Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065477.t1 | XP_003624422.2 | 97.2 | 428 | 11 | 1 | 1 | 428 | 2 | 428 | 2.70E-245 | 857.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065477.t1 | Q94K73 | 77.5 | 414 | 88 | 2 | 16 | 428 | 20 | 429 | 4.7e-193 | 675.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065477.t1 | G7KW40 | 97.2 | 428 | 11 | 1 | 1 | 428 | 2 | 428 | 2.0e-245 | 857.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene065477 | 0.80668 | 7.31E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene065477 | 0.816945 | 4.26E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene065477 | 0.850646 | 1.48E-60 | -1.69E-46 |
| MS.gene049491 | MS.gene065477 | 0.804598 | 2.00E-49 | -1.69E-46 |
| MS.gene049614 | MS.gene065477 | 0.831552 | 1.56E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene065477 | 0.834544 | 2.82E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene065477 | 0.829187 | 5.92E-55 | -1.69E-46 |
| MS.gene050333 | MS.gene065477 | 0.812068 | 5.11E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene065477 | 0.83514 | 1.99E-56 | -1.69E-46 |
| MS.gene050747 | MS.gene065477 | 0.81151 | 6.75E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene065477 | 0.819454 | 1.15E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene065477 | 0.825202 | 5.33E-54 | -1.69E-46 |
| MS.gene050772 | MS.gene065477 | 0.824189 | 9.24E-54 | -1.69E-46 |
| MS.gene050812 | MS.gene065477 | 0.80983 | 1.56E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene065477 | 0.807531 | 4.83E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene065477 | 0.826704 | 2.34E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene065477 | 0.801014 | 1.10E-48 | -1.69E-46 |
| MS.gene051228 | MS.gene065477 | 0.807987 | 3.86E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene065477 | 0.832006 | 1.21E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene065477 | 0.824695 | 7.02E-54 | -1.69E-46 |
| MS.gene051692 | MS.gene065477 | 0.839868 | 1.22E-57 | -1.69E-46 |
| MS.gene051694 | MS.gene065477 | 0.829292 | 5.59E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene065477 | 0.830811 | 2.38E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene065477 | 0.815604 | 8.49E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene065477 | 0.829163 | 6.00E-55 | -1.69E-46 |
| MS.gene052326 | MS.gene065477 | 0.805089 | 1.58E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene065477 | 0.822325 | 2.52E-53 | -1.69E-46 |
| MS.gene052421 | MS.gene065477 | 0.828668 | 7.91E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene065477 | 0.809055 | 2.29E-50 | -1.69E-46 |
| MS.gene052870 | MS.gene065477 | 0.800385 | 1.48E-48 | -1.69E-46 |
| MS.gene053103 | MS.gene065477 | 0.826998 | 1.99E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene065477 | 0.819003 | 1.46E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene065477 | 0.809859 | 1.54E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene065477 | 0.860451 | 2.05E-63 | -1.69E-46 |
| MS.gene053384 | MS.gene065477 | 0.829016 | 6.51E-55 | -1.69E-46 |
| MS.gene053449 | MS.gene065477 | 0.808061 | 3.73E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene065477 | 0.811678 | 6.21E-51 | -1.69E-46 |
| MS.gene054376 | MS.gene065477 | 0.812825 | 3.49E-51 | -1.69E-46 |
| MS.gene05455 | MS.gene065477 | 0.825708 | 4.05E-54 | -1.69E-46 |
| MS.gene054802 | MS.gene065477 | 0.820672 | 6.06E-53 | -1.69E-46 |
| MS.gene054803 | MS.gene065477 | 0.818697 | 1.71E-52 | -1.69E-46 |
| MS.gene054804 | MS.gene065477 | 0.819181 | 1.33E-52 | -1.69E-46 |
| MS.gene054955 | MS.gene065477 | 0.81656 | 5.19E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene065477 | 0.829854 | 4.08E-55 | -1.69E-46 |
| MS.gene055212 | MS.gene065477 | 0.800989 | 1.11E-48 | -1.69E-46 |
| MS.gene055397 | MS.gene065477 | 0.803176 | 3.95E-49 | -1.69E-46 |
| MS.gene055412 | MS.gene065477 | 0.811981 | 5.33E-51 | -1.69E-46 |
| MS.gene055499 | MS.gene065477 | 0.804435 | 2.16E-49 | -1.69E-46 |
| MS.gene055636 | MS.gene065477 | 0.834404 | 3.06E-56 | -1.69E-46 |
| MS.gene055647 | MS.gene065477 | 0.836816 | 7.50E-57 | -1.69E-46 |
| MS.gene055722 | MS.gene065477 | 0.841495 | 4.59E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene065477 | 0.813361 | 2.66E-51 | -1.69E-46 |
| MS.gene055930 | MS.gene065477 | 0.832254 | 1.05E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene065477 | 0.808406 | 3.15E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene065477 | 0.805665 | 1.20E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene065477 | 0.801052 | 1.08E-48 | -1.69E-46 |
| MS.gene056410 | MS.gene065477 | 0.847583 | 1.06E-59 | -1.69E-46 |
| MS.gene056511 | MS.gene065477 | 0.806643 | 7.45E-50 | -1.69E-46 |
| MS.gene056549 | MS.gene065477 | 0.858737 | 6.71E-63 | -1.69E-46 |
| MS.gene056609 | MS.gene065477 | 0.806552 | 7.78E-50 | -1.69E-46 |
| MS.gene056897 | MS.gene065477 | 0.824818 | 6.57E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene065477 | 0.845631 | 3.60E-59 | -1.69E-46 |
| MS.gene057123 | MS.gene065477 | 0.831544 | 1.57E-55 | -1.69E-46 |
| MS.gene057129 | MS.gene065477 | 0.821036 | 5.00E-53 | -1.69E-46 |
| MS.gene057146 | MS.gene065477 | 0.875339 | 3.33E-68 | -1.69E-46 |
| MS.gene057285 | MS.gene065477 | 0.819213 | 1.31E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene065477 | 0.820408 | 6.97E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene065477 | 0.846896 | 1.63E-59 | -1.69E-46 |
| MS.gene057856 | MS.gene065477 | 0.808684 | 2.74E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene065477 | 0.811147 | 8.10E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene065477 | 0.836073 | 1.16E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene065477 | 0.813606 | 2.35E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene065477 | 0.825952 | 3.54E-54 | -1.69E-46 |
| MS.gene058323 | MS.gene065477 | 0.813554 | 2.41E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene065477 | 0.837024 | 6.63E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene065477 | 0.815736 | 7.93E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene065477 | 0.804697 | 1.91E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene065477 | 0.831229 | 1.88E-55 | -1.69E-46 |
| MS.gene059326 | MS.gene065477 | 0.803555 | 3.30E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene065477 | 0.824521 | 7.72E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene065477 | 0.885118 | 1.07E-71 | -1.69E-46 |
| MS.gene059597 | MS.gene065477 | 0.825427 | 4.72E-54 | -1.69E-46 |
| MS.gene05959 | MS.gene065477 | 0.813495 | 2.49E-51 | -1.69E-46 |
| MS.gene059676 | MS.gene065477 | 0.856676 | 2.74E-62 | -1.69E-46 |
| MS.gene059688 | MS.gene065477 | 0.830325 | 3.13E-55 | -1.69E-46 |
| MS.gene059692 | MS.gene065477 | 0.820326 | 7.28E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene065477 | 0.820618 | 6.24E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene065477 | 0.804641 | 1.96E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene065477 | 0.827027 | 1.96E-54 | -1.69E-46 |
| MS.gene059960 | MS.gene065477 | 0.873714 | 1.19E-67 | -1.69E-46 |
| MS.gene060193 | MS.gene065477 | 0.853461 | 2.35E-61 | -1.69E-46 |
| MS.gene060403 | MS.gene065477 | 0.800463 | 1.42E-48 | -1.69E-46 |
| MS.gene060804 | MS.gene065477 | 0.837305 | 5.62E-57 | -1.69E-46 |
| MS.gene060818 | MS.gene065477 | 0.850519 | 1.61E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene065477 | 0.82767 | 1.38E-54 | -1.69E-46 |
| MS.gene061041 | MS.gene065477 | 0.81266 | 3.79E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene065477 | 0.81218 | 4.83E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene065477 | 0.878179 | 3.46E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065477.t1 | MTR_7g083030 | 97.196 | 428 | 11 | 1 | 1 | 428 | 2 | 428 | 0.0 | 868 |
| MS.gene065477.t1 | MTR_7g083030 | 97.594 | 374 | 8 | 1 | 1 | 374 | 2 | 374 | 0.0 | 761 |
| MS.gene065477.t1 | MTR_8g046320 | 63.333 | 60 | 16 | 1 | 71 | 130 | 96 | 149 | 7.73e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065477.t1 | AT3G58140 | 79.644 | 393 | 79 | 1 | 37 | 428 | 37 | 429 | 0.0 | 672 |
Find 98 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATGATGGATTGGTAAA+TGG | 0.148676 | 7.3:-24921759 | None:intergenic |
| GGAAAAGTGGTTGGAGGTTT+TGG | 0.167441 | 7.3:+24922934 | MS.gene065477:intron |
| AATAATGTGGCTTGGGCTTT+TGG | 0.185517 | 7.3:+24923004 | MS.gene065477:CDS |
| CATGTAGATGGAAGGCTTTC+GGG | 0.192058 | 7.3:+24920885 | MS.gene065477:intron |
| GCTACAAGGACATCAGTTTC+TGG | 0.241259 | 7.3:+24924043 | MS.gene065477:CDS |
| GGTCTAGCACGCCATTTATT+TGG | 0.274438 | 7.3:+24920988 | MS.gene065477:CDS |
| CAGACTCACTTCCTTGTTAC+TGG | 0.290649 | 7.3:+24920739 | MS.gene065477:CDS |
| ATTTGCAAATACCAAATAAA+TGG | 0.292920 | 7.3:-24920999 | None:intergenic |
| TACCGGATATTCGTCTCTTT+TGG | 0.305942 | 7.3:+24923065 | MS.gene065477:CDS |
| TGGATTGGTAAATGGGAAAT+AGG | 0.307506 | 7.3:-24921751 | None:intergenic |
| CAGTTCTCCAAGGGCCAGTT+AGG | 0.327821 | 7.3:+24923286 | MS.gene065477:intron |
| TCATGTAGATGGAAGGCTTT+CGG | 0.328640 | 7.3:+24920884 | MS.gene065477:intron |
| CAAGAGATTCTGAAAAGAAA+TGG | 0.334132 | 7.3:+24922974 | MS.gene065477:CDS |
| CTCCTACTCACATGGTCTTC+AGG | 0.337485 | 7.3:-24920631 | None:intergenic |
| CAAATGATGGATTGGTAAAT+GGG | 0.349427 | 7.3:-24921758 | None:intergenic |
| GCTTAAATTTGATCCCTAAC+TGG | 0.360988 | 7.3:-24923300 | None:intergenic |
| AATTTGTGTGAAGTTGTTAG+AGG | 0.365693 | 7.3:+24924090 | MS.gene065477:CDS |
| GTTCTCTCTGCAGTGGAGAT+TGG | 0.368288 | 7.3:+24919102 | MS.gene065477:CDS |
| CCAGACGAATGGGAGGCATC+TGG | 0.383187 | 7.3:+24920916 | MS.gene065477:CDS |
| TGAACTTGAAATATATTTCA+AGG | 0.384152 | 7.3:+24921779 | MS.gene065477:CDS |
| TAGGATTGCATATAGATCTA+TGG | 0.385783 | 7.3:+24925876 | MS.gene065477:CDS |
| GCTTCGATTTCTTGCGAGAA+AGG | 0.395058 | 7.3:-24919071 | None:intergenic |
| AGATCTGGTACAGAACAAAT+TGG | 0.397598 | 7.3:+24926057 | MS.gene065477:CDS |
| GTGCCACACAAGTGCTCATC+AGG | 0.405655 | 7.3:+24920696 | MS.gene065477:CDS |
| GCTAGTCATTCCTTTCTTGT+TGG | 0.408903 | 7.3:-24925845 | None:intergenic |
| TATATTTCAAGTTCAAATGA+TGG | 0.411951 | 7.3:-24921771 | None:intergenic |
| TCCCATTGTTTCACTAAAGC+AGG | 0.417601 | 7.3:+24919975 | MS.gene065477:CDS |
| GAATGACTAGCCACTGCTAT+AGG | 0.420827 | 7.3:+24925857 | MS.gene065477:CDS |
| TTCAAGTTCAAATGATGGAT+TGG | 0.426209 | 7.3:-24921766 | None:intergenic |
| CCAGAACTTTGATGATGTCT+TGG | 0.433665 | 7.3:+24920606 | MS.gene065477:intron |
| GAAATCTAATAATGTGGCTT+GGG | 0.441045 | 7.3:+24922997 | MS.gene065477:CDS |
| GTAGAAGTTACCTTTGAAAA+CGG | 0.443632 | 7.3:-24923322 | None:intergenic |
| AGGAGGGATCAACACCCTCT+TGG | 0.447438 | 7.3:+24919877 | MS.gene065477:CDS |
| GGAAATCTAATAATGTGGCT+TGG | 0.453728 | 7.3:+24922996 | MS.gene065477:CDS |
| CCAGATGCCTCCCATTCGTC+TGG | 0.453771 | 7.3:-24920916 | None:intergenic |
| AAGAGATTCTGAAAAGAAAT+GGG | 0.459133 | 7.3:+24922975 | MS.gene065477:CDS |
| ATCTCCACTGCAGAGAGAAC+TGG | 0.459375 | 7.3:-24919099 | None:intergenic |
| AACTTGGAATGCAGCTTCAT+AGG | 0.462486 | 7.3:+24919857 | MS.gene065477:CDS |
| GACAATTTCACCAACAAGAA+AGG | 0.464674 | 7.3:+24925835 | MS.gene065477:CDS |
| GGAGGGATCAACACCCTCTT+GGG | 0.471379 | 7.3:+24919878 | MS.gene065477:CDS |
| TGGCACCTTAAAACAGTTTG+AGG | 0.471696 | 7.3:-24920679 | None:intergenic |
| GAAGTTGTTAGAGGAGTAGC+GGG | 0.474332 | 7.3:+24924099 | MS.gene065477:CDS |
| TGGGAGGCATCTGGGACGGA+TGG | 0.476406 | 7.3:+24920925 | MS.gene065477:CDS |
| CAGATTGTTAATTTCATCAT+CGG | 0.476616 | 7.3:-24925911 | None:intergenic |
| AAGACCTAAAGAAATGCCTT+GGG | 0.483761 | 7.3:+24920965 | MS.gene065477:CDS |
| GAAGACCTAAAGAAATGCCT+TGG | 0.485590 | 7.3:+24920964 | MS.gene065477:CDS |
| AGGTTTGGAGAGGTTAGCTA+TGG | 0.487707 | 7.3:+24923030 | MS.gene065477:CDS |
| GACCAAAAGAGACGAATATC+CGG | 0.488025 | 7.3:-24923067 | None:intergenic |
| TTTGATCCCTAACTGGCCCT+TGG | 0.490169 | 7.3:-24923293 | None:intergenic |
| CTCTCTGCAGTGGAGATTGG+TGG | 0.500612 | 7.3:+24919105 | MS.gene065477:CDS |
| GTCTCAGGAAAAGTGGTTGG+AGG | 0.505575 | 7.3:+24922928 | MS.gene065477:intron |
| CAGGTGACGTGGAAATGCGC+TGG | 0.510601 | 7.3:+24921721 | MS.gene065477:intron |
| GGACATACTTGATGGAAGAC+AGG | 0.511865 | 7.3:-24920802 | None:intergenic |
| CAGACGAATGGGAGGCATCT+GGG | 0.512177 | 7.3:+24920917 | MS.gene065477:CDS |
| GCAGTGGAAAGTAAGAGATC+TGG | 0.513269 | 7.3:+24926042 | MS.gene065477:intron |
| CTGTCTGGAACATTATTTGT+TGG | 0.517372 | 7.3:-24919823 | None:intergenic |
| TGATGAAATTAACAATCTGC+AGG | 0.522651 | 7.3:+24925915 | MS.gene065477:CDS |
| TACTGGAGATGTTTATCGAA+GGG | 0.523038 | 7.3:+24920756 | MS.gene065477:CDS |
| TATGGTTCTATTTGACATAC+CGG | 0.523107 | 7.3:+24923048 | MS.gene065477:CDS |
| TGAAGTTGTTAGAGGAGTAG+CGG | 0.528932 | 7.3:+24924098 | MS.gene065477:CDS |
| TTTGATATCATGTAGATGGA+AGG | 0.529389 | 7.3:+24920877 | MS.gene065477:intron |
| CCCTTGTACTTCAGGTGACG+TGG | 0.530683 | 7.3:+24921710 | MS.gene065477:intron |
| TTTCTTGCGAGAAAGGTTGT+TGG | 0.533020 | 7.3:-24919064 | None:intergenic |
| TTTGTCTCAGGAAAAGTGGT+TGG | 0.539106 | 7.3:+24922925 | MS.gene065477:intron |
| ACCTGCTTTAGTGAAACAAT+GGG | 0.540880 | 7.3:-24919976 | None:intergenic |
| AGTTCTCCAAGGGCCAGTTA+GGG | 0.546188 | 7.3:+24923287 | MS.gene065477:intron |
| GGCACCTTAAAACAGTTTGA+GGG | 0.554011 | 7.3:-24920678 | None:intergenic |
| TTGGAATGCAGCTTCATAGG+AGG | 0.555950 | 7.3:+24919860 | MS.gene065477:CDS |
| TTAGTGAAACAATGGGAGAA+AGG | 0.557845 | 7.3:-24919969 | None:intergenic |
| CATTCTTGATTATCCCAAGA+GGG | 0.562797 | 7.3:-24919891 | None:intergenic |
| GTCAAAGTAATAATAGCCTA+AGG | 0.566859 | 7.3:+24918992 | MS.gene065477:CDS |
| CAGGCAGAATTATTGAGAGA+TGG | 0.568817 | 7.3:+24920715 | MS.gene065477:CDS |
| TGGTCGTTTAGATGTAGTGA+AGG | 0.571887 | 7.3:+24919792 | MS.gene065477:intron |
| TACCTGCTTTAGTGAAACAA+TGG | 0.575321 | 7.3:-24919977 | None:intergenic |
| ACAGTATCCTCCTTGCTACA+AGG | 0.579898 | 7.3:+24924029 | MS.gene065477:intron |
| AGCGGGAGATCTTGTTGAAG+AGG | 0.582951 | 7.3:+24924116 | MS.gene065477:CDS |
| CGTTATAGCTCCTACTCACA+TGG | 0.588415 | 7.3:-24920639 | None:intergenic |
| TTACTGGAGATGTTTATCGA+AGG | 0.593612 | 7.3:+24920755 | MS.gene065477:CDS |
| CGAATGGGAGGCATCTGGGA+CGG | 0.600095 | 7.3:+24920921 | MS.gene065477:CDS |
| GAAGCAGCGGAAGATGAGAA+AGG | 0.601877 | 7.3:-24919033 | None:intergenic |
| TGATGAGCGATTTACCTCCC+AGG | 0.602322 | 7.3:+24923093 | MS.gene065477:CDS |
| GTTGGCAGAGAGAGAAGCAG+CGG | 0.603802 | 7.3:-24919046 | None:intergenic |
| AAATGGGAAATCTAATAATG+TGG | 0.604431 | 7.3:+24922991 | MS.gene065477:CDS |
| AGGTGACGTGGAAATGCGCT+GGG | 0.604854 | 7.3:+24921722 | MS.gene065477:intron |
| GCTGCCAGTTCTCTCTGCAG+TGG | 0.612655 | 7.3:+24919095 | MS.gene065477:CDS |
| TGGAATGCAGCTTCATAGGA+GGG | 0.619208 | 7.3:+24919861 | MS.gene065477:CDS |
| AAACTGATGTCCTTGTAGCA+AGG | 0.623794 | 7.3:-24924039 | None:intergenic |
| CTGCCTGATGAGCACTTGTG+TGG | 0.624174 | 7.3:-24920699 | None:intergenic |
| GATAAACATCTCCAGTAACA+AGG | 0.635298 | 7.3:-24920750 | None:intergenic |
| GACCTAAAGAAATGCCTTGG+GGG | 0.635849 | 7.3:+24920967 | MS.gene065477:CDS |
| GACATACTTGATGGAAGACA+GGG | 0.664877 | 7.3:-24920801 | None:intergenic |
| TATATGCAATCCTATAGCAG+TGG | 0.667775 | 7.3:-24925867 | None:intergenic |
| GCATTCTTGATTATCCCAAG+AGG | 0.675459 | 7.3:-24919892 | None:intergenic |
| AGACCTAAAGAAATGCCTTG+GGG | 0.677778 | 7.3:+24920966 | MS.gene065477:CDS |
| TTCCTGAAGACCATGTGAGT+AGG | 0.684735 | 7.3:+24920629 | MS.gene065477:CDS |
| GGAGTCAAGATTACAAGACA+AGG | 0.689845 | 7.3:+24919126 | MS.gene065477:CDS |
| CTGATGTCCTTGTAGCAAGG+AGG | 0.690224 | 7.3:-24924036 | None:intergenic |
| ATGTTCAATAAATACCTGGG+AGG | 0.736871 | 7.3:-24923107 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 24918952 | 24926096 | 24918952 | ID=MS.gene065477 |
| chr7.3 | mRNA | 24918952 | 24926096 | 24918952 | ID=MS.gene065477.t1;Parent=MS.gene065477 |
| chr7.3 | exon | 24918952 | 24919147 | 24918952 | ID=MS.gene065477.t1.exon1;Parent=MS.gene065477.t1 |
| chr7.3 | CDS | 24918952 | 24919147 | 24918952 | ID=cds.MS.gene065477.t1;Parent=MS.gene065477.t1 |
| chr7.3 | exon | 24919803 | 24919996 | 24919803 | ID=MS.gene065477.t1.exon2;Parent=MS.gene065477.t1 |
| chr7.3 | CDS | 24919803 | 24919996 | 24919803 | ID=cds.MS.gene065477.t1;Parent=MS.gene065477.t1 |
| chr7.3 | exon | 24920610 | 24920816 | 24920610 | ID=MS.gene065477.t1.exon3;Parent=MS.gene065477.t1 |
| chr7.3 | CDS | 24920610 | 24920816 | 24920610 | ID=cds.MS.gene065477.t1;Parent=MS.gene065477.t1 |
| chr7.3 | exon | 24920892 | 24921009 | 24920892 | ID=MS.gene065477.t1.exon4;Parent=MS.gene065477.t1 |
| chr7.3 | CDS | 24920892 | 24921009 | 24920892 | ID=cds.MS.gene065477.t1;Parent=MS.gene065477.t1 |
| chr7.3 | exon | 24921724 | 24921800 | 24921724 | ID=MS.gene065477.t1.exon5;Parent=MS.gene065477.t1 |
| chr7.3 | CDS | 24921724 | 24921800 | 24921724 | ID=cds.MS.gene065477.t1;Parent=MS.gene065477.t1 |
| chr7.3 | exon | 24922935 | 24923114 | 24922935 | ID=MS.gene065477.t1.exon6;Parent=MS.gene065477.t1 |
| chr7.3 | CDS | 24922935 | 24923114 | 24922935 | ID=cds.MS.gene065477.t1;Parent=MS.gene065477.t1 |
| chr7.3 | exon | 24923289 | 24923333 | 24923289 | ID=MS.gene065477.t1.exon7;Parent=MS.gene065477.t1 |
| chr7.3 | CDS | 24923289 | 24923333 | 24923289 | ID=cds.MS.gene065477.t1;Parent=MS.gene065477.t1 |
| chr7.3 | exon | 24924033 | 24924137 | 24924033 | ID=MS.gene065477.t1.exon8;Parent=MS.gene065477.t1 |
| chr7.3 | CDS | 24924033 | 24924137 | 24924033 | ID=cds.MS.gene065477.t1;Parent=MS.gene065477.t1 |
| chr7.3 | exon | 24925823 | 24925936 | 24925823 | ID=MS.gene065477.t1.exon9;Parent=MS.gene065477.t1 |
| chr7.3 | CDS | 24925823 | 24925936 | 24925823 | ID=cds.MS.gene065477.t1;Parent=MS.gene065477.t1 |
| chr7.3 | exon | 24926046 | 24926096 | 24926046 | ID=MS.gene065477.t1.exon10;Parent=MS.gene065477.t1 |
| chr7.3 | CDS | 24926046 | 24926096 | 24926046 | ID=cds.MS.gene065477.t1;Parent=MS.gene065477.t1 |
| Gene Sequence |
| Protein sequence |
