Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21870.t1 | XP_003610852.1 | 98.7 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 4.30E-221 | 776.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21870.t1 | P30075 | 97.9 | 389 | 8 | 0 | 1 | 389 | 1 | 389 | 9.7e-222 | 770.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21870.t1 | G7K6H2 | 98.7 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 3.1e-221 | 776.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene21870 | -0.823038 | 1.72E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene21870 | -0.810123 | 1.35E-50 | -1.69E-46 |
| MS.gene049232 | MS.gene21870 | -0.826041 | 3.37E-54 | -1.69E-46 |
| MS.gene049259 | MS.gene21870 | 0.836867 | 7.28E-57 | -1.69E-46 |
| MS.gene049281 | MS.gene21870 | 0.818499 | 1.90E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene21870 | -0.802465 | 5.54E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene21870 | -0.837135 | 6.21E-57 | -1.69E-46 |
| MS.gene049611 | MS.gene21870 | 0.827418 | 1.58E-54 | -1.69E-46 |
| MS.gene049634 | MS.gene21870 | 0.810235 | 1.27E-50 | -1.69E-46 |
| MS.gene050082 | MS.gene21870 | 0.824208 | 9.14E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene21870 | -0.810295 | 1.24E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene21870 | -0.816306 | 5.92E-52 | -1.69E-46 |
| MS.gene050216 | MS.gene21870 | -0.805826 | 1.11E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene21870 | -0.821868 | 3.21E-53 | -1.69E-46 |
| MS.gene050333 | MS.gene21870 | -0.803282 | 3.75E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene21870 | 0.86472 | 9.93E-65 | -1.69E-46 |
| MS.gene050496 | MS.gene21870 | -0.826262 | 2.99E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene21870 | -0.852852 | 3.52E-61 | -1.69E-46 |
| MS.gene050518 | MS.gene21870 | -0.807583 | 4.71E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene21870 | -0.835304 | 1.81E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene21870 | -0.853285 | 2.64E-61 | -1.69E-46 |
| MS.gene050675 | MS.gene21870 | -0.823486 | 1.35E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene21870 | -0.825718 | 4.02E-54 | -1.69E-46 |
| MS.gene050832 | MS.gene21870 | 0.839633 | 1.41E-57 | -1.69E-46 |
| MS.gene050833 | MS.gene21870 | 0.832012 | 1.20E-55 | -1.69E-46 |
| MS.gene050868 | MS.gene21870 | -0.817455 | 3.27E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene21870 | -0.81594 | 7.14E-52 | -1.69E-46 |
| MS.gene050883 | MS.gene21870 | 0.937109 | 5.91E-98 | -1.69E-46 |
| MS.gene050986 | MS.gene21870 | -0.825512 | 4.50E-54 | -1.69E-46 |
| MS.gene051044 | MS.gene21870 | 0.833538 | 5.04E-56 | -1.69E-46 |
| MS.gene05104 | MS.gene21870 | 0.823145 | 1.62E-53 | -1.69E-46 |
| MS.gene051127 | MS.gene21870 | 0.871299 | 7.60E-67 | -1.69E-46 |
| MS.gene051138 | MS.gene21870 | 0.823274 | 1.51E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene21870 | -0.804855 | 1.77E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene21870 | 0.862155 | 6.19E-64 | -1.69E-46 |
| MS.gene051366 | MS.gene21870 | 0.852713 | 3.85E-61 | -1.69E-46 |
| MS.gene051367 | MS.gene21870 | 0.850857 | 1.29E-60 | -1.69E-46 |
| MS.gene051410 | MS.gene21870 | 0.841854 | 3.69E-58 | -1.69E-46 |
| MS.gene051422 | MS.gene21870 | 0.832238 | 1.06E-55 | -1.69E-46 |
| MS.gene051651 | MS.gene21870 | 0.811295 | 7.52E-51 | -1.69E-46 |
| MS.gene051863 | MS.gene21870 | 0.80552 | 1.28E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene21870 | 0.822287 | 2.57E-53 | -1.69E-46 |
| MS.gene052211 | MS.gene21870 | 0.804306 | 2.30E-49 | -1.69E-46 |
| MS.gene052329 | MS.gene21870 | 0.810818 | 9.54E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene21870 | -0.83771 | 4.43E-57 | -1.69E-46 |
| MS.gene052486 | MS.gene21870 | -0.839479 | 1.55E-57 | -1.69E-46 |
| MS.gene052606 | MS.gene21870 | 0.815716 | 8.02E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene21870 | -0.82714 | 1.84E-54 | -1.69E-46 |
| MS.gene053420 | MS.gene21870 | 0.856162 | 3.88E-62 | -1.69E-46 |
| MS.gene053421 | MS.gene21870 | 0.809286 | 2.04E-50 | -1.69E-46 |
| MS.gene053488 | MS.gene21870 | 0.807619 | 4.63E-50 | -1.69E-46 |
| MS.gene053549 | MS.gene21870 | 0.811062 | 8.45E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene21870 | 0.821959 | 3.06E-53 | -1.69E-46 |
| MS.gene053826 | MS.gene21870 | 0.838418 | 2.91E-57 | -1.69E-46 |
| MS.gene053887 | MS.gene21870 | 0.806167 | 9.38E-50 | -1.69E-46 |
| MS.gene054056 | MS.gene21870 | 0.809018 | 2.33E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene21870 | -0.817194 | 3.74E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene21870 | 0.814058 | 1.87E-51 | -1.69E-46 |
| MS.gene054707 | MS.gene21870 | 0.821132 | 4.75E-53 | -1.69E-46 |
| MS.gene054708 | MS.gene21870 | 0.819439 | 1.16E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene21870 | -0.818787 | 1.63E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene21870 | -0.829391 | 5.28E-55 | -1.69E-46 |
| MS.gene055124 | MS.gene21870 | 0.850354 | 1.79E-60 | -1.69E-46 |
| MS.gene055139 | MS.gene21870 | 0.836769 | 7.71E-57 | -1.69E-46 |
| MS.gene055152 | MS.gene21870 | 0.800698 | 1.28E-48 | -1.69E-46 |
| MS.gene055154 | MS.gene21870 | 0.877188 | 7.68E-69 | -1.69E-46 |
| MS.gene055202 | MS.gene21870 | 0.825238 | 5.23E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene21870 | -0.836377 | 9.70E-57 | -1.69E-46 |
| MS.gene055502 | MS.gene21870 | -0.849641 | 2.84E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene21870 | -0.809631 | 1.72E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene21870 | -0.806515 | 7.93E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene21870 | -0.822733 | 2.02E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene21870 | -0.816773 | 4.65E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene21870 | -0.8315 | 1.61E-55 | -1.69E-46 |
| MS.gene055942 | MS.gene21870 | 0.82595 | 3.54E-54 | -1.69E-46 |
| MS.gene056224 | MS.gene21870 | 0.839529 | 1.50E-57 | -1.69E-46 |
| MS.gene056298 | MS.gene21870 | 0.818587 | 1.81E-52 | -1.69E-46 |
| MS.gene056310 | MS.gene21870 | 0.842413 | 2.63E-58 | -1.69E-46 |
| MS.gene056311 | MS.gene21870 | 0.88433 | 2.10E-71 | -1.69E-46 |
| MS.gene056313 | MS.gene21870 | 0.823008 | 1.74E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene21870 | -0.863581 | 2.25E-64 | -1.69E-46 |
| MS.gene056590 | MS.gene21870 | 0.808554 | 2.93E-50 | -1.69E-46 |
| MS.gene056591 | MS.gene21870 | 0.806934 | 6.46E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene21870 | -0.818364 | 2.04E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene21870 | -0.818308 | 2.10E-52 | -1.69E-46 |
| MS.gene056748 | MS.gene21870 | 0.805758 | 1.14E-49 | -1.69E-46 |
| MS.gene056856 | MS.gene21870 | 0.829841 | 4.11E-55 | -1.69E-46 |
| MS.gene057014 | MS.gene21870 | 0.831498 | 1.61E-55 | -1.69E-46 |
| MS.gene057499 | MS.gene21870 | 0.824494 | 7.83E-54 | -1.69E-46 |
| MS.gene057548 | MS.gene21870 | 0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene057549 | MS.gene21870 | 0.818432 | 1.97E-52 | -1.69E-46 |
| MS.gene057768 | MS.gene21870 | 0.851639 | 7.78E-61 | -1.69E-46 |
| MS.gene058068 | MS.gene21870 | 0.831581 | 1.54E-55 | -1.69E-46 |
| MS.gene058093 | MS.gene21870 | 0.819884 | 9.19E-53 | -1.69E-46 |
| MS.gene058099 | MS.gene21870 | 0.865281 | 6.62E-65 | -1.69E-46 |
| MS.gene058108 | MS.gene21870 | 0.867055 | 1.81E-65 | -1.69E-46 |
| MS.gene058109 | MS.gene21870 | 0.928082 | 4.77E-92 | -1.69E-46 |
| MS.gene058111 | MS.gene21870 | 0.987779 | 1.66E-171 | -1.69E-46 |
| MS.gene058117 | MS.gene21870 | 0.819892 | 9.15E-53 | -1.69E-46 |
| MS.gene058157 | MS.gene21870 | -0.808192 | 3.49E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene21870 | 0.894737 | 1.86E-75 | -1.69E-46 |
| MS.gene058173 | MS.gene21870 | 0.892756 | 1.18E-74 | -1.69E-46 |
| MS.gene058175 | MS.gene21870 | 0.898302 | 6.06E-77 | -1.69E-46 |
| MS.gene058268 | MS.gene21870 | 0.827091 | 1.89E-54 | -1.69E-46 |
| MS.gene058269 | MS.gene21870 | 0.811041 | 8.54E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene21870 | 0.816589 | 5.12E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene21870 | -0.819909 | 9.07E-53 | -1.69E-46 |
| MS.gene058382 | MS.gene21870 | 0.802224 | 6.21E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene21870 | -0.825905 | 3.63E-54 | -1.69E-46 |
| MS.gene058493 | MS.gene21870 | 0.852839 | 3.55E-61 | -1.69E-46 |
| MS.gene058494 | MS.gene21870 | 0.839047 | 2.00E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene21870 | -0.810515 | 1.11E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene21870 | 0.815736 | 7.94E-52 | -1.69E-46 |
| MS.gene058628 | MS.gene21870 | 0.814301 | 1.65E-51 | -1.69E-46 |
| MS.gene058629 | MS.gene21870 | 0.801549 | 8.54E-49 | -1.69E-46 |
| MS.gene058630 | MS.gene21870 | 0.80719 | 5.70E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene21870 | -0.8448 | 6.04E-59 | -1.69E-46 |
| MS.gene059037 | MS.gene21870 | 0.810825 | 9.51E-51 | -1.69E-46 |
| MS.gene059045 | MS.gene21870 | 0.848109 | 7.56E-60 | -1.69E-46 |
| MS.gene059223 | MS.gene21870 | 0.816186 | 6.30E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene21870 | -0.817801 | 2.73E-52 | -1.69E-46 |
| MS.gene059690 | MS.gene21870 | 0.803399 | 3.55E-49 | -1.69E-46 |
| MS.gene059694 | MS.gene21870 | 0.809751 | 1.62E-50 | -1.69E-46 |
| MS.gene059697 | MS.gene21870 | 0.810963 | 8.87E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene21870 | -0.853153 | 2.88E-61 | -1.69E-46 |
| MS.gene059953 | MS.gene21870 | 0.804745 | 1.86E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene21870 | 0.809531 | 1.81E-50 | -1.69E-46 |
| MS.gene060187 | MS.gene21870 | 0.815605 | 8.49E-52 | -1.69E-46 |
| MS.gene060593 | MS.gene21870 | 0.818146 | 2.28E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene21870 | 0.842373 | 2.69E-58 | -1.69E-46 |
| MS.gene060703 | MS.gene21870 | -0.803145 | 4.01E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene21870 | -0.817928 | 2.56E-52 | -1.69E-46 |
| MS.gene060778 | MS.gene21870 | -0.825788 | 3.87E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene21870 | -0.862012 | 6.85E-64 | -1.69E-46 |
| MS.gene060823 | MS.gene21870 | 0.837537 | 4.90E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene21870 | -0.83399 | 3.88E-56 | -1.69E-46 |
| MS.gene061044 | MS.gene21870 | 0.810219 | 1.28E-50 | -1.69E-46 |
| MS.gene061157 | MS.gene21870 | 0.800473 | 1.42E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21870.t1 | MTR_5g007730 | 98.715 | 389 | 5 | 0 | 1 | 389 | 1 | 389 | 0.0 | 801 |
| MS.gene21870.t1 | MTR_1g098140 | 97.429 | 389 | 10 | 0 | 1 | 389 | 1 | 389 | 0.0 | 790 |
| MS.gene21870.t1 | MTR_7g016820 | 97.429 | 389 | 10 | 0 | 1 | 389 | 1 | 389 | 0.0 | 789 |
| MS.gene21870.t1 | MTR_5g007760 | 96.658 | 389 | 13 | 0 | 1 | 389 | 1 | 389 | 0.0 | 789 |
| MS.gene21870.t1 | MTR_1g097935 | 97.172 | 389 | 11 | 0 | 1 | 389 | 1 | 389 | 0.0 | 787 |
| MS.gene21870.t1 | MTR_1g097910 | 96.915 | 389 | 12 | 0 | 1 | 389 | 1 | 389 | 0.0 | 787 |
| MS.gene21870.t1 | MTR_7g016800 | 96.915 | 389 | 12 | 0 | 1 | 389 | 1 | 389 | 0.0 | 786 |
| MS.gene21870.t1 | MTR_7g016720 | 97.172 | 389 | 11 | 0 | 1 | 389 | 1 | 389 | 0.0 | 786 |
| MS.gene21870.t1 | MTR_7g016700 | 96.658 | 389 | 13 | 0 | 1 | 389 | 1 | 389 | 0.0 | 785 |
| MS.gene21870.t1 | MTR_7g016780 | 96.401 | 389 | 14 | 0 | 1 | 389 | 1 | 389 | 0.0 | 782 |
| MS.gene21870.t1 | MTR_5g007717 | 95.630 | 389 | 17 | 0 | 1 | 389 | 1 | 389 | 0.0 | 779 |
| MS.gene21870.t1 | MTR_5g007713 | 95.630 | 389 | 17 | 0 | 1 | 389 | 1 | 389 | 0.0 | 778 |
| MS.gene21870.t1 | MTR_3g083920 | 90.464 | 388 | 37 | 0 | 1 | 388 | 1 | 388 | 0.0 | 747 |
| MS.gene21870.t1 | MTR_3g083910 | 89.691 | 388 | 40 | 0 | 1 | 388 | 1 | 388 | 0.0 | 744 |
| MS.gene21870.t1 | MTR_2g058470 | 86.889 | 389 | 51 | 0 | 1 | 389 | 1 | 389 | 0.0 | 715 |
| MS.gene21870.t1 | MTR_3g086260 | 81.443 | 388 | 72 | 0 | 1 | 388 | 1 | 388 | 0.0 | 676 |
| MS.gene21870.t1 | MTR_7g084300 | 79.949 | 389 | 78 | 0 | 1 | 389 | 1 | 389 | 0.0 | 671 |
| MS.gene21870.t1 | MTR_7g113405 | 96.370 | 303 | 11 | 0 | 87 | 389 | 1 | 303 | 0.0 | 601 |
| MS.gene21870.t1 | MTR_3g088675 | 65.810 | 389 | 133 | 0 | 1 | 389 | 1 | 389 | 0.0 | 574 |
| MS.gene21870.t1 | MTR_5g007740 | 80.982 | 326 | 62 | 0 | 64 | 389 | 1 | 326 | 0.0 | 555 |
| MS.gene21870.t1 | MTR_5g007723 | 68.434 | 396 | 78 | 5 | 12 | 389 | 32 | 398 | 0.0 | 530 |
| MS.gene21870.t1 | MTR_5g007770 | 77.333 | 300 | 35 | 2 | 70 | 369 | 1 | 267 | 2.09e-166 | 466 |
| MS.gene21870.t1 | MTR_3g088670 | 48.462 | 390 | 187 | 6 | 10 | 388 | 2 | 388 | 3.49e-129 | 377 |
| MS.gene21870.t1 | MTR_4g075560 | 42.368 | 380 | 212 | 4 | 11 | 387 | 13 | 388 | 3.66e-102 | 308 |
| MS.gene21870.t1 | MTR_4g078730 | 38.070 | 373 | 224 | 2 | 15 | 387 | 24 | 389 | 3.89e-94 | 287 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21870.t1 | AT5G13930 | 81.959 | 388 | 69 | 1 | 3 | 389 | 8 | 395 | 0.0 | 671 |
| MS.gene21870.t1 | AT4G34850 | 40.849 | 377 | 219 | 3 | 15 | 389 | 18 | 392 | 4.76e-98 | 297 |
| MS.gene21870.t1 | AT4G00040 | 40.153 | 391 | 223 | 6 | 1 | 387 | 2 | 385 | 3.46e-96 | 292 |
| MS.gene21870.t1 | AT1G02050 | 39.332 | 389 | 225 | 6 | 2 | 387 | 12 | 392 | 1.65e-88 | 273 |
| MS.gene21870.t1 | AT4G34850 | 40.312 | 320 | 188 | 2 | 72 | 389 | 1 | 319 | 1.63e-82 | 255 |
| MS.gene21870.t1 | AT3G52160 | 25.514 | 243 | 161 | 8 | 150 | 387 | 97 | 324 | 2.67e-11 | 64.7 |
Find 89 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCTATATTTGAGATGATT+TGG | 0.236890 | 5.1:+2058855 | MS.gene21870:CDS |
| AGAAGGCCCTGCAACCATTT+TGG | 0.256780 | 5.1:+2057772 | MS.gene21870:CDS |
| CTGATTACAACTCAATCTTT+TGG | 0.271084 | 5.1:+2059032 | MS.gene21870:CDS |
| CTTGTTGGACAAGCACTATT+TGG | 0.274988 | 5.1:+2058779 | MS.gene21870:CDS |
| TGGGGTGTGCTATTCGGTTT+TGG | 0.314746 | 5.1:+2059253 | MS.gene21870:CDS |
| TATCAACTCACTAAACTCTT+AGG | 0.335925 | 5.1:+2058578 | MS.gene21870:CDS |
| ACTTCGTTTGGCTAAAGATT+TGG | 0.342769 | 5.1:+2058664 | MS.gene21870:CDS |
| TGCTGTGCCAATAGCCAAAA+TGG | 0.346769 | 5.1:-2057786 | None:intergenic |
| TGAATACATGGCACCTTCAT+TGG | 0.347646 | 5.1:+2058406 | MS.gene21870:CDS |
| CCAATAGCCAAAATGGTTGC+AGG | 0.352617 | 5.1:-2057779 | None:intergenic |
| GCCATGTATTCACAAACATT+AGG | 0.353016 | 5.1:-2058395 | None:intergenic |
| AGGGAAGTGCTAAGTGAATA+TGG | 0.354750 | 5.1:+2059136 | MS.gene21870:CDS |
| TCTACTTGGTCTAGAATTGC+AGG | 0.363913 | 5.1:-2059073 | None:intergenic |
| TCAATGGCACCTTCACTATC+AGG | 0.366123 | 5.1:-2058896 | None:intergenic |
| CCATGTATTCACAAACATTA+GGG | 0.366545 | 5.1:-2058394 | None:intergenic |
| TGCATGTGTATTGTTTATCT+TGG | 0.369086 | 5.1:+2059171 | MS.gene21870:CDS |
| CATGAATGGGGTGTGCTATT+CGG | 0.371221 | 5.1:+2059247 | MS.gene21870:CDS |
| GGGGCAGCTGCACTTATTGT+TGG | 0.371699 | 5.1:+2058806 | MS.gene21870:CDS |
| AAGTGAGTAATCTTTGACTT+TGG | 0.381814 | 5.1:-2058512 | None:intergenic |
| CACCTTCTTAAAGATGTTCC+TGG | 0.385004 | 5.1:+2058950 | MS.gene21870:CDS |
| CCTTTGAGCCTGACGAATAT+CGG | 0.400897 | 5.1:-2057747 | None:intergenic |
| GGGCAGCTGCACTTATTGTT+GGG | 0.412905 | 5.1:+2058807 | MS.gene21870:CDS |
| ACTCACTTGGACAGTCTTGT+TGG | 0.427238 | 5.1:+2058764 | MS.gene21870:CDS |
| GGTTGAGGCTTTCCAACCAT+TGG | 0.429807 | 5.1:+2059003 | MS.gene21870:CDS |
| GTCCAAATCATCTCAAATAT+AGG | 0.429888 | 5.1:-2058857 | None:intergenic |
| AGTGAAAGCTATAAAAGAAT+GGG | 0.430526 | 5.1:+2058484 | MS.gene21870:CDS |
| AGGTGGCACGGTACTTCGTT+TGG | 0.437676 | 5.1:+2058652 | MS.gene21870:CDS |
| CAAGATGGTTTGAAGACAAC+AGG | 0.439919 | 5.1:+2059217 | MS.gene21870:CDS |
| AACAGGAGAAGGACATGAAT+GGG | 0.444037 | 5.1:+2059234 | MS.gene21870:CDS |
| CCCTAATGTTTGTGAATACA+TGG | 0.447676 | 5.1:+2058394 | MS.gene21870:CDS |
| GATTTGGCTGAGAACAATAA+AGG | 0.447965 | 5.1:+2058680 | MS.gene21870:CDS |
| CACCTGCAAAACAACCTTGT+TGG | 0.451176 | 5.1:-2058634 | None:intergenic |
| GTTGAGGCTTTCCAACCATT+GGG | 0.460019 | 5.1:+2059004 | MS.gene21870:CDS |
| CTTTGTTCAACACAATTGGC+TGG | 0.464913 | 5.1:-2057812 | None:intergenic |
| CCGATATTCGTCAGGCTCAA+AGG | 0.467342 | 5.1:+2057747 | MS.gene21870:CDS |
| CATGTATCTCCTCTTGATCA+TGG | 0.469562 | 5.1:-2058342 | None:intergenic |
| GATGGTCACCTTCGTGAAGC+TGG | 0.471329 | 5.1:+2058917 | MS.gene21870:CDS |
| CAGTGAAAGCTATAAAAGAA+TGG | 0.482912 | 5.1:+2058483 | MS.gene21870:CDS |
| TTCACGAAGGTGACCATCAA+TGG | 0.482923 | 5.1:-2058912 | None:intergenic |
| ACCTTCTTAAAGATGTTCCT+GGG | 0.484500 | 5.1:+2058951 | MS.gene21870:CDS |
| CGATATTCGTCAGGCTCAAA+GGG | 0.485417 | 5.1:+2057748 | MS.gene21870:CDS |
| GACAAGCACTATTTGGAGAT+GGG | 0.493473 | 5.1:+2058786 | MS.gene21870:CDS |
| TCTAGAATTGCAGGACCACC+AGG | 0.493617 | 5.1:-2059064 | None:intergenic |
| TGTGCTTTGTTCAACACAAT+TGG | 0.494990 | 5.1:-2057816 | None:intergenic |
| GATAGTGAAGGTGCCATTGA+TGG | 0.501118 | 5.1:+2058899 | MS.gene21870:CDS |
| GTCACTGCAGTCACATTTCG+TGG | 0.502542 | 5.1:+2058731 | MS.gene21870:CDS |
| GAGTGTGTCCGATATTCGTC+AGG | 0.510599 | 5.1:+2057739 | MS.gene21870:CDS |
| GGACAAGCACTATTTGGAGA+TGG | 0.510737 | 5.1:+2058785 | MS.gene21870:CDS |
| CAACAGGAGAAGGACATGAA+TGG | 0.511592 | 5.1:+2059233 | MS.gene21870:CDS |
| CAAGCGGTGTAGATATGCCT+GGG | 0.512423 | 5.1:+2058549 | MS.gene21870:CDS |
| TATAAATAAAGCATTGGTTG+AGG | 0.518859 | 5.1:+2058988 | MS.gene21870:CDS |
| AATCAGATATTCCCAATGGT+TGG | 0.520494 | 5.1:-2059015 | None:intergenic |
| ACAAGCGGTGTAGATATGCC+TGG | 0.526709 | 5.1:+2058548 | MS.gene21870:CDS |
| GCGCAAGACAACAGTCTCAA+TGG | 0.533391 | 5.1:-2059287 | None:intergenic |
| AGAAAGAAATCAACTCAAGA+TGG | 0.548960 | 5.1:+2059202 | MS.gene21870:CDS |
| TCCCAGGAACATCTTTAAGA+AGG | 0.550142 | 5.1:-2058952 | None:intergenic |
| GTGAGTTGATAATCAGCCCC+AGG | 0.553624 | 5.1:-2058566 | None:intergenic |
| ACAGTCTCAATGGTAAGTCC+TGG | 0.565547 | 5.1:-2059277 | None:intergenic |
| AGGCATATCTACACCGCTTG+TGG | 0.567210 | 5.1:-2058546 | None:intergenic |
| CTGTCCAAGTGAGTATCACT+AGG | 0.567310 | 5.1:-2058755 | None:intergenic |
| GCAGCCTCCTTCCCTAGTCT+AGG | 0.573798 | 5.1:-2058461 | None:intergenic |
| TGGTAGAAGTACCTAGACTA+GGG | 0.575927 | 5.1:+2058450 | MS.gene21870:CDS |
| TCTTGTCTAGCATCCAATGA+AGG | 0.577000 | 5.1:-2058419 | None:intergenic |
| CGAAAAGATGAGAGCCACGA+GGG | 0.578056 | 5.1:+2059117 | MS.gene21870:CDS |
| GTGGTAGAAGTACCTAGACT+AGG | 0.578892 | 5.1:+2058449 | MS.gene21870:CDS |
| GGTTTGAAGACAACAGGAGA+AGG | 0.581105 | 5.1:+2059223 | MS.gene21870:CDS |
| AGAAGTACCTAGACTAGGGA+AGG | 0.582711 | 5.1:+2058454 | MS.gene21870:CDS |
| CGTCAGGCTCAAAGGGCAGA+AGG | 0.599084 | 5.1:+2057755 | MS.gene21870:CDS |
| TTCACTTAGCACTTCCCTCG+TGG | 0.607811 | 5.1:-2059131 | None:intergenic |
| CAATAGCCAAAATGGTTGCA+GGG | 0.607881 | 5.1:-2057778 | None:intergenic |
| GTGACAAATCCATGATCAAG+AGG | 0.613469 | 5.1:+2058333 | MS.gene21870:CDS |
| TTAATCGTTTGCACCACAAG+CGG | 0.613703 | 5.1:+2058533 | MS.gene21870:CDS |
| TTGTAATCAGATATTCCCAA+TGG | 0.614179 | 5.1:-2059019 | None:intergenic |
| ACAAGCACTATTTGGAGATG+GGG | 0.614657 | 5.1:+2058787 | MS.gene21870:CDS |
| AGTACCTAGACTAGGGAAGG+AGG | 0.631813 | 5.1:+2058457 | MS.gene21870:CDS |
| GACTGTTGTCTTGCGCAGTG+TGG | 0.633699 | 5.1:+2059294 | MS.gene21870:CDS |
| GAGATACATGTATCTAACAG+AGG | 0.641094 | 5.1:+2058355 | MS.gene21870:CDS |
| TGGTCCTAGTGATACTCACT+TGG | 0.641437 | 5.1:+2058751 | MS.gene21870:CDS |
| ACAATTGCTCCTGATAGTGA+AGG | 0.650851 | 5.1:+2058887 | MS.gene21870:CDS |
| CCGAAAAGATGAGAGCCACG+AGG | 0.666354 | 5.1:+2059116 | MS.gene21870:CDS |
| GTGAAAGCTATAAAAGAATG+GGG | 0.667253 | 5.1:+2058485 | MS.gene21870:CDS |
| ATTGGATGCTAGACAAGACA+TGG | 0.674061 | 5.1:+2058424 | MS.gene21870:CDS |
| ATGTTAATCCAGCTTCACGA+AGG | 0.677588 | 5.1:-2058925 | None:intergenic |
| TGCTAGACAAGACATGGTGG+TGG | 0.691857 | 5.1:+2058430 | MS.gene21870:CDS |
| AAGCGGTGTAGATATGCCTG+GGG | 0.707764 | 5.1:+2058550 | MS.gene21870:CDS |
| ACAGGAGAAGGACATGAATG+GGG | 0.714424 | 5.1:+2059235 | MS.gene21870:CDS |
| CTAGAATTGCAGGACCACCA+GGG | 0.728884 | 5.1:-2059063 | None:intergenic |
| AGATACATGATGTACCAACA+AGG | 0.731164 | 5.1:+2058620 | MS.gene21870:CDS |
| GGATGCTAGACAAGACATGG+TGG | 0.797709 | 5.1:+2058427 | MS.gene21870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATATAAATAAAGCAT+TGG | + | chr5.1:2058982-2059001 | MS.gene21870:CDS | 10.0% |
| !! | ATGTTAAAAAAAAAAATGAT+CGG | + | chr5.1:2058096-2058115 | MS.gene21870:intron | 10.0% |
| !! | AGTATGTAAAAATTAAATAG+TGG | - | chr5.1:2057929-2057948 | None:intergenic | 15.0% |
| !! | CTAATTAATGACATAATAAT+AGG | - | chr5.1:2058249-2058268 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAATGATCGGAA+GGG | + | chr5.1:2058101-2058120 | MS.gene21870:intron | 20.0% |
| !! | ATTATGTCATTAATTAGTGT+TGG | + | chr5.1:2058252-2058271 | MS.gene21870:intron | 20.0% |
| !! | TAAAAAAAAAAATGATCGGA+AGG | + | chr5.1:2058100-2058119 | MS.gene21870:intron | 20.0% |
| !!! | AGCAATTTTTTTCAACAAAT+AGG | + | chr5.1:2058145-2058164 | MS.gene21870:intron | 20.0% |
| !!! | ATCATGTATCTTTTTACATA+TGG | - | chr5.1:2058611-2058630 | None:intergenic | 20.0% |
| !!! | TATTTGTTGAAAAAAATTGC+TGG | - | chr5.1:2058146-2058165 | None:intergenic | 20.0% |
| ! | AGTGAAAGCTATAAAAGAAT+GGG | + | chr5.1:2058484-2058503 | MS.gene21870:CDS | 25.0% |
| ! | CATTTCTTTATAACTACTTC+AGG | + | chr5.1:2058311-2058330 | MS.gene21870:intron | 25.0% |
| ! | CTGAAGTAGTTATAAAGAAA+TGG | - | chr5.1:2058313-2058332 | None:intergenic | 25.0% |
| ! | TTAACATACTCAAAAGTCAA+AGG | - | chr5.1:2058083-2058102 | None:intergenic | 25.0% |
| !! | AATATAGGCTTTTCAATTTC+TGG | - | chr5.1:2058845-2058864 | None:intergenic | 25.0% |
| !! | TTCGTTTACATTTATTTCTC+TGG | + | chr5.1:2057950-2057969 | MS.gene21870:intron | 25.0% |
| !!! | AAGAAATGGCATTAATTTGT+TGG | - | chr5.1:2058299-2058318 | None:intergenic | 25.0% |
| !!! | TATAAATAAAGCATTGGTTG+AGG | + | chr5.1:2058988-2059007 | MS.gene21870:CDS | 25.0% |
| AGAAAGAAATCAACTCAAGA+TGG | + | chr5.1:2059202-2059221 | MS.gene21870:CDS | 30.0% | |
| CAGTGAAAGCTATAAAAGAA+TGG | + | chr5.1:2058483-2058502 | MS.gene21870:CDS | 30.0% | |
| CCATGTATTCACAAACATTA+GGG | - | chr5.1:2058397-2058416 | None:intergenic | 30.0% | |
| GTCCAAATCATCTCAAATAT+AGG | - | chr5.1:2058860-2058879 | None:intergenic | 30.0% | |
| GTGAAAGCTATAAAAGAATG+GGG | + | chr5.1:2058485-2058504 | MS.gene21870:CDS | 30.0% | |
| TATCAACTCACTAAACTCTT+AGG | + | chr5.1:2058578-2058597 | MS.gene21870:CDS | 30.0% | |
| TGCATGTGTATTGTTTATCT+TGG | + | chr5.1:2059171-2059190 | MS.gene21870:CDS | 30.0% | |
| TTGTAATCAGATATTCCCAA+TGG | - | chr5.1:2059022-2059041 | None:intergenic | 30.0% | |
| ! | AAGTGAGTAATCTTTGACTT+TGG | - | chr5.1:2058515-2058534 | None:intergenic | 30.0% |
| ! | AGCCTATATTTGAGATGATT+TGG | + | chr5.1:2058855-2058874 | MS.gene21870:CDS | 30.0% |
| ! | CTGATTACAACTCAATCTTT+TGG | + | chr5.1:2059032-2059051 | MS.gene21870:CDS | 30.0% |
| !!! | ATATTTTTTGACACAATCCC+AGG | - | chr5.1:2058971-2058990 | None:intergenic | 30.0% |
| !!! | GTGATTTTGAAGTAGAAATC+AGG | - | chr5.1:2057845-2057864 | None:intergenic | 30.0% |
| AATCAGATATTCCCAATGGT+TGG | - | chr5.1:2059018-2059037 | None:intergenic | 35.0% | |
| ACCTTCTTAAAGATGTTCCT+GGG | + | chr5.1:2058951-2058970 | MS.gene21870:CDS | 35.0% | |
| ACTTCGTTTGGCTAAAGATT+TGG | + | chr5.1:2058664-2058683 | MS.gene21870:CDS | 35.0% | |
| AGATACATGATGTACCAACA+AGG | + | chr5.1:2058620-2058639 | MS.gene21870:CDS | 35.0% | |
| CCCTAATGTTTGTGAATACA+TGG | + | chr5.1:2058394-2058413 | MS.gene21870:CDS | 35.0% | |
| GAGATACATGTATCTAACAG+AGG | + | chr5.1:2058355-2058374 | MS.gene21870:CDS | 35.0% | |
| GATTTGGCTGAGAACAATAA+AGG | + | chr5.1:2058680-2058699 | MS.gene21870:CDS | 35.0% | |
| GCCATGTATTCACAAACATT+AGG | - | chr5.1:2058398-2058417 | None:intergenic | 35.0% | |
| ! | ATGTATGCACTGCTATTTAG+TGG | - | chr5.1:2058182-2058201 | None:intergenic | 35.0% |
| ! | TGTGCTTTGTTCAACACAAT+TGG | - | chr5.1:2057819-2057838 | None:intergenic | 35.0% |
| AACAGGAGAAGGACATGAAT+GGG | + | chr5.1:2059234-2059253 | MS.gene21870:CDS | 40.0% | |
| ACAAGCACTATTTGGAGATG+GGG | + | chr5.1:2058787-2058806 | MS.gene21870:CDS | 40.0% | |
| ATGTTAATCCAGCTTCACGA+AGG | - | chr5.1:2058928-2058947 | None:intergenic | 40.0% | |
| ATTGGATGCTAGACAAGACA+TGG | + | chr5.1:2058424-2058443 | MS.gene21870:CDS | 40.0% | |
| CAAGATGGTTTGAAGACAAC+AGG | + | chr5.1:2059217-2059236 | MS.gene21870:CDS | 40.0% | |
| CAATAGCCAAAATGGTTGCA+GGG | - | chr5.1:2057781-2057800 | None:intergenic | 40.0% | |
| CACCTTCTTAAAGATGTTCC+TGG | + | chr5.1:2058950-2058969 | MS.gene21870:CDS | 40.0% | |
| CATGTATCTCCTCTTGATCA+TGG | - | chr5.1:2058345-2058364 | None:intergenic | 40.0% | |
| CTTGTTGGACAAGCACTATT+TGG | + | chr5.1:2058779-2058798 | MS.gene21870:CDS | 40.0% | |
| CTTTGTTCAACACAATTGGC+TGG | - | chr5.1:2057815-2057834 | None:intergenic | 40.0% | |
| GACAAGCACTATTTGGAGAT+GGG | + | chr5.1:2058786-2058805 | MS.gene21870:CDS | 40.0% | |
| GTGACAAATCCATGATCAAG+AGG | + | chr5.1:2058333-2058352 | MS.gene21870:CDS | 40.0% | |
| TCTTGTCTAGCATCCAATGA+AGG | - | chr5.1:2058422-2058441 | None:intergenic | 40.0% | |
| TGAATACATGGCACCTTCAT+TGG | + | chr5.1:2058406-2058425 | MS.gene21870:CDS | 40.0% | |
| TTAATCGTTTGCACCACAAG+CGG | + | chr5.1:2058533-2058552 | MS.gene21870:CDS | 40.0% | |
| ! | ACAATTGCTCCTGATAGTGA+AGG | + | chr5.1:2058887-2058906 | MS.gene21870:CDS | 40.0% |
| ! | AGGCTAACTTTTGCTCTACT+TGG | - | chr5.1:2059090-2059109 | None:intergenic | 40.0% |
| ! | TCCCAGGAACATCTTTAAGA+AGG | - | chr5.1:2058955-2058974 | None:intergenic | 40.0% |
| ! | TCTACTTGGTCTAGAATTGC+AGG | - | chr5.1:2059076-2059095 | None:intergenic | 40.0% |
| !! | AGGGAAGTGCTAAGTGAATA+TGG | + | chr5.1:2059136-2059155 | MS.gene21870:CDS | 40.0% |
| !! | TACCAACAAGGTTGTTTTGC+AGG | + | chr5.1:2058632-2058651 | MS.gene21870:CDS | 40.0% |
| !! | TGGTAGAAGTACCTAGACTA+GGG | + | chr5.1:2058450-2058469 | MS.gene21870:CDS | 40.0% |
| !!! | GGCTTTTCAATTTCTGGTAG+CGG | - | chr5.1:2058839-2058858 | None:intergenic | 40.0% |
| ACAGGAGAAGGACATGAATG+GGG | + | chr5.1:2059235-2059254 | MS.gene21870:CDS | 45.0% | |
| ACAGTCTCAATGGTAAGTCC+TGG | - | chr5.1:2059280-2059299 | None:intergenic | 45.0% | |
| CAACAGGAGAAGGACATGAA+TGG | + | chr5.1:2059233-2059252 | MS.gene21870:CDS | 45.0% | |
| CACCTGCAAAACAACCTTGT+TGG | - | chr5.1:2058637-2058656 | None:intergenic | 45.0% | |
| CCAATAGCCAAAATGGTTGC+AGG | - | chr5.1:2057782-2057801 | None:intergenic | 45.0% | |
| CCTTTGAGCCTGACGAATAT+CGG | - | chr5.1:2057750-2057769 | None:intergenic | 45.0% | |
| CGATATTCGTCAGGCTCAAA+GGG | + | chr5.1:2057748-2057767 | MS.gene21870:CDS | 45.0% | |
| CTGTCCAAGTGAGTATCACT+AGG | - | chr5.1:2058758-2058777 | None:intergenic | 45.0% | |
| GGACAAGCACTATTTGGAGA+TGG | + | chr5.1:2058785-2058804 | MS.gene21870:CDS | 45.0% | |
| GGTTTGAAGACAACAGGAGA+AGG | + | chr5.1:2059223-2059242 | MS.gene21870:CDS | 45.0% | |
| GTTGAGGCTTTCCAACCATT+GGG | + | chr5.1:2059004-2059023 | MS.gene21870:CDS | 45.0% | |
| TCAATGGCACCTTCACTATC+AGG | - | chr5.1:2058899-2058918 | None:intergenic | 45.0% | |
| TGCTGTGCCAATAGCCAAAA+TGG | - | chr5.1:2057789-2057808 | None:intergenic | 45.0% | |
| TGGTCCTAGTGATACTCACT+TGG | + | chr5.1:2058751-2058770 | MS.gene21870:CDS | 45.0% | |
| TTCACGAAGGTGACCATCAA+TGG | - | chr5.1:2058915-2058934 | None:intergenic | 45.0% | |
| ! | ACTCACTTGGACAGTCTTGT+TGG | + | chr5.1:2058764-2058783 | MS.gene21870:CDS | 45.0% |
| ! | ATCTTTTGGATTGCACACCC+TGG | + | chr5.1:2059046-2059065 | MS.gene21870:CDS | 45.0% |
| ! | CATGAATGGGGTGTGCTATT+CGG | + | chr5.1:2059247-2059266 | MS.gene21870:CDS | 45.0% |
| !! | AGAAGTACCTAGACTAGGGA+AGG | + | chr5.1:2058454-2058473 | MS.gene21870:CDS | 45.0% |
| !! | CAACAAGGTTGTTTTGCAGG+TGG | + | chr5.1:2058635-2058654 | MS.gene21870:CDS | 45.0% |
| !! | GATAGTGAAGGTGCCATTGA+TGG | + | chr5.1:2058899-2058918 | MS.gene21870:CDS | 45.0% |
| !! | GTGGTAGAAGTACCTAGACT+AGG | + | chr5.1:2058449-2058468 | MS.gene21870:CDS | 45.0% |
| !! | TCTCATCTTTTCGGGCTTCA+AGG | - | chr5.1:2059110-2059129 | None:intergenic | 45.0% |
| !!! | CCTGCAACCATTTTGGCTAT+TGG | + | chr5.1:2057779-2057798 | MS.gene21870:CDS | 45.0% |
| AAGCGGTGTAGATATGCCTG+GGG | + | chr5.1:2058550-2058569 | MS.gene21870:CDS | 50.0% | |
| ACAAGCGGTGTAGATATGCC+TGG | + | chr5.1:2058548-2058567 | MS.gene21870:CDS | 50.0% | |
| AGGCATATCTACACCGCTTG+TGG | - | chr5.1:2058549-2058568 | None:intergenic | 50.0% | |
| AGTACCTAGACTAGGGAAGG+AGG | + | chr5.1:2058457-2058476 | MS.gene21870:CDS | 50.0% | |
| CAAGCGGTGTAGATATGCCT+GGG | + | chr5.1:2058549-2058568 | MS.gene21870:CDS | 50.0% | |
| CCGATATTCGTCAGGCTCAA+AGG | + | chr5.1:2057747-2057766 | MS.gene21870:CDS | 50.0% | |
| CGAAAAGATGAGAGCCACGA+GGG | + | chr5.1:2059117-2059136 | MS.gene21870:CDS | 50.0% | |
| CTAGAATTGCAGGACCACCA+GGG | - | chr5.1:2059066-2059085 | None:intergenic | 50.0% | |
| GAGTGTGTCCGATATTCGTC+AGG | + | chr5.1:2057739-2057758 | MS.gene21870:CDS | 50.0% | |
| GCGCAAGACAACAGTCTCAA+TGG | - | chr5.1:2059290-2059309 | None:intergenic | 50.0% | |
| GGATGCTAGACAAGACATGG+TGG | + | chr5.1:2058427-2058446 | MS.gene21870:CDS | 50.0% | |
| GGGCAGCTGCACTTATTGTT+GGG | + | chr5.1:2058807-2058826 | MS.gene21870:CDS | 50.0% | |
| GGTTGAGGCTTTCCAACCAT+TGG | + | chr5.1:2059003-2059022 | MS.gene21870:CDS | 50.0% | |
| GTCACTGCAGTCACATTTCG+TGG | + | chr5.1:2058731-2058750 | MS.gene21870:CDS | 50.0% | |
| TGCTAGACAAGACATGGTGG+TGG | + | chr5.1:2058430-2058449 | MS.gene21870:CDS | 50.0% | |
| TTCACTTAGCACTTCCCTCG+TGG | - | chr5.1:2059134-2059153 | None:intergenic | 50.0% | |
| ! | AGAAGGCCCTGCAACCATTT+TGG | + | chr5.1:2057772-2057791 | MS.gene21870:CDS | 50.0% |
| ! | CCTCGTGGCTCTCATCTTTT+CGG | - | chr5.1:2059119-2059138 | None:intergenic | 50.0% |
| ! | CTCGTGGCTCTCATCTTTTC+GGG | - | chr5.1:2059118-2059137 | None:intergenic | 50.0% |
| ! | TCTAGAATTGCAGGACCACC+AGG | - | chr5.1:2059067-2059086 | None:intergenic | 50.0% |
| ! | TTTTGGATTGCACACCCTGG+TGG | + | chr5.1:2059049-2059068 | MS.gene21870:CDS | 50.0% |
| !! | AGGTTGTTTTGCAGGTGGCA+CGG | + | chr5.1:2058640-2058659 | MS.gene21870:CDS | 50.0% |
| !! | GTGAGTTGATAATCAGCCCC+AGG | - | chr5.1:2058569-2058588 | None:intergenic | 50.0% |
| !! | TGGGGTGTGCTATTCGGTTT+TGG | + | chr5.1:2059253-2059272 | MS.gene21870:CDS | 50.0% |
| !!! | GTGCTATTCGGTTTTGGACC+AGG | + | chr5.1:2059259-2059278 | MS.gene21870:CDS | 50.0% |
| AGGTGGCACGGTACTTCGTT+TGG | + | chr5.1:2058652-2058671 | MS.gene21870:CDS | 55.0% | |
| CCGAAAAGATGAGAGCCACG+AGG | + | chr5.1:2059116-2059135 | MS.gene21870:CDS | 55.0% | |
| GACTGTTGTCTTGCGCAGTG+TGG | + | chr5.1:2059294-2059313 | MS.gene21870:CDS | 55.0% | |
| GATGGTCACCTTCGTGAAGC+TGG | + | chr5.1:2058917-2058936 | MS.gene21870:CDS | 55.0% | |
| GGGGCAGCTGCACTTATTGT+TGG | + | chr5.1:2058806-2058825 | MS.gene21870:CDS | 55.0% | |
| CGTCAGGCTCAAAGGGCAGA+AGG | + | chr5.1:2057755-2057774 | MS.gene21870:CDS | 60.0% | |
| GCAGCCTCCTTCCCTAGTCT+AGG | - | chr5.1:2058464-2058483 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 2057734 | 2059324 | 2057734 | ID=MS.gene21870 |
| chr5.1 | mRNA | 2057734 | 2059324 | 2057734 | ID=MS.gene21870.t1;Parent=MS.gene21870 |
| chr5.1 | exon | 2057734 | 2057911 | 2057734 | ID=MS.gene21870.t1.exon1;Parent=MS.gene21870.t1 |
| chr5.1 | CDS | 2057734 | 2057911 | 2057734 | ID=cds.MS.gene21870.t1;Parent=MS.gene21870.t1 |
| chr5.1 | exon | 2058333 | 2059324 | 2058333 | ID=MS.gene21870.t1.exon2;Parent=MS.gene21870.t1 |
| chr5.1 | CDS | 2058333 | 2059324 | 2058333 | ID=cds.MS.gene21870.t1;Parent=MS.gene21870.t1 |
| Gene Sequence |
| Protein sequence |
