Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38097.t1 | CAA57783.1 | 99 | 312 | 3 | 0 | 1 | 312 | 1 | 312 | 3.70E-175 | 624 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38097.t1 | P26690 | 84.2 | 310 | 49 | 0 | 3 | 312 | 4 | 313 | 9.0e-154 | 544.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38097.t1 | Q43555 | 99.0 | 312 | 3 | 0 | 1 | 312 | 1 | 312 | 2.7e-175 | 624.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene38097 | -0.807891 | 4.05E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene38097 | -0.833355 | 5.59E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene38097 | -0.830483 | 2.86E-55 | -1.69E-46 |
| MS.gene049232 | MS.gene38097 | -0.852361 | 4.85E-61 | -1.69E-46 |
| MS.gene049259 | MS.gene38097 | 0.820661 | 6.10E-53 | -1.69E-46 |
| MS.gene049281 | MS.gene38097 | 0.807644 | 4.57E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene38097 | -0.820569 | 6.40E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene38097 | -0.845328 | 4.35E-59 | -1.69E-46 |
| MS.gene049483 | MS.gene38097 | 0.847489 | 1.12E-59 | -1.69E-46 |
| MS.gene049611 | MS.gene38097 | 0.846885 | 1.64E-59 | -1.69E-46 |
| MS.gene049627 | MS.gene38097 | -0.808221 | 3.44E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene38097 | 0.844725 | 6.33E-59 | -1.69E-46 |
| MS.gene050095 | MS.gene38097 | 0.821815 | 3.30E-53 | -1.69E-46 |
| MS.gene05010 | MS.gene38097 | -0.831748 | 1.40E-55 | -1.69E-46 |
| MS.gene050129 | MS.gene38097 | 0.818648 | 1.76E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene38097 | -0.823496 | 1.34E-53 | -1.69E-46 |
| MS.gene050165 | MS.gene38097 | -0.815418 | 9.34E-52 | -1.69E-46 |
| MS.gene050216 | MS.gene38097 | -0.852487 | 4.47E-61 | -1.69E-46 |
| MS.gene050323 | MS.gene38097 | -0.810792 | 9.66E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene38097 | -0.811634 | 6.35E-51 | -1.69E-46 |
| MS.gene050354 | MS.gene38097 | 0.807691 | 4.47E-50 | -1.69E-46 |
| MS.gene050363 | MS.gene38097 | 0.839184 | 1.84E-57 | -1.69E-46 |
| MS.gene050380 | MS.gene38097 | 0.861483 | 9.94E-64 | -1.69E-46 |
| MS.gene050381 | MS.gene38097 | 0.928156 | 4.30E-92 | -1.69E-46 |
| MS.gene050496 | MS.gene38097 | -0.81805 | 2.40E-52 | -1.69E-46 |
| MS.gene050502 | MS.gene38097 | -0.809106 | 2.23E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene38097 | -0.866434 | 2.86E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene38097 | -0.82256 | 2.22E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene38097 | -0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene38097 | -0.854841 | 9.41E-62 | -1.69E-46 |
| MS.gene050647 | MS.gene38097 | 0.808541 | 2.94E-50 | -1.69E-46 |
| MS.gene050662 | MS.gene38097 | -0.806345 | 8.61E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene38097 | -0.839571 | 1.46E-57 | -1.69E-46 |
| MS.gene050699 | MS.gene38097 | -0.809386 | 1.94E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene38097 | -0.801341 | 9.43E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene38097 | -0.806543 | 7.82E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene38097 | -0.804104 | 2.54E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene38097 | -0.854918 | 8.94E-62 | -1.69E-46 |
| MS.gene050871 | MS.gene38097 | -0.858994 | 5.62E-63 | -1.69E-46 |
| MS.gene050883 | MS.gene38097 | 0.905562 | 3.77E-80 | -1.69E-46 |
| MS.gene050986 | MS.gene38097 | -0.844802 | 6.03E-59 | -1.69E-46 |
| MS.gene051044 | MS.gene38097 | 0.825813 | 3.82E-54 | -1.69E-46 |
| MS.gene05104 | MS.gene38097 | 0.845098 | 5.02E-59 | -1.69E-46 |
| MS.gene051127 | MS.gene38097 | 0.896063 | 5.28E-76 | -1.69E-46 |
| MS.gene051138 | MS.gene38097 | 0.830382 | 3.03E-55 | -1.69E-46 |
| MS.gene051268 | MS.gene38097 | -0.818738 | 1.68E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene38097 | 0.817651 | 2.95E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene38097 | 0.801545 | 8.56E-49 | -1.69E-46 |
| MS.gene051412 | MS.gene38097 | 0.814187 | 1.75E-51 | -1.69E-46 |
| MS.gene05141 | MS.gene38097 | 0.852718 | 3.84E-61 | -1.69E-46 |
| MS.gene051509 | MS.gene38097 | -0.846743 | 1.79E-59 | -1.69E-46 |
| MS.gene051551 | MS.gene38097 | -0.820235 | 7.64E-53 | -1.69E-46 |
| MS.gene051564 | MS.gene38097 | -0.819905 | 9.08E-53 | -1.69E-46 |
| MS.gene051566 | MS.gene38097 | -0.803143 | 4.01E-49 | -1.69E-46 |
| MS.gene051632 | MS.gene38097 | 0.817719 | 2.85E-52 | -1.69E-46 |
| MS.gene051694 | MS.gene38097 | -0.818178 | 2.24E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene38097 | -0.808364 | 3.21E-50 | -1.69E-46 |
| MS.gene051863 | MS.gene38097 | 0.80062 | 1.32E-48 | -1.69E-46 |
| MS.gene051946 | MS.gene38097 | 0.863405 | 2.55E-64 | -1.69E-46 |
| MS.gene052164 | MS.gene38097 | -0.851835 | 6.85E-61 | -1.69E-46 |
| MS.gene052482 | MS.gene38097 | -0.829078 | 6.30E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene38097 | -0.835255 | 1.87E-56 | -1.69E-46 |
| MS.gene052802 | MS.gene38097 | 0.813758 | 2.18E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene38097 | -0.800207 | 1.61E-48 | -1.69E-46 |
| MS.gene052966 | MS.gene38097 | -0.832022 | 1.20E-55 | -1.69E-46 |
| MS.gene053018 | MS.gene38097 | -0.822301 | 2.55E-53 | -1.69E-46 |
| MS.gene053031 | MS.gene38097 | 0.808312 | 3.29E-50 | -1.69E-46 |
| MS.gene053069 | MS.gene38097 | 0.831034 | 2.10E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene38097 | -0.846238 | 2.46E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene38097 | -0.821127 | 4.76E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene38097 | -0.818756 | 1.66E-52 | -1.69E-46 |
| MS.gene053406 | MS.gene38097 | 0.803072 | 4.15E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene38097 | 0.889586 | 2.12E-73 | -1.69E-46 |
| MS.gene053436 | MS.gene38097 | -0.832481 | 9.22E-56 | -1.69E-46 |
| MS.gene053488 | MS.gene38097 | 0.834773 | 2.47E-56 | -1.69E-46 |
| MS.gene053549 | MS.gene38097 | 0.824022 | 1.01E-53 | -1.69E-46 |
| MS.gene053561 | MS.gene38097 | 0.861416 | 1.04E-63 | -1.69E-46 |
| MS.gene053574 | MS.gene38097 | -0.833813 | 4.30E-56 | -1.69E-46 |
| MS.gene053626 | MS.gene38097 | -0.81238 | 4.37E-51 | -1.69E-46 |
| MS.gene053826 | MS.gene38097 | 0.834925 | 2.26E-56 | -1.69E-46 |
| MS.gene054003 | MS.gene38097 | -0.810728 | 9.98E-51 | -1.69E-46 |
| MS.gene054054 | MS.gene38097 | 0.823015 | 1.74E-53 | -1.69E-46 |
| MS.gene054056 | MS.gene38097 | 0.818584 | 1.82E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene38097 | -0.860736 | 1.68E-63 | -1.69E-46 |
| MS.gene054616 | MS.gene38097 | 0.851513 | 8.45E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene38097 | -0.818316 | 2.09E-52 | -1.69E-46 |
| MS.gene054706 | MS.gene38097 | 0.830985 | 2.16E-55 | -1.69E-46 |
| MS.gene054707 | MS.gene38097 | 0.816135 | 6.46E-52 | -1.69E-46 |
| MS.gene054708 | MS.gene38097 | 0.870332 | 1.58E-66 | -1.69E-46 |
| MS.gene05470 | MS.gene38097 | -0.804876 | 1.75E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene38097 | -0.831088 | 2.03E-55 | -1.69E-46 |
| MS.gene055124 | MS.gene38097 | 0.889033 | 3.48E-73 | -1.69E-46 |
| MS.gene055139 | MS.gene38097 | 0.83739 | 5.35E-57 | -1.69E-46 |
| MS.gene055154 | MS.gene38097 | 0.891792 | 2.87E-74 | -1.69E-46 |
| MS.gene055202 | MS.gene38097 | 0.85308 | 3.03E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene38097 | -0.84002 | 1.12E-57 | -1.69E-46 |
| MS.gene055401 | MS.gene38097 | 0.809938 | 1.48E-50 | -1.69E-46 |
| MS.gene055502 | MS.gene38097 | -0.841328 | 5.08E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene38097 | -0.833843 | 4.23E-56 | -1.69E-46 |
| MS.gene055629 | MS.gene38097 | -0.800668 | 1.29E-48 | -1.69E-46 |
| MS.gene055722 | MS.gene38097 | -0.802566 | 5.28E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene38097 | -0.822541 | 2.24E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene38097 | -0.801387 | 9.22E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene38097 | -0.826781 | 2.25E-54 | -1.69E-46 |
| MS.gene055959 | MS.gene38097 | 0.818793 | 1.63E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene38097 | -0.802549 | 5.32E-49 | -1.69E-46 |
| MS.gene056218 | MS.gene38097 | 0.800094 | 1.69E-48 | -1.69E-46 |
| MS.gene056224 | MS.gene38097 | 0.832261 | 1.05E-55 | -1.69E-46 |
| MS.gene056298 | MS.gene38097 | 0.81344 | 2.56E-51 | -1.69E-46 |
| MS.gene056310 | MS.gene38097 | 0.890782 | 7.21E-74 | -1.69E-46 |
| MS.gene056311 | MS.gene38097 | 0.891525 | 3.67E-74 | -1.69E-46 |
| MS.gene056313 | MS.gene38097 | 0.899133 | 2.68E-77 | -1.69E-46 |
| MS.gene056374 | MS.gene38097 | -0.80655 | 7.79E-50 | -1.69E-46 |
| MS.gene056408 | MS.gene38097 | 0.834123 | 3.60E-56 | -1.69E-46 |
| MS.gene056504 | MS.gene38097 | -0.855975 | 4.40E-62 | -1.69E-46 |
| MS.gene056510 | MS.gene38097 | -0.821937 | 3.10E-53 | -1.69E-46 |
| MS.gene056549 | MS.gene38097 | -0.802571 | 5.27E-49 | -1.69E-46 |
| MS.gene056550 | MS.gene38097 | 0.81445 | 1.53E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene38097 | -0.830673 | 2.57E-55 | -1.69E-46 |
| MS.gene056856 | MS.gene38097 | 0.80916 | 2.17E-50 | -1.69E-46 |
| MS.gene056942 | MS.gene38097 | -0.805815 | 1.11E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene38097 | 0.856655 | 2.78E-62 | -1.69E-46 |
| MS.gene057086 | MS.gene38097 | -0.816146 | 6.43E-52 | -1.69E-46 |
| MS.gene057473 | MS.gene38097 | 0.817543 | 3.12E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene38097 | -0.807855 | 4.12E-50 | -1.69E-46 |
| MS.gene058041 | MS.gene38097 | -0.809467 | 1.87E-50 | -1.69E-46 |
| MS.gene058068 | MS.gene38097 | 0.818142 | 2.29E-52 | -1.69E-46 |
| MS.gene058093 | MS.gene38097 | 0.834134 | 3.57E-56 | -1.69E-46 |
| MS.gene058099 | MS.gene38097 | 0.874851 | 4.89E-68 | -1.69E-46 |
| MS.gene058108 | MS.gene38097 | 0.879657 | 1.04E-69 | -1.69E-46 |
| MS.gene058109 | MS.gene38097 | 0.889207 | 2.98E-73 | -1.69E-46 |
| MS.gene058111 | MS.gene38097 | 0.850542 | 1.59E-60 | -1.69E-46 |
| MS.gene058117 | MS.gene38097 | 0.831554 | 1.56E-55 | -1.69E-46 |
| MS.gene058157 | MS.gene38097 | -0.826184 | 3.12E-54 | -1.69E-46 |
| MS.gene058170 | MS.gene38097 | 0.835897 | 1.28E-56 | -1.69E-46 |
| MS.gene058171 | MS.gene38097 | 0.906739 | 1.08E-80 | -1.69E-46 |
| MS.gene058173 | MS.gene38097 | 0.89853 | 4.85E-77 | -1.69E-46 |
| MS.gene058174 | MS.gene38097 | 0.8401 | 1.07E-57 | -1.69E-46 |
| MS.gene058175 | MS.gene38097 | 0.904992 | 6.87E-80 | -1.69E-46 |
| MS.gene058179 | MS.gene38097 | 0.84557 | 3.74E-59 | -1.69E-46 |
| MS.gene058180 | MS.gene38097 | 0.837698 | 4.46E-57 | -1.69E-46 |
| MS.gene058268 | MS.gene38097 | 0.832027 | 1.19E-55 | -1.69E-46 |
| MS.gene058269 | MS.gene38097 | 0.839316 | 1.70E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene38097 | -0.834449 | 2.98E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene38097 | -0.815386 | 9.49E-52 | -1.69E-46 |
| MS.gene058420 | MS.gene38097 | -0.801112 | 1.05E-48 | -1.69E-46 |
| MS.gene058493 | MS.gene38097 | 0.831531 | 1.58E-55 | -1.69E-46 |
| MS.gene058494 | MS.gene38097 | 0.818415 | 1.98E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene38097 | -0.815175 | 1.06E-51 | -1.69E-46 |
| MS.gene058628 | MS.gene38097 | 0.813634 | 2.32E-51 | -1.69E-46 |
| MS.gene058629 | MS.gene38097 | 0.816192 | 6.28E-52 | -1.69E-46 |
| MS.gene058630 | MS.gene38097 | 0.818307 | 2.10E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene38097 | -0.816772 | 4.66E-52 | -1.69E-46 |
| MS.gene05883 | MS.gene38097 | -0.807934 | 3.97E-50 | -1.69E-46 |
| MS.gene058840 | MS.gene38097 | 0.86122 | 1.20E-63 | -1.69E-46 |
| MS.gene05884 | MS.gene38097 | 0.811249 | 7.69E-51 | -1.69E-46 |
| MS.gene058978 | MS.gene38097 | 0.822498 | 2.29E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene38097 | -0.859879 | 3.05E-63 | -1.69E-46 |
| MS.gene059023 | MS.gene38097 | -0.800388 | 1.48E-48 | -1.69E-46 |
| MS.gene059034 | MS.gene38097 | -0.801316 | 9.54E-49 | -1.69E-46 |
| MS.gene059037 | MS.gene38097 | 0.860789 | 1.62E-63 | -1.69E-46 |
| MS.gene059038 | MS.gene38097 | 0.806779 | 6.97E-50 | -1.69E-46 |
| MS.gene059044 | MS.gene38097 | 0.808321 | 3.28E-50 | -1.69E-46 |
| MS.gene059045 | MS.gene38097 | 0.880966 | 3.55E-70 | -1.69E-46 |
| MS.gene059052 | MS.gene38097 | 0.812318 | 4.50E-51 | -1.69E-46 |
| MS.gene05913 | MS.gene38097 | -0.802175 | 6.36E-49 | -1.69E-46 |
| MS.gene059223 | MS.gene38097 | 0.846318 | 2.34E-59 | -1.69E-46 |
| MS.gene059367 | MS.gene38097 | -0.864729 | 9.86E-65 | -1.69E-46 |
| MS.gene059368 | MS.gene38097 | -0.815207 | 1.04E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene38097 | -0.813124 | 3.00E-51 | -1.69E-46 |
| MS.gene059680 | MS.gene38097 | -0.809747 | 1.62E-50 | -1.69E-46 |
| MS.gene059690 | MS.gene38097 | 0.850376 | 1.77E-60 | -1.69E-46 |
| MS.gene059691 | MS.gene38097 | 0.821118 | 4.78E-53 | -1.69E-46 |
| MS.gene059694 | MS.gene38097 | 0.850864 | 1.29E-60 | -1.69E-46 |
| MS.gene059697 | MS.gene38097 | 0.852886 | 3.44E-61 | -1.69E-46 |
| MS.gene059718 | MS.gene38097 | -0.82806 | 1.11E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene38097 | -0.864151 | 1.49E-64 | -1.69E-46 |
| MS.gene059902 | MS.gene38097 | -0.809531 | 1.81E-50 | -1.69E-46 |
| MS.gene059916 | MS.gene38097 | 0.83169 | 1.45E-55 | -1.69E-46 |
| MS.gene059943 | MS.gene38097 | 0.862688 | 4.25E-64 | -1.69E-46 |
| MS.gene059944 | MS.gene38097 | 0.843596 | 1.27E-58 | -1.69E-46 |
| MS.gene059955 | MS.gene38097 | 0.802128 | 6.50E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene38097 | -0.803681 | 3.10E-49 | -1.69E-46 |
| MS.gene060187 | MS.gene38097 | 0.822182 | 2.72E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene38097 | -0.874491 | 6.48E-68 | -1.69E-46 |
| MS.gene060595 | MS.gene38097 | 0.822501 | 2.29E-53 | -1.69E-46 |
| MS.gene060602 | MS.gene38097 | 0.806181 | 9.32E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene38097 | -0.813709 | 2.23E-51 | -1.69E-46 |
| MS.gene06074 | MS.gene38097 | 0.823556 | 1.30E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene38097 | -0.822425 | 2.38E-53 | -1.69E-46 |
| MS.gene060778 | MS.gene38097 | -0.8385 | 2.77E-57 | -1.69E-46 |
| MS.gene06077 | MS.gene38097 | -0.869878 | 2.23E-66 | -1.69E-46 |
| MS.gene060808 | MS.gene38097 | 0.81969 | 1.02E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene38097 | -0.817066 | 4.00E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056487 | MS.gene38097 | PPI |
| MS.gene55382 | MS.gene38097 | PPI |
| MS.gene42146 | MS.gene38097 | PPI |
| MS.gene97980 | MS.gene38097 | PPI |
| MS.gene024362 | MS.gene38097 | PPI |
| MS.gene42873 | MS.gene38097 | PPI |
| MS.gene008794 | MS.gene38097 | PPI |
| MS.gene50700 | MS.gene38097 | PPI |
| MS.gene23359 | MS.gene38097 | PPI |
| MS.gene008793 | MS.gene38097 | PPI |
| MS.gene003638 | MS.gene38097 | PPI |
| MS.gene98697 | MS.gene38097 | PPI |
| MS.gene93058 | MS.gene38097 | PPI |
| MS.gene62620 | MS.gene38097 | PPI |
| MS.gene056488 | MS.gene38097 | PPI |
| MS.gene91446 | MS.gene38097 | PPI |
| MS.gene53169 | MS.gene38097 | PPI |
| MS.gene93059 | MS.gene38097 | PPI |
| MS.gene72560 | MS.gene38097 | PPI |
| MS.gene99693 | MS.gene38097 | PPI |
| MS.gene38097 | MS.gene93783 | PPI |
| MS.gene040151 | MS.gene38097 | PPI |
| MS.gene97981 | MS.gene38097 | PPI |
| MS.gene062932 | MS.gene38097 | PPI |
| MS.gene54933 | MS.gene38097 | PPI |
| MS.gene95889 | MS.gene38097 | PPI |
| MS.gene93783 | MS.gene38097 | PPI |
| MS.gene87111 | MS.gene38097 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38097.t1 | MTR_5g097900 | 96.795 | 312 | 10 | 0 | 1 | 312 | 1 | 312 | 0.0 | 624 |
| MS.gene38097.t1 | MTR_5g097910 | 96.474 | 312 | 11 | 0 | 1 | 312 | 1 | 312 | 0.0 | 623 |
| MS.gene38097.t1 | MTR_5g097940 | 96.474 | 312 | 11 | 0 | 1 | 312 | 1 | 312 | 0.0 | 623 |
| MS.gene38097.t1 | MTR_3g083130 | 68.831 | 308 | 95 | 1 | 6 | 312 | 7 | 314 | 1.18e-163 | 458 |
| MS.gene38097.t1 | MTR_0374s0050 | 62.623 | 305 | 111 | 3 | 1 | 302 | 1 | 305 | 1.88e-136 | 389 |
| MS.gene38097.t1 | MTR_4g072320 | 52.508 | 299 | 132 | 4 | 1 | 297 | 1 | 291 | 5.28e-102 | 301 |
| MS.gene38097.t1 | MTR_4g072350 | 51.485 | 303 | 135 | 5 | 20 | 311 | 17 | 318 | 1.20e-99 | 296 |
| MS.gene38097.t1 | MTR_4g072360 | 50.000 | 300 | 144 | 4 | 1 | 297 | 1 | 297 | 4.29e-99 | 295 |
| MS.gene38097.t1 | MTR_6g073110 | 49.505 | 303 | 147 | 4 | 1 | 300 | 1 | 300 | 6.08e-97 | 289 |
| MS.gene38097.t1 | MTR_8g070095 | 42.958 | 284 | 159 | 2 | 19 | 300 | 15 | 297 | 1.29e-75 | 234 |
| MS.gene38097.t1 | MTR_4g036845 | 41.404 | 285 | 162 | 4 | 18 | 300 | 12 | 293 | 1.74e-72 | 226 |
| MS.gene38097.t1 | MTR_7g063580 | 43.382 | 272 | 142 | 3 | 49 | 311 | 83 | 351 | 6.20e-71 | 224 |
| MS.gene38097.t1 | MTR_8g070115 | 43.056 | 288 | 153 | 4 | 19 | 302 | 15 | 295 | 1.67e-70 | 221 |
| MS.gene38097.t1 | MTR_4g021350 | 43.434 | 297 | 151 | 6 | 19 | 310 | 15 | 299 | 4.06e-67 | 213 |
| MS.gene38097.t1 | MTR_4g021350 | 43.772 | 281 | 143 | 5 | 19 | 294 | 15 | 285 | 7.78e-65 | 206 |
| MS.gene38097.t1 | MTR_4g021410 | 41.967 | 305 | 149 | 6 | 19 | 312 | 16 | 303 | 8.59e-64 | 204 |
| MS.gene38097.t1 | MTR_4g021410 | 42.857 | 273 | 136 | 4 | 48 | 312 | 6 | 266 | 2.06e-60 | 194 |
| MS.gene38097.t1 | MTR_4g021450 | 42.553 | 282 | 148 | 3 | 19 | 300 | 16 | 283 | 2.58e-60 | 195 |
| MS.gene38097.t1 | MTR_4g072060 | 39.145 | 304 | 170 | 6 | 18 | 310 | 9 | 308 | 6.31e-59 | 191 |
| MS.gene38097.t1 | MTR_7g070500 | 38.163 | 283 | 166 | 6 | 20 | 300 | 23 | 298 | 2.78e-58 | 190 |
| MS.gene38097.t1 | MTR_7g070500 | 38.321 | 274 | 161 | 5 | 20 | 292 | 23 | 289 | 9.63e-58 | 188 |
| MS.gene38097.t1 | MTR_4g021410 | 41.423 | 239 | 120 | 4 | 82 | 312 | 1 | 227 | 5.30e-46 | 155 |
| MS.gene38097.t1 | MTR_4g021450 | 42.466 | 219 | 114 | 2 | 82 | 300 | 1 | 207 | 2.81e-43 | 148 |
| MS.gene38097.t1 | MTR_4g021450 | 42.405 | 158 | 88 | 1 | 143 | 300 | 10 | 164 | 2.44e-37 | 132 |
| MS.gene38097.t1 | MTR_6g072650 | 44.218 | 147 | 46 | 5 | 176 | 311 | 13 | 134 | 3.22e-27 | 103 |
| MS.gene38097.t1 | MTR_6g072710 | 46.018 | 113 | 56 | 2 | 191 | 300 | 1 | 111 | 8.26e-26 | 99.4 |
| MS.gene38097.t1 | MTR_3g449790 | 27.055 | 292 | 147 | 10 | 34 | 285 | 73 | 338 | 3.12e-18 | 84.3 |
| MS.gene38097.t1 | MTR_3g449790 | 26.510 | 298 | 147 | 11 | 34 | 285 | 73 | 344 | 5.11e-17 | 80.9 |
| MS.gene38097.t1 | MTR_7g114990 | 25.260 | 289 | 152 | 11 | 41 | 290 | 52 | 315 | 3.33e-13 | 69.7 |
| MS.gene38097.t1 | MTR_7g021850 | 25.087 | 287 | 161 | 9 | 41 | 292 | 43 | 310 | 1.34e-11 | 64.7 |
| MS.gene38097.t1 | MTR_1g102750 | 23.226 | 310 | 167 | 10 | 24 | 290 | 29 | 310 | 7.87e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38097.t1 | AT1G59960 | 54.221 | 308 | 130 | 6 | 1 | 300 | 1 | 305 | 1.90e-114 | 334 |
| MS.gene38097.t1 | AT1G59950 | 56.250 | 288 | 116 | 5 | 20 | 300 | 15 | 299 | 4.37e-106 | 312 |
| MS.gene38097.t1 | AT2G37770 | 44.755 | 286 | 147 | 4 | 19 | 300 | 15 | 293 | 3.84e-78 | 241 |
| MS.gene38097.t1 | AT2G37790 | 43.706 | 286 | 150 | 4 | 19 | 300 | 15 | 293 | 1.98e-77 | 239 |
| MS.gene38097.t1 | AT5G62420 | 43.310 | 284 | 155 | 4 | 20 | 300 | 14 | 294 | 2.62e-73 | 228 |
| MS.gene38097.t1 | AT2G37760 | 44.014 | 284 | 146 | 4 | 19 | 299 | 15 | 288 | 4.46e-73 | 227 |
| MS.gene38097.t1 | AT2G37760 | 44.014 | 284 | 146 | 4 | 19 | 299 | 15 | 288 | 4.46e-73 | 227 |
| MS.gene38097.t1 | AT2G37760 | 44.484 | 281 | 143 | 4 | 19 | 296 | 15 | 285 | 3.49e-72 | 225 |
| MS.gene38097.t1 | AT5G01670 | 41.901 | 284 | 156 | 6 | 19 | 300 | 23 | 299 | 3.54e-72 | 226 |
| MS.gene38097.t1 | AT2G37760 | 43.816 | 283 | 146 | 4 | 19 | 298 | 15 | 287 | 2.29e-71 | 223 |
| MS.gene38097.t1 | AT2G37760 | 43.816 | 283 | 146 | 4 | 19 | 298 | 15 | 287 | 2.29e-71 | 223 |
| MS.gene38097.t1 | AT3G53880 | 42.049 | 283 | 159 | 3 | 19 | 300 | 15 | 293 | 2.70e-70 | 221 |
| MS.gene38097.t1 | AT3G53880 | 42.143 | 280 | 151 | 4 | 19 | 294 | 15 | 287 | 6.07e-68 | 215 |
| MS.gene38097.t1 | AT2G21260 | 39.100 | 289 | 161 | 6 | 18 | 295 | 9 | 293 | 8.77e-67 | 211 |
| MS.gene38097.t1 | AT5G01670 | 38.264 | 311 | 156 | 7 | 19 | 300 | 23 | 326 | 3.25e-66 | 211 |
| MS.gene38097.t1 | AT2G21250 | 37.829 | 304 | 174 | 6 | 18 | 310 | 9 | 308 | 1.96e-65 | 208 |
| MS.gene38097.t1 | AT2G37760 | 43.750 | 240 | 128 | 3 | 62 | 298 | 6 | 241 | 8.40e-59 | 189 |
| MS.gene38097.t1 | AT2G37760 | 43.750 | 240 | 128 | 3 | 62 | 298 | 6 | 241 | 8.40e-59 | 189 |
| MS.gene38097.t1 | AT2G37770 | 47.716 | 197 | 93 | 3 | 19 | 212 | 15 | 204 | 2.85e-54 | 179 |
| MS.gene38097.t1 | AT2G21250 | 42.029 | 207 | 109 | 5 | 18 | 217 | 9 | 211 | 9.30e-48 | 160 |
| MS.gene38097.t1 | AT2G21260 | 35.000 | 220 | 130 | 5 | 87 | 295 | 8 | 225 | 1.67e-41 | 144 |
| MS.gene38097.t1 | AT1G06690 | 27.682 | 289 | 153 | 9 | 35 | 285 | 85 | 355 | 3.04e-20 | 90.5 |
| MS.gene38097.t1 | AT5G53580 | 25.263 | 285 | 156 | 11 | 44 | 289 | 80 | 346 | 2.70e-15 | 75.9 |
| MS.gene38097.t1 | AT1G60680 | 26.101 | 318 | 171 | 14 | 25 | 300 | 27 | 322 | 1.35e-13 | 70.9 |
| MS.gene38097.t1 | AT1G60690 | 24.768 | 323 | 168 | 14 | 25 | 300 | 27 | 321 | 2.89e-11 | 63.9 |
| MS.gene38097.t1 | AT1G60750 | 25.532 | 282 | 160 | 12 | 44 | 300 | 50 | 306 | 6.60e-11 | 62.8 |
Find 70 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCAAAGATACGTAAATTT+TGG | 0.162109 | 5.1:-78322180 | None:intergenic |
| ATTGGAAATGAAAACTTTCC+AGG | 0.287256 | 5.1:-78321639 | None:intergenic |
| TGCTTGCACCTTTCCTCAAC+GGG | 0.292412 | 5.1:-78322012 | None:intergenic |
| TGGACTTGTATTTGATTCAT+TGG | 0.320809 | 5.1:+78321601 | MS.gene38097:CDS |
| GTGTCTATAACCTTGTTTGA+TGG | 0.333209 | 5.1:-78321153 | None:intergenic |
| CTTTGTCACTTCCAAACTTT+GGG | 0.341927 | 5.1:+78321268 | MS.gene38097:CDS |
| TCATTCTCCATAACTTCATT+TGG | 0.362803 | 5.1:-78322040 | None:intergenic |
| TCTTTCTTACATGTGAAGTC+AGG | 0.371382 | 5.1:-78321107 | None:intergenic |
| AAAATTTACGTATCTTTGAT+TGG | 0.375055 | 5.1:+78322182 | MS.gene38097:CDS |
| CATTTGATGTGAAAGGTGTT+TGG | 0.375654 | 5.1:+78321682 | MS.gene38097:CDS |
| CTTGGACTCACTAAAGCTAT+TGG | 0.375778 | 5.1:+78321729 | MS.gene38097:CDS |
| CAAACACCTTTCACATCAAA+TGG | 0.378027 | 5.1:-78321681 | None:intergenic |
| AAGAGATCTGCCACATCAAT+TGG | 0.378807 | 5.1:-78321657 | None:intergenic |
| TCTTTGTCACTTCCAAACTT+TGG | 0.379540 | 5.1:+78321267 | MS.gene38097:CDS |
| AGTCCGGGCTTGGTTGGTCC+AGG | 0.391423 | 5.1:-78322262 | None:intergenic |
| ATCATAGAGGTCATTGAGTC+CGG | 0.411816 | 5.1:-78322278 | None:intergenic |
| ATTTGATGTGAAAGGTGTTT+GGG | 0.418218 | 5.1:+78321683 | MS.gene38097:CDS |
| TTGAAAGAGGCAATTGAACT+TGG | 0.422526 | 5.1:+78321224 | MS.gene38097:CDS |
| TCTCTCCTTATCATAGCTCT+TGG | 0.432328 | 5.1:-78322152 | None:intergenic |
| TGTTCCCAAGAGCTATGATA+AGG | 0.434816 | 5.1:+78322147 | MS.gene38097:CDS |
| CTCTCCTTATCATAGCTCTT+GGG | 0.442349 | 5.1:-78322151 | None:intergenic |
| GAGGTCATTGAGTCCGGGCT+TGG | 0.446240 | 5.1:-78322272 | None:intergenic |
| CAGGGGACCAAATGAAGTTA+TGG | 0.449659 | 5.1:+78322033 | MS.gene38097:CDS |
| AAGCAAAATCGTTTGATCCC+TGG | 0.455139 | 5.1:+78322244 | MS.gene38097:CDS |
| CGTTGAGGAAAGGTGCAAGC+AGG | 0.464952 | 5.1:+78322014 | MS.gene38097:CDS |
| GACTCTTCAACTAGACTACT+TGG | 0.469433 | 5.1:+78321581 | MS.gene38097:CDS |
| CTGCTTGCACCTTTCCTCAA+CGG | 0.474588 | 5.1:-78322013 | None:intergenic |
| ATCCCTGGACCAACCAAGCC+CGG | 0.482612 | 5.1:+78322259 | MS.gene38097:CDS |
| TGTTGGTAAGAACCTTTGTT+GGG | 0.483158 | 5.1:-78321040 | None:intergenic |
| AAGTTTCAAGCTTTCCTCCA+TGG | 0.483539 | 5.1:-78321709 | None:intergenic |
| TTTGATACTGCTGCTGCGTA+TGG | 0.491072 | 5.1:+78321176 | MS.gene38097:CDS |
| TATGGCTCAGAACAAGCTCT+TGG | 0.492260 | 5.1:+78321194 | MS.gene38097:CDS |
| ATGGAGGAAAGCTTGAAACT+TGG | 0.498400 | 5.1:+78321711 | MS.gene38097:CDS |
| TTGCACAAATATCTCTAAGA+TGG | 0.499975 | 5.1:+78322101 | MS.gene38097:CDS |
| TCTTGGAGAGGCTTTGAAAG+AGG | 0.506147 | 5.1:+78321211 | MS.gene38097:CDS |
| CTTTCTTACATGTGAAGTCA+GGG | 0.506502 | 5.1:-78321106 | None:intergenic |
| GTGTTGGTAAGAACCTTTGT+TGG | 0.513012 | 5.1:-78321041 | None:intergenic |
| CTCTTACCATTTGATGTGAA+AGG | 0.516557 | 5.1:+78321675 | MS.gene38097:CDS |
| GAAGATGCCTGTGGTTGGAA+TGG | 0.533175 | 5.1:+78321076 | MS.gene38097:CDS |
| GTCCGGGCTTGGTTGGTCCA+GGG | 0.541777 | 5.1:-78322261 | None:intergenic |
| TCATTGAGTCCGGGCTTGGT+TGG | 0.547327 | 5.1:-78322268 | None:intergenic |
| GTTGAGGAAAGGTGCAAGCA+GGG | 0.550606 | 5.1:+78322015 | MS.gene38097:CDS |
| AAGATGCCTGTGGTTGGAAT+GGG | 0.552845 | 5.1:+78321077 | MS.gene38097:CDS |
| TCTATATTTAGTCATCATAG+AGG | 0.553846 | 5.1:-78322291 | None:intergenic |
| AAGGTTCTTACCAACACTCC+TGG | 0.555463 | 5.1:+78321047 | MS.gene38097:CDS |
| CTTTGATTGGTCATTGACAA+AGG | 0.559604 | 5.1:+78322195 | MS.gene38097:CDS |
| CTTCAGTTGACCAGGAGTGT+TGG | 0.569334 | 5.1:-78321057 | None:intergenic |
| TCATAGAGGTCATTGAGTCC+GGG | 0.574712 | 5.1:-78322277 | None:intergenic |
| AGGTGGAGATGAACCTTGCA+TGG | 0.584406 | 5.1:+78321930 | MS.gene38097:intron |
| GCTGATCCCATTCCAACCAC+AGG | 0.587516 | 5.1:-78321083 | None:intergenic |
| ATCATTGAAGCCATCAAACA+AGG | 0.587661 | 5.1:+78321143 | MS.gene38097:CDS |
| GAAAGGTGTTTGGGAATCCA+TGG | 0.587744 | 5.1:+78321692 | MS.gene38097:CDS |
| CTAAGATGGCTATATGAACA+AGG | 0.588672 | 5.1:+78322115 | MS.gene38097:CDS |
| ACAGGCATCTTCAGTTGACC+AGG | 0.593409 | 5.1:-78321065 | None:intergenic |
| TGAATTACTTGATTGACTGC+AGG | 0.596137 | 5.1:-78321810 | None:intergenic |
| CAACTGAAGATGCCTGTGGT+TGG | 0.604555 | 5.1:+78321071 | MS.gene38097:CDS |
| TGGTCAACTGAAGATGCCTG+TGG | 0.614136 | 5.1:+78321067 | MS.gene38097:CDS |
| TGGCCACTTAGCTCTCAACC+TGG | 0.616515 | 5.1:+78321621 | MS.gene38097:CDS |
| TTTCTTACATGTGAAGTCAG+GGG | 0.620409 | 5.1:-78321105 | None:intergenic |
| TTGAGGAAAGGTGCAAGCAG+GGG | 0.624444 | 5.1:+78322016 | MS.gene38097:CDS |
| TTTCCAGGTTGAGAGCTAAG+TGG | 0.629737 | 5.1:-78321624 | None:intergenic |
| TTTCCTCAACGGGGAAAATG+CGG | 0.632608 | 5.1:-78322002 | None:intergenic |
| AAAGAGATTGCAGATGCACA+TGG | 0.633321 | 5.1:+78322070 | MS.gene38097:CDS |
| CTCAGAACAAGCTCTTGGAG+AGG | 0.635937 | 5.1:+78321199 | MS.gene38097:CDS |
| AGAGCAGGAATAACAAGATG+AGG | 0.638684 | 5.1:-78321305 | None:intergenic |
| TGATTGGTCATTGACAAAGG+AGG | 0.655967 | 5.1:+78322198 | MS.gene38097:CDS |
| TAGTGTTGAAATCCCAACAA+AGG | 0.659490 | 5.1:+78321028 | MS.gene38097:CDS |
| ATTGACTGCAGGAAGAACAG+TGG | 0.718468 | 5.1:-78321799 | None:intergenic |
| AGGTGTTTGGGAATCCATGG+AGG | 0.719619 | 5.1:+78321695 | MS.gene38097:CDS |
| GCTTGCACCTTTCCTCAACG+GGG | 0.723595 | 5.1:-78322011 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTTACGTATCTTTGAT+TGG | + | chr5.1:78322182-78322201 | MS.gene38097:CDS | 20.0% |
| !!! | AATCAAAGATACGTAAATTT+TGG | - | chr5.1:78322183-78322202 | None:intergenic | 20.0% |
| !!! | GTTTAAGTTAATCAAAACTT+AGG | - | chr5.1:78321845-78321864 | None:intergenic | 20.0% |
| ! | AATCTCAATAAGTGTATGTT+TGG | - | chr5.1:78321535-78321554 | None:intergenic | 25.0% |
| ! | TACACTTATTGAGATTAAAC+TGG | + | chr5.1:78321539-78321558 | MS.gene38097:intron | 25.0% |
| ATTGGAAATGAAAACTTTCC+AGG | - | chr5.1:78321642-78321661 | None:intergenic | 30.0% | |
| CGAACTCATATATTTATAGG+TGG | + | chr5.1:78321913-78321932 | MS.gene38097:intron | 30.0% | |
| CGACGAACTCATATATTTAT+AGG | + | chr5.1:78321910-78321929 | MS.gene38097:intron | 30.0% | |
| TCATTCTCCATAACTTCATT+TGG | - | chr5.1:78322043-78322062 | None:intergenic | 30.0% | |
| TGGACTTGTATTTGATTCAT+TGG | + | chr5.1:78321601-78321620 | MS.gene38097:CDS | 30.0% | |
| ! | ATTTTCAGTAACCCAAAGTT+TGG | - | chr5.1:78321282-78321301 | None:intergenic | 30.0% |
| ! | GTTTTCATTTCCAATTGATG+TGG | + | chr5.1:78321647-78321666 | MS.gene38097:CDS | 30.0% |
| ! | TTGCACAAATATCTCTAAGA+TGG | + | chr5.1:78322101-78322120 | MS.gene38097:CDS | 30.0% |
| !! | ATTTGATGTGAAAGGTGTTT+GGG | + | chr5.1:78321683-78321702 | MS.gene38097:CDS | 30.0% |
| ATCATTGAAGCCATCAAACA+AGG | + | chr5.1:78321143-78321162 | MS.gene38097:CDS | 35.0% | |
| CAAACACCTTTCACATCAAA+TGG | - | chr5.1:78321684-78321703 | None:intergenic | 35.0% | |
| CTAAGATGGCTATATGAACA+AGG | + | chr5.1:78322115-78322134 | MS.gene38097:CDS | 35.0% | |
| CTCTTACCATTTGATGTGAA+AGG | + | chr5.1:78321675-78321694 | MS.gene38097:CDS | 35.0% | |
| CTTTCTTACATGTGAAGTCA+GGG | - | chr5.1:78321109-78321128 | None:intergenic | 35.0% | |
| TCTTTCTTACATGTGAAGTC+AGG | - | chr5.1:78321110-78321129 | None:intergenic | 35.0% | |
| TGAATTACTTGATTGACTGC+AGG | - | chr5.1:78321813-78321832 | None:intergenic | 35.0% | |
| TTGAAAGAGGCAATTGAACT+TGG | + | chr5.1:78321224-78321243 | MS.gene38097:CDS | 35.0% | |
| TTTCTTACATGTGAAGTCAG+GGG | - | chr5.1:78321108-78321127 | None:intergenic | 35.0% | |
| ! | CTTTGATTGGTCATTGACAA+AGG | + | chr5.1:78322195-78322214 | MS.gene38097:CDS | 35.0% |
| ! | CTTTGTCACTTCCAAACTTT+GGG | + | chr5.1:78321268-78321287 | MS.gene38097:CDS | 35.0% |
| ! | GTGTCTATAACCTTGTTTGA+TGG | - | chr5.1:78321156-78321175 | None:intergenic | 35.0% |
| ! | TAGTGTTGAAATCCCAACAA+AGG | + | chr5.1:78321028-78321047 | MS.gene38097:CDS | 35.0% |
| ! | TCTTTGTCACTTCCAAACTT+TGG | + | chr5.1:78321267-78321286 | MS.gene38097:CDS | 35.0% |
| ! | TGTTGGTAAGAACCTTTGTT+GGG | - | chr5.1:78321043-78321062 | None:intergenic | 35.0% |
| ! | TTGAGAGATTTTTGTAGAGC+AGG | - | chr5.1:78321323-78321342 | None:intergenic | 35.0% |
| !! | CATTTGATGTGAAAGGTGTT+TGG | + | chr5.1:78321682-78321701 | MS.gene38097:CDS | 35.0% |
| AAAGAGATTGCAGATGCACA+TGG | + | chr5.1:78322070-78322089 | MS.gene38097:CDS | 40.0% | |
| AAGAGATCTGCCACATCAAT+TGG | - | chr5.1:78321660-78321679 | None:intergenic | 40.0% | |
| AAGCAAAATCGTTTGATCCC+TGG | + | chr5.1:78322244-78322263 | MS.gene38097:CDS | 40.0% | |
| AAGTTTCAAGCTTTCCTCCA+TGG | - | chr5.1:78321712-78321731 | None:intergenic | 40.0% | |
| AGAGCAGGAATAACAAGATG+AGG | - | chr5.1:78321308-78321327 | None:intergenic | 40.0% | |
| ATCATAGAGGTCATTGAGTC+CGG | - | chr5.1:78322281-78322300 | None:intergenic | 40.0% | |
| ATGGAGGAAAGCTTGAAACT+TGG | + | chr5.1:78321711-78321730 | MS.gene38097:CDS | 40.0% | |
| CTCTCCTTATCATAGCTCTT+GGG | - | chr5.1:78322154-78322173 | None:intergenic | 40.0% | |
| CTTGGACTCACTAAAGCTAT+TGG | + | chr5.1:78321729-78321748 | MS.gene38097:CDS | 40.0% | |
| GACTCTTCAACTAGACTACT+TGG | + | chr5.1:78321581-78321600 | MS.gene38097:CDS | 40.0% | |
| TCTCTCCTTATCATAGCTCT+TGG | - | chr5.1:78322155-78322174 | None:intergenic | 40.0% | |
| TGTTCCCAAGAGCTATGATA+AGG | + | chr5.1:78322147-78322166 | MS.gene38097:CDS | 40.0% | |
| ! | GTGTTGGTAAGAACCTTTGT+TGG | - | chr5.1:78321044-78321063 | None:intergenic | 40.0% |
| ! | TGATTGGTCATTGACAAAGG+AGG | + | chr5.1:78322198-78322217 | MS.gene38097:CDS | 40.0% |
| !! | TGGATTTGTTGATTTCGTGC+AGG | + | chr5.1:78321559-78321578 | MS.gene38097:intron | 40.0% |
| AAGATGCCTGTGGTTGGAAT+GGG | + | chr5.1:78321077-78321096 | MS.gene38097:CDS | 45.0% | |
| AAGGTTCTTACCAACACTCC+TGG | + | chr5.1:78321047-78321066 | MS.gene38097:CDS | 45.0% | |
| ATTGACTGCAGGAAGAACAG+TGG | - | chr5.1:78321802-78321821 | None:intergenic | 45.0% | |
| CAGGGGACCAAATGAAGTTA+TGG | + | chr5.1:78322033-78322052 | MS.gene38097:CDS | 45.0% | |
| TATGGCTCAGAACAAGCTCT+TGG | + | chr5.1:78321194-78321213 | MS.gene38097:CDS | 45.0% | |
| TCATAGAGGTCATTGAGTCC+GGG | - | chr5.1:78322280-78322299 | None:intergenic | 45.0% | |
| TTTCCTCAACGGGGAAAATG+CGG | - | chr5.1:78322005-78322024 | None:intergenic | 45.0% | |
| TTTGATACTGCTGCTGCGTA+TGG | + | chr5.1:78321176-78321195 | MS.gene38097:CDS | 45.0% | |
| ! | AGAGAGTTTTGCAACGCACA+CGG | + | chr5.1:78321968-78321987 | MS.gene38097:CDS | 45.0% |
| ! | GCTTCTTTTGTTGCCATGCA+AGG | - | chr5.1:78321946-78321965 | None:intergenic | 45.0% |
| ! | TTTCCAGGTTGAGAGCTAAG+TGG | - | chr5.1:78321627-78321646 | None:intergenic | 45.0% |
| !! | GAAAGGTGTTTGGGAATCCA+TGG | + | chr5.1:78321692-78321711 | MS.gene38097:CDS | 45.0% |
| !! | TCTTGGAGAGGCTTTGAAAG+AGG | + | chr5.1:78321211-78321230 | MS.gene38097:CDS | 45.0% |
| ACAGGCATCTTCAGTTGACC+AGG | - | chr5.1:78321068-78321087 | None:intergenic | 50.0% | |
| AGGTGGAGATGAACCTTGCA+TGG | + | chr5.1:78321930-78321949 | MS.gene38097:intron | 50.0% | |
| AGGTGTTTGGGAATCCATGG+AGG | + | chr5.1:78321695-78321714 | MS.gene38097:CDS | 50.0% | |
| CAACTGAAGATGCCTGTGGT+TGG | + | chr5.1:78321071-78321090 | MS.gene38097:CDS | 50.0% | |
| CTCAGAACAAGCTCTTGGAG+AGG | + | chr5.1:78321199-78321218 | MS.gene38097:CDS | 50.0% | |
| CTGCTTGCACCTTTCCTCAA+CGG | - | chr5.1:78322016-78322035 | None:intergenic | 50.0% | |
| GAAGATGCCTGTGGTTGGAA+TGG | + | chr5.1:78321076-78321095 | MS.gene38097:CDS | 50.0% | |
| TGCTTGCACCTTTCCTCAAC+GGG | - | chr5.1:78322015-78322034 | None:intergenic | 50.0% | |
| TGGTCAACTGAAGATGCCTG+TGG | + | chr5.1:78321067-78321086 | MS.gene38097:CDS | 50.0% | |
| ! | CTTCAGTTGACCAGGAGTGT+TGG | - | chr5.1:78321060-78321079 | None:intergenic | 50.0% |
| ! | GCATTTTCCCCGTTGAGGAA+AGG | + | chr5.1:78322004-78322023 | MS.gene38097:CDS | 50.0% |
| ! | GTTGAGGAAAGGTGCAAGCA+GGG | + | chr5.1:78322015-78322034 | MS.gene38097:CDS | 50.0% |
| ! | TAACCGCATTTTCCCCGTTG+AGG | + | chr5.1:78321999-78322018 | MS.gene38097:CDS | 50.0% |
| ! | TTGAGGAAAGGTGCAAGCAG+GGG | + | chr5.1:78322016-78322035 | MS.gene38097:CDS | 50.0% |
| GCTGATCCCATTCCAACCAC+AGG | - | chr5.1:78321086-78321105 | None:intergenic | 55.0% | |
| GCTTGCACCTTTCCTCAACG+GGG | - | chr5.1:78322014-78322033 | None:intergenic | 55.0% | |
| ! | CGTTGAGGAAAGGTGCAAGC+AGG | + | chr5.1:78322014-78322033 | MS.gene38097:CDS | 55.0% |
| ! | TCATTGAGTCCGGGCTTGGT+TGG | - | chr5.1:78322271-78322290 | None:intergenic | 55.0% |
| ! | TGGCCACTTAGCTCTCAACC+TGG | + | chr5.1:78321621-78321640 | MS.gene38097:CDS | 55.0% |
| ATCCCTGGACCAACCAAGCC+CGG | + | chr5.1:78322259-78322278 | MS.gene38097:CDS | 60.0% | |
| GAGGTCATTGAGTCCGGGCT+TGG | - | chr5.1:78322275-78322294 | None:intergenic | 60.0% | |
| ! | AGTCCGGGCTTGGTTGGTCC+AGG | - | chr5.1:78322265-78322284 | None:intergenic | 65.0% |
| ! | GTCCGGGCTTGGTTGGTCCA+GGG | - | chr5.1:78322264-78322283 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 78321023 | 78322306 | 78321023 | ID=MS.gene38097 |
| chr5.1 | mRNA | 78321023 | 78322306 | 78321023 | ID=MS.gene38097.t1;Parent=MS.gene38097 |
| chr5.1 | exon | 78321023 | 78321342 | 78321023 | ID=MS.gene38097.t1.exon1;Parent=MS.gene38097.t1 |
| chr5.1 | CDS | 78321023 | 78321342 | 78321023 | ID=cds.MS.gene38097.t1;Parent=MS.gene38097.t1 |
| chr5.1 | exon | 78321581 | 78321824 | 78321581 | ID=MS.gene38097.t1.exon2;Parent=MS.gene38097.t1 |
| chr5.1 | CDS | 78321581 | 78321824 | 78321581 | ID=cds.MS.gene38097.t1;Parent=MS.gene38097.t1 |
| chr5.1 | exon | 78321932 | 78322306 | 78321932 | ID=MS.gene38097.t1.exon3;Parent=MS.gene38097.t1 |
| chr5.1 | CDS | 78321932 | 78322306 | 78321932 | ID=cds.MS.gene38097.t1;Parent=MS.gene38097.t1 |
| Gene Sequence |
| Protein sequence |
