Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54410.t1 | XP_003621050.1 | 98.6 | 443 | 6 | 0 | 1 | 443 | 1 | 443 | 7.20E-241 | 842.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54410.t1 | A8KYS5 | 50.8 | 356 | 166 | 4 | 90 | 437 | 12 | 366 | 1.8e-86 | 321.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54410.t1 | G7KXR2 | 98.6 | 443 | 6 | 0 | 1 | 443 | 1 | 443 | 5.2e-241 | 842.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene54410 | -0.833116 | 6.42E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene54410 | -0.832077 | 1.16E-55 | -1.69E-46 |
| MS.gene049232 | MS.gene54410 | -0.830279 | 3.21E-55 | -1.69E-46 |
| MS.gene049281 | MS.gene54410 | 0.803753 | 3.00E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene54410 | -0.839165 | 1.87E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene54410 | -0.838115 | 3.48E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene54410 | -0.828728 | 7.65E-55 | -1.69E-46 |
| MS.gene049611 | MS.gene54410 | 0.813596 | 2.36E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene54410 | -0.861966 | 7.08E-64 | -1.69E-46 |
| MS.gene050163 | MS.gene54410 | -0.802387 | 5.75E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene54410 | -0.842444 | 2.58E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene54410 | -0.835264 | 1.86E-56 | -1.69E-46 |
| MS.gene050381 | MS.gene54410 | 0.831447 | 1.66E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene54410 | -0.863121 | 3.12E-64 | -1.69E-46 |
| MS.gene050502 | MS.gene54410 | -0.82301 | 1.74E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene54410 | -0.85942 | 4.19E-63 | -1.69E-46 |
| MS.gene050518 | MS.gene54410 | -0.828572 | 8.35E-55 | -1.69E-46 |
| MS.gene050538 | MS.gene54410 | -0.804196 | 2.43E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene54410 | -0.804414 | 2.19E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene54410 | -0.844853 | 5.85E-59 | -1.69E-46 |
| MS.gene050647 | MS.gene54410 | 0.801838 | 7.45E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene54410 | -0.852688 | 3.92E-61 | -1.69E-46 |
| MS.gene050699 | MS.gene54410 | -0.846711 | 1.83E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene54410 | -0.849997 | 2.26E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene54410 | -0.846139 | 2.62E-59 | -1.69E-46 |
| MS.gene05080 | MS.gene54410 | -0.805739 | 1.15E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene54410 | -0.830574 | 2.72E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene54410 | -0.831355 | 1.75E-55 | -1.69E-46 |
| MS.gene050883 | MS.gene54410 | 0.822742 | 2.01E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene54410 | -0.857096 | 2.06E-62 | -1.69E-46 |
| MS.gene050986 | MS.gene54410 | -0.842841 | 2.02E-58 | -1.69E-46 |
| MS.gene05104 | MS.gene54410 | 0.816704 | 4.82E-52 | -1.69E-46 |
| MS.gene051127 | MS.gene54410 | 0.837235 | 5.86E-57 | -1.69E-46 |
| MS.gene051268 | MS.gene54410 | -0.815289 | 9.98E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene54410 | 0.824019 | 1.01E-53 | -1.69E-46 |
| MS.gene051366 | MS.gene54410 | 0.819246 | 1.28E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene54410 | -0.826923 | 2.08E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene54410 | -0.821145 | 4.72E-53 | -1.69E-46 |
| MS.gene051946 | MS.gene54410 | 0.808944 | 2.41E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene54410 | -0.810045 | 1.40E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene54410 | -0.812058 | 5.13E-51 | -1.69E-46 |
| MS.gene052486 | MS.gene54410 | -0.822707 | 2.05E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene54410 | -0.810169 | 1.32E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene54410 | -0.819265 | 1.27E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene54410 | -0.812434 | 4.25E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene54410 | -0.809882 | 1.52E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene54410 | -0.816633 | 5.00E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene54410 | -0.835529 | 1.59E-56 | -1.69E-46 |
| MS.gene053018 | MS.gene54410 | -0.810827 | 9.50E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene54410 | -0.870121 | 1.85E-66 | -1.69E-46 |
| MS.gene053213 | MS.gene54410 | -0.853884 | 1.78E-61 | -1.69E-46 |
| MS.gene053286 | MS.gene54410 | -0.855768 | 5.06E-62 | -1.69E-46 |
| MS.gene053420 | MS.gene54410 | 0.825248 | 5.20E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene54410 | -0.859655 | 3.56E-63 | -1.69E-46 |
| MS.gene053479 | MS.gene54410 | -0.838316 | 3.09E-57 | -1.69E-46 |
| MS.gene053561 | MS.gene54410 | 0.802774 | 4.78E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene54410 | -0.853425 | 2.41E-61 | -1.69E-46 |
| MS.gene053626 | MS.gene54410 | -0.818327 | 2.08E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene54410 | -0.812305 | 4.53E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene54410 | -0.823904 | 1.08E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene54410 | -0.837294 | 5.66E-57 | -1.69E-46 |
| MS.gene054600 | MS.gene54410 | -0.812127 | 4.96E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene54410 | -0.828427 | 9.05E-55 | -1.69E-46 |
| MS.gene054706 | MS.gene54410 | 0.808698 | 2.73E-50 | -1.69E-46 |
| MS.gene054707 | MS.gene54410 | 0.80415 | 2.48E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene54410 | 0.817376 | 3.41E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene54410 | -0.803597 | 3.23E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene54410 | -0.848938 | 4.45E-60 | -1.69E-46 |
| MS.gene055154 | MS.gene54410 | 0.817956 | 2.52E-52 | -1.69E-46 |
| MS.gene055224 | MS.gene54410 | -0.801516 | 8.68E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene54410 | -0.853443 | 2.38E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene54410 | -0.837605 | 4.71E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene54410 | -0.856097 | 4.05E-62 | -1.69E-46 |
| MS.gene055748 | MS.gene54410 | -0.800459 | 1.43E-48 | -1.69E-46 |
| MS.gene055750 | MS.gene54410 | -0.807633 | 4.60E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene54410 | -0.821782 | 3.36E-53 | -1.69E-46 |
| MS.gene056040 | MS.gene54410 | -0.815791 | 7.72E-52 | -1.69E-46 |
| MS.gene056046 | MS.gene54410 | -0.80946 | 1.87E-50 | -1.69E-46 |
| MS.gene056298 | MS.gene54410 | 0.805219 | 1.48E-49 | -1.69E-46 |
| MS.gene056311 | MS.gene54410 | 0.800068 | 1.71E-48 | -1.69E-46 |
| MS.gene056374 | MS.gene54410 | -0.809144 | 2.19E-50 | -1.69E-46 |
| MS.gene056409 | MS.gene54410 | -0.810408 | 1.17E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene54410 | -0.856509 | 3.07E-62 | -1.69E-46 |
| MS.gene056510 | MS.gene54410 | -0.833442 | 5.32E-56 | -1.69E-46 |
| MS.gene056550 | MS.gene54410 | 0.802526 | 5.38E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene54410 | -0.829302 | 5.55E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene54410 | -0.839966 | 1.15E-57 | -1.69E-46 |
| MS.gene056692 | MS.gene54410 | -0.809898 | 1.51E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene54410 | -0.800375 | 1.48E-48 | -1.69E-46 |
| MS.gene057331 | MS.gene54410 | -0.829524 | 4.91E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene54410 | -0.821951 | 3.07E-53 | -1.69E-46 |
| MS.gene057499 | MS.gene54410 | 0.817452 | 3.27E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene54410 | -0.821626 | 3.65E-53 | -1.69E-46 |
| MS.gene05787 | MS.gene54410 | -0.803572 | 3.27E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene54410 | -0.815632 | 8.37E-52 | -1.69E-46 |
| MS.gene058157 | MS.gene54410 | -0.845905 | 3.03E-59 | -1.69E-46 |
| MS.gene058323 | MS.gene54410 | -0.807969 | 3.90E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene54410 | -0.804528 | 2.07E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene54410 | -0.87151 | 6.47E-67 | -1.69E-46 |
| MS.gene058419 | MS.gene54410 | -0.817675 | 2.92E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene54410 | -0.834992 | 2.17E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene54410 | -0.846456 | 2.15E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene54410 | -0.816876 | 4.41E-52 | -1.69E-46 |
| MS.gene05883 | MS.gene54410 | -0.822372 | 2.45E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene54410 | -0.867459 | 1.35E-65 | -1.69E-46 |
| MS.gene059023 | MS.gene54410 | -0.842262 | 2.88E-58 | -1.69E-46 |
| MS.gene059303 | MS.gene54410 | -0.801142 | 1.04E-48 | -1.69E-46 |
| MS.gene059367 | MS.gene54410 | -0.807207 | 5.66E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene54410 | -0.838238 | 3.24E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene54410 | -0.857583 | 1.48E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene54410 | -0.809268 | 2.06E-50 | -1.69E-46 |
| MS.gene059837 | MS.gene54410 | -0.816381 | 5.69E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene54410 | -0.840473 | 8.51E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene54410 | -0.82453 | 7.68E-54 | -1.69E-46 |
| MS.gene060482 | MS.gene54410 | -0.865309 | 6.48E-65 | -1.69E-46 |
| MS.gene060595 | MS.gene54410 | 0.818049 | 2.40E-52 | -1.69E-46 |
| MS.gene060602 | MS.gene54410 | 0.809916 | 1.49E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene54410 | -0.80894 | 2.42E-50 | -1.69E-46 |
| MS.gene060778 | MS.gene54410 | -0.823577 | 1.28E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene54410 | -0.877318 | 6.92E-69 | -1.69E-46 |
| MS.gene06092 | MS.gene54410 | -0.828292 | 9.75E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene54410 | -0.839279 | 1.74E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene54410 | -0.824569 | 7.52E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54410.t1 | MTR_7g006560 | 98.646 | 443 | 6 | 0 | 1 | 443 | 1 | 443 | 0.0 | 892 |
| MS.gene54410.t1 | MTR_8g096130 | 69.149 | 376 | 115 | 1 | 62 | 436 | 34 | 409 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54410.t1 | AT5G13420 | 79.657 | 408 | 83 | 0 | 35 | 442 | 30 | 437 | 0.0 | 658 |
Find 0 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTATTAAAATTTT+TGG | - | 50635:5580-5599 | MS.gene54410:CDS | 0.0% |
| !! | ACAAATTATTTAAAAATTCA+GGG | + | 50635:8850-8869 | MS.gene54410:intergenic | 10.0% |
| !! | GATTAAAAAACAATTATTTA+AGG | - | 50635:8926-8945 | MS.gene54410:intron | 10.0% |
| !! | TACAAATTATTTAAAAATTC+AGG | + | 50635:8851-8870 | MS.gene54410:intergenic | 10.0% |
| !!! | ATTAAATACTTTTAATTTTC+AGG | - | 50635:5533-5552 | MS.gene54410:CDS | 10.0% |
| !!! | ATTTTTAAATAATTTGTATC+TGG | - | 50635:8853-8872 | MS.gene54410:intron | 10.0% |
| !!! | TTTTTAAATAATTTGTATCT+GGG | - | 50635:8854-8873 | MS.gene54410:intron | 10.0% |
| !! | AAAATGTTTAATTAATCTGA+AGG | + | 50635:9011-9030 | MS.gene54410:intergenic | 15.0% |
| !! | ATATATATATAGTTGCATTA+TGG | - | 50635:5456-5475 | MS.gene54410:intron | 15.0% |
| !! | GATATAATCAACATAATAAT+GGG | - | 50635:7763-7782 | MS.gene54410:intron | 15.0% |
| !! | GTAAAAAAAAATTACACTAT+CGG | - | 50635:5501-5520 | MS.gene54410:CDS | 15.0% |
| !! | TATAAAAAAAATAGAAATCG+AGG | + | 50635:7200-7219 | MS.gene54410:intergenic | 15.0% |
| !! | TCTATATGACATTATTTAAT+TGG | + | 50635:5169-5188 | MS.gene54410:intergenic | 15.0% |
| !! | TGATATAATCAACATAATAA+TGG | - | 50635:7762-7781 | MS.gene54410:intron | 15.0% |
| !!! | AAATTTGAAAGAAAAACTTT+TGG | + | 50635:6835-6854 | MS.gene54410:intergenic | 15.0% |
| !!! | AAGATCTAAAATTATACTTA+AGG | + | 50635:7243-7262 | MS.gene54410:intergenic | 15.0% |
| !!! | ATTTCTATTTTTTTTATAGG+AGG | - | 50635:7202-7221 | MS.gene54410:intron | 15.0% |
| !!! | GACAATTTTTTCAAAATTTA+CGG | - | 50635:8899-8918 | MS.gene54410:intron | 15.0% |
| !!! | TCGATTTCTATTTTTTTTAT+AGG | - | 50635:7199-7218 | MS.gene54410:intron | 15.0% |
| !!! | TTATTATGTTGATTATATCA+AGG | + | 50635:7762-7781 | MS.gene54410:intergenic | 15.0% |
| !!! | TTTCTATTTTTTTTATAGGA+GGG | - | 50635:7203-7222 | MS.gene54410:intron | 15.0% |
| !! | AAAAAAAAAAACCAAGTTCA+GGG | + | 50635:8788-8807 | MS.gene54410:intergenic | 20.0% |
| !! | AAAATAGAACATTAAACTCA+CGG | + | 50635:7288-7307 | MS.gene54410:intergenic | 20.0% |
| !! | AAACTAAATATACTTTGTGA+AGG | + | 50635:6965-6984 | MS.gene54410:intergenic | 20.0% |
| !! | AAGCTTAACATTAAAGTTAA+AGG | + | 50635:5932-5951 | MS.gene54410:intergenic | 20.0% |
| !! | AATGTTTCAAAAATCAATAC+TGG | - | 50635:6626-6645 | MS.gene54410:CDS | 20.0% |
| !! | AGAGATTAATCTCTAAATAA+TGG | - | 50635:5290-5309 | MS.gene54410:intron | 20.0% |
| !! | AGCTTAACATTAAAGTTAAA+GGG | + | 50635:5931-5950 | MS.gene54410:intergenic | 20.0% |
| !! | ATAGATTTATGAACTATTTG+AGG | - | 50635:8688-8707 | MS.gene54410:intron | 20.0% |
| !! | TAAAAAAAAAAACCAAGTTC+AGG | + | 50635:8789-8808 | MS.gene54410:intergenic | 20.0% |
| !! | TAATGTCATATAGATATTTG+TGG | - | 50635:5175-5194 | MS.gene54410:intron | 20.0% |
| !! | TCATATTCATTATAAACTTG+AGG | + | 50635:6246-6265 | MS.gene54410:intergenic | 20.0% |
| !!! | AAAGTATATTTAGTTTAGCT+TGG | - | 50635:6969-6988 | MS.gene54410:intron | 20.0% |
| !!! | AATGTTCTATTTTTAATTCG+TGG | - | 50635:7295-7314 | MS.gene54410:intron | 20.0% |
| !!! | ATTTTTGAAACATTATTCCT+AGG | + | 50635:6620-6639 | MS.gene54410:intergenic | 20.0% |
| !!! | CATGAAATTTGTTTTTTCAT+TGG | - | 50635:5641-5660 | MS.gene54410:intron | 20.0% |
| !!! | TTCTATTTTTTTTATAGGAG+GGG | - | 50635:7204-7223 | MS.gene54410:intron | 20.0% |
| !!! | TTTTGATTTTTATACACTGA+CGG | - | 50635:5051-5070 | MS.gene54410:intron | 20.0% |
| ! | AAAATAAAGTCAAATTGCGT+AGG | - | 50635:5755-5774 | MS.gene54410:intron | 25.0% |
| ! | AAACTGAAGAAAATACTACT+TGG | + | 50635:8658-8677 | MS.gene54410:intergenic | 25.0% |
| ! | AAATAGAACATTAAACTCAC+GGG | + | 50635:7287-7306 | MS.gene54410:intergenic | 25.0% |
| ! | ACAAATGTATATTTAGACTC+CGG | + | 50635:8091-8110 | MS.gene54410:intergenic | 25.0% |
| ! | ACAGTCATTGGATATTTAAT+TGG | + | 50635:5101-5120 | MS.gene54410:intergenic | 25.0% |
| ! | ACTCTCTACAATTATCTATT+TGG | + | 50635:5406-5425 | MS.gene54410:intergenic | 25.0% |
| ! | ATAACATAAATTATTACCGC+TGG | + | 50635:6506-6525 | MS.gene54410:intergenic | 25.0% |
| ! | ATGATCTTTATGAGAAACAA+GGG | - | 50635:6393-6412 | MS.gene54410:intron | 25.0% |
| ! | ATGTTAACATGCTATAAGTT+GGG | - | 50635:7707-7726 | MS.gene54410:CDS | 25.0% |
| ! | ATTCATTATAAACTTGAGGT+TGG | + | 50635:6242-6261 | MS.gene54410:intergenic | 25.0% |
| ! | CAATTATTGTATACAGTCAT+TGG | + | 50635:5113-5132 | MS.gene54410:intergenic | 25.0% |
| ! | CTTCTAAATGAAGATGTATT+TGG | + | 50635:7965-7984 | MS.gene54410:intergenic | 25.0% |
| ! | CTTGATTATGTTAACAAACT+TGG | - | 50635:9053-9072 | MS.gene54410:intron | 25.0% |
| ! | CTTGTTAGGAATTTGTAATT+AGG | + | 50635:8953-8972 | MS.gene54410:intergenic | 25.0% |
| ! | GAATCTTAATATACACATTG+GGG | + | 50635:7559-7578 | MS.gene54410:intergenic | 25.0% |
| ! | GGAATCTTAATATACACATT+GGG | + | 50635:7560-7579 | MS.gene54410:intergenic | 25.0% |
| ! | GGATTATTGAAAAAATGTGA+TGG | + | 50635:8602-8621 | MS.gene54410:intergenic | 25.0% |
| ! | GTAATAATGAAAGACTTGTA+TGG | - | 50635:6552-6571 | MS.gene54410:CDS | 25.0% |
| ! | TAAAATTACATGATCATGCA+GGG | - | 50635:7325-7344 | MS.gene54410:intron | 25.0% |
| ! | TAACATAAATTATTACCGCT+GGG | + | 50635:6505-6524 | MS.gene54410:intergenic | 25.0% |
| ! | TAAGAACTAACATGTAAAAG+TGG | - | 50635:5208-5227 | MS.gene54410:intron | 25.0% |
| ! | TATGTTAACATGCTATAAGT+TGG | - | 50635:7706-7725 | MS.gene54410:CDS | 25.0% |
| ! | TCAAATATACACCAAGTATA+TGG | + | 50635:6121-6140 | MS.gene54410:intergenic | 25.0% |
| ! | TCAATTTATGATCAAACTGA+TGG | - | 50635:7434-7453 | MS.gene54410:intron | 25.0% |
| ! | TGGAATCTTAATATACACAT+TGG | + | 50635:7561-7580 | MS.gene54410:intergenic | 25.0% |
| ! | TGGTATTAGTATATGATTGA+TGG | + | 50635:6815-6834 | MS.gene54410:intergenic | 25.0% |
| ! | TTCAATAATCCATTTGCTTA+TGG | - | 50635:8611-8630 | MS.gene54410:intron | 25.0% |
| ! | TTGTCAGAATAATACTTAGT+GGG | - | 50635:5950-5969 | MS.gene54410:intron | 25.0% |
| !! | AAAATTTCTTTTGGTATAGC+TGG | + | 50635:8443-8462 | MS.gene54410:intergenic | 25.0% |
| !! | ATAATCAACATAATAATGGG+TGG | - | 50635:7766-7785 | MS.gene54410:intron | 25.0% |
| !! | CTATACCAAAAGAAATTTTC+TGG | - | 50635:8444-8463 | MS.gene54410:intron | 25.0% |
| !! | CTATTTGAGGATTTTCAAAA+AGG | - | 50635:8701-8720 | MS.gene54410:intron | 25.0% |
| !! | GAACATTTTTGACAATTTCA+GGG | + | 50635:8757-8776 | MS.gene54410:intergenic | 25.0% |
| !! | GTCATGACATTGAATTTTAT+AGG | - | 50635:8389-8408 | MS.gene54410:intron | 25.0% |
| !! | TGAACATTTTTGACAATTTC+AGG | + | 50635:8758-8777 | MS.gene54410:intergenic | 25.0% |
| !!! | ACAACTTAATTTGTAGCTTA+CGG | - | 50635:5678-5697 | MS.gene54410:intron | 25.0% |
| !!! | TACTTGGTGTATATTTGAAT+TGG | - | 50635:6123-6142 | MS.gene54410:intron | 25.0% |
| !!! | TCACTTTTCCAAATTATTAC+TGG | + | 50635:7882-7901 | MS.gene54410:intergenic | 25.0% |
| !!! | TTACAACTCTTAAAAGTGTT+TGG | + | 50635:6669-6688 | MS.gene54410:intergenic | 25.0% |
| AATAAGAGGAGCAACATATA+AGG | + | 50635:8562-8581 | MS.gene54410:intergenic | 30.0% | |
| ACAAATTCCTAACAAGTTCA+GGG | - | 50635:8957-8976 | MS.gene54410:intron | 30.0% | |
| ACAGTATAACACCATGATTT+CGG | + | 50635:6076-6095 | MS.gene54410:intergenic | 30.0% | |
| ACCTCAAAGAAGTTACAAAA+CGG | + | 50635:4862-4881 | MS.gene54410:intergenic | 30.0% | |
| ATATACACCAAGTATATGGT+TGG | + | 50635:6117-6136 | MS.gene54410:intergenic | 30.0% | |
| ATTAAAGTTAAAGGGCTGTT+TGG | + | 50635:5923-5942 | MS.gene54410:intergenic | 30.0% | |
| ATTTATGATCAAACTGATGG+AGG | - | 50635:7437-7456 | MS.gene54410:intron | 30.0% | |
| CATGATCTTTATGAGAAACA+AGG | - | 50635:6392-6411 | MS.gene54410:intron | 30.0% | |
| CCATAATAACCATAAGCAAA+TGG | + | 50635:8623-8642 | MS.gene54410:intergenic | 30.0% | |
| CCATTTGCTTATGGTTATTA+TGG | - | 50635:8620-8639 | MS.gene54410:intron | 30.0% | |
| CCTAATCGACATTTATATTG+AGG | - | 50635:6281-6300 | MS.gene54410:intron | 30.0% | |
| CGATAACTTCCTTAATTGAA+GGG | + | 50635:7601-7620 | MS.gene54410:intergenic | 30.0% | |
| CTAAAATTACATGATCATGC+AGG | - | 50635:7324-7343 | MS.gene54410:intron | 30.0% | |
| CTTGTCAGAATAATACTTAG+TGG | - | 50635:5949-5968 | MS.gene54410:intron | 30.0% | |
| GATTAATTTCTATCCACTGA+CGG | - | 50635:5339-5358 | MS.gene54410:intron | 30.0% | |
| GCAATAAAGAAAAGAGTAAG+CGG | + | 50635:8316-8335 | MS.gene54410:intergenic | 30.0% | |
| GCATTATGGAATGATTTGAT+TGG | - | 50635:5470-5489 | MS.gene54410:intron | 30.0% | |
| GGAGTCTAAATATACATTTG+TGG | - | 50635:8090-8109 | MS.gene54410:intron | 30.0% | |
| GTAATGTTAGTTCAGGTATT+AGG | + | 50635:9091-9110 | MS.gene54410:intergenic | 30.0% | |
| TACAAATTCCTAACAAGTTC+AGG | - | 50635:8956-8975 | MS.gene54410:intron | 30.0% | |
| TACAGCTTCATATCTTTCAA+GGG | + | 50635:8133-8152 | MS.gene54410:intergenic | 30.0% | |
| TCAAATCCAAACGCAAAAAT+TGG | + | 50635:8338-8357 | MS.gene54410:intergenic | 30.0% | |
| TCACGGGAATATAATACTTA+AGG | + | 50635:7271-7290 | MS.gene54410:intergenic | 30.0% | |
| TCTATTTGGCATCATTTGAT+TGG | + | 50635:5392-5411 | MS.gene54410:intergenic | 30.0% | |
| TCTTTAATGAACATCTCGTT+AGG | - | 50635:9030-9049 | MS.gene54410:intron | 30.0% | |
| TGAAAAAATGTGATGGCTTA+CGG | + | 50635:8595-8614 | MS.gene54410:intergenic | 30.0% | |
| TGTTGACACCAGTAATAATT+TGG | - | 50635:7871-7890 | MS.gene54410:intron | 30.0% | |
| TGTTGTCAAATTGTAGATGT+AGG | + | 50635:7073-7092 | MS.gene54410:intergenic | 30.0% | |
| TTACAGCTTCATATCTTTCA+AGG | + | 50635:8134-8153 | MS.gene54410:intergenic | 30.0% | |
| TTATATGTTGCTCCTCTTAT+TGG | - | 50635:8561-8580 | MS.gene54410:intron | 30.0% | |
| TTGGCTTATTTACTGACATA+AGG | + | 50635:5899-5918 | MS.gene54410:intergenic | 30.0% | |
| TTGGTGTATATTTGAATTGG+TGG | - | 50635:6126-6145 | MS.gene54410:intron | 30.0% | |
| ! | ATTAAATCCCTGAACTTGTT+AGG | + | 50635:8967-8986 | MS.gene54410:intergenic | 30.0% |
| ! | CCTCAATATAAATGTCGATT+AGG | + | 50635:6284-6303 | MS.gene54410:intergenic | 30.0% |
| ! | CGAAGATATTTTTCTATCCT+AGG | - | 50635:6600-6619 | MS.gene54410:CDS | 30.0% |
| ! | TGTTGATTATATCAAGGACA+AGG | + | 50635:7756-7775 | MS.gene54410:intergenic | 30.0% |
| ! | TGTTGCTATTGTCAAAATCA+TGG | - | 50635:6198-6217 | MS.gene54410:intron | 30.0% |
| ! | TTATTGCCAATTTTTGCGTT+TGG | - | 50635:8329-8348 | MS.gene54410:intron | 30.0% |
| !!! | GTTTTTTCATTGGTTCTGTT+TGG | - | 50635:5651-5670 | MS.gene54410:intron | 30.0% |
| !!! | TCTATTTTTAATTCGTGGTG+TGG | - | 50635:7300-7319 | MS.gene54410:intron | 30.0% |
| !!! | TTCATGCTTATTTTTGCATG+CGG | - | 50635:4912-4931 | MS.gene54410:CDS | 30.0% |
| AGCTGTAATTGATGCTTACT+TGG | - | 50635:8146-8165 | MS.gene54410:intron | 35.0% | |
| ATACAATGCTATCCAGAAGT+TGG | - | 50635:9225-9244 | MS.gene54410:CDS | 35.0% | |
| ATATCTTCGCACAAGTAGAA+CGG | + | 50635:6589-6608 | MS.gene54410:intergenic | 35.0% | |
| ATTAAGGAAGTTATCGCCAA+TGG | - | 50635:7605-7624 | MS.gene54410:CDS | 35.0% | |
| ATTAGATGCTCACAAACAGA+TGG | - | 50635:6338-6357 | MS.gene54410:intron | 35.0% | |
| CAATAAAGTAGAGTAAACCG+TGG | - | 50635:6861-6880 | MS.gene54410:intron | 35.0% | |
| CTAACACCACTTTCAATAAG+AGG | + | 50635:6467-6486 | MS.gene54410:intergenic | 35.0% | |
| CTGATTCCTCTTATTGAAAG+TGG | - | 50635:6458-6477 | MS.gene54410:CDS | 35.0% | |
| CTTCAAGCATTTATCGATCA+CGG | - | 50635:9154-9173 | MS.gene54410:intron | 35.0% | |
| GAAAATATTTACACCGTCAG+TGG | + | 50635:5355-5374 | MS.gene54410:intergenic | 35.0% | |
| GACAAGATGCTTGAGAAAAT+TGG | - | 50635:8255-8274 | MS.gene54410:intron | 35.0% | |
| GAGTAATACAACGATTATGC+AGG | + | 50635:6927-6946 | MS.gene54410:intergenic | 35.0% | |
| GCGATAACTTCCTTAATTGA+AGG | + | 50635:7602-7621 | MS.gene54410:intergenic | 35.0% | |
| GTAATTGATGCTTACTTGGA+CGG | - | 50635:8150-8169 | MS.gene54410:intron | 35.0% | |
| GTCGATTAGGAAACAAAACA+AGG | + | 50635:6271-6290 | MS.gene54410:intergenic | 35.0% | |
| GTGATCGATAAATGCTTGAA+GGG | + | 50635:9155-9174 | MS.gene54410:intergenic | 35.0% | |
| GTGCTTACAATGATCAATTC+AGG | - | 50635:6787-6806 | MS.gene54410:intron | 35.0% | |
| GTTATGCTAGTTAGAAGTGA+GGG | - | 50635:7796-7815 | MS.gene54410:intron | 35.0% | |
| TACAATGCTATCCAGAAGTT+GGG | - | 50635:9226-9245 | MS.gene54410:CDS | 35.0% | |
| TAGCTTGGTAAACTACACAA+AGG | - | 50635:6984-7003 | MS.gene54410:intron | 35.0% | |
| TCAGAATAATACTTAGTGGG+TGG | - | 50635:5953-5972 | MS.gene54410:intron | 35.0% | |
| TGAGAAGGTAATGTTAGTTC+AGG | + | 50635:9098-9117 | MS.gene54410:intergenic | 35.0% | |
| TGCAAAATGGCTTCATAAAG+TGG | - | 50635:7526-7545 | MS.gene54410:intron | 35.0% | |
| TGGTGAGTTATGCAAAATCA+CGG | - | 50635:6146-6165 | MS.gene54410:intron | 35.0% | |
| TTCATTTAGATCCCTGAACT+TGG | - | 50635:8774-8793 | MS.gene54410:intron | 35.0% | |
| TTCTTAAAGAAGAAGCAGAG+AGG | + | 50635:4826-4845 | MS.gene54410:intergenic | 35.0% | |
| TTGAATGTAACCTCATGTGT+TGG | - | 50635:7902-7921 | MS.gene54410:intron | 35.0% | |
| ! | AACATATAAGGTGTCAGGAT+AGG | + | 50635:8550-8569 | MS.gene54410:intergenic | 35.0% |
| ! | ACCGTTTTGTAACTTCTTTG+AGG | - | 50635:4858-4877 | MS.gene54410:CDS | 35.0% |
| ! | ATTTGGTGAATGACATGTGT+CGG | + | 50635:7948-7967 | MS.gene54410:intergenic | 35.0% |
| ! | CTTATTGAAAGTGGTGTTAG+AGG | - | 50635:6467-6486 | MS.gene54410:CDS | 35.0% |
| ! | GGAAGCTCTAGTTAAAAAAG+GGG | - | 50635:8476-8495 | MS.gene54410:intron | 35.0% |
| ! | GGGAAGCTCTAGTTAAAAAA+GGG | - | 50635:8475-8494 | MS.gene54410:intron | 35.0% |
| ! | GTTGTAAGGATGTGTTTTGT+TGG | - | 50635:5028-5047 | MS.gene54410:intron | 35.0% |
| ! | TGGGAAGCTCTAGTTAAAAA+AGG | - | 50635:8474-8493 | MS.gene54410:intron | 35.0% |
| ! | TTGGGCCAGAAAATTTCTTT+TGG | + | 50635:8452-8471 | MS.gene54410:intergenic | 35.0% |
| ! | TTTCTGTTGAAGTATCTCCT+AGG | - | 50635:7471-7490 | MS.gene54410:intron | 35.0% |
| !! | AAAAGAAATTTTCTGGCCCA+AGG | - | 50635:8451-8470 | MS.gene54410:intron | 35.0% |
| !! | GATTACTTTTACCATGTTGC+CGG | - | 50635:8069-8088 | MS.gene54410:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTAAGT+TGG | - | 50635:5783-5802 | MS.gene54410:CDS | 35.0% |
| !!! | CGATGTGTTTTGTTGTTGTA+AGG | - | 50635:5014-5033 | MS.gene54410:intron | 35.0% |
| AAGACATTGACAGTGCATAC+TGG | - | 50635:7366-7385 | MS.gene54410:intron | 40.0% | |
| AAGAGGAATCAGATCCGTAA+CGG | + | 50635:6450-6469 | MS.gene54410:intergenic | 40.0% | |
| AAGGTCAATGTTGTCAATCC+CGG | - | 50635:7003-7022 | MS.gene54410:intron | 40.0% | |
| AATCGCAATTCTCTGTGATC+CGG | + | 50635:7025-7044 | MS.gene54410:intergenic | 40.0% | |
| ACGGTGTTTGACAAAGTTAC+AGG | - | 50635:6005-6024 | MS.gene54410:intron | 40.0% | |
| AGACATTGACAGTGCATACT+GGG | - | 50635:7367-7386 | MS.gene54410:intron | 40.0% | |
| AGTTAAAGGGCTGTTTGGAT+TGG | + | 50635:5918-5937 | MS.gene54410:intergenic | 40.0% | |
| ATACTGGGAACTTGTAGTGA+AGG | - | 50635:7382-7401 | MS.gene54410:intron | 40.0% | |
| ATATTTAGACTCCGGCAACA+TGG | + | 50635:8083-8102 | MS.gene54410:intergenic | 40.0% | |
| CACCAAGTATATGGTTGGAT+TGG | + | 50635:6112-6131 | MS.gene54410:intergenic | 40.0% | |
| CACCAATCCAACCATATACT+TGG | - | 50635:6107-6126 | MS.gene54410:intron | 40.0% | |
| CACGTTCACACTTATTCCAT+TGG | + | 50635:7624-7643 | MS.gene54410:intergenic | 40.0% | |
| CGGTGTTTGACAAAGTTACA+GGG | - | 50635:6006-6025 | MS.gene54410:intron | 40.0% | |
| CGTGATCGATAAATGCTTGA+AGG | + | 50635:9156-9175 | MS.gene54410:intergenic | 40.0% | |
| CTGAAAGATCTGCAATCATG+TGG | + | 50635:6748-6767 | MS.gene54410:intergenic | 40.0% | |
| CTGCAATCATGTGGTATAGA+CGG | + | 50635:6739-6758 | MS.gene54410:intergenic | 40.0% | |
| GAACCATAGAAGCTGCAAAA+TGG | - | 50635:7513-7532 | MS.gene54410:intron | 40.0% | |
| GAAGGCAAAATCTCTTAAGC+TGG | - | 50635:9342-9361 | MS.gene54410:CDS | 40.0% | |
| GCAAACATTTGACTGTTGGT+TGG | - | 50635:6303-6322 | MS.gene54410:intron | 40.0% | |
| GCATAGAGAGTTTGGAGAAA+CGG | + | 50635:7129-7148 | MS.gene54410:intergenic | 40.0% | |
| GCTATTACAAACCGACTGTA+AGG | + | 50635:5985-6004 | MS.gene54410:intergenic | 40.0% | |
| GGTGTTTGACAAAGTTACAG+GGG | - | 50635:6007-6026 | MS.gene54410:intron | 40.0% | |
| GGTTATGCTAGTTAGAAGTG+AGG | - | 50635:7795-7814 | MS.gene54410:intron | 40.0% | |
| GTCAATATCAGTGATGTGTC+TGG | + | 50635:7850-7869 | MS.gene54410:intergenic | 40.0% | |
| GTGTACTAAATCGTGTATCG+CGG | - | 50635:7095-7114 | MS.gene54410:intron | 40.0% | |
| TAAAGTAGAGTAAACCGTGG+AGG | - | 50635:6864-6883 | MS.gene54410:intron | 40.0% | |
| TACCTGGGAAGTAAATGAGA+AGG | + | 50635:9113-9132 | MS.gene54410:intergenic | 40.0% | |
| TACCTTCTCATTTACTTCCC+AGG | - | 50635:9108-9127 | MS.gene54410:intron | 40.0% | |
| TATCTGGGTCCTTAAAGTCA+GGG | - | 50635:8869-8888 | MS.gene54410:intron | 40.0% | |
| TCATCAAGTCCCTGACTTTA+AGG | + | 50635:8881-8900 | MS.gene54410:intergenic | 40.0% | |
| TCCAATCAATACCCAACTTC+TGG | + | 50635:9240-9259 | MS.gene54410:intergenic | 40.0% | |
| TCTCCAAACTCTCTATGCTA+TGG | - | 50635:7131-7150 | MS.gene54410:intron | 40.0% | |
| TGAGGCAAACATTTGACTGT+TGG | - | 50635:6299-6318 | MS.gene54410:intron | 40.0% | |
| TGAGTTATGCAAAATCACGG+TGG | - | 50635:6149-6168 | MS.gene54410:intron | 40.0% | |
| TGCATGTGTCCCTTCAATTA+AGG | - | 50635:7589-7608 | MS.gene54410:CDS | 40.0% | |
| TGCATTTGAGTCTATTGTCC+TGG | + | 50635:9188-9207 | MS.gene54410:intergenic | 40.0% | |
| TGCTCACAAACAGATGGAAA+TGG | - | 50635:6344-6363 | MS.gene54410:intron | 40.0% | |
| TTTCGGCAAAAGCTGCAATT+TGG | + | 50635:6059-6078 | MS.gene54410:intergenic | 40.0% | |
| ! | AGCTAAGAAGCTCGTTTTGA+TGG | + | 50635:4774-4793 | MS.gene54410:intergenic | 40.0% |
| ! | CAAGTATATGGTTGGATTGG+TGG | + | 50635:6109-6128 | MS.gene54410:intergenic | 40.0% |
| ! | TCAAATGCATCTGAAGCTGA+AGG | - | 50635:9199-9218 | MS.gene54410:CDS | 40.0% |
| !! | AAGCCATTTTGCAGCTTCTA+TGG | + | 50635:7519-7538 | MS.gene54410:intergenic | 40.0% |
| !! | ACAGTCGGTTTGTAATAGCA+CGG | - | 50635:5986-6005 | MS.gene54410:intron | 40.0% |
| !! | CATAATAATGGGTGGTAGCA+AGG | - | 50635:7774-7793 | MS.gene54410:intron | 40.0% |
| !! | GGTATTGATTGGAGCTATGT+TGG | - | 50635:9247-9266 | MS.gene54410:CDS | 40.0% |
| !! | TCCAGAAGTTGGGTATTGAT+TGG | - | 50635:9236-9255 | MS.gene54410:CDS | 40.0% |
| !! | TGTTGGTTCACAGCTTGAAT+TGG | - | 50635:9264-9283 | MS.gene54410:CDS | 40.0% |
| AAAAAGGGGCCAAGAAGCAA+AGG | - | 50635:8490-8509 | MS.gene54410:intron | 45.0% | |
| AATGTGATGGCTTACGGTGT+CGG | + | 50635:8589-8608 | MS.gene54410:intergenic | 45.0% | |
| ACTTGAGGTTGGCAGAATCA+TGG | + | 50635:6231-6250 | MS.gene54410:intergenic | 45.0% | |
| AGAGGAATCAGATCCGTAAC+GGG | + | 50635:6449-6468 | MS.gene54410:intergenic | 45.0% | |
| ATAGGCAGGATTCTTAACGC+TGG | + | 50635:8532-8551 | MS.gene54410:intergenic | 45.0% | |
| ATCGCAATTCTCTGTGATCC+GGG | + | 50635:7024-7043 | MS.gene54410:intergenic | 45.0% | |
| CGATAAATGCTTGAAGGGCT+TGG | + | 50635:9150-9169 | MS.gene54410:intergenic | 45.0% | |
| CGGCAGAGATTATCATACCA+TGG | + | 50635:6425-6444 | MS.gene54410:intergenic | 45.0% | |
| GAAATGGAGTTCCTGCAAAG+AGG | - | 50635:6360-6379 | MS.gene54410:intron | 45.0% | |
| GAGATTCTGGTAAAGAAGCG+CGG | + | 50635:4739-4758 | MS.gene54410:intergenic | 45.0% | |
| GATCAAACTGATGGAGGTGA+TGG | - | 50635:7443-7462 | MS.gene54410:intron | 45.0% | |
| GATCTGGATCGAAGAGATTC+TGG | + | 50635:4752-4771 | MS.gene54410:intergenic | 45.0% | |
| GGTGGTATTTGCCTTACAGT+CGG | - | 50635:5971-5990 | MS.gene54410:intron | 45.0% | |
| GGTTCACAGCTTGAATTGGA+AGG | - | 50635:9268-9287 | MS.gene54410:CDS | 45.0% | |
| GTATCTGGGTCCTTAAAGTC+AGG | - | 50635:8868-8887 | MS.gene54410:intron | 45.0% | |
| TAACTAGAGCTTCCCACCTT+GGG | + | 50635:8470-8489 | MS.gene54410:intergenic | 45.0% | |
| TACCTTGCCACGTAGATCAA+GGG | + | 50635:8292-8311 | MS.gene54410:intergenic | 45.0% | |
| TGTGAGCATCTAATCCTGCA+AGG | + | 50635:6332-6351 | MS.gene54410:intergenic | 45.0% | |
| TTAACTAGAGCTTCCCACCT+TGG | + | 50635:8471-8490 | MS.gene54410:intergenic | 45.0% | |
| TTACCTTGCCACGTAGATCA+AGG | + | 50635:8293-8312 | MS.gene54410:intergenic | 45.0% | |
| TTTGTAGCTTACGGCGTAAG+TGG | - | 50635:5687-5706 | MS.gene54410:intron | 45.0% | |
| ! | AAAGAAGCGCGGTTTGTGTT+TGG | + | 50635:4728-4747 | MS.gene54410:intergenic | 45.0% |
| ! | CAACACTTGTGACTCTAGAG+AGG | + | 50635:8200-8219 | MS.gene54410:intergenic | 45.0% |
| ! | GGAGCAACATATAAGGTGTC+AGG | + | 50635:8555-8574 | MS.gene54410:intergenic | 45.0% |
| ! | TATAAGGTGTCAGGATAGGC+AGG | + | 50635:8546-8565 | MS.gene54410:intergenic | 45.0% |
| ! | TGCAGCTTTTGCCGAAATCA+TGG | - | 50635:6062-6081 | MS.gene54410:intron | 45.0% |
| !! | AGAAATTTTCTGGCCCAAGG+TGG | - | 50635:8454-8473 | MS.gene54410:intron | 45.0% |
| !! | GAAATTTTCTGGCCCAAGGT+GGG | - | 50635:8455-8474 | MS.gene54410:intron | 45.0% |
| !! | GAAGCTCGTTTTGATGGATC+TGG | + | 50635:4768-4787 | MS.gene54410:intergenic | 45.0% |
| !! | ATTAAAAAACAATTATTTAA+GGG | - | 50635:8927-8946 | MS.gene54410:intron | 5.0% |
| !!! | TTAAATAATTGTTTTTTAAT+CGG | + | 50635:8927-8946 | MS.gene54410:intergenic | 5.0% |
| ACGTAGATCAAGGGCTTCTG+GGG | + | 50635:8283-8302 | MS.gene54410:intergenic | 50.0% | |
| AGAAACAAGGGCAGAGTCCA+TGG | - | 50635:6405-6424 | MS.gene54410:intron | 50.0% | |
| ATGTGATGGCTTACGGTGTC+GGG | + | 50635:8588-8607 | MS.gene54410:intergenic | 50.0% | |
| CAAGAAGCAAAGGCTCCTGT+GGG | - | 50635:8500-8519 | MS.gene54410:intron | 50.0% | |
| CACGTAGATCAAGGGCTTCT+GGG | + | 50635:8284-8303 | MS.gene54410:intergenic | 50.0% | |
| CACTCGACTGACAAAGAACG+AGG | + | 50635:8223-8242 | MS.gene54410:intergenic | 50.0% | |
| CTCGTTCTTTGTCAGTCGAG+TGG | - | 50635:8221-8240 | MS.gene54410:intron | 50.0% | |
| GAGACATGTCTATGCCTCCA+CGG | + | 50635:6881-6900 | MS.gene54410:intergenic | 50.0% | |
| GCGCCATAGCATAGAGAGTT+TGG | + | 50635:7137-7156 | MS.gene54410:intergenic | 50.0% | |
| GTCTGGCATGGTAGATACCT+GGG | + | 50635:9128-9147 | MS.gene54410:intergenic | 50.0% | |
| TAATCTCTGCCGACCCGTTA+CGG | - | 50635:6433-6452 | MS.gene54410:CDS | 50.0% | |
| TCAGTATCCTCAGCAAGCCT+AGG | + | 50635:7491-7510 | MS.gene54410:intergenic | 50.0% | |
| TGAAGAACCGTCCTCTTTGC+AGG | + | 50635:6374-6393 | MS.gene54410:intergenic | 50.0% | |
| TGAATCCAGGAGGCTGTCAA+AGG | + | 50635:9314-9333 | MS.gene54410:intergenic | 50.0% | |
| TGATGCTTACTTGGACGGTC+TGG | - | 50635:8155-8174 | MS.gene54410:intron | 50.0% | |
| TGGAGTTCCTGCAAAGAGGA+CGG | - | 50635:6364-6383 | MS.gene54410:intron | 50.0% | |
| TGGCGCGATAGAGATGCTAT+TGG | - | 50635:7151-7170 | MS.gene54410:intron | 50.0% | |
| ! | AATGCTTGAAGGGCTTGGTC+TGG | + | 50635:9145-9164 | MS.gene54410:intergenic | 50.0% |
| !! | AGGCTTGCTGAGGATACTGA+AGG | - | 50635:7491-7510 | MS.gene54410:intron | 50.0% |
| !! | AGTATCTCCTAGGCTTGCTG+AGG | - | 50635:7481-7500 | MS.gene54410:intron | 50.0% |
| !! | GAATCAGATCCGTAACGGGT+CGG | + | 50635:6445-6464 | MS.gene54410:intergenic | 50.0% |
| AGCCCTTGATCTACGTGGCA+AGG | - | 50635:8287-8306 | MS.gene54410:intron | 55.0% | |
| CCAAGAAGCAAAGGCTCCTG+TGG | - | 50635:8499-8518 | MS.gene54410:intron | 55.0% | |
| CCACAGGAGCCTTTGCTTCT+TGG | + | 50635:8502-8521 | MS.gene54410:intergenic | 55.0% | |
| CCACGTAGATCAAGGGCTTC+TGG | + | 50635:8285-8304 | MS.gene54410:intergenic | 55.0% | |
| CCAGAAGCCCTTGATCTACG+TGG | - | 50635:8282-8301 | MS.gene54410:intron | 55.0% | |
| CCTGGATTCACTGCAGGAGA+AGG | - | 50635:9324-9343 | MS.gene54410:CDS | 55.0% | |
| CCTTCTCCTGCAGTGAATCC+AGG | + | 50635:9327-9346 | MS.gene54410:intergenic | 55.0% | |
| CGAAGCGACACCAACACATG+AGG | + | 50635:7915-7934 | MS.gene54410:intergenic | 55.0% | |
| GAAAGCCTTTGACAGCCTCC+TGG | - | 50635:9306-9325 | MS.gene54410:CDS | 55.0% | |
| GCAGGGAACTTGTGCAAGCA+GGG | - | 50635:7342-7361 | MS.gene54410:intron | 55.0% | |
| GGTCTGGCATGGTAGATACC+TGG | + | 50635:9129-9148 | MS.gene54410:intergenic | 55.0% | |
| TCTCCTGCAGTGAATCCAGG+AGG | + | 50635:9324-9343 | MS.gene54410:intergenic | 55.0% | |
| TGCAGGGAACTTGTGCAAGC+AGG | - | 50635:7341-7360 | MS.gene54410:intron | 55.0% | |
| TGCTTACTTGGACGGTCTGG+AGG | - | 50635:8158-8177 | MS.gene54410:intron | 55.0% | |
| ! | ACGGTGTCGGGTCCAATAAG+AGG | + | 50635:8576-8595 | MS.gene54410:intergenic | 55.0% |
| ! | CTGTTGGTTGGTGTCCTTGC+AGG | - | 50635:6315-6334 | MS.gene54410:intron | 55.0% |
| ! | TAACGCTGGTTGAAGCCCAC+AGG | + | 50635:8518-8537 | MS.gene54410:intergenic | 55.0% |
| ! | TTGAAGGGCTTGGTCTGGCA+TGG | + | 50635:9140-9159 | MS.gene54410:intergenic | 55.0% |
| !! | CTGGTAAGCCAGTGCTGCTT+GGG | + | 50635:8424-8443 | MS.gene54410:intergenic | 55.0% |
| AGCAGTAGCCCAAGCAGCAC+TGG | - | 50635:8413-8432 | MS.gene54410:intron | 60.0% | |
| AGGCGTCACTAGCAACCCAG+CGG | - | 50635:6487-6506 | MS.gene54410:CDS | 60.0% | |
| CAGCCTCCTGGATTCACTGC+AGG | - | 50635:9318-9337 | MS.gene54410:CDS | 60.0% | |
| GGGACACATGCAGCTGTAGC+TGG | + | 50635:7581-7600 | MS.gene54410:intergenic | 60.0% | |
| ! | GCTGGTAAGCCAGTGCTGCT+TGG | + | 50635:8425-8444 | MS.gene54410:intergenic | 60.0% |
| !! | TCGATCACGGTGCTGTAGCC+AGG | - | 50635:9167-9186 | MS.gene54410:intron | 60.0% |
| !! | TGGACGGTCTGGAGGCATCT+GGG | - | 50635:8166-8185 | MS.gene54410:intron | 60.0% |
| !! | TTGGACGGTCTGGAGGCATC+TGG | - | 50635:8165-8184 | MS.gene54410:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50635 | gene | 4689 | 9375 | 4689 | ID=MS.gene54410 |
| 50635 | mRNA | 4689 | 9375 | 4689 | ID=MS.gene54410.t1;Parent=MS.gene54410 |
| 50635 | exon | 9185 | 9375 | 9185 | ID=MS.gene54410.t1.exon1;Parent=MS.gene54410.t1 |
| 50635 | CDS | 9185 | 9375 | 9185 | ID=cds.MS.gene54410.t1;Parent=MS.gene54410.t1 |
| 50635 | exon | 7556 | 7727 | 7556 | ID=MS.gene54410.t1.exon2;Parent=MS.gene54410.t1 |
| 50635 | CDS | 7556 | 7727 | 7556 | ID=cds.MS.gene54410.t1;Parent=MS.gene54410.t1 |
| 50635 | exon | 7256 | 7305 | 7256 | ID=MS.gene54410.t1.exon3;Parent=MS.gene54410.t1 |
| 50635 | CDS | 7256 | 7305 | 7256 | ID=cds.MS.gene54410.t1;Parent=MS.gene54410.t1 |
| 50635 | exon | 6418 | 6718 | 6418 | ID=MS.gene54410.t1.exon4;Parent=MS.gene54410.t1 |
| 50635 | CDS | 6418 | 6718 | 6418 | ID=cds.MS.gene54410.t1;Parent=MS.gene54410.t1 |
| 50635 | exon | 5756 | 5944 | 5756 | ID=MS.gene54410.t1.exon5;Parent=MS.gene54410.t1 |
| 50635 | CDS | 5756 | 5944 | 5756 | ID=cds.MS.gene54410.t1;Parent=MS.gene54410.t1 |
| 50635 | exon | 5471 | 5653 | 5471 | ID=MS.gene54410.t1.exon6;Parent=MS.gene54410.t1 |
| 50635 | CDS | 5471 | 5653 | 5471 | ID=cds.MS.gene54410.t1;Parent=MS.gene54410.t1 |
| 50635 | exon | 4689 | 4934 | 4689 | ID=MS.gene54410.t1.exon7;Parent=MS.gene54410.t1 |
| 50635 | CDS | 4689 | 4934 | 4689 | ID=cds.MS.gene54410.t1;Parent=MS.gene54410.t1 |
| Gene Sequence |
| Protein sequence |
