Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069679.t1 | XP_013452780.1 | 98.2 | 499 | 9 | 0 | 1 | 499 | 1 | 499 | 3.10E-288 | 1000.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069679.t1 | P54767 | 77.2 | 499 | 109 | 1 | 6 | 499 | 4 | 502 | 2.0e-232 | 806.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069679.t1 | A0A072UCM6 | 98.2 | 499 | 9 | 0 | 1 | 499 | 1 | 499 | 2.2e-288 | 1000.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene069679 | 0.831178 | 1.93E-55 | -1.69E-46 |
| MS.gene049151 | MS.gene069679 | 0.81737 | 3.42E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene069679 | 0.821459 | 3.99E-53 | -1.69E-46 |
| MS.gene049260 | MS.gene069679 | 0.879989 | 7.94E-70 | -1.69E-46 |
| MS.gene049378 | MS.gene069679 | 0.817738 | 2.82E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene069679 | 0.87114 | 8.57E-67 | -1.69E-46 |
| MS.gene049910 | MS.gene069679 | 0.802109 | 6.56E-49 | -1.69E-46 |
| MS.gene049915 | MS.gene069679 | 0.800646 | 1.31E-48 | -1.69E-46 |
| MS.gene050128 | MS.gene069679 | 0.860559 | 1.90E-63 | -1.69E-46 |
| MS.gene050226 | MS.gene069679 | 0.800868 | 1.18E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene069679 | 0.835897 | 1.28E-56 | -1.69E-46 |
| MS.gene050623 | MS.gene069679 | -0.822118 | 2.81E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene069679 | 0.822865 | 1.88E-53 | -1.69E-46 |
| MS.gene050762 | MS.gene069679 | 0.8575 | 1.56E-62 | -1.69E-46 |
| MS.gene050763 | MS.gene069679 | 0.8583 | 9.06E-63 | -1.69E-46 |
| MS.gene050987 | MS.gene069679 | 0.815381 | 9.52E-52 | -1.69E-46 |
| MS.gene05119 | MS.gene069679 | -0.826341 | 2.86E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene069679 | 0.82761 | 1.42E-54 | -1.69E-46 |
| MS.gene051662 | MS.gene069679 | 0.802879 | 4.55E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene069679 | 0.807857 | 4.12E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene069679 | 0.827033 | 1.96E-54 | -1.69E-46 |
| MS.gene051983 | MS.gene069679 | 0.845545 | 3.80E-59 | -1.69E-46 |
| MS.gene052077 | MS.gene069679 | 0.834509 | 2.88E-56 | -1.69E-46 |
| MS.gene052178 | MS.gene069679 | 0.844399 | 7.74E-59 | -1.69E-46 |
| MS.gene052188 | MS.gene069679 | 0.819093 | 1.39E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene069679 | 0.832023 | 1.20E-55 | -1.69E-46 |
| MS.gene053073 | MS.gene069679 | 0.852154 | 5.56E-61 | -1.69E-46 |
| MS.gene05316 | MS.gene069679 | 0.853377 | 2.49E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene069679 | 0.823942 | 1.06E-53 | -1.69E-46 |
| MS.gene053557 | MS.gene069679 | 0.827848 | 1.25E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene069679 | 0.863452 | 2.47E-64 | -1.69E-46 |
| MS.gene053928 | MS.gene069679 | 0.80828 | 3.35E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene069679 | 0.801896 | 7.25E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene069679 | 0.846756 | 1.78E-59 | -1.69E-46 |
| MS.gene054473 | MS.gene069679 | 0.820778 | 5.73E-53 | -1.69E-46 |
| MS.gene054542 | MS.gene069679 | 0.817781 | 2.76E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene069679 | 0.853502 | 2.29E-61 | -1.69E-46 |
| MS.gene055277 | MS.gene069679 | 0.826776 | 2.25E-54 | -1.69E-46 |
| MS.gene055422 | MS.gene069679 | 0.833664 | 4.68E-56 | -1.69E-46 |
| MS.gene055428 | MS.gene069679 | 0.828351 | 9.44E-55 | -1.69E-46 |
| MS.gene055604 | MS.gene069679 | 0.843591 | 1.28E-58 | -1.69E-46 |
| MS.gene055666 | MS.gene069679 | 0.8207 | 5.97E-53 | -1.69E-46 |
| MS.gene055712 | MS.gene069679 | 0.818141 | 2.29E-52 | -1.69E-46 |
| MS.gene055859 | MS.gene069679 | 0.805786 | 1.13E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene069679 | -0.815197 | 1.05E-51 | -1.69E-46 |
| MS.gene056314 | MS.gene069679 | 0.820349 | 7.19E-53 | -1.69E-46 |
| MS.gene056612 | MS.gene069679 | 0.805779 | 1.13E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene069679 | 0.804753 | 1.86E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene069679 | 0.83242 | 9.55E-56 | -1.69E-46 |
| MS.gene05702 | MS.gene069679 | 0.845217 | 4.66E-59 | -1.69E-46 |
| MS.gene057439 | MS.gene069679 | 0.844894 | 5.70E-59 | -1.69E-46 |
| MS.gene057448 | MS.gene069679 | 0.82547 | 4.61E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene069679 | 0.807827 | 4.18E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene069679 | 0.836658 | 8.23E-57 | -1.69E-46 |
| MS.gene057469 | MS.gene069679 | 0.825995 | 3.46E-54 | -1.69E-46 |
| MS.gene057690 | MS.gene069679 | 0.835308 | 1.81E-56 | -1.69E-46 |
| MS.gene057754 | MS.gene069679 | 0.82822 | 1.01E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene069679 | 0.822291 | 2.56E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene069679 | 0.818791 | 1.63E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene069679 | 0.823783 | 1.15E-53 | -1.69E-46 |
| MS.gene058142 | MS.gene069679 | 0.831288 | 1.82E-55 | -1.69E-46 |
| MS.gene058435 | MS.gene069679 | 0.81704 | 4.05E-52 | -1.69E-46 |
| MS.gene058710 | MS.gene069679 | 0.810797 | 9.64E-51 | -1.69E-46 |
| MS.gene058749 | MS.gene069679 | 0.833556 | 4.98E-56 | -1.69E-46 |
| MS.gene058845 | MS.gene069679 | 0.8014 | 9.17E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene069679 | 0.814704 | 1.35E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene069679 | 0.807589 | 4.69E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene069679 | 0.854777 | 9.82E-62 | -1.69E-46 |
| MS.gene059518 | MS.gene069679 | 0.834869 | 2.34E-56 | -1.69E-46 |
| MS.gene059597 | MS.gene069679 | 0.813712 | 2.23E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene069679 | 0.800906 | 1.16E-48 | -1.69E-46 |
| MS.gene05984 | MS.gene069679 | 0.829997 | 3.76E-55 | -1.69E-46 |
| MS.gene059894 | MS.gene069679 | 0.861926 | 7.28E-64 | -1.69E-46 |
| MS.gene059899 | MS.gene069679 | 0.850303 | 1.85E-60 | -1.69E-46 |
| MS.gene059974 | MS.gene069679 | 0.807412 | 5.12E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene069679 | 0.826438 | 2.71E-54 | -1.69E-46 |
| MS.gene06037 | MS.gene069679 | 0.839106 | 1.93E-57 | -1.69E-46 |
| MS.gene060476 | MS.gene069679 | 0.837136 | 6.21E-57 | -1.69E-46 |
| MS.gene060495 | MS.gene069679 | 0.853257 | 2.69E-61 | -1.69E-46 |
| MS.gene060943 | MS.gene069679 | 0.825878 | 3.69E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene069679 | 0.862969 | 3.48E-64 | -1.69E-46 |
| MS.gene061051 | MS.gene069679 | -0.802532 | 5.36E-49 | -1.69E-46 |
| MS.gene061112 | MS.gene069679 | 0.833192 | 6.14E-56 | -1.69E-46 |
| MS.gene061113 | MS.gene069679 | 0.832214 | 1.07E-55 | -1.69E-46 |
| MS.gene061159 | MS.gene069679 | 0.81013 | 1.34E-50 | -1.69E-46 |
| MS.gene061265 | MS.gene069679 | 0.841895 | 3.60E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069679.t1 | MTR_6g075210 | 98.196 | 499 | 9 | 0 | 1 | 499 | 1 | 499 | 0.0 | 1021 |
| MS.gene069679.t1 | MTR_3g064740 | 76.056 | 497 | 110 | 2 | 1 | 491 | 1 | 494 | 0.0 | 786 |
| MS.gene069679.t1 | MTR_5g077090 | 72.414 | 493 | 126 | 3 | 16 | 499 | 4 | 495 | 0.0 | 751 |
| MS.gene069679.t1 | MTR_6g075210 | 98.634 | 366 | 5 | 0 | 134 | 499 | 1 | 366 | 0.0 | 749 |
| MS.gene069679.t1 | MTR_3g064740 | 75.439 | 399 | 92 | 1 | 99 | 491 | 1 | 399 | 0.0 | 628 |
| MS.gene069679.t1 | MTR_6g075210 | 98.697 | 307 | 4 | 0 | 193 | 499 | 1 | 307 | 0.0 | 626 |
| MS.gene069679.t1 | MTR_7g022310 | 25.762 | 361 | 238 | 10 | 86 | 436 | 159 | 499 | 1.07e-19 | 92.4 |
| MS.gene069679.t1 | MTR_5g075840 | 45.977 | 87 | 37 | 1 | 367 | 443 | 30 | 116 | 9.25e-15 | 72.0 |
| MS.gene069679.t1 | MTR_5g075820 | 76.923 | 39 | 9 | 0 | 255 | 293 | 15 | 53 | 3.76e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069679.t1 | AT2G02010 | 77.778 | 495 | 101 | 2 | 1 | 495 | 1 | 486 | 0.0 | 813 |
| MS.gene069679.t1 | AT2G02010 | 77.778 | 495 | 101 | 2 | 1 | 495 | 53 | 538 | 0.0 | 813 |
| MS.gene069679.t1 | AT5G17330 | 75.835 | 509 | 106 | 4 | 1 | 499 | 1 | 502 | 0.0 | 793 |
| MS.gene069679.t1 | AT3G17760 | 77.800 | 491 | 102 | 3 | 12 | 499 | 8 | 494 | 0.0 | 792 |
| MS.gene069679.t1 | AT3G17760 | 77.800 | 491 | 102 | 3 | 12 | 499 | 8 | 494 | 0.0 | 792 |
| MS.gene069679.t1 | AT1G65960 | 75.848 | 501 | 112 | 3 | 1 | 499 | 1 | 494 | 0.0 | 786 |
| MS.gene069679.t1 | AT2G02000 | 74.899 | 494 | 115 | 2 | 1 | 494 | 1 | 485 | 0.0 | 784 |
| MS.gene069679.t1 | AT1G65960 | 75.272 | 368 | 86 | 2 | 134 | 499 | 1 | 365 | 0.0 | 573 |
| MS.gene069679.t1 | AT1G65960 | 75.272 | 368 | 86 | 2 | 134 | 499 | 1 | 365 | 0.0 | 573 |
| MS.gene069679.t1 | AT1G65960 | 75.272 | 368 | 86 | 2 | 134 | 499 | 1 | 365 | 0.0 | 573 |
| MS.gene069679.t1 | AT3G17720 | 74.074 | 162 | 39 | 1 | 94 | 255 | 27 | 185 | 2.00e-82 | 254 |
| MS.gene069679.t1 | AT1G27980 | 24.586 | 362 | 241 | 11 | 84 | 434 | 160 | 500 | 5.54e-17 | 84.3 |
Find 105 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCTGTGTTGCAGCCATTT+TGG | 0.165886 | 6.1:-66980550 | MS.gene069679:CDS |
| CTGGTATTGGTTGGGTTGTT+TGG | 0.223066 | 6.1:-66980311 | MS.gene069679:CDS |
| TTCTCTACCCTGATCTTCTA+TGG | 0.227683 | 6.1:-66980398 | MS.gene069679:CDS |
| CTCAATACTACCAATTTATA+CGG | 0.248455 | 6.1:-66980032 | MS.gene069679:CDS |
| ATCTGATATGCTGCATCTTT+TGG | 0.270173 | 6.1:+66983297 | None:intergenic |
| TCCTGTCACCACTGAGCTTC+AGG | 0.274757 | 6.1:-66983139 | MS.gene069679:intron |
| CTGTCCTCCGAGTGGTGATT+AGG | 0.312016 | 6.1:-66979565 | MS.gene069679:CDS |
| CGAAGCCAAGCCGTATAAAT+TGG | 0.316347 | 6.1:+66980022 | None:intergenic |
| AGACTCACGGTGAGATTCTT+AGG | 0.343419 | 6.1:-66979385 | MS.gene069679:CDS |
| AATATATTACACAGGTTTGT+TGG | 0.344916 | 6.1:-66980680 | MS.gene069679:intron |
| TTCTAGATACGTGCGTGAAC+AGG | 0.356943 | 6.1:-66983440 | MS.gene069679:CDS |
| CGGAAATCCCATAGAAGATC+AGG | 0.359620 | 6.1:+66980390 | None:intergenic |
| GGTCTTGTTTACCCTGGTAT+TGG | 0.363471 | 6.1:-66980324 | MS.gene069679:CDS |
| CAATGCTCCTATTGGTGAAC+AGG | 0.364446 | 6.1:-66981980 | MS.gene069679:CDS |
| TAACAAGAACTATGTTGATA+TGG | 0.366188 | 6.1:-66983169 | MS.gene069679:CDS |
| GAGGCATAAAGCTGACTTGC+CGG | 0.372412 | 6.1:-66980289 | MS.gene069679:CDS |
| GCAGTTTCCTGTTCACCAAT+AGG | 0.375491 | 6.1:+66981973 | None:intergenic |
| GGTCAGCGTTGAACCCAAAA+TGG | 0.377604 | 6.1:+66980536 | None:intergenic |
| AATGATGAGTTGATGTTAGA+TGG | 0.378531 | 6.1:-66983270 | MS.gene069679:CDS |
| CATCTATTCAATGCTCCTAT+TGG | 0.381425 | 6.1:-66981988 | MS.gene069679:CDS |
| TGGCTTCATTTGTTACTACT+TGG | 0.383718 | 6.1:-66983230 | MS.gene069679:CDS |
| ACGGTGAGATTCTTAGGTAT+TGG | 0.384876 | 6.1:-66979379 | MS.gene069679:CDS |
| ATATATTACACAGGTTTGTT+GGG | 0.397699 | 6.1:-66980679 | MS.gene069679:intron |
| ACCATTTCAACAGCTTTCAA+TGG | 0.408300 | 6.1:+66980585 | None:intergenic |
| AAATGTGATGGAAAATTGTT+TGG | 0.410205 | 6.1:-66979786 | MS.gene069679:CDS |
| TACTACCAATTTATACGGCT+TGG | 0.415144 | 6.1:-66980027 | MS.gene069679:CDS |
| AAAATTTGCTAGATACTTTG+AGG | 0.418983 | 6.1:-66980655 | MS.gene069679:CDS |
| TGTCCTCCGAGTGGTGATTA+GGG | 0.420453 | 6.1:-66979564 | MS.gene069679:CDS |
| TTGTTTACCCTGGTATTGGT+TGG | 0.425703 | 6.1:-66980320 | MS.gene069679:CDS |
| AAAATACGGGTGGATAGTTC+CGG | 0.431504 | 6.1:-66979621 | MS.gene069679:CDS |
| TGTTTACCCTGGTATTGGTT+GGG | 0.431991 | 6.1:-66980319 | MS.gene069679:CDS |
| GATAAGCCTAACATAGTTAC+CGG | 0.434270 | 6.1:-66981847 | MS.gene069679:CDS |
| ACTATGTTAGGCTTATCATA+TGG | 0.434829 | 6.1:+66981853 | None:intergenic |
| TTAGCTCCGGTAACTATGTT+AGG | 0.434904 | 6.1:+66981841 | None:intergenic |
| GCAGACCATTTGAGAAAATA+CGG | 0.437901 | 6.1:-66979635 | MS.gene069679:CDS |
| ATACTTTGAGGTTGAGCTAA+AGG | 0.439469 | 6.1:-66980643 | MS.gene069679:CDS |
| GAGAAATTCAATGTGAAAGT+TGG | 0.439670 | 6.1:+66980225 | None:intergenic |
| AAGGAAGGAATTGAGAAAAC+AGG | 0.440850 | 6.1:-66979746 | MS.gene069679:CDS |
| ATTTATACGGCTTGGCTTCG+AGG | 0.445868 | 6.1:-66980019 | MS.gene069679:intron |
| TTCATTTGTTACTACTTGGA+TGG | 0.447228 | 6.1:-66983226 | MS.gene069679:CDS |
| TGGAAAACCAAGGCTTAACT+TGG | 0.451331 | 6.1:-66983250 | MS.gene069679:CDS |
| AACGCTGACCGGAGAGTTCG+AGG | 0.454423 | 6.1:-66980523 | MS.gene069679:CDS |
| TCTCTACCCTGATCTTCTAT+GGG | 0.463816 | 6.1:-66980397 | MS.gene069679:CDS |
| GTATTGGTTGGGTTGTTTGG+AGG | 0.473665 | 6.1:-66980308 | MS.gene069679:CDS |
| AATGAAGCCAAGTTAAGCCT+TGG | 0.475959 | 6.1:+66983243 | None:intergenic |
| CAAGAGAGTTGGAGCATGCT+AGG | 0.479668 | 6.1:-66979339 | None:intergenic |
| GCAGTAGGTGTTGGAACTGT+AGG | 0.480901 | 6.1:-66981952 | MS.gene069679:CDS |
| CAAACAACCCAACCAATACC+AGG | 0.491052 | 6.1:+66980312 | None:intergenic |
| CTAGCAGCATCTACATGAAT+CGG | 0.491158 | 6.1:+66980441 | None:intergenic |
| TCCATTGAAAGCTGTTGAAA+TGG | 0.494508 | 6.1:-66980586 | MS.gene069679:CDS |
| AAAATTGTCTCCAAGGACAT+AGG | 0.500052 | 6.1:-66979716 | MS.gene069679:CDS |
| ATGGGATTTCCGTTTGCCGT+TGG | 0.504123 | 6.1:-66980379 | MS.gene069679:CDS |
| TGCGTCCGCTGGCATTGTGT+AGG | 0.512284 | 6.1:+66979598 | None:intergenic |
| CTTGTGGATGGCAAGAGAGT+TGG | 0.513748 | 6.1:-66979350 | MS.gene069679:CDS |
| ACCTGAAGCTCAGTGGTGAC+AGG | 0.517726 | 6.1:+66983138 | None:intergenic |
| AAGGTTTAAAATTGTCTCCA+AGG | 0.518110 | 6.1:-66979723 | MS.gene069679:CDS |
| TCCGCTGGCATTGTGTAGGC+CGG | 0.520444 | 6.1:+66979602 | None:intergenic |
| AAGTGGCACACCTATGTCCT+TGG | 0.528819 | 6.1:+66979706 | None:intergenic |
| GTCATCAGAGGCAATAATGC+TGG | 0.532016 | 6.1:-66981929 | MS.gene069679:CDS |
| TGAGTGTGATAAGCTTATCA+TGG | 0.535116 | 6.1:-66983199 | MS.gene069679:CDS |
| GCTGCTGTCTTTCAGAGAGA+AGG | 0.536335 | 6.1:+66979679 | None:intergenic |
| AGAAGATCAGGGTAGAGAAA+CGG | 0.536404 | 6.1:+66980402 | None:intergenic |
| ATCAACCTGCACATTAGCTC+CGG | 0.537707 | 6.1:+66981828 | None:intergenic |
| CTTCACATCCTCGAACTCTC+CGG | 0.541249 | 6.1:+66980515 | None:intergenic |
| CAGGAAACTGCAGTAGGTGT+TGG | 0.543640 | 6.1:-66981961 | MS.gene069679:CDS |
| CAGTAGGTGTTGGAACTGTA+GGG | 0.543728 | 6.1:-66981951 | MS.gene069679:CDS |
| GGAAGATTTCAGCTGCAGCT+TGG | 0.547015 | 6.1:-66979543 | MS.gene069679:CDS |
| AAAAGAATAAGGAGACAGGA+TGG | 0.547117 | 6.1:-66980470 | MS.gene069679:CDS |
| AATGTTAGCGGTCACAAGTA+CGG | 0.552630 | 6.1:-66980345 | MS.gene069679:CDS |
| TTCAAAAGATGCTCATGTTG+CGG | 0.558105 | 6.1:-66979453 | MS.gene069679:CDS |
| CACAGAGGATTACTATGTCA+TGG | 0.560296 | 6.1:-66980610 | MS.gene069679:CDS |
| GGCGAACACAAGAATTCTGA+AGG | 0.562592 | 6.1:-66979765 | MS.gene069679:CDS |
| GTGAAAAGTATCAATGTTAG+CGG | 0.565895 | 6.1:-66980357 | MS.gene069679:CDS |
| TTCACATTGAATTTCTCCAA+AGG | 0.571801 | 6.1:-66980219 | MS.gene069679:intron |
| CAAAATGGCTGCAACACAGA+TGG | 0.582491 | 6.1:+66980551 | None:intergenic |
| TCAGAGGCAATAATGCTGGC+TGG | 0.584457 | 6.1:-66981925 | MS.gene069679:CDS |
| AAAGAATAAGGAGACAGGAT+GGG | 0.591516 | 6.1:-66980469 | MS.gene069679:CDS |
| AACACAAGAATTCTGAAGGA+AGG | 0.596220 | 6.1:-66979761 | MS.gene069679:CDS |
| TAGGTATTGGAAGAAACTTG+TGG | 0.605147 | 6.1:-66979366 | MS.gene069679:CDS |
| CATGTAGATGCTGCTAGTGG+CGG | 0.606366 | 6.1:-66980435 | MS.gene069679:CDS |
| ATGATAAGCTTATCACACTC+AGG | 0.609818 | 6.1:+66983201 | None:intergenic |
| AGAAGCGAAAGTGCATGCTA+TGG | 0.612340 | 6.1:+66983459 | None:intergenic |
| AAGGAATTGAGAAAACAGGA+AGG | 0.618569 | 6.1:-66979742 | MS.gene069679:CDS |
| TATTGGAAGAAACTTGTGGA+TGG | 0.624449 | 6.1:-66979362 | MS.gene069679:CDS |
| GGAAATCCCATAGAAGATCA+GGG | 0.625993 | 6.1:+66980391 | None:intergenic |
| ATTCATGTAGATGCTGCTAG+TGG | 0.627095 | 6.1:-66980438 | MS.gene069679:CDS |
| CAGACCATTTGAGAAAATAC+GGG | 0.628218 | 6.1:-66979634 | MS.gene069679:CDS |
| AGTTACCGGAGCTAATGTGC+AGG | 0.628397 | 6.1:-66981833 | MS.gene069679:intron |
| AAGTACGGTCTTGTTTACCC+TGG | 0.636562 | 6.1:-66980330 | MS.gene069679:CDS |
| ACCATTTGAGAAAATACGGG+TGG | 0.649671 | 6.1:-66979631 | MS.gene069679:CDS |
| TTCAGAGAGAAGGCTACAAG+TGG | 0.654016 | 6.1:+66979689 | None:intergenic |
| AATCTTCCCTAATCACCACT+CGG | 0.661532 | 6.1:+66979558 | None:intergenic |
| GGTGAACAGGAAACTGCAGT+AGG | 0.669458 | 6.1:-66981967 | MS.gene069679:CDS |
| TGGAACTGTAGGGTCATCAG+AGG | 0.671933 | 6.1:-66981941 | MS.gene069679:CDS |
| AAAGATATTACAGAGACTCA+CGG | 0.675085 | 6.1:-66979398 | MS.gene069679:CDS |
| TATCGCGAGTGAGACAAGCA+AGG | 0.682003 | 6.1:-66979429 | MS.gene069679:CDS |
| CAGACTAAGAGAAAATCAGA+AGG | 0.687264 | 6.1:-66981880 | MS.gene069679:CDS |
| GTGCTATTATATTCACACAC+CGG | 0.687463 | 6.1:+66982010 | None:intergenic |
| TGATGTTAGATGGAAAACCA+AGG | 0.691803 | 6.1:-66983260 | MS.gene069679:CDS |
| TCCGGCCTACACAATGCCAG+CGG | 0.698888 | 6.1:-66979603 | MS.gene069679:CDS |
| AAACAACCCAACCAATACCA+GGG | 0.700278 | 6.1:+66980313 | None:intergenic |
| TAAACAAACCTGAAGCTCAG+TGG | 0.702836 | 6.1:+66983131 | None:intergenic |
| ACACATCGCTGTCCTCCGAG+TGG | 0.704085 | 6.1:-66979573 | MS.gene069679:CDS |
| CTTCCCTAATCACCACTCGG+AGG | 0.723923 | 6.1:+66979561 | None:intergenic |
| AAAGGAAGTGAAACTCACAG+AGG | 0.773932 | 6.1:-66980625 | MS.gene069679:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCATTATAGTTTGAAATT+GGG | + | chr6.1:66980291-66980310 | None:intergenic | 15.0% |
| !! | AATTATTATTGCACAGTAAA+AGG | - | chr6.1:66980464-66980483 | MS.gene069679:CDS | 20.0% |
| !! | ACTTCTTACTAAAAAGAATA+AGG | - | chr6.1:66982364-66982383 | MS.gene069679:intron | 20.0% |
| !! | ATTATTATTGCACAGTAAAA+GGG | - | chr6.1:66980465-66980484 | MS.gene069679:CDS | 20.0% |
| !! | CAATTTATGACAAAATTCAA+AGG | + | chr6.1:66982674-66982693 | None:intergenic | 20.0% |
| !! | GATGAAACAATAAATTTAGT+GGG | + | chr6.1:66981691-66981710 | None:intergenic | 20.0% |
| !! | TCAAGTAAATATATTACCTT+TGG | + | chr6.1:66982645-66982664 | None:intergenic | 20.0% |
| !! | TGATGAAACAATAAATTTAG+TGG | + | chr6.1:66981692-66981711 | None:intergenic | 20.0% |
| !!! | AAATTCTTGATTTTACCTAA+AGG | + | chr6.1:66981350-66981369 | None:intergenic | 20.0% |
| !!! | CATTCATTATAGTTTGAAAT+TGG | + | chr6.1:66980292-66980311 | None:intergenic | 20.0% |
| !!! | CTTTGAATTTTGTCATAAAT+TGG | - | chr6.1:66982672-66982691 | MS.gene069679:intron | 20.0% |
| !!! | GGATCAAATTTTAAACTAAA+AGG | - | chr6.1:66980125-66980144 | MS.gene069679:intron | 20.0% |
| !!! | GGGAAAATATCATTTTTTAA+TGG | - | chr6.1:66980609-66980628 | MS.gene069679:CDS | 20.0% |
| !!! | TTGATCAAGATTTTAAATTG+TGG | - | chr6.1:66979752-66979771 | MS.gene069679:CDS | 20.0% |
| !!! | TTGTAAGTATCAAATTTTGA+GGG | + | chr6.1:66980642-66980661 | None:intergenic | 20.0% |
| ! | AATAAGACTAAGTACATGTT+TGG | - | chr6.1:66979820-66979839 | MS.gene069679:intron | 25.0% |
| ! | AATATATTACACAGGTTTGT+TGG | - | chr6.1:66982165-66982184 | MS.gene069679:intron | 25.0% |
| ! | ACCTCATTACAAAAAAAACT+AGG | + | chr6.1:66979473-66979492 | None:intergenic | 25.0% |
| ! | AGTTTCTCTCTTTAAATCTA+AGG | - | chr6.1:66980222-66980241 | MS.gene069679:CDS | 25.0% |
| ! | CTATATCAACACATAAACAT+AGG | + | chr6.1:66979503-66979522 | None:intergenic | 25.0% |
| ! | CTCAATACTACCAATTTATA+CGG | - | chr6.1:66982813-66982832 | MS.gene069679:intron | 25.0% |
| ! | CTGTTACAATTGAAATTTCT+TGG | - | chr6.1:66980738-66980757 | MS.gene069679:intron | 25.0% |
| ! | GAAATACAAAGCAACATTAA+GGG | + | chr6.1:66982766-66982785 | None:intergenic | 25.0% |
| ! | GTAATATATTTACTTGACAC+AGG | - | chr6.1:66982648-66982667 | MS.gene069679:intron | 25.0% |
| ! | GTCGTTTAAATATATTACAC+AGG | - | chr6.1:66982157-66982176 | MS.gene069679:intron | 25.0% |
| ! | TAACAAGAACTATGTTGATA+TGG | - | chr6.1:66979676-66979695 | MS.gene069679:CDS | 25.0% |
| !! | AAATGTGATGGAAAATTGTT+TGG | - | chr6.1:66983059-66983078 | MS.gene069679:intron | 25.0% |
| !! | ACACAAAAGCTTAATTTTTC+TGG | + | chr6.1:66981315-66981334 | None:intergenic | 25.0% |
| !! | ATATATTACACAGGTTTGTT+GGG | - | chr6.1:66982166-66982185 | MS.gene069679:intron | 25.0% |
| !! | CTATGTTTATGTGTTGATAT+AGG | - | chr6.1:66979501-66979520 | MS.gene069679:CDS | 25.0% |
| !! | GTGTACATCTAAAATGATTT+CGG | + | chr6.1:66981290-66981309 | None:intergenic | 25.0% |
| !! | GTTGTAAGTATCAAATTTTG+AGG | + | chr6.1:66980643-66980662 | None:intergenic | 25.0% |
| !! | GTTTTTCACATCAATTATCT+TGG | - | chr6.1:66982587-66982606 | MS.gene069679:intron | 25.0% |
| !! | TAAATTGATGGATGAGTTTA+AGG | + | chr6.1:66980152-66980171 | None:intergenic | 25.0% |
| !! | TATTTTCCCTTTCTTCAAAA+AGG | + | chr6.1:66980598-66980617 | None:intergenic | 25.0% |
| !! | TCTTTTGAATTGATAGAACT+TGG | + | chr6.1:66983381-66983400 | None:intergenic | 25.0% |
| !! | TGTACATCTAAAATGATTTC+GGG | + | chr6.1:66981289-66981308 | None:intergenic | 25.0% |
| !!! | AAAATTTGCTAGATACTTTG+AGG | - | chr6.1:66982190-66982209 | MS.gene069679:intron | 25.0% |
| !!! | AAGTCTTGATTTTGAGTAAT+TGG | - | chr6.1:66980346-66980365 | MS.gene069679:CDS | 25.0% |
| !!! | AATTTTGATTCTACAATGCT+AGG | + | chr6.1:66981813-66981832 | None:intergenic | 25.0% |
| !!! | ACCTAGTTTTTTTTGTAATG+AGG | - | chr6.1:66979469-66979488 | MS.gene069679:CDS | 25.0% |
| !!! | AGTCTTGATTTTGAGTAATT+GGG | - | chr6.1:66980347-66980366 | MS.gene069679:CDS | 25.0% |
| !!! | ATGATAGTTTTAAGGAGTAA+AGG | + | chr6.1:66980560-66980579 | None:intergenic | 25.0% |
| !!! | TGTTATTTTTCTTGCTCTAA+GGG | - | chr6.1:66983030-66983049 | MS.gene069679:intron | 25.0% |
| !!! | TTTGATCTTTGAAACTTGTT+TGG | - | chr6.1:66980392-66980411 | MS.gene069679:CDS | 25.0% |
| AAACGACATTAAACATAGAG+AGG | + | chr6.1:66982144-66982163 | None:intergenic | 30.0% | |
| AAAGATATTACAGAGACTCA+CGG | - | chr6.1:66983447-66983466 | MS.gene069679:CDS | 30.0% | |
| AACAATATGCAAAACCACAT+AGG | + | chr6.1:66981431-66981450 | None:intergenic | 30.0% | |
| ACAATATGCAAAACCACATA+GGG | + | chr6.1:66981430-66981449 | None:intergenic | 30.0% | |
| ACAATATTCATAAGCTACCA+TGG | + | chr6.1:66981987-66982006 | None:intergenic | 30.0% | |
| ACACCATATTGAAACTATAG+TGG | - | chr6.1:66980104-66980123 | MS.gene069679:intron | 30.0% | |
| ACACTTCTGATCAAAATTGT+TGG | - | chr6.1:66981567-66981586 | MS.gene069679:intron | 30.0% | |
| ACTAAAAAGAATAAGGAGAC+AGG | - | chr6.1:66982371-66982390 | MS.gene069679:intron | 30.0% | |
| ACTATGTTAGGCTTATCATA+TGG | + | chr6.1:66980995-66981014 | None:intergenic | 30.0% | |
| AGAAAAAGTTGTGAATCTCT+TGG | - | chr6.1:66983347-66983366 | MS.gene069679:intron | 30.0% | |
| ATACTCAAGGACTAAATTGA+TGG | + | chr6.1:66980164-66980183 | None:intergenic | 30.0% | |
| ATCAATTTAGTCCTTGAGTA+TGG | - | chr6.1:66980163-66980182 | MS.gene069679:intron | 30.0% | |
| ATGTGAAAAACAAGATCATC+CGG | + | chr6.1:66982578-66982597 | None:intergenic | 30.0% | |
| GAAGAAAAAGACACTTACTT+AGG | + | chr6.1:66979433-66979452 | None:intergenic | 30.0% | |
| GAGAAATTCAATGTGAAAGT+TGG | + | chr6.1:66982623-66982642 | None:intergenic | 30.0% | |
| GATCCACTATAGTTTCAATA+TGG | + | chr6.1:66980110-66980129 | None:intergenic | 30.0% | |
| GGAAATACAAAGCAACATTA+AGG | + | chr6.1:66982767-66982786 | None:intergenic | 30.0% | |
| TAAGAAACTACACATGACTT+TGG | + | chr6.1:66981396-66981415 | None:intergenic | 30.0% | |
| TATACTCTCATCCATCAATT+TGG | + | chr6.1:66980190-66980209 | None:intergenic | 30.0% | |
| TTCACATTGAATTTCTCCAA+AGG | - | chr6.1:66982626-66982645 | MS.gene069679:intron | 30.0% | |
| TTGTTATGAAATGCAATAGC+AGG | - | chr6.1:66981446-66981465 | MS.gene069679:intron | 30.0% | |
| ! | AAGGTTTAAAATTGTCTCCA+AGG | - | chr6.1:66983122-66983141 | MS.gene069679:intron | 30.0% |
| ! | AATAGGTAGAAGAGTATGTT+TGG | - | chr6.1:66981116-66981135 | MS.gene069679:intron | 30.0% |
| ! | ACATTGATACTTTTCACCAA+CGG | + | chr6.1:66982485-66982504 | None:intergenic | 30.0% |
| ! | ATGTAGCTTTTGCAAAATCA+GGG | - | chr6.1:66979883-66979902 | MS.gene069679:intron | 30.0% |
| ! | ATTTTGCAAAAGCTACATCA+GGG | + | chr6.1:66979881-66979900 | None:intergenic | 30.0% |
| ! | CTTTTTAGATCATCTGTGTT+TGG | - | chr6.1:66980665-66980684 | MS.gene069679:CDS | 30.0% |
| ! | TCTTTTGGTATAGAATTCTC+TGG | + | chr6.1:66979536-66979555 | None:intergenic | 30.0% |
| ! | TTCATTTGTTACTACTTGGA+TGG | - | chr6.1:66979619-66979638 | MS.gene069679:CDS | 30.0% |
| ! | TTGGTGTTTGGATGAAAATT+TGG | - | chr6.1:66980684-66980703 | MS.gene069679:intron | 30.0% |
| ! | TTTTGACAAAAGCTACACTT+TGG | + | chr6.1:66981194-66981213 | None:intergenic | 30.0% |
| !! | AAGTTGCCTTTTTGAAGAAA+GGG | - | chr6.1:66980589-66980608 | MS.gene069679:CDS | 30.0% |
| !! | AATGATGAGTTGATGTTAGA+TGG | - | chr6.1:66979575-66979594 | MS.gene069679:CDS | 30.0% |
| !! | AGCAGAGAATGATAGTTTTA+AGG | + | chr6.1:66980568-66980587 | None:intergenic | 30.0% |
| !! | GTGAAAAGTATCAATGTTAG+CGG | - | chr6.1:66982488-66982507 | MS.gene069679:intron | 30.0% |
| !! | TCAGTACTTTCAAGTTTCAA+TGG | + | chr6.1:66980778-66980797 | None:intergenic | 30.0% |
| !!! | CTAGGTGTGATGTTTTTTTA+AGG | + | chr6.1:66979455-66979474 | None:intergenic | 30.0% |
| !!! | CTGTTATTTTTCTTGCTCTA+AGG | - | chr6.1:66983029-66983048 | MS.gene069679:intron | 30.0% |
| !!! | GTTTAGCTTTTAAAAGGAAG+TGG | - | chr6.1:66980942-66980961 | MS.gene069679:intron | 30.0% |
| AAAAGAATAAGGAGACAGGA+TGG | - | chr6.1:66982375-66982394 | MS.gene069679:intron | 35.0% | |
| AAAATTGTCTCCAAGGACAT+AGG | - | chr6.1:66983129-66983148 | MS.gene069679:intron | 35.0% | |
| AAAGAATAAGGAGACAGGAT+GGG | - | chr6.1:66982376-66982395 | MS.gene069679:intron | 35.0% | |
| AAAGTCTGCAACCACAATTT+CGG | + | chr6.1:66980318-66980337 | None:intergenic | 35.0% | |
| AAGGAAGGAATTGAGAAAAC+AGG | - | chr6.1:66983099-66983118 | MS.gene069679:intron | 35.0% | |
| AAGGAATTGAGAAAACAGGA+AGG | - | chr6.1:66983103-66983122 | MS.gene069679:intron | 35.0% | |
| AATGAATGTAGCCGAAATTG+TGG | - | chr6.1:66980304-66980323 | MS.gene069679:CDS | 35.0% | |
| ACCATTTCAACAGCTTTCAA+TGG | + | chr6.1:66982263-66982282 | None:intergenic | 35.0% | |
| AGACACTTGTGAAACTGTTT+GGG | - | chr6.1:66981921-66981940 | MS.gene069679:CDS | 35.0% | |
| AGTATGTTTGGATAAGTGGT+GGG | - | chr6.1:66981128-66981147 | MS.gene069679:intron | 35.0% | |
| ATCAATTTGGTCCATACTCA+AGG | + | chr6.1:66980177-66980196 | None:intergenic | 35.0% | |
| ATGATAAGCTTATCACACTC+AGG | + | chr6.1:66979647-66979666 | None:intergenic | 35.0% | |
| ATGCTCACATCATGAGAAAT+AGG | - | chr6.1:66981099-66981118 | MS.gene069679:intron | 35.0% | |
| CAGACCATTTGAGAAAATAC+GGG | - | chr6.1:66983211-66983230 | MS.gene069679:CDS | 35.0% | |
| CAGACTAAGAGAAAATCAGA+AGG | - | chr6.1:66980965-66980984 | MS.gene069679:intron | 35.0% | |
| CAGTGAGATTGACAAAATCA+CGG | + | chr6.1:66981229-66981248 | None:intergenic | 35.0% | |
| CATCTATTCAATGCTCCTAT+TGG | - | chr6.1:66980857-66980876 | MS.gene069679:intron | 35.0% | |
| GATAAGCCTAACATAGTTAC+CGG | - | chr6.1:66980998-66981017 | MS.gene069679:intron | 35.0% | |
| GCAGACCATTTGAGAAAATA+CGG | - | chr6.1:66983210-66983229 | MS.gene069679:CDS | 35.0% | |
| TAAGGGCTACAAAAATGTGA+TGG | - | chr6.1:66983047-66983066 | MS.gene069679:intron | 35.0% | |
| TACTACCAATTTATACGGCT+TGG | - | chr6.1:66982818-66982837 | MS.gene069679:intron | 35.0% | |
| TAGACACTTGTGAAACTGTT+TGG | - | chr6.1:66981920-66981939 | MS.gene069679:CDS | 35.0% | |
| TATTGGAAGAAACTTGTGGA+TGG | - | chr6.1:66983483-66983502 | MS.gene069679:CDS | 35.0% | |
| TCAAGCACATACTTGAGATT+TGG | + | chr6.1:66982874-66982893 | None:intergenic | 35.0% | |
| TCCATTGAAAGCTGTTGAAA+TGG | - | chr6.1:66982259-66982278 | MS.gene069679:intron | 35.0% | |
| TGAGTGTGATAAGCTTATCA+TGG | - | chr6.1:66979646-66979665 | MS.gene069679:CDS | 35.0% | |
| TGATGTTAGATGGAAAACCA+AGG | - | chr6.1:66979585-66979604 | MS.gene069679:CDS | 35.0% | |
| TGTTGTCTAATGTGTCCTTT+AGG | - | chr6.1:66981332-66981351 | MS.gene069679:intron | 35.0% | |
| TTAGTGGGATATGTATGTAG+TGG | + | chr6.1:66981676-66981695 | None:intergenic | 35.0% | |
| TTCAAAAGATGCTCATGTTG+CGG | - | chr6.1:66983392-66983411 | MS.gene069679:intron | 35.0% | |
| TTGAGTATGGACCAAATTGA+TGG | - | chr6.1:66980176-66980195 | MS.gene069679:intron | 35.0% | |
| TTTGTTCGATTATGCAGAAC+CGG | - | chr6.1:66980816-66980835 | MS.gene069679:intron | 35.0% | |
| ! | AACACAAGAATTCTGAAGGA+AGG | - | chr6.1:66983084-66983103 | MS.gene069679:intron | 35.0% |
| ! | ATCTGATATGCTGCATCTTT+TGG | + | chr6.1:66979551-66979570 | None:intergenic | 35.0% |
| ! | CGATTGATGTGTCGTATTTT+GGG | - | chr6.1:66981847-66981866 | MS.gene069679:CDS | 35.0% |
| ! | GAAGAGTATGTTTGGATAAG+TGG | - | chr6.1:66981124-66981143 | MS.gene069679:intron | 35.0% |
| ! | GATGTAGCTTTTGCAAAATC+AGG | - | chr6.1:66979882-66979901 | MS.gene069679:intron | 35.0% |
| ! | GATTGATGTGTCGTATTTTG+GGG | - | chr6.1:66981848-66981867 | MS.gene069679:CDS | 35.0% |
| ! | GATTTTGCAAAAGCTACATC+AGG | + | chr6.1:66979882-66979901 | None:intergenic | 35.0% |
| ! | GCATAGACACTTTTGATCAA+AGG | + | chr6.1:66981631-66981650 | None:intergenic | 35.0% |
| ! | GTGCTATTATATTCACACAC+CGG | + | chr6.1:66980838-66980857 | None:intergenic | 35.0% |
| ! | TGGCTTCATTTGTTACTACT+TGG | - | chr6.1:66979615-66979634 | MS.gene069679:CDS | 35.0% |
| !! | AAAGCTTTGTTCATTCTCAG+GGG | - | chr6.1:66981751-66981770 | MS.gene069679:intron | 35.0% |
| !! | AATGAACAAAGCTTTGAGAC+AGG | + | chr6.1:66981746-66981765 | None:intergenic | 35.0% |
| !! | ATACTTTGAGGTTGAGCTAA+AGG | - | chr6.1:66982202-66982221 | MS.gene069679:intron | 35.0% |
| !! | ATGAACAAAGCTTTGAGACA+GGG | + | chr6.1:66981745-66981764 | None:intergenic | 35.0% |
| !! | ATTTTGATCAGAAGTGTGTG+TGG | + | chr6.1:66981564-66981583 | None:intergenic | 35.0% |
| !! | CAAAAGTGTCTATGCTTCAT+AGG | - | chr6.1:66981636-66981655 | MS.gene069679:intron | 35.0% |
| !! | CAAAGCTTTGTTCATTCTCA+GGG | - | chr6.1:66981750-66981769 | MS.gene069679:intron | 35.0% |
| !! | CAAGTTGCCTTTTTGAAGAA+AGG | - | chr6.1:66980588-66980607 | MS.gene069679:CDS | 35.0% |
| !! | TAGGTATTGGAAGAAACTTG+TGG | - | chr6.1:66983479-66983498 | MS.gene069679:CDS | 35.0% |
| !! | TCAAAGCTTTGTTCATTCTC+AGG | - | chr6.1:66981749-66981768 | MS.gene069679:intron | 35.0% |
| !!! | TGGCTGGTTTAGCTTTTAAA+AGG | - | chr6.1:66980936-66980955 | MS.gene069679:intron | 35.0% |
| AAAATACGGGTGGATAGTTC+CGG | - | chr6.1:66983224-66983243 | MS.gene069679:CDS | 40.0% | |
| AAACAACCCAACCAATACCA+GGG | + | chr6.1:66982535-66982554 | None:intergenic | 40.0% | |
| AAAGGAAGTGAAACTCACAG+AGG | - | chr6.1:66982220-66982239 | MS.gene069679:intron | 40.0% | |
| AATCTTCCCTAATCACCACT+CGG | + | chr6.1:66983290-66983309 | None:intergenic | 40.0% | |
| AATGAAGCCAAGTTAAGCCT+TGG | + | chr6.1:66979605-66979624 | None:intergenic | 40.0% | |
| AATGTTAGCGGTCACAAGTA+CGG | - | chr6.1:66982500-66982519 | MS.gene069679:intron | 40.0% | |
| ACAAAATCACAATACTGCCG+TGG | + | chr6.1:66981164-66981183 | None:intergenic | 40.0% | |
| ACATTTCCATAAGCTCTCCA+TGG | - | chr6.1:66981967-66981986 | MS.gene069679:CDS | 40.0% | |
| ACCATTTGAGAAAATACGGG+TGG | - | chr6.1:66983214-66983233 | MS.gene069679:CDS | 40.0% | |
| ACCTGATTCTGACAAACCTA+CGG | - | chr6.1:66979912-66979931 | MS.gene069679:intron | 40.0% | |
| ACGGTGAGATTCTTAGGTAT+TGG | - | chr6.1:66983466-66983485 | MS.gene069679:CDS | 40.0% | |
| AGAAGATCAGGGTAGAGAAA+CGG | + | chr6.1:66982446-66982465 | None:intergenic | 40.0% | |
| ATATTGTGATGCAGTCGTAG+AGG | + | chr6.1:66980249-66980268 | None:intergenic | 40.0% | |
| ATTCATGTAGATGCTGCTAG+TGG | - | chr6.1:66982407-66982426 | MS.gene069679:intron | 40.0% | |
| ATTGTGGTTGTGATCGAGAT+AGG | - | chr6.1:66979768-66979787 | MS.gene069679:CDS | 40.0% | |
| CACAGAGGATTACTATGTCA+TGG | - | chr6.1:66982235-66982254 | MS.gene069679:intron | 40.0% | |
| CTAAATCTGACGATGGTCTA+CGG | - | chr6.1:66980076-66980095 | MS.gene069679:intron | 40.0% | |
| CTAGCAGCATCTACATGAAT+CGG | + | chr6.1:66982407-66982426 | None:intergenic | 40.0% | |
| CTCAAATAAACCAGTCCAAG+CGG | + | chr6.1:66981890-66981909 | None:intergenic | 40.0% | |
| GAAATTGGGTCTCTCTACTA+CGG | + | chr6.1:66980277-66980296 | None:intergenic | 40.0% | |
| GAGAGGTCTAATGTTCTGTT+TGG | + | chr6.1:66982127-66982146 | None:intergenic | 40.0% | |
| GAGTATGTTTGGATAAGTGG+TGG | - | chr6.1:66981127-66981146 | MS.gene069679:intron | 40.0% | |
| GCTTTATGATTCACATTGCC+TGG | - | chr6.1:66981781-66981800 | MS.gene069679:intron | 40.0% | |
| GGAAATCCCATAGAAGATCA+GGG | + | chr6.1:66982457-66982476 | None:intergenic | 40.0% | |
| TAAACAAACCTGAAGCTCAG+TGG | + | chr6.1:66979717-66979736 | None:intergenic | 40.0% | |
| TACGATTCTCTGCAATATCG+AGG | + | chr6.1:66979796-66979815 | None:intergenic | 40.0% | |
| TAGAAAAGTTGCTCCCTATG+TGG | - | chr6.1:66981414-66981433 | MS.gene069679:intron | 40.0% | |
| TCTCTACCCTGATCTTCTAT+GGG | - | chr6.1:66982448-66982467 | MS.gene069679:intron | 40.0% | |
| TCTCTCTCTAAATCTGACGA+TGG | - | chr6.1:66980069-66980088 | MS.gene069679:intron | 40.0% | |
| TGCCAATCCAAACATGCTTT+GGG | - | chr6.1:66981247-66981266 | MS.gene069679:intron | 40.0% | |
| TGCTTTGTATTTCCTTCGAC+AGG | - | chr6.1:66982773-66982792 | MS.gene069679:intron | 40.0% | |
| TGGAAAACCAAGGCTTAACT+TGG | - | chr6.1:66979595-66979614 | MS.gene069679:CDS | 40.0% | |
| TTAGCTCCGGTAACTATGTT+AGG | + | chr6.1:66981007-66981026 | None:intergenic | 40.0% | |
| TTCTCTACCCTGATCTTCTA+TGG | - | chr6.1:66982447-66982466 | MS.gene069679:intron | 40.0% | |
| TTGATTCTACAATGCTAGGC+TGG | + | chr6.1:66981809-66981828 | None:intergenic | 40.0% | |
| ! | GCGATTGATGTGTCGTATTT+TGG | - | chr6.1:66981846-66981865 | MS.gene069679:CDS | 40.0% |
| ! | TACTTTTCACCAACGGCAAA+CGG | + | chr6.1:66982478-66982497 | None:intergenic | 40.0% |
| ! | TCCACCCGTATTTTCTCAAA+TGG | + | chr6.1:66983218-66983237 | None:intergenic | 40.0% |
| ! | TTTGGAAGCACACATACGAA+CGG | + | chr6.1:66981378-66981397 | None:intergenic | 40.0% |
| !! | ATCTGTGTTGCAGCCATTTT+GGG | - | chr6.1:66982296-66982315 | MS.gene069679:intron | 40.0% |
| !! | ATGGTCTCGTTTTGTTCATC+TGG | + | chr6.1:66979370-66979389 | None:intergenic | 40.0% |
| !! | ATGTAGTGGATGAGTGTAGT+AGG | + | chr6.1:66981662-66981681 | None:intergenic | 40.0% |
| !! | GATCATCTGTGTTTGGTGTT+TGG | - | chr6.1:66980672-66980691 | MS.gene069679:intron | 40.0% |
| !! | TGGTGGGTTTGATATAACCA+CGG | - | chr6.1:66981144-66981163 | MS.gene069679:intron | 40.0% |
| !! | TGTTTACCCTGGTATTGGTT+GGG | - | chr6.1:66982526-66982545 | MS.gene069679:intron | 40.0% |
| !! | TTGTTTACCCTGGTATTGGT+TGG | - | chr6.1:66982525-66982544 | MS.gene069679:intron | 40.0% |
| AAGCTACCATGGAGAGCTTA+TGG | + | chr6.1:66981976-66981995 | None:intergenic | 45.0% | |
| AGACTCACGGTGAGATTCTT+AGG | - | chr6.1:66983460-66983479 | MS.gene069679:CDS | 45.0% | |
| AGTTCCTCCCAAAGCATGTT+TGG | + | chr6.1:66981257-66981276 | None:intergenic | 45.0% | |
| ATCAACCTGCACATTAGCTC+CGG | + | chr6.1:66981020-66981039 | None:intergenic | 45.0% | |
| CAAAATGGCTGCAACACAGA+TGG | + | chr6.1:66982297-66982316 | None:intergenic | 45.0% | |
| CAAACAACCCAACCAATACC+AGG | + | chr6.1:66982536-66982555 | None:intergenic | 45.0% | |
| CAATAGCAGGTCTGAACCAA+AGG | - | chr6.1:66981459-66981478 | MS.gene069679:intron | 45.0% | |
| CAATGCTCCTATTGGTGAAC+AGG | - | chr6.1:66980865-66980884 | MS.gene069679:intron | 45.0% | |
| CCTGATTCTGACAAACCTAC+GGG | - | chr6.1:66979913-66979932 | MS.gene069679:intron | 45.0% | |
| CGAAGCCAAGCCGTATAAAT+TGG | + | chr6.1:66982826-66982845 | None:intergenic | 45.0% | |
| CGGAAATCCCATAGAAGATC+AGG | + | chr6.1:66982458-66982477 | None:intergenic | 45.0% | |
| CTCCCAAAGCATGTTTGGAT+TGG | + | chr6.1:66981252-66981271 | None:intergenic | 45.0% | |
| CTGATTCTGACAAACCTACG+GGG | - | chr6.1:66979914-66979933 | MS.gene069679:intron | 45.0% | |
| CTGCCAATCCAAACATGCTT+TGG | - | chr6.1:66981246-66981265 | MS.gene069679:intron | 45.0% | |
| GCAGTTTCCTGTTCACCAAT+AGG | + | chr6.1:66980875-66980894 | None:intergenic | 45.0% | |
| GGCGAACACAAGAATTCTGA+AGG | - | chr6.1:66983080-66983099 | MS.gene069679:intron | 45.0% | |
| GTAGGTTTGTCAGAATCAGG+TGG | + | chr6.1:66979913-66979932 | None:intergenic | 45.0% | |
| GTCATCAGAGGCAATAATGC+TGG | - | chr6.1:66980916-66980935 | MS.gene069679:intron | 45.0% | |
| TTCAGAGAGAAGGCTACAAG+TGG | + | chr6.1:66983159-66983178 | None:intergenic | 45.0% | |
| TTCTAGATACGTGCGTGAAC+AGG | - | chr6.1:66979405-66979424 | MS.gene069679:CDS | 45.0% | |
| ! | AGAAGCGAAAGTGCATGCTA+TGG | + | chr6.1:66979389-66979408 | None:intergenic | 45.0% |
| ! | ATTTATACGGCTTGGCTTCG+AGG | - | chr6.1:66982826-66982845 | MS.gene069679:intron | 45.0% |
| ! | ATTTGACTCGATCCTGTCGA+AGG | + | chr6.1:66982788-66982807 | None:intergenic | 45.0% |
| ! | CAATCCAAACATGCTTTGGG+AGG | - | chr6.1:66981250-66981269 | MS.gene069679:intron | 45.0% |
| ! | CATCTGTGTTGCAGCCATTT+TGG | - | chr6.1:66982295-66982314 | MS.gene069679:intron | 45.0% |
| !! | AAGTACGGTCTTGTTTACCC+TGG | - | chr6.1:66982515-66982534 | MS.gene069679:intron | 45.0% |
| !! | CAGTAGGTGTTGGAACTGTA+GGG | - | chr6.1:66980894-66980913 | MS.gene069679:intron | 45.0% |
| !! | CTGGTATTGGTTGGGTTGTT+TGG | - | chr6.1:66982534-66982553 | MS.gene069679:intron | 45.0% |
| !! | CTTTTGATCAAAGGCGTGTG+CGG | + | chr6.1:66981622-66981641 | None:intergenic | 45.0% |
| !! | GGTCTTGTTTACCCTGGTAT+TGG | - | chr6.1:66982521-66982540 | MS.gene069679:intron | 45.0% |
| !! | GTATTGGTTGGGTTGTTTGG+AGG | - | chr6.1:66982537-66982556 | MS.gene069679:intron | 45.0% |
| !!! | ATTTTGGGGCCTTTTCCCTT+AGG | - | chr6.1:66981862-66981881 | MS.gene069679:CDS | 45.0% |
| !!! | ATTTTGGGTTCAACGCTGAC+CGG | - | chr6.1:66982311-66982330 | MS.gene069679:intron | 45.0% |
| !!! | TAAAATTATAAGTTATTTTA+TGG | - | chr6.1:66980004-66980023 | MS.gene069679:intron | 5.0% |
| AAGCCGAAGGCCTAAAGCAA+GGG | + | chr6.1:66981499-66981518 | None:intergenic | 50.0% | |
| AAGTGGCACACCTATGTCCT+TGG | + | chr6.1:66983142-66983161 | None:intergenic | 50.0% | |
| AGTTACCGGAGCTAATGTGC+AGG | - | chr6.1:66981012-66981031 | MS.gene069679:intron | 50.0% | |
| ATGGGATTTCCGTTTGCCGT+TGG | - | chr6.1:66982466-66982485 | MS.gene069679:intron | 50.0% | |
| CAGGAAACTGCAGTAGGTGT+TGG | - | chr6.1:66980884-66980903 | MS.gene069679:intron | 50.0% | |
| CATGTAGATGCTGCTAGTGG+CGG | - | chr6.1:66982410-66982429 | MS.gene069679:intron | 50.0% | |
| CCCGTAGGTTTGTCAGAATC+AGG | + | chr6.1:66979916-66979935 | None:intergenic | 50.0% | |
| CTTCACATCCTCGAACTCTC+CGG | + | chr6.1:66982333-66982352 | None:intergenic | 50.0% | |
| CTTGTGGATGGCAAGAGAGT+TGG | - | chr6.1:66983495-66983514 | MS.gene069679:CDS | 50.0% | |
| GCAGGTCTGAACCAAAGGTA+AGG | - | chr6.1:66981464-66981483 | MS.gene069679:intron | 50.0% | |
| GCTAGACAAGCCCTTGCTTT+AGG | - | chr6.1:66981486-66981505 | MS.gene069679:intron | 50.0% | |
| GCTGCTGTCTTTCAGAGAGA+AGG | + | chr6.1:66983169-66983188 | None:intergenic | 50.0% | |
| GCTTATGAAGCATGGACACC+GGG | - | chr6.1:66981515-66981534 | MS.gene069679:intron | 50.0% | |
| GGAAGATTTCAGCTGCAGCT+TGG | - | chr6.1:66983302-66983321 | MS.gene069679:CDS | 50.0% | |
| GGCTTATGAAGCATGGACAC+CGG | - | chr6.1:66981514-66981533 | MS.gene069679:intron | 50.0% | |
| GGTGAACAGGAAACTGCAGT+AGG | - | chr6.1:66980878-66980897 | MS.gene069679:intron | 50.0% | |
| GTCCATGCTTCATAAGCCGA+AGG | + | chr6.1:66981512-66981531 | None:intergenic | 50.0% | |
| TAAGCCGAAGGCCTAAAGCA+AGG | + | chr6.1:66981500-66981519 | None:intergenic | 50.0% | |
| TATCGCGAGTGAGACAAGCA+AGG | - | chr6.1:66983416-66983435 | MS.gene069679:intron | 50.0% | |
| TCAGAGGCAATAATGCTGGC+TGG | - | chr6.1:66980920-66980939 | MS.gene069679:intron | 50.0% | |
| TGGAACTGTAGGGTCATCAG+AGG | - | chr6.1:66980904-66980923 | MS.gene069679:intron | 50.0% | |
| TGTCCTCCGAGTGGTGATTA+GGG | - | chr6.1:66983281-66983300 | MS.gene069679:CDS | 50.0% | |
| ! | AAGCCCTTGCTTTAGGCCTT+CGG | - | chr6.1:66981493-66981512 | MS.gene069679:intron | 50.0% |
| ! | GGTCAGCGTTGAACCCAAAA+TGG | + | chr6.1:66982312-66982331 | None:intergenic | 50.0% |
| !! | GAGGCATAAAGCTGACTTGC+CGG | - | chr6.1:66982556-66982575 | MS.gene069679:intron | 50.0% |
| !! | GCAGTAGGTGTTGGAACTGT+AGG | - | chr6.1:66980893-66980912 | MS.gene069679:intron | 50.0% |
| !! | GGCTTGTCTAGCCTTACCTT+TGG | + | chr6.1:66981478-66981497 | None:intergenic | 50.0% |
| !! | TGCATGCTTGTTATCCCCGT+AGG | + | chr6.1:66979931-66979950 | None:intergenic | 50.0% |
| ACCTGAAGCTCAGTGGTGAC+AGG | + | chr6.1:66979710-66979729 | None:intergenic | 55.0% | |
| CAAGCGGAGCCTAAGGGAAA+AGG | + | chr6.1:66981874-66981893 | None:intergenic | 55.0% | |
| CTGTCCTCCGAGTGGTGATT+AGG | - | chr6.1:66983280-66983299 | MS.gene069679:CDS | 55.0% | |
| CTTCCCTAATCACCACTCGG+AGG | + | chr6.1:66983287-66983306 | None:intergenic | 55.0% | |
| GACATCGTCCATTTCGTGCC+CGG | + | chr6.1:66981536-66981555 | None:intergenic | 55.0% | |
| GGCCTTCGGCTTATGAAGCA+TGG | - | chr6.1:66981507-66981526 | MS.gene069679:intron | 55.0% | |
| GGGCACGAAATGGACGATGT+CGG | - | chr6.1:66981535-66981554 | MS.gene069679:intron | 55.0% | |
| TCCTGTCACCACTGAGCTTC+AGG | - | chr6.1:66979706-66979725 | MS.gene069679:CDS | 55.0% | |
| ! | CTTTTCCCTTAGGCTCCGCT+TGG | - | chr6.1:66981872-66981891 | MS.gene069679:CDS | 55.0% |
| ! | TACAATGCTAGGCTGGCTCC+AGG | + | chr6.1:66981802-66981821 | None:intergenic | 55.0% |
| AACGCTGACCGGAGAGTTCG+AGG | - | chr6.1:66982322-66982341 | MS.gene069679:intron | 60.0% | |
| ACACATCGCTGTCCTCCGAG+TGG | - | chr6.1:66983272-66983291 | MS.gene069679:CDS | 60.0% | |
| ACCAGTCCAAGCGGAGCCTA+AGG | + | chr6.1:66981881-66981900 | None:intergenic | 60.0% | |
| CATGGACACCGGGCACGAAA+TGG | - | chr6.1:66981525-66981544 | MS.gene069679:intron | 60.0% | |
| CCAGTCCAAGCGGAGCCTAA+GGG | + | chr6.1:66981880-66981899 | None:intergenic | 60.0% | |
| TCCGCTGGCATTGTGTAGGC+CGG | + | chr6.1:66983246-66983265 | None:intergenic | 60.0% | |
| TCCGGCCTACACAATGCCAG+CGG | - | chr6.1:66983242-66983261 | MS.gene069679:CDS | 60.0% | |
| TGCGTCCGCTGGCATTGTGT+AGG | + | chr6.1:66983250-66983269 | None:intergenic | 60.0% | |
| ! | GCGATGTGTTTTGCGTCCGC+TGG | + | chr6.1:66983261-66983280 | None:intergenic | 60.0% |
| CCCTTAGGCTCCGCTTGGAC+TGG | - | chr6.1:66981877-66981896 | MS.gene069679:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 66979340 | 66983527 | 66979340 | ID=MS.gene069679 |
| chr6.1 | mRNA | 66979340 | 66983527 | 66979340 | ID=MS.gene069679.t1;Parent=MS.gene069679 |
| chr6.1 | exon | 66983433 | 66983527 | 66983433 | ID=MS.gene069679.t1.exon1;Parent=MS.gene069679.t1 |
| chr6.1 | CDS | 66983433 | 66983527 | 66983433 | ID=cds.MS.gene069679.t1;Parent=MS.gene069679.t1 |
| chr6.1 | exon | 66983140 | 66983344 | 66983140 | ID=MS.gene069679.t1.exon2;Parent=MS.gene069679.t1 |
| chr6.1 | CDS | 66983140 | 66983344 | 66983140 | ID=cds.MS.gene069679.t1;Parent=MS.gene069679.t1 |
| chr6.1 | exon | 66981834 | 66982034 | 66981834 | ID=MS.gene069679.t1.exon3;Parent=MS.gene069679.t1 |
| chr6.1 | CDS | 66981834 | 66982034 | 66981834 | ID=cds.MS.gene069679.t1;Parent=MS.gene069679.t1 |
| chr6.1 | exon | 66980220 | 66980688 | 66980220 | ID=MS.gene069679.t1.exon4;Parent=MS.gene069679.t1 |
| chr6.1 | CDS | 66980220 | 66980688 | 66980220 | ID=cds.MS.gene069679.t1;Parent=MS.gene069679.t1 |
| chr6.1 | exon | 66980020 | 66980072 | 66980020 | ID=MS.gene069679.t1.exon5;Parent=MS.gene069679.t1 |
| chr6.1 | CDS | 66980020 | 66980072 | 66980020 | ID=cds.MS.gene069679.t1;Parent=MS.gene069679.t1 |
| chr6.1 | exon | 66979340 | 66979816 | 66979340 | ID=MS.gene069679.t1.exon6;Parent=MS.gene069679.t1 |
| chr6.1 | CDS | 66979340 | 66979816 | 66979340 | ID=cds.MS.gene069679.t1;Parent=MS.gene069679.t1 |
| Gene Sequence |
| Protein sequence |
