.0% | |
| ACATACATTCACCTGCACAT+GGG | + | chr3.3:56971516-56971535 | MS.gene55697:CDS | 40.0% | |
| ACATGCACTTCTTTCGACTT+GGG | + | chr3.3:56969327-56969346 | MS.gene55697:CDS | 40.0% | |
| ACATGGAACCAAACTCTCAT+CGG | + | chr3.3:56969662-56969681 | MS.gene55697:intron | 40.0% | |
| ACCCCTAAATATAGCAGTTG+TGG | + | chr3.3:56969516-56969535 | MS.gene55697:intron | 40.0% | |
| AGAATCAAAATGACGGTCAC+TGG | - | chr3.3:56971062-56971081 | None:intergenic | 40.0% | |
| AGCTAAGAGATGTCTATGGT+GGG | - | chr3.3:56969430-56969449 | None:intergenic | 40.0% | |
| CAAGACAATTTGCAAAGTCG+AGG | + | chr3.3:56970999-56971018 | MS.gene55697:intron | 40.0% | |
| CATATGTCTTCCAAAGGGAA+TGG | + | chr3.3:56970084-56970103 | MS.gene55697:intron | 40.0% | |
| CCAAATGGCATATATACGTG+TGG | - | chr3.3:56971392-56971411 | None:intergenic | 40.0% | |
| CCACACGTATATATGCCATT+TGG | + | chr3.3:56971389-56971408 | MS.gene55697:CDS | 40.0% | |
| CCCACAACTGCTATATTTAG+GGG | - | chr3.3:56969520-56969539 | None:intergenic | 40.0% | |
| CCCCTAAATATAGCAGTTGT+GGG | + | chr3.3:56969517-56969536 | MS.gene55697:intron | 40.0% | |
| GAGGACATGAGAAAATTGTC+AGG | + | chr3.3:56970199-56970218 | MS.gene55697:CDS | 40.0% | |
| GCAGGTGAATGTATGTATCT+TGG | - | chr3.3:56971512-56971531 | None:intergenic | 40.0% | |
| GGGAATATTGATGTCCCTAA+GGG | + | chr3.3:56971248-56971267 | MS.gene55697:CDS | 40.0% | |
| GTTCCATTAGCAAATCTCTC+TGG | - | chr3.3:56971350-56971369 | None:intergenic | 40.0% | |
| TAACGTCAAGTGGAACTACA+TGG | + | chr3.3:56969403-56969422 | MS.gene55697:CDS | 40.0% | |
| TACACATACCGATGAGAGTT+TGG | - | chr3.3:56969673-56969692 | None:intergenic | 40.0% | |
| TACATACATTCACCTGCACA+TGG | + | chr3.3:56971515-56971534 | MS.gene55697:CDS | 40.0% | |
| TGGGAATATTGATGTCCCTA+AGG | + | chr3.3:56971247-56971266 | MS.gene55697:CDS | 40.0% | |
| TTCACTAAAAACCCATGTGC+AGG | - | chr3.3:56971530-56971549 | None:intergenic | 40.0% | |
| ! | AGTAGTAAAATAGAGGCGCA+AGG | + | chr3.3:56970151-56970170 | MS.gene55697:CDS | 40.0% |
| ! | ATAAAGGTGCAGGTGGATAA+AGG | - | chr3.3:56971196-56971215 | None:intergenic | 40.0% |
| ! | TCTCTCTGGGTTGAATTTGT+AGG | - | chr3.3:56971336-56971355 | None:intergenic | 40.0% |
| !! | AACCCAGAGAGATTTGCTAA+TGG | + | chr3.3:56971344-56971363 | MS.gene55697:CDS | 40.0% |
| !! | AGATTTGCTAATGGAACTGC+TGG | + | chr3.3:56971353-56971372 | MS.gene55697:CDS | 40.0% |
| !! | TTGTTGGGAGGTATCTGTTA+AGG | - | chr3.3:56970445-56970464 | None:intergenic | 40.0% |
| !! | TTTTTAGTGAAGCCTGACCA+TGG | + | chr3.3:56971539-56971558 | MS.gene55697:CDS | 40.0% |
| ACACCATGAAGCAACAACTG+CGG | - | chr3.3:56970678-56970697 | None:intergenic | 45.0% | |
| AGAGAGGGAGAAAGAGAAGT+TGG | - | chr3.3:56971489-56971508 | None:intergenic | 45.0% | |
| ATCCAAAGTTCAGTGCCCTT+AGG | - | chr3.3:56971266-56971285 | None:intergenic | 45.0% | |
| CACATGCACTTCTTTCGACT+TGG | + | chr3.3:56969326-56969345 | MS.gene55697:CDS | 45.0% | |
| CACCTGCACCTTTATTGTCA+AGG | + | chr3.3:56971201-56971220 | MS.gene55697:CDS | 45.0% | |
| CTGGAGCTAAGAGATGTCTA+TGG | - | chr3.3:56969434-56969453 | None:intergenic | 45.0% | |
| GAACTAATGGGGCCATTGTT+GGG | + | chr3.3:56969369-56969388 | MS.gene55697:CDS | 45.0% | |
| GAGCTAAGAGATGTCTATGG+TGG | - | chr3.3:56969431-56969450 | None:intergenic | 45.0% | |
| GCATCATCTCCCCATATTTC+AGG | - | chr3.3:56971314-56971333 | None:intergenic | 45.0% | |
| GCATGCAATGCAGCTAACAA+TGG | + | chr3.3:56971151-56971170 | MS.gene55697:intron | 45.0% | |
| GCGAGCGAAATCCCAAATTA+GGG | + | chr3.3:56969754-56969773 | MS.gene55697:intron | 45.0% | |
| TCCAAAGTTCAGTGCCCTTA+GGG | - | chr3.3:56971265-56971284 | None:intergenic | 45.0% | |
| TCCAAGAAGTTGTCTGTTCC+TGG | + | chr3.3:56970296-56970315 | MS.gene55697:CDS | 45.0% | |
| TCCAGGAACAGACAACTTCT+TGG | - | chr3.3:56970300-56970319 | None:intergenic | 45.0% | |
| TGCGAGCGAAATCCCAAATT+AGG | + | chr3.3:56969753-56969772 | MS.gene55697:intron | 45.0% | |
| TTACTACTAGCTGGACTCCA+TGG | - | chr3.3:56971559-56971578 | None:intergenic | 45.0% | |
| ! | AACACTGATTACCTCATGCC+AGG | - | chr3.3:56970343-56970362 | None:intergenic | 45.0% |
| ! | AGTAAAATAGAGGCGCAAGG+CGG | + | chr3.3:56970154-56970173 | MS.gene55697:CDS | 45.0% |
| ! | CAAGTCGAAAGAAGTGCATG+TGG | - | chr3.3:56969328-56969347 | None:intergenic | 45.0% |
| ! | CATGCACTTCTTTCGACTTG+GGG | + | chr3.3:56969328-56969347 | MS.gene55697:CDS | 45.0% |
| ! | CGAGGTACTAGAAATCTGCA+GGG | + | chr3.3:56970745-56970764 | MS.gene55697:CDS | 45.0% |
| ! | CTTGACAATAAAGGTGCAGG+TGG | - | chr3.3:56971203-56971222 | None:intergenic | 45.0% |
| ! | GAGGTACTAGAAATCTGCAG+GGG | + | chr3.3:56970746-56970765 | MS.gene55697:CDS | 45.0% |
| ! | TGCCGAAGAGAGATTTTTCC+AGG | - | chr3.3:56970317-56970336 | None:intergenic | 45.0% |
| ! | TGCCTTGACAATAAAGGTGC+AGG | - | chr3.3:56971206-56971225 | None:intergenic | 45.0% |
| !! | CCTGCAGATTTCTAGTACCT+CGG | - | chr3.3:56970747-56970766 | None:intergenic | 45.0% |
| !! | AATATTAAAATCTAAAAAAA+GGG | - | chr3.3:56969795-56969814 | None:intergenic | 5.0% |
| !! | TAATATTAAAATCTAAAAAA+AGG | - | chr3.3:56969796-56969815 | None:intergenic | 5.0% |
| AATCTCTCTTCGGCAGTTCC+TGG | + | chr3.3:56970322-56970341 | MS.gene55697:CDS | 50.0% | |
| ACTCTTGGGCCAACTCCAAA+TGG | - | chr3.3:56971407-56971426 | None:intergenic | 50.0% | |
| AGTGTGTCTTGGACAGCACT+TGG | + | chr3.3:56971424-56971443 | MS.gene55697:CDS | 50.0% | |
| GCTGTCCAAGACACACTCTT+GGG | - | chr3.3:56971421-56971440 | None:intergenic | 50.0% | |
| GGAACTAATGGGGCCATTGT+TGG | + | chr3.3:56969368-56969387 | MS.gene55697:CDS | 50.0% | |
| GGGGAAGGCTTCATTTCACA+AGG | + | chr3.3:56969347-56969366 | MS.gene55697:CDS | 50.0% | |
| TGCTGTCCAAGACACACTCT+TGG | - | chr3.3:56971422-56971441 | None:intergenic | 50.0% | |
| TGGAACTGCTGGTGCTTGTA+AGG | + | chr3.3:56971364-56971383 | MS.gene55697:CDS | 50.0% | |
| ! | CAACCGCAGTTGTTGCTTCA+TGG | + | chr3.3:56970672-56970691 | MS.gene55697:CDS | 50.0% |
| ! | CCGAGGTACTAGAAATCTGC+AGG | + | chr3.3:56970744-56970763 | MS.gene55697:CDS | 50.0% |
| !! | CACTTCTTTCGACTTGGGGA+AGG | + | chr3.3:56969332-56969351 | MS.gene55697:CDS | 50.0% |
| !! | TCCCTAAGGGCACTGAACTT+TGG | + | chr3.3:56971261-56971280 | MS.gene55697:CDS | 50.0% |
| ACTAGCTGGACTCCATGGTC+AGG | - | chr3.3:56971554-56971573 | None:intergenic | 55.0% | |
| ATGGGGCCATTGTTGGGTGA+TGG | + | chr3.3:56969375-56969394 | MS.gene55697:CDS | 55.0% | |
| ! | GTTGGCCCAAGAGTGTGTCT+TGG | + | chr3.3:56971413-56971432 | MS.gene55697:CDS | 55.0% |
| ! | TGCAGGTGGATAAAGGCGCA+AGG | - | chr3.3:56971189-56971208 | None:intergenic | 55.0% |
| !! | ATGACGGTCACTGGCTTTGC+AGG | - | chr3.3:56971053-56971072 | None:intergenic | 55.0% |
| CTTCGGCAGTTCCTGGCATG+AGG | + | chr3.3:56970329-56970348 | MS.gene55697:CDS | 60.0% | |
| GCAAGATCGTGCTCGTGCCG+AGG | + | chr3.3:56970727-56970746 | MS.gene55697:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 56969250 | 56971589 | 56969250 | ID=MS.gene55697 |
| chr3.3 | mRNA | 56969250 | 56971589 | 56969250 | ID=MS.gene55697.t1;Parent=MS.gene55697 |
| chr3.3 | exon | 56969250 | 56969476 | 56969250 | ID=MS.gene55697.t1.exon1;Parent=MS.gene55697.t1 |
| chr3.3 | CDS | 56969250 | 56969476 | 56969250 | ID=cds.MS.gene55697.t1;Parent=MS.gene55697.t1 |
| chr3.3 | exon | 56970100 | 56970350 | 56970100 | ID=MS.gene55697.t1.exon2;Parent=MS.gene55697.t1 |
| chr3.3 | CDS | 56970100 | 56970350 | 56970100 | ID=cds.MS.gene55697.t1;Parent=MS.gene55697.t1 |
| chr3.3 | exon | 56970451 | 56970808 | 56970451 | ID=MS.gene55697.t1.exon3;Parent=MS.gene55697.t1 |
| chr3.3 | CDS | 56970451 | 56970808 | 56970451 | ID=cds.MS.gene55697.t1;Parent=MS.gene55697.t1 |
| chr3.3 | exon | 56971164 | 56971589 | 56971164 | ID=MS.gene55697.t1.exon4;Parent=MS.gene55697.t1 |
| chr3.3 | CDS | 56971164 | 56971589 | 56971164 | ID=cds.MS.gene55697.t1;Parent=MS.gene55697.t1 |
| Gene Sequence |
| Protein sequence |
