Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38095.t1 | CAA57782.1 | 99.4 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 2.20E-175 | 624.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38095.t1 | P26690 | 84.2 | 310 | 49 | 0 | 3 | 312 | 4 | 313 | 5.9e-153 | 541.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38095.t1 | Q40333 | 99.4 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 1.6e-175 | 624.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene38095 | -0.800698 | 1.28E-48 | -1.69E-46 |
MS.gene049217 | MS.gene38095 | -0.814439 | 1.54E-51 | -1.69E-46 |
MS.gene049222 | MS.gene38095 | -0.822289 | 2.56E-53 | -1.69E-46 |
MS.gene049232 | MS.gene38095 | -0.849838 | 2.50E-60 | -1.69E-46 |
MS.gene049259 | MS.gene38095 | 0.818148 | 2.28E-52 | -1.69E-46 |
MS.gene049285 | MS.gene38095 | -0.81752 | 3.16E-52 | -1.69E-46 |
MS.gene049320 | MS.gene38095 | -0.83799 | 3.75E-57 | -1.69E-46 |
MS.gene049483 | MS.gene38095 | 0.826198 | 3.10E-54 | -1.69E-46 |
MS.gene049611 | MS.gene38095 | 0.836627 | 8.38E-57 | -1.69E-46 |
MS.gene049634 | MS.gene38095 | 0.827891 | 1.22E-54 | -1.69E-46 |
MS.gene05010 | MS.gene38095 | -0.835996 | 1.21E-56 | -1.69E-46 |
MS.gene050163 | MS.gene38095 | -0.802836 | 4.64E-49 | -1.69E-46 |
MS.gene050165 | MS.gene38095 | -0.800805 | 1.21E-48 | -1.69E-46 |
MS.gene050173 | MS.gene38095 | 0.801995 | 6.92E-49 | -1.69E-46 |
MS.gene050216 | MS.gene38095 | -0.858538 | 7.69E-63 | -1.69E-46 |
MS.gene050323 | MS.gene38095 | -0.812086 | 5.06E-51 | -1.69E-46 |
MS.gene050333 | MS.gene38095 | -0.813898 | 2.03E-51 | -1.69E-46 |
MS.gene050363 | MS.gene38095 | 0.834154 | 3.53E-56 | -1.69E-46 |
MS.gene050380 | MS.gene38095 | 0.841363 | 4.97E-58 | -1.69E-46 |
MS.gene050381 | MS.gene38095 | 0.911166 | 8.26E-83 | -1.69E-46 |
MS.gene050496 | MS.gene38095 | -0.824522 | 7.71E-54 | -1.69E-46 |
MS.gene050504 | MS.gene38095 | -0.86453 | 1.14E-64 | -1.69E-46 |
MS.gene050518 | MS.gene38095 | -0.822422 | 2.39E-53 | -1.69E-46 |
MS.gene050612 | MS.gene38095 | -0.844198 | 8.77E-59 | -1.69E-46 |
MS.gene050662 | MS.gene38095 | -0.802823 | 4.67E-49 | -1.69E-46 |
MS.gene050675 | MS.gene38095 | -0.826897 | 2.11E-54 | -1.69E-46 |
MS.gene05079 | MS.gene38095 | 0.800662 | 1.30E-48 | -1.69E-46 |
MS.gene050868 | MS.gene38095 | -0.85495 | 8.75E-62 | -1.69E-46 |
MS.gene050871 | MS.gene38095 | -0.857493 | 1.57E-62 | -1.69E-46 |
MS.gene050883 | MS.gene38095 | 0.895606 | 8.17E-76 | -1.69E-46 |
MS.gene050986 | MS.gene38095 | -0.83526 | 1.86E-56 | -1.69E-46 |
MS.gene051044 | MS.gene38095 | 0.811924 | 5.49E-51 | -1.69E-46 |
MS.gene05104 | MS.gene38095 | 0.807317 | 5.36E-50 | -1.69E-46 |
MS.gene051127 | MS.gene38095 | 0.88147 | 2.34E-70 | -1.69E-46 |
MS.gene051138 | MS.gene38095 | 0.817204 | 3.72E-52 | -1.69E-46 |
MS.gene051268 | MS.gene38095 | -0.827434 | 1.57E-54 | -1.69E-46 |
MS.gene051364 | MS.gene38095 | 0.816016 | 6.87E-52 | -1.69E-46 |
MS.gene051366 | MS.gene38095 | 0.808555 | 2.92E-50 | -1.69E-46 |
MS.gene05141 | MS.gene38095 | 0.831896 | 1.29E-55 | -1.69E-46 |
MS.gene051509 | MS.gene38095 | -0.827601 | 1.43E-54 | -1.69E-46 |
MS.gene051551 | MS.gene38095 | -0.816064 | 6.70E-52 | -1.69E-46 |
MS.gene051564 | MS.gene38095 | -0.818286 | 2.12E-52 | -1.69E-46 |
MS.gene051946 | MS.gene38095 | 0.843023 | 1.81E-58 | -1.69E-46 |
MS.gene052164 | MS.gene38095 | -0.837494 | 5.03E-57 | -1.69E-46 |
MS.gene052482 | MS.gene38095 | -0.830907 | 2.25E-55 | -1.69E-46 |
MS.gene052486 | MS.gene38095 | -0.82977 | 4.27E-55 | -1.69E-46 |
MS.gene052566 | MS.gene38095 | 0.806811 | 6.86E-50 | -1.69E-46 |
MS.gene052802 | MS.gene38095 | 0.811895 | 5.57E-51 | -1.69E-46 |
MS.gene052916 | MS.gene38095 | -0.805044 | 1.61E-49 | -1.69E-46 |
MS.gene052966 | MS.gene38095 | -0.829867 | 4.05E-55 | -1.69E-46 |
MS.gene053018 | MS.gene38095 | -0.81765 | 2.95E-52 | -1.69E-46 |
MS.gene053069 | MS.gene38095 | 0.832383 | 9.76E-56 | -1.69E-46 |
MS.gene053203 | MS.gene38095 | -0.81568 | 8.16E-52 | -1.69E-46 |
MS.gene053213 | MS.gene38095 | -0.801782 | 7.65E-49 | -1.69E-46 |
MS.gene053286 | MS.gene38095 | -0.802157 | 6.41E-49 | -1.69E-46 |
MS.gene053420 | MS.gene38095 | 0.882239 | 1.23E-70 | -1.69E-46 |
MS.gene053436 | MS.gene38095 | -0.807914 | 4.00E-50 | -1.69E-46 |
MS.gene053488 | MS.gene38095 | 0.805428 | 1.34E-49 | -1.69E-46 |
MS.gene053549 | MS.gene38095 | 0.831577 | 1.54E-55 | -1.69E-46 |
MS.gene053561 | MS.gene38095 | 0.85527 | 7.06E-62 | -1.69E-46 |
MS.gene053574 | MS.gene38095 | -0.815679 | 8.17E-52 | -1.69E-46 |
MS.gene053626 | MS.gene38095 | -0.820395 | 7.02E-53 | -1.69E-46 |
MS.gene053826 | MS.gene38095 | 0.813219 | 2.86E-51 | -1.69E-46 |
MS.gene054054 | MS.gene38095 | 0.809963 | 1.46E-50 | -1.69E-46 |
MS.gene054056 | MS.gene38095 | 0.817886 | 2.61E-52 | -1.69E-46 |
MS.gene054595 | MS.gene38095 | -0.845152 | 4.85E-59 | -1.69E-46 |
MS.gene054616 | MS.gene38095 | 0.840856 | 6.76E-58 | -1.69E-46 |
MS.gene054706 | MS.gene38095 | 0.80609 | 9.74E-50 | -1.69E-46 |
MS.gene054708 | MS.gene38095 | 0.849669 | 2.79E-60 | -1.69E-46 |
MS.gene054954 | MS.gene38095 | -0.827762 | 1.31E-54 | -1.69E-46 |
MS.gene055124 | MS.gene38095 | 0.868313 | 7.17E-66 | -1.69E-46 |
MS.gene055154 | MS.gene38095 | 0.872147 | 3.97E-67 | -1.69E-46 |
MS.gene055202 | MS.gene38095 | 0.831445 | 1.66E-55 | -1.69E-46 |
MS.gene055362 | MS.gene38095 | -0.832189 | 1.09E-55 | -1.69E-46 |
MS.gene055502 | MS.gene38095 | -0.835102 | 2.04E-56 | -1.69E-46 |
MS.gene055577 | MS.gene38095 | -0.825972 | 3.50E-54 | -1.69E-46 |
MS.gene055748 | MS.gene38095 | -0.805009 | 1.64E-49 | -1.69E-46 |
MS.gene055750 | MS.gene38095 | -0.845975 | 2.90E-59 | -1.69E-46 |
MS.gene055751 | MS.gene38095 | -0.817711 | 2.86E-52 | -1.69E-46 |
MS.gene05589 | MS.gene38095 | -0.820082 | 8.27E-53 | -1.69E-46 |
MS.gene055959 | MS.gene38095 | 0.801507 | 8.72E-49 | -1.69E-46 |
MS.gene056224 | MS.gene38095 | 0.800763 | 1.24E-48 | -1.69E-46 |
MS.gene056298 | MS.gene38095 | 0.803883 | 2.82E-49 | -1.69E-46 |
MS.gene056310 | MS.gene38095 | 0.908695 | 1.29E-81 | -1.69E-46 |
MS.gene056311 | MS.gene38095 | 0.91121 | 7.87E-83 | -1.69E-46 |
MS.gene056313 | MS.gene38095 | 0.896332 | 4.08E-76 | -1.69E-46 |
MS.gene056408 | MS.gene38095 | 0.814842 | 1.25E-51 | -1.69E-46 |
MS.gene056504 | MS.gene38095 | -0.855889 | 4.66E-62 | -1.69E-46 |
MS.gene056510 | MS.gene38095 | -0.824435 | 8.08E-54 | -1.69E-46 |
MS.gene056530 | MS.gene38095 | 0.800505 | 1.40E-48 | -1.69E-46 |
MS.gene056657 | MS.gene38095 | -0.820098 | 8.21E-53 | -1.69E-46 |
MS.gene056878 | MS.gene38095 | -0.811408 | 7.11E-51 | -1.69E-46 |
MS.gene057014 | MS.gene38095 | 0.855326 | 6.80E-62 | -1.69E-46 |
MS.gene058041 | MS.gene38095 | -0.800066 | 1.72E-48 | -1.69E-46 |
MS.gene058093 | MS.gene38095 | 0.813828 | 2.10E-51 | -1.69E-46 |
MS.gene058099 | MS.gene38095 | 0.84958 | 2.95E-60 | -1.69E-46 |
MS.gene058108 | MS.gene38095 | 0.848134 | 7.44E-60 | -1.69E-46 |
MS.gene058109 | MS.gene38095 | 0.880327 | 6.01E-70 | -1.69E-46 |
MS.gene058111 | MS.gene38095 | 0.84313 | 1.69E-58 | -1.69E-46 |
MS.gene058117 | MS.gene38095 | 0.809279 | 2.05E-50 | -1.69E-46 |
MS.gene058157 | MS.gene38095 | -0.821986 | 3.02E-53 | -1.69E-46 |
MS.gene058170 | MS.gene38095 | 0.817167 | 3.79E-52 | -1.69E-46 |
MS.gene058171 | MS.gene38095 | 0.894073 | 3.47E-75 | -1.69E-46 |
MS.gene058173 | MS.gene38095 | 0.888004 | 8.67E-73 | -1.69E-46 |
MS.gene058174 | MS.gene38095 | 0.822628 | 2.14E-53 | -1.69E-46 |
MS.gene058175 | MS.gene38095 | 0.895044 | 1.39E-75 | -1.69E-46 |
MS.gene058179 | MS.gene38095 | 0.812779 | 3.57E-51 | -1.69E-46 |
MS.gene058180 | MS.gene38095 | 0.818187 | 2.23E-52 | -1.69E-46 |
MS.gene058268 | MS.gene38095 | 0.819308 | 1.24E-52 | -1.69E-46 |
MS.gene058269 | MS.gene38095 | 0.81542 | 9.33E-52 | -1.69E-46 |
MS.gene05837 | MS.gene38095 | -0.824749 | 6.82E-54 | -1.69E-46 |
MS.gene058419 | MS.gene38095 | -0.803233 | 3.84E-49 | -1.69E-46 |
MS.gene058493 | MS.gene38095 | 0.839844 | 1.24E-57 | -1.69E-46 |
MS.gene058494 | MS.gene38095 | 0.842238 | 2.92E-58 | -1.69E-46 |
MS.gene058628 | MS.gene38095 | 0.8085 | 3.00E-50 | -1.69E-46 |
MS.gene058629 | MS.gene38095 | 0.802461 | 5.55E-49 | -1.69E-46 |
MS.gene058630 | MS.gene38095 | 0.80792 | 3.99E-50 | -1.69E-46 |
MS.gene058773 | MS.gene38095 | -0.822007 | 2.98E-53 | -1.69E-46 |
MS.gene058840 | MS.gene38095 | 0.81864 | 1.76E-52 | -1.69E-46 |
MS.gene05884 | MS.gene38095 | 0.829291 | 5.59E-55 | -1.69E-46 |
MS.gene058978 | MS.gene38095 | 0.806082 | 9.78E-50 | -1.69E-46 |
MS.gene059022 | MS.gene38095 | -0.857865 | 1.22E-62 | -1.69E-46 |
MS.gene059034 | MS.gene38095 | -0.802951 | 4.40E-49 | -1.69E-46 |
MS.gene059037 | MS.gene38095 | 0.85783 | 1.25E-62 | -1.69E-46 |
MS.gene059038 | MS.gene38095 | 0.826781 | 2.25E-54 | -1.69E-46 |
MS.gene059045 | MS.gene38095 | 0.874612 | 5.89E-68 | -1.69E-46 |
MS.gene059052 | MS.gene38095 | 0.834307 | 3.23E-56 | -1.69E-46 |
MS.gene059223 | MS.gene38095 | 0.838868 | 2.23E-57 | -1.69E-46 |
MS.gene059367 | MS.gene38095 | -0.859774 | 3.28E-63 | -1.69E-46 |
MS.gene059368 | MS.gene38095 | -0.800042 | 1.73E-48 | -1.69E-46 |
MS.gene059677 | MS.gene38095 | -0.805268 | 1.45E-49 | -1.69E-46 |
MS.gene059690 | MS.gene38095 | 0.822474 | 2.32E-53 | -1.69E-46 |
MS.gene059694 | MS.gene38095 | 0.821217 | 4.54E-53 | -1.69E-46 |
MS.gene059697 | MS.gene38095 | 0.825626 | 4.23E-54 | -1.69E-46 |
MS.gene059718 | MS.gene38095 | -0.821611 | 3.68E-53 | -1.69E-46 |
MS.gene059865 | MS.gene38095 | -0.852524 | 4.36E-61 | -1.69E-46 |
MS.gene059916 | MS.gene38095 | 0.804476 | 2.12E-49 | -1.69E-46 |
MS.gene059943 | MS.gene38095 | 0.855559 | 5.82E-62 | -1.69E-46 |
MS.gene059944 | MS.gene38095 | 0.827928 | 1.19E-54 | -1.69E-46 |
MS.gene06000 | MS.gene38095 | -0.802273 | 6.07E-49 | -1.69E-46 |
MS.gene060187 | MS.gene38095 | 0.809376 | 1.95E-50 | -1.69E-46 |
MS.gene060482 | MS.gene38095 | -0.856057 | 4.16E-62 | -1.69E-46 |
MS.gene060595 | MS.gene38095 | 0.838932 | 2.14E-57 | -1.69E-46 |
MS.gene060602 | MS.gene38095 | 0.810381 | 1.19E-50 | -1.69E-46 |
MS.gene060703 | MS.gene38095 | -0.812333 | 4.47E-51 | -1.69E-46 |
MS.gene060762 | MS.gene38095 | -0.810578 | 1.07E-50 | -1.69E-46 |
MS.gene060778 | MS.gene38095 | -0.84899 | 4.31E-60 | -1.69E-46 |
MS.gene06077 | MS.gene38095 | -0.864316 | 1.33E-64 | -1.69E-46 |
MS.gene060982 | MS.gene38095 | -0.804831 | 1.79E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene53169 | MS.gene38095 | PPI |
MS.gene93059 | MS.gene38095 | PPI |
MS.gene91446 | MS.gene38095 | PPI |
MS.gene72560 | MS.gene38095 | PPI |
MS.gene99693 | MS.gene38095 | PPI |
MS.gene040151 | MS.gene38095 | PPI |
MS.gene97981 | MS.gene38095 | PPI |
MS.gene062932 | MS.gene38095 | PPI |
MS.gene54933 | MS.gene38095 | PPI |
MS.gene95889 | MS.gene38095 | PPI |
MS.gene93783 | MS.gene38095 | PPI |
MS.gene87111 | MS.gene38095 | PPI |
MS.gene056487 | MS.gene38095 | PPI |
MS.gene55382 | MS.gene38095 | PPI |
MS.gene42146 | MS.gene38095 | PPI |
MS.gene97980 | MS.gene38095 | PPI |
MS.gene42873 | MS.gene38095 | PPI |
MS.gene008794 | MS.gene38095 | PPI |
MS.gene38095 | MS.gene93783 | PPI |
MS.gene50700 | MS.gene38095 | PPI |
MS.gene23359 | MS.gene38095 | PPI |
MS.gene008793 | MS.gene38095 | PPI |
MS.gene003638 | MS.gene38095 | PPI |
MS.gene98697 | MS.gene38095 | PPI |
MS.gene93058 | MS.gene38095 | PPI |
MS.gene62620 | MS.gene38095 | PPI |
MS.gene056488 | MS.gene38095 | PPI |
MS.gene024362 | MS.gene38095 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38095.t1 | MTR_5g097900 | 98.077 | 312 | 6 | 0 | 1 | 312 | 1 | 312 | 0.0 | 630 |
MS.gene38095.t1 | MTR_5g097910 | 97.756 | 312 | 7 | 0 | 1 | 312 | 1 | 312 | 0.0 | 629 |
MS.gene38095.t1 | MTR_5g097940 | 97.756 | 312 | 7 | 0 | 1 | 312 | 1 | 312 | 0.0 | 629 |
MS.gene38095.t1 | MTR_3g083130 | 69.079 | 304 | 93 | 1 | 10 | 312 | 11 | 314 | 2.66e-162 | 454 |
MS.gene38095.t1 | MTR_0374s0050 | 62.951 | 305 | 110 | 3 | 1 | 302 | 1 | 305 | 2.83e-137 | 391 |
MS.gene38095.t1 | MTR_4g072320 | 53.684 | 285 | 125 | 3 | 15 | 297 | 12 | 291 | 9.01e-102 | 301 |
MS.gene38095.t1 | MTR_4g072350 | 51.485 | 303 | 135 | 5 | 20 | 311 | 17 | 318 | 2.67e-100 | 298 |
MS.gene38095.t1 | MTR_4g072360 | 51.748 | 286 | 135 | 3 | 15 | 297 | 12 | 297 | 9.34e-100 | 296 |
MS.gene38095.t1 | MTR_6g073110 | 49.662 | 296 | 146 | 3 | 7 | 300 | 6 | 300 | 5.48e-98 | 291 |
MS.gene38095.t1 | MTR_8g070095 | 42.606 | 284 | 160 | 2 | 19 | 300 | 15 | 297 | 7.30e-75 | 233 |
MS.gene38095.t1 | MTR_4g036845 | 41.404 | 285 | 162 | 4 | 18 | 300 | 12 | 293 | 5.47e-73 | 228 |
MS.gene38095.t1 | MTR_7g063580 | 43.015 | 272 | 143 | 3 | 49 | 311 | 83 | 351 | 1.75e-70 | 223 |
MS.gene38095.t1 | MTR_8g070115 | 43.056 | 288 | 153 | 4 | 19 | 302 | 15 | 295 | 2.99e-70 | 221 |
MS.gene38095.t1 | MTR_4g021350 | 43.206 | 287 | 148 | 5 | 19 | 300 | 15 | 291 | 5.96e-66 | 209 |
MS.gene38095.t1 | MTR_4g021410 | 41.639 | 305 | 150 | 6 | 19 | 312 | 16 | 303 | 4.75e-64 | 204 |
MS.gene38095.t1 | MTR_4g021350 | 43.060 | 281 | 145 | 5 | 19 | 294 | 15 | 285 | 1.22e-63 | 203 |
MS.gene38095.t1 | MTR_4g021410 | 42.491 | 273 | 137 | 4 | 48 | 312 | 6 | 266 | 1.64e-60 | 194 |
MS.gene38095.t1 | MTR_4g021450 | 42.199 | 282 | 149 | 3 | 19 | 300 | 16 | 283 | 2.63e-60 | 195 |
MS.gene38095.t1 | MTR_4g072060 | 39.088 | 307 | 172 | 6 | 15 | 310 | 6 | 308 | 4.01e-59 | 192 |
MS.gene38095.t1 | MTR_7g070500 | 37.857 | 280 | 166 | 5 | 20 | 298 | 23 | 295 | 3.60e-58 | 190 |
MS.gene38095.t1 | MTR_7g070500 | 38.321 | 274 | 161 | 5 | 20 | 292 | 23 | 289 | 1.19e-57 | 188 |
MS.gene38095.t1 | MTR_4g021410 | 41.841 | 239 | 119 | 4 | 82 | 312 | 1 | 227 | 3.71e-47 | 158 |
MS.gene38095.t1 | MTR_4g021450 | 42.922 | 219 | 113 | 2 | 82 | 300 | 1 | 207 | 2.15e-44 | 151 |
MS.gene38095.t1 | MTR_4g021450 | 42.405 | 158 | 88 | 1 | 143 | 300 | 10 | 164 | 7.32e-38 | 133 |
MS.gene38095.t1 | MTR_6g072650 | 44.218 | 147 | 46 | 5 | 176 | 311 | 13 | 134 | 9.01e-28 | 105 |
MS.gene38095.t1 | MTR_6g072710 | 46.018 | 113 | 56 | 2 | 191 | 300 | 1 | 111 | 7.76e-26 | 99.4 |
MS.gene38095.t1 | MTR_3g449790 | 26.316 | 323 | 160 | 12 | 15 | 285 | 42 | 338 | 1.06e-17 | 82.8 |
MS.gene38095.t1 | MTR_3g449790 | 25.836 | 329 | 160 | 13 | 15 | 285 | 42 | 344 | 2.59e-16 | 79.0 |
MS.gene38095.t1 | MTR_7g021850 | 25.087 | 287 | 161 | 9 | 41 | 292 | 43 | 310 | 3.05e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene38095.t1 | AT1G59960 | 54.362 | 298 | 126 | 5 | 10 | 300 | 11 | 305 | 1.81e-112 | 329 |
MS.gene38095.t1 | AT1G59950 | 55.903 | 288 | 117 | 5 | 20 | 300 | 15 | 299 | 6.90e-106 | 312 |
MS.gene38095.t1 | AT2G37770 | 44.056 | 286 | 149 | 4 | 19 | 300 | 15 | 293 | 2.79e-77 | 239 |
MS.gene38095.t1 | AT2G37790 | 43.007 | 286 | 152 | 4 | 19 | 300 | 15 | 293 | 5.21e-76 | 235 |
MS.gene38095.t1 | AT5G62420 | 44.014 | 284 | 153 | 4 | 20 | 300 | 14 | 294 | 1.38e-75 | 234 |
MS.gene38095.t1 | AT5G01670 | 41.901 | 284 | 156 | 6 | 19 | 300 | 23 | 299 | 8.87e-73 | 227 |
MS.gene38095.t1 | AT2G37760 | 42.268 | 291 | 141 | 5 | 19 | 299 | 15 | 288 | 8.86e-72 | 224 |
MS.gene38095.t1 | AT2G37760 | 42.268 | 291 | 141 | 5 | 19 | 299 | 15 | 288 | 8.86e-72 | 224 |
MS.gene38095.t1 | AT2G37760 | 42.708 | 288 | 138 | 5 | 19 | 296 | 15 | 285 | 6.85e-71 | 221 |
MS.gene38095.t1 | AT2G37760 | 42.069 | 290 | 141 | 5 | 19 | 298 | 15 | 287 | 5.05e-70 | 220 |
MS.gene38095.t1 | AT2G37760 | 42.069 | 290 | 141 | 5 | 19 | 298 | 15 | 287 | 5.05e-70 | 220 |
MS.gene38095.t1 | AT3G53880 | 41.696 | 283 | 160 | 3 | 19 | 300 | 15 | 293 | 2.19e-69 | 218 |
MS.gene38095.t1 | AT2G21260 | 39.384 | 292 | 162 | 6 | 15 | 295 | 6 | 293 | 2.09e-67 | 213 |
MS.gene38095.t1 | AT3G53880 | 41.786 | 280 | 152 | 4 | 19 | 294 | 15 | 287 | 5.09e-67 | 212 |
MS.gene38095.t1 | AT5G01670 | 38.264 | 311 | 156 | 7 | 19 | 300 | 23 | 326 | 7.59e-67 | 213 |
MS.gene38095.t1 | AT2G21250 | 38.111 | 307 | 175 | 6 | 15 | 310 | 6 | 308 | 5.21e-66 | 209 |
MS.gene38095.t1 | AT2G37760 | 41.700 | 247 | 123 | 4 | 62 | 298 | 6 | 241 | 1.58e-57 | 186 |
MS.gene38095.t1 | AT2G37760 | 41.700 | 247 | 123 | 4 | 62 | 298 | 6 | 241 | 1.58e-57 | 186 |
MS.gene38095.t1 | AT2G37770 | 47.208 | 197 | 94 | 3 | 19 | 212 | 15 | 204 | 4.15e-54 | 178 |
MS.gene38095.t1 | AT2G21250 | 42.381 | 210 | 110 | 5 | 15 | 217 | 6 | 211 | 2.77e-48 | 162 |
MS.gene38095.t1 | AT2G21260 | 35.455 | 220 | 129 | 5 | 87 | 295 | 8 | 225 | 1.82e-41 | 144 |
MS.gene38095.t1 | AT1G06690 | 26.990 | 289 | 155 | 9 | 35 | 285 | 85 | 355 | 2.57e-19 | 87.8 |
MS.gene38095.t1 | AT1G60680 | 26.888 | 331 | 175 | 16 | 15 | 300 | 14 | 322 | 2.46e-15 | 75.9 |
MS.gene38095.t1 | AT5G53580 | 24.561 | 285 | 160 | 10 | 44 | 290 | 80 | 347 | 2.56e-15 | 76.3 |
MS.gene38095.t1 | AT1G60750 | 25.532 | 282 | 160 | 11 | 44 | 300 | 50 | 306 | 5.95e-12 | 65.9 |
MS.gene38095.t1 | AT1G60690 | 24.921 | 317 | 175 | 13 | 25 | 300 | 27 | 321 | 2.23e-11 | 64.3 |
Find 63 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACTCTTCAATTGGACTATT+TGG | 0.148242 | 5.1:-78306054 | MS.gene38095:CDS |
AATCAAAGATACGCAAATTT+TGG | 0.165725 | 5.1:+78305459 | None:intergenic |
TGCTTGCACCTTTCCTCAAC+GGG | 0.292412 | 5.1:+78305627 | None:intergenic |
TGGACTTGTATTTGATTCAT+TGG | 0.300948 | 5.1:-78306034 | MS.gene38095:CDS |
ATTGGAAATGTAAACTTTCC+AGG | 0.315067 | 5.1:+78305996 | None:intergenic |
GTGTCTATAACCTTGTTTGA+TGG | 0.333209 | 5.1:+78306351 | None:intergenic |
TCATTCTCCATAACTTCATT+TGG | 0.362803 | 5.1:+78305599 | None:intergenic |
AAAATTTGCGTATCTTTGAT+TGG | 0.369647 | 5.1:-78305457 | MS.gene38095:CDS |
TCTTTCTTACATGTGAAGTC+AGG | 0.371382 | 5.1:+78306397 | None:intergenic |
CATTTGATGTGAAAGGTGTT+TGG | 0.375654 | 5.1:-78305953 | MS.gene38095:CDS |
CTTGGACTCACTAAAGCTAT+TGG | 0.375778 | 5.1:-78305906 | MS.gene38095:CDS |
CAAACACCTTTCACATCAAA+TGG | 0.378027 | 5.1:+78305954 | None:intergenic |
AAGAGATCTGCCACATCAAT+TGG | 0.378807 | 5.1:+78305978 | None:intergenic |
AGTCCAGGCTTGGTTGGTCC+AGG | 0.384417 | 5.1:+78305377 | None:intergenic |
TTGCACAAATTTCTCTAAGA+TGG | 0.398611 | 5.1:-78305538 | MS.gene38095:CDS |
TGTTTGTAAGAACCTTTGTT+AGG | 0.404862 | 5.1:+78306464 | None:intergenic |
TTCATGTAGGACTCTTCAAT+TGG | 0.407231 | 5.1:-78306063 | MS.gene38095:intron |
ATCCCTGGACCAACCAAGCC+TGG | 0.412790 | 5.1:-78305380 | MS.gene38095:CDS |
ATTTGATGTGAAAGGTGTTT+GGG | 0.418218 | 5.1:-78305952 | MS.gene38095:CDS |
TCTTTCCTTATCATAGCTCT+TGG | 0.419142 | 5.1:+78305487 | None:intergenic |
TGTTCCCAAGAGCTATGATA+AGG | 0.425757 | 5.1:-78305492 | MS.gene38095:CDS |
TTTGATACTGCTGCTGCCTA+TGG | 0.432708 | 5.1:-78306328 | MS.gene38095:CDS |
CTTTCCTTATCATAGCTCTT+GGG | 0.433848 | 5.1:+78305488 | None:intergenic |
TTGAAAGAGGCAATTGAACT+TGG | 0.435066 | 5.1:-78306280 | MS.gene38095:CDS |
CAGGGGACCAAATGAAGTTA+TGG | 0.449659 | 5.1:-78305606 | MS.gene38095:CDS |
AAGCAGAATCGTTTGATCCC+TGG | 0.463702 | 5.1:-78305395 | MS.gene38095:CDS |
CGTTGAGGAAAGGTGCAAGC+AGG | 0.464952 | 5.1:-78305625 | MS.gene38095:CDS |
AAAGTTTAGAAGTAACAAAA+AGG | 0.467615 | 5.1:+78306239 | None:intergenic |
CTGCTTGCACCTTTCCTCAA+CGG | 0.474588 | 5.1:+78305626 | None:intergenic |
AAGTTTCAAGCTTTCCTCCA+TGG | 0.483539 | 5.1:+78305926 | None:intergenic |
ATGGAGGAAAGCTTGAAACT+TGG | 0.498400 | 5.1:-78305924 | MS.gene38095:CDS |
CTTTCTTACATGTGAAGTCA+GGG | 0.506502 | 5.1:+78306398 | None:intergenic |
CTCTTACCATTTGATGTGAA+AGG | 0.516557 | 5.1:-78305960 | MS.gene38095:CDS |
CAATTGAAGATGCCTGTAGT+TGG | 0.517264 | 5.1:-78306433 | MS.gene38095:CDS |
TCTTGGTGAAGCTTTGAAAG+AGG | 0.518146 | 5.1:-78306293 | MS.gene38095:CDS |
GTCCAGGCTTGGTTGGTCCA+GGG | 0.519273 | 5.1:+78305378 | None:intergenic |
GAGGTCATTGAGTCCAGGCT+TGG | 0.520820 | 5.1:+78305367 | None:intergenic |
AAGAGCTTGTTCTGAGCCAT+AGG | 0.528055 | 5.1:+78306312 | None:intergenic |
GCTGATCCCATTCCAACTAC+AGG | 0.540084 | 5.1:+78306421 | None:intergenic |
TATGGCTCAGAACAAGCTCT+TGG | 0.544655 | 5.1:-78306310 | MS.gene38095:CDS |
GAAGATGCCTGTAGTTGGAA+TGG | 0.546457 | 5.1:-78306428 | MS.gene38095:CDS |
GTTGAGGAAAGGTGCAAGCA+GGG | 0.550606 | 5.1:-78305624 | MS.gene38095:CDS |
TCATTGAGTCCAGGCTTGGT+TGG | 0.552459 | 5.1:+78305371 | None:intergenic |
TGGCCACTTAGTTCTCAGCC+TGG | 0.559322 | 5.1:-78306014 | MS.gene38095:CDS |
AAGATGCCTGTAGTTGGAAT+GGG | 0.562876 | 5.1:-78306427 | MS.gene38095:CDS |
TCATAGAGGTCATTGAGTCC+AGG | 0.572409 | 5.1:+78305362 | None:intergenic |
AGGTGGAGATGAACCTTGCA+TGG | 0.584406 | 5.1:-78305709 | MS.gene38095:CDS |
ATCATTGAAGCCATCAAACA+AGG | 0.587661 | 5.1:-78306361 | MS.gene38095:CDS |
GAAAGGTGTTTGGGAATCCA+TGG | 0.587744 | 5.1:-78305943 | MS.gene38095:CDS |
CTAAGATGGCTATATGAACA+AGG | 0.588672 | 5.1:-78305524 | MS.gene38095:CDS |
TGAATTACTTGATTGACTGC+AGG | 0.596137 | 5.1:+78305825 | None:intergenic |
GTTTACATTTCCAATTGATG+TGG | 0.608506 | 5.1:-78305988 | MS.gene38095:CDS |
TTTCTTACATGTGAAGTCAG+GGG | 0.620409 | 5.1:+78306399 | None:intergenic |
AGAGCAGGAATAACAAGATG+AGG | 0.624425 | 5.1:+78306199 | None:intergenic |
TTGAGGAAAGGTGCAAGCAG+GGG | 0.624444 | 5.1:-78305623 | MS.gene38095:CDS |
CAGGAATAACAAGATGAGGA+TGG | 0.629084 | 5.1:+78306203 | None:intergenic |
TTTCCTCAACGGGGAAAATG+CGG | 0.632608 | 5.1:+78305637 | None:intergenic |
AAAGAGATTGCAGATGCACA+TGG | 0.633321 | 5.1:-78305569 | MS.gene38095:CDS |
TAGTGTTGAAATCCTAACAA+AGG | 0.644239 | 5.1:-78306476 | MS.gene38095:CDS |
TTTCCAGGCTGAGAACTAAG+TGG | 0.647166 | 5.1:+78306011 | None:intergenic |
ATTGACTGCAGGAAGAACAG+TGG | 0.718468 | 5.1:+78305836 | None:intergenic |
AGGTGTTTGGGAATCCATGG+AGG | 0.719619 | 5.1:-78305940 | MS.gene38095:CDS |
GCTTGCACCTTTCCTCAACG+GGG | 0.723595 | 5.1:+78305628 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATCAATATTACATTCATT+TGG | - | chr5.1:78305697-78305716 | MS.gene38095:CDS | 15.0% |
!! | CTAAAAATTAATCAAAACTT+AGG | + | chr5.1:78306046-78306065 | None:intergenic | 15.0% |
!! | AAAGTTTAGAAGTAACAAAA+AGG | + | chr5.1:78305600-78305619 | None:intergenic | 20.0% |
!!! | TTGATTTGTTAATTTCATGT+AGG | - | chr5.1:78305760-78305779 | MS.gene38095:intron | 20.0% |
!!! | TTTTGTTACTTCTAAACTTT+GGG | - | chr5.1:78305600-78305619 | MS.gene38095:CDS | 20.0% |
!!! | TTTTTGTTACTTCTAAACTT+TGG | - | chr5.1:78305599-78305618 | MS.gene38095:CDS | 20.0% |
! | AAAATTTGCGTATCTTTGAT+TGG | - | chr5.1:78306379-78306398 | MS.gene38095:CDS | 25.0% |
! | CAATGAACTCATAAATGTAT+AGG | - | chr5.1:78306107-78306126 | MS.gene38095:intron | 25.0% |
! | TCAATATTACATTCATTTGG+AGG | - | chr5.1:78305700-78305719 | MS.gene38095:CDS | 25.0% |
!! | AATCAAAGATACGCAAATTT+TGG | + | chr5.1:78306380-78306399 | None:intergenic | 25.0% |
ATTGGAAATGTAAACTTTCC+AGG | + | chr5.1:78305843-78305862 | None:intergenic | 30.0% | |
GTTTACATTTCCAATTGATG+TGG | - | chr5.1:78305848-78305867 | MS.gene38095:CDS | 30.0% | |
TCATTCTCCATAACTTCATT+TGG | + | chr5.1:78306240-78306259 | None:intergenic | 30.0% | |
TGAACTCATAAATGTATAGG+TGG | - | chr5.1:78306110-78306129 | MS.gene38095:intron | 30.0% | |
TGGACTTGTATTTGATTCAT+TGG | - | chr5.1:78305802-78305821 | MS.gene38095:intron | 30.0% | |
TGTTTGTAAGAACCTTTGTT+AGG | + | chr5.1:78305375-78305394 | None:intergenic | 30.0% | |
! | TAGTGTTGAAATCCTAACAA+AGG | - | chr5.1:78305360-78305379 | MS.gene38095:CDS | 30.0% |
! | TTGCACAAATTTCTCTAAGA+TGG | - | chr5.1:78306298-78306317 | MS.gene38095:CDS | 30.0% |
!! | ATTTGATGTGAAAGGTGTTT+GGG | - | chr5.1:78305884-78305903 | MS.gene38095:CDS | 30.0% |
ATCATTGAAGCCATCAAACA+AGG | - | chr5.1:78305475-78305494 | MS.gene38095:CDS | 35.0% | |
CAAACACCTTTCACATCAAA+TGG | + | chr5.1:78305885-78305904 | None:intergenic | 35.0% | |
CTAAGATGGCTATATGAACA+AGG | - | chr5.1:78306312-78306331 | MS.gene38095:CDS | 35.0% | |
CTCTTACCATTTGATGTGAA+AGG | - | chr5.1:78305876-78305895 | MS.gene38095:CDS | 35.0% | |
CTTTCCTTATCATAGCTCTT+GGG | + | chr5.1:78306351-78306370 | None:intergenic | 35.0% | |
CTTTCTTACATGTGAAGTCA+GGG | + | chr5.1:78305441-78305460 | None:intergenic | 35.0% | |
GACTCTTCAATTGGACTATT+TGG | - | chr5.1:78305782-78305801 | MS.gene38095:intron | 35.0% | |
TCTTTCCTTATCATAGCTCT+TGG | + | chr5.1:78306352-78306371 | None:intergenic | 35.0% | |
TCTTTCTTACATGTGAAGTC+AGG | + | chr5.1:78305442-78305461 | None:intergenic | 35.0% | |
TGAATTACTTGATTGACTGC+AGG | + | chr5.1:78306014-78306033 | None:intergenic | 35.0% | |
TTCATGTAGGACTCTTCAAT+TGG | - | chr5.1:78305773-78305792 | MS.gene38095:intron | 35.0% | |
TTGAAAGAGGCAATTGAACT+TGG | - | chr5.1:78305556-78305575 | MS.gene38095:CDS | 35.0% | |
TTTCTTACATGTGAAGTCAG+GGG | + | chr5.1:78305440-78305459 | None:intergenic | 35.0% | |
! | GTGTCTATAACCTTGTTTGA+TGG | + | chr5.1:78305488-78305507 | None:intergenic | 35.0% |
!! | CATTTGATGTGAAAGGTGTT+TGG | - | chr5.1:78305883-78305902 | MS.gene38095:CDS | 35.0% |
!! | TTGAGAGATTTTTGAAGAGC+AGG | + | chr5.1:78305655-78305674 | None:intergenic | 35.0% |
AAAGAGATTGCAGATGCACA+TGG | - | chr5.1:78306267-78306286 | MS.gene38095:CDS | 40.0% | |
AAGAGATCTGCCACATCAAT+TGG | + | chr5.1:78305861-78305880 | None:intergenic | 40.0% | |
AAGATGCCTGTAGTTGGAAT+GGG | - | chr5.1:78305409-78305428 | MS.gene38095:CDS | 40.0% | |
AAGTTTCAAGCTTTCCTCCA+TGG | + | chr5.1:78305913-78305932 | None:intergenic | 40.0% | |
AGAGCAGGAATAACAAGATG+AGG | + | chr5.1:78305640-78305659 | None:intergenic | 40.0% | |
ATGGAGGAAAGCTTGAAACT+TGG | - | chr5.1:78305912-78305931 | MS.gene38095:CDS | 40.0% | |
CAATTGAAGATGCCTGTAGT+TGG | - | chr5.1:78305403-78305422 | MS.gene38095:CDS | 40.0% | |
CAGGAATAACAAGATGAGGA+TGG | + | chr5.1:78305636-78305655 | None:intergenic | 40.0% | |
CTTGGACTCACTAAAGCTAT+TGG | - | chr5.1:78305930-78305949 | MS.gene38095:CDS | 40.0% | |
TGTTCCCAAGAGCTATGATA+AGG | - | chr5.1:78306344-78306363 | MS.gene38095:CDS | 40.0% | |
!! | TCTTGGTGAAGCTTTGAAAG+AGG | - | chr5.1:78305543-78305562 | MS.gene38095:CDS | 40.0% |
AAGCAGAATCGTTTGATCCC+TGG | - | chr5.1:78306441-78306460 | MS.gene38095:CDS | 45.0% | |
ATTGACTGCAGGAAGAACAG+TGG | + | chr5.1:78306003-78306022 | None:intergenic | 45.0% | |
CAGGGGACCAAATGAAGTTA+TGG | - | chr5.1:78306230-78306249 | MS.gene38095:CDS | 45.0% | |
GAAGATGCCTGTAGTTGGAA+TGG | - | chr5.1:78305408-78305427 | MS.gene38095:CDS | 45.0% | |
TATGGCTCAGAACAAGCTCT+TGG | - | chr5.1:78305526-78305545 | MS.gene38095:CDS | 45.0% | |
TCATAGAGGTCATTGAGTCC+AGG | + | chr5.1:78306477-78306496 | None:intergenic | 45.0% | |
TTTCCAGGCTGAGAACTAAG+TGG | + | chr5.1:78305828-78305847 | None:intergenic | 45.0% | |
TTTCCTCAACGGGGAAAATG+CGG | + | chr5.1:78306202-78306221 | None:intergenic | 45.0% | |
TTTGATACTGCTGCTGCCTA+TGG | - | chr5.1:78305508-78305527 | MS.gene38095:CDS | 45.0% | |
! | AAGAGCTTGTTCTGAGCCAT+AGG | + | chr5.1:78305527-78305546 | None:intergenic | 45.0% |
! | AGAGAGTTTTGCAACGCACA+CGG | - | chr5.1:78306165-78306184 | MS.gene38095:intron | 45.0% |
! | GCTTCTTTTGTTGCCATGCA+AGG | + | chr5.1:78306143-78306162 | None:intergenic | 45.0% |
!! | GAAAGGTGTTTGGGAATCCA+TGG | - | chr5.1:78305893-78305912 | MS.gene38095:CDS | 45.0% |
AGGTGGAGATGAACCTTGCA+TGG | - | chr5.1:78306127-78306146 | MS.gene38095:intron | 50.0% | |
AGGTGTTTGGGAATCCATGG+AGG | - | chr5.1:78305896-78305915 | MS.gene38095:CDS | 50.0% | |
CTGCTTGCACCTTTCCTCAA+CGG | + | chr5.1:78306213-78306232 | None:intergenic | 50.0% | |
GCTGATCCCATTCCAACTAC+AGG | + | chr5.1:78305418-78305437 | None:intergenic | 50.0% | |
TGCTTGCACCTTTCCTCAAC+GGG | + | chr5.1:78306212-78306231 | None:intergenic | 50.0% | |
! | GCATTTTCCCCGTTGAGGAA+AGG | - | chr5.1:78306201-78306220 | MS.gene38095:CDS | 50.0% |
! | GTTGAGGAAAGGTGCAAGCA+GGG | - | chr5.1:78306212-78306231 | MS.gene38095:CDS | 50.0% |
! | TAACCGCATTTTCCCCGTTG+AGG | - | chr5.1:78306196-78306215 | MS.gene38095:CDS | 50.0% |
! | TCATTGAGTCCAGGCTTGGT+TGG | + | chr5.1:78306468-78306487 | None:intergenic | 50.0% |
! | TTGAGGAAAGGTGCAAGCAG+GGG | - | chr5.1:78306213-78306232 | MS.gene38095:CDS | 50.0% |
GAGGTCATTGAGTCCAGGCT+TGG | + | chr5.1:78306472-78306491 | None:intergenic | 55.0% | |
GCTTGCACCTTTCCTCAACG+GGG | + | chr5.1:78306211-78306230 | None:intergenic | 55.0% | |
! | CGTTGAGGAAAGGTGCAAGC+AGG | - | chr5.1:78306211-78306230 | MS.gene38095:CDS | 55.0% |
! | TGGCCACTTAGTTCTCAGCC+TGG | - | chr5.1:78305822-78305841 | MS.gene38095:intron | 55.0% |
ATCCCTGGACCAACCAAGCC+TGG | - | chr5.1:78306456-78306475 | MS.gene38095:CDS | 60.0% | |
! | AGTCCAGGCTTGGTTGGTCC+AGG | + | chr5.1:78306462-78306481 | None:intergenic | 60.0% |
! | GTCCAGGCTTGGTTGGTCCA+GGG | + | chr5.1:78306461-78306480 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 78305355 | 78306503 | 78305355 | ID=MS.gene38095 |
chr5.1 | mRNA | 78305355 | 78306503 | 78305355 | ID=MS.gene38095.t1;Parent=MS.gene38095 |
chr5.1 | exon | 78306184 | 78306503 | 78306184 | ID=MS.gene38095.t1.exon1;Parent=MS.gene38095.t1 |
chr5.1 | CDS | 78306184 | 78306503 | 78306184 | ID=cds.MS.gene38095.t1;Parent=MS.gene38095.t1 |
chr5.1 | exon | 78305833 | 78306076 | 78305833 | ID=MS.gene38095.t1.exon2;Parent=MS.gene38095.t1 |
chr5.1 | CDS | 78305833 | 78306076 | 78305833 | ID=cds.MS.gene38095.t1;Parent=MS.gene38095.t1 |
chr5.1 | exon | 78305355 | 78305729 | 78305355 | ID=MS.gene38095.t1.exon3;Parent=MS.gene38095.t1 |
chr5.1 | CDS | 78305355 | 78305729 | 78305355 | ID=cds.MS.gene38095.t1;Parent=MS.gene38095.t1 |
Gene Sequence |
Protein sequence |