Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070790.t1 | XP_003622190.1 | 97.8 | 548 | 11 | 1 | 1 | 548 | 1 | 547 | 2.3e-310 | 1074.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070790.t1 | Q9ZS97 | 77.1 | 558 | 117 | 4 | 1 | 548 | 1 | 557 | 1.2e-249 | 863.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070790.t1 | G7L3A8 | 97.8 | 548 | 11 | 1 | 1 | 548 | 1 | 547 | 1.6e-310 | 1074.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene070790 | 0.859084 | 5.28E-63 | -1.69E-46 |
| MS.gene049151 | MS.gene070790 | 0.827621 | 1.41E-54 | -1.69E-46 |
| MS.gene049153 | MS.gene070790 | 0.856842 | 2.45E-62 | -1.69E-46 |
| MS.gene049356 | MS.gene070790 | 0.882387 | 1.09E-70 | -1.69E-46 |
| MS.gene049369 | MS.gene070790 | 0.823747 | 1.17E-53 | -1.69E-46 |
| MS.gene049488 | MS.gene070790 | 0.814838 | 1.26E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene070790 | 0.818306 | 2.10E-52 | -1.69E-46 |
| MS.gene049910 | MS.gene070790 | 0.817234 | 3.67E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene070790 | 0.83572 | 1.42E-56 | -1.69E-46 |
| MS.gene050128 | MS.gene070790 | 0.848802 | 4.86E-60 | -1.69E-46 |
| MS.gene050301 | MS.gene070790 | 0.835682 | 1.46E-56 | -1.69E-46 |
| MS.gene050426 | MS.gene070790 | -0.832075 | 1.16E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene070790 | 0.838168 | 3.38E-57 | -1.69E-46 |
| MS.gene050971 | MS.gene070790 | 0.821735 | 3.45E-53 | -1.69E-46 |
| MS.gene051360 | MS.gene070790 | 0.804345 | 2.26E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene070790 | 0.806138 | 9.51E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene070790 | 0.81532 | 9.82E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene070790 | 0.83202 | 1.20E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene070790 | -0.800447 | 1.44E-48 | -1.69E-46 |
| MS.gene052077 | MS.gene070790 | 0.843659 | 1.22E-58 | -1.69E-46 |
| MS.gene052188 | MS.gene070790 | 0.906577 | 1.28E-80 | -1.69E-46 |
| MS.gene052253 | MS.gene070790 | 0.841709 | 4.03E-58 | -1.69E-46 |
| MS.gene052310 | MS.gene070790 | 0.816111 | 6.54E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene070790 | 0.883318 | 4.97E-71 | -1.69E-46 |
| MS.gene052414 | MS.gene070790 | 0.80237 | 5.80E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene070790 | 0.832401 | 9.65E-56 | -1.69E-46 |
| MS.gene053073 | MS.gene070790 | 0.834128 | 3.58E-56 | -1.69E-46 |
| MS.gene05316 | MS.gene070790 | 0.903366 | 3.74E-79 | -1.69E-46 |
| MS.gene053449 | MS.gene070790 | 0.800763 | 1.24E-48 | -1.69E-46 |
| MS.gene053494 | MS.gene070790 | 0.839693 | 1.36E-57 | -1.69E-46 |
| MS.gene053557 | MS.gene070790 | 0.829949 | 3.87E-55 | -1.69E-46 |
| MS.gene053559 | MS.gene070790 | 0.853758 | 1.93E-61 | -1.69E-46 |
| MS.gene053577 | MS.gene070790 | 0.808579 | 2.89E-50 | -1.69E-46 |
| MS.gene053758 | MS.gene070790 | 0.808194 | 3.49E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene070790 | 0.827414 | 1.59E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene070790 | 0.832251 | 1.05E-55 | -1.69E-46 |
| MS.gene053928 | MS.gene070790 | 0.823355 | 1.45E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene070790 | 0.862642 | 4.38E-64 | -1.69E-46 |
| MS.gene054183 | MS.gene070790 | 0.828648 | 8.00E-55 | -1.69E-46 |
| MS.gene054349 | MS.gene070790 | 0.846373 | 2.26E-59 | -1.69E-46 |
| MS.gene054930 | MS.gene070790 | 0.852316 | 5.00E-61 | -1.69E-46 |
| MS.gene055116 | MS.gene070790 | 0.821245 | 4.47E-53 | -1.69E-46 |
| MS.gene055422 | MS.gene070790 | 0.810099 | 1.36E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene070790 | 0.811726 | 6.06E-51 | -1.69E-46 |
| MS.gene05553 | MS.gene070790 | 0.857168 | 1.96E-62 | -1.69E-46 |
| MS.gene056233 | MS.gene070790 | 0.834339 | 3.17E-56 | -1.69E-46 |
| MS.gene056407 | MS.gene070790 | 0.80651 | 7.94E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene070790 | 0.817274 | 3.59E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene070790 | 0.809623 | 1.73E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene070790 | 0.873241 | 1.71E-67 | -1.69E-46 |
| MS.gene056719 | MS.gene070790 | 0.825685 | 4.10E-54 | -1.69E-46 |
| MS.gene056723 | MS.gene070790 | 0.851644 | 7.76E-61 | -1.69E-46 |
| MS.gene056899 | MS.gene070790 | -0.827024 | 1.97E-54 | -1.69E-46 |
| MS.gene056979 | MS.gene070790 | 0.831635 | 1.49E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene070790 | 0.80678 | 6.97E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene070790 | 0.850885 | 1.27E-60 | -1.69E-46 |
| MS.gene057199 | MS.gene070790 | 0.816519 | 5.31E-52 | -1.69E-46 |
| MS.gene05735 | MS.gene070790 | 0.808736 | 2.67E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene070790 | 0.889627 | 2.05E-73 | -1.69E-46 |
| MS.gene057448 | MS.gene070790 | 0.871519 | 6.43E-67 | -1.69E-46 |
| MS.gene057449 | MS.gene070790 | 0.873093 | 1.92E-67 | -1.69E-46 |
| MS.gene057450 | MS.gene070790 | 0.870556 | 1.33E-66 | -1.69E-46 |
| MS.gene057537 | MS.gene070790 | 0.867975 | 9.21E-66 | -1.69E-46 |
| MS.gene057749 | MS.gene070790 | 0.821043 | 4.98E-53 | -1.69E-46 |
| MS.gene057750 | MS.gene070790 | 0.800354 | 1.50E-48 | -1.69E-46 |
| MS.gene057823 | MS.gene070790 | 0.82375 | 1.17E-53 | -1.69E-46 |
| MS.gene057927 | MS.gene070790 | 0.814315 | 1.64E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene070790 | 0.837683 | 4.50E-57 | -1.69E-46 |
| MS.gene058007 | MS.gene070790 | 0.825889 | 3.66E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene070790 | 0.80297 | 4.36E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene070790 | 0.838818 | 2.29E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene070790 | 0.836237 | 1.05E-56 | -1.69E-46 |
| MS.gene05842 | MS.gene070790 | 0.804744 | 1.86E-49 | -1.69E-46 |
| MS.gene058435 | MS.gene070790 | 0.83391 | 4.06E-56 | -1.69E-46 |
| MS.gene058710 | MS.gene070790 | 0.81699 | 4.16E-52 | -1.69E-46 |
| MS.gene05886 | MS.gene070790 | 0.807506 | 4.89E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene070790 | 0.87872 | 2.24E-69 | -1.69E-46 |
| MS.gene058949 | MS.gene070790 | 0.866442 | 2.84E-65 | -1.69E-46 |
| MS.gene059011 | MS.gene070790 | 0.809306 | 2.02E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene070790 | 0.829619 | 4.65E-55 | -1.69E-46 |
| MS.gene059285 | MS.gene070790 | 0.876741 | 1.10E-68 | -1.69E-46 |
| MS.gene059366 | MS.gene070790 | 0.852832 | 3.56E-61 | -1.69E-46 |
| MS.gene059420 | MS.gene070790 | 0.858549 | 7.63E-63 | -1.69E-46 |
| MS.gene059462 | MS.gene070790 | 0.807437 | 5.06E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene070790 | 0.847465 | 1.14E-59 | -1.69E-46 |
| MS.gene05959 | MS.gene070790 | 0.830787 | 2.41E-55 | -1.69E-46 |
| MS.gene059676 | MS.gene070790 | 0.832706 | 8.11E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene070790 | 0.837494 | 5.03E-57 | -1.69E-46 |
| MS.gene059692 | MS.gene070790 | 0.829238 | 5.76E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene070790 | 0.824841 | 6.48E-54 | -1.69E-46 |
| MS.gene059708 | MS.gene070790 | 0.818494 | 1.90E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene070790 | 0.82182 | 3.30E-53 | -1.69E-46 |
| MS.gene059807 | MS.gene070790 | 0.861107 | 1.29E-63 | -1.69E-46 |
| MS.gene05984 | MS.gene070790 | 0.840899 | 6.59E-58 | -1.69E-46 |
| MS.gene059894 | MS.gene070790 | 0.841908 | 3.57E-58 | -1.69E-46 |
| MS.gene059899 | MS.gene070790 | 0.815383 | 9.51E-52 | -1.69E-46 |
| MS.gene059946 | MS.gene070790 | 0.819869 | 9.26E-53 | -1.69E-46 |
| MS.gene060247 | MS.gene070790 | 0.850155 | 2.04E-60 | -1.69E-46 |
| MS.gene060407 | MS.gene070790 | 0.826562 | 2.53E-54 | -1.69E-46 |
| MS.gene060495 | MS.gene070790 | 0.87751 | 5.93E-69 | -1.69E-46 |
| MS.gene060496 | MS.gene070790 | 0.824231 | 9.03E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene070790 | 0.856682 | 2.73E-62 | -1.69E-46 |
| MS.gene061051 | MS.gene070790 | -0.861636 | 8.93E-64 | -1.69E-46 |
| MS.gene061159 | MS.gene070790 | 0.875056 | 4.16E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070790.t1 | MTR_7g038720 | 97.993 | 548 | 10 | 1 | 1 | 548 | 1 | 547 | 0.0 | 1118 |
| MS.gene070790.t1 | MTR_7g030030 | 97.993 | 548 | 10 | 1 | 1 | 548 | 1 | 547 | 0.0 | 1118 |
| MS.gene070790.t1 | MTR_8g019500 | 95.281 | 551 | 18 | 5 | 1 | 548 | 1 | 546 | 0.0 | 1075 |
| MS.gene070790.t1 | MTR_5g014290 | 24.920 | 313 | 203 | 9 | 245 | 539 | 171 | 469 | 6.41e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070790.t1 | AT4G04770 | 76.418 | 564 | 110 | 5 | 1 | 548 | 1 | 557 | 0.0 | 898 |
| MS.gene070790.t1 | AT5G44316 | 58.123 | 554 | 142 | 9 | 1 | 548 | 1 | 470 | 0.0 | 616 |
| MS.gene070790.t1 | AT1G32500 | 24.923 | 325 | 222 | 6 | 215 | 529 | 148 | 460 | 2.98e-19 | 91.3 |
Find 117 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACTGATCTTCACCAATTT+TGG | 0.088841 | 7.3:-60751060 | None:intergenic |
| AATGAGCTTCCCGATGAATT+TGG | 0.191847 | 7.3:+60751161 | MS.gene070790:CDS |
| GATTTGGTTAGGAATTATTT+AGG | 0.202220 | 7.3:+60749135 | MS.gene070790:CDS |
| CAGTGTGATTCCATGCTTAT+TGG | 0.219953 | 7.3:+60749816 | MS.gene070790:CDS |
| TAGGAGTATGGTGGAGTATT+TGG | 0.220424 | 7.3:+60749335 | MS.gene070790:CDS |
| TTAATCGAGGGTTTCTTCTT+AGG | 0.225416 | 7.3:-60748913 | None:intergenic |
| GTTTCTGTTGATAATCCTTT+TGG | 0.244130 | 7.3:-60748736 | None:intergenic |
| AAACGATTCTGTTCGTTTAA+CGG | 0.286876 | 7.3:-60748991 | None:intergenic |
| GGATAACGGTGATTTGTGTT+TGG | 0.304767 | 7.3:-60748563 | None:intergenic |
| GATAACGGTGATTTGTGTTT+GGG | 0.306425 | 7.3:-60748562 | None:intergenic |
| CGCGATTACGACAAGAAATT+CGG | 0.317548 | 7.3:+60748682 | MS.gene070790:CDS |
| AAATAATTCCTAACCAAATC+TGG | 0.322490 | 7.3:-60749132 | None:intergenic |
| TATCTGTTATCTGACCAATT+TGG | 0.324912 | 7.3:-60748850 | None:intergenic |
| GCTTGTTCAGGTTCAGTCTA+AGG | 0.336826 | 7.3:+60749770 | MS.gene070790:CDS |
| AGATTGGGAAGTGGGTTTGA+TGG | 0.355909 | 7.3:-60748531 | None:intergenic |
| CTGTTATAGAGGGCTTGTTC+AGG | 0.372714 | 7.3:+60749758 | MS.gene070790:CDS |
| ATTTGGTTAGGAATTATTTA+GGG | 0.377879 | 7.3:+60749136 | MS.gene070790:CDS |
| CGTTGATTGTGGCGGATGAT+AGG | 0.379139 | 7.3:+60749316 | MS.gene070790:CDS |
| GAAGTATCCGAGCGTTGTTT+TGG | 0.379206 | 7.3:+60749587 | MS.gene070790:CDS |
| TTTCTATTGCAACTACTCAT+AGG | 0.386827 | 7.3:+60749049 | MS.gene070790:CDS |
| TTCGATTTCGGATGCTGTTA+AGG | 0.387550 | 7.3:+60749104 | MS.gene070790:CDS |
| AGTATTCGACTGTGCAGAAT+TGG | 0.387705 | 7.3:+60749442 | MS.gene070790:CDS |
| TGTTAAGGAGTATCCAGATT+TGG | 0.388881 | 7.3:+60749119 | MS.gene070790:CDS |
| CCCTAAAATCCGAACCTGAT+TGG | 0.389746 | 7.3:+60748776 | MS.gene070790:CDS |
| GAGGCTAGTACGTCCAAAAT+TGG | 0.390303 | 7.3:+60751047 | MS.gene070790:CDS |
| TCTTGTCGTAATCGCGGTTA+CGG | 0.398938 | 7.3:-60748675 | None:intergenic |
| AGGATTAATGCGTTGGAGAC+GGG | 0.399896 | 7.3:+60749279 | MS.gene070790:CDS |
| GTTGAGTTGTATTGTGGGGA+GGG | 0.400958 | 7.3:+60749408 | MS.gene070790:CDS |
| AGGAGTATCCAGATTTGGTT+AGG | 0.403665 | 7.3:+60749124 | MS.gene070790:CDS |
| CGAAAATGAAAGAACCAAAT+TGG | 0.408334 | 7.3:+60748836 | MS.gene070790:CDS |
| TCGTGGACTCAGGTGGAGAC+TGG | 0.409146 | 7.3:+60749549 | MS.gene070790:CDS |
| TTGAGTGGGTTGTGGATGTA+AGG | 0.416950 | 7.3:-60748482 | None:intergenic |
| AAGCTGGTTTGAGTGGGTTG+TGG | 0.422237 | 7.3:-60748490 | None:intergenic |
| CTCATGAGCTTGAAGCTTGA+GGG | 0.426381 | 7.3:+60751200 | MS.gene070790:CDS |
| GCAATGGCTGCTATGATCTC+TGG | 0.432036 | 7.3:+60751119 | MS.gene070790:CDS |
| TAATTATCAACAGGCTGATA+CGG | 0.438638 | 7.3:+60749656 | MS.gene070790:CDS |
| CGAAAATTGAGCATCCAATC+AGG | 0.439256 | 7.3:-60748790 | None:intergenic |
| AGACTGGGTCCGCGATTACT+TGG | 0.440480 | 7.3:+60749565 | MS.gene070790:CDS |
| ATATCTTGAAAATCTATAGT+TGG | 0.442228 | 7.3:-60748874 | None:intergenic |
| TCGTGCTCAATTCTTGCTGA+TGG | 0.448471 | 7.3:-60751026 | None:intergenic |
| TTTGACGAATAATTATCAAC+AGG | 0.459812 | 7.3:+60749647 | MS.gene070790:CDS |
| GTATTTCTGCTGGACATTCA+AGG | 0.462786 | 7.3:+60749733 | MS.gene070790:CDS |
| ATTGAGCATCCAATCAGGTT+CGG | 0.471647 | 7.3:-60748785 | None:intergenic |
| ATATCGAAGGGTATTTCTGC+TGG | 0.472937 | 7.3:+60749723 | MS.gene070790:CDS |
| TATCTTGAAAATCTATAGTT+GGG | 0.473477 | 7.3:-60748873 | None:intergenic |
| CGGTTGTTGAGTTGTATTGT+GGG | 0.475492 | 7.3:+60749403 | MS.gene070790:CDS |
| TGGTATGCGGGTGATGAGAA+TGG | 0.481158 | 7.3:+60749462 | MS.gene070790:CDS |
| TGTGGCGGATGATAGGAGTA+TGG | 0.485495 | 7.3:+60749323 | MS.gene070790:CDS |
| ATCGGACACTTAACACCCTT+CGG | 0.492822 | 7.3:-60749237 | None:intergenic |
| ACCTCGGAGCCAAATTCATC+GGG | 0.494987 | 7.3:-60751170 | None:intergenic |
| GGGACTAAGATGATACATAA+AGG | 0.495409 | 7.3:+60749678 | MS.gene070790:CDS |
| CGCGGTTACGGAGAATTTCA+CGG | 0.497813 | 7.3:-60748663 | None:intergenic |
| CATTCAAGGAACTGTTATAG+AGG | 0.498044 | 7.3:+60749747 | MS.gene070790:CDS |
| GATTCTTTCACAATTCCAAA+AGG | 0.499044 | 7.3:+60748721 | MS.gene070790:CDS |
| TTGTCATCGGTAGATGAAGT+TGG | 0.506952 | 7.3:-60748637 | None:intergenic |
| AATTATCAACAGGCTGATAC+GGG | 0.507180 | 7.3:+60749657 | MS.gene070790:CDS |
| GGTGATGAGAATGGGAAAGG+TGG | 0.510158 | 7.3:+60749471 | MS.gene070790:CDS |
| TGTTGAGTTGTATTGTGGGG+AGG | 0.511336 | 7.3:+60749407 | MS.gene070790:CDS |
| TCGAAGTATCTCAAAAGCTC+AGG | 0.512282 | 7.3:-60748955 | None:intergenic |
| TTGAGATACTTCGATAAGCT+CGG | 0.521652 | 7.3:+60748964 | MS.gene070790:CDS |
| TAGGATTAATGCGTTGGAGA+CGG | 0.522422 | 7.3:+60749278 | MS.gene070790:CDS |
| GCTCATGAGCTTGAAGCTTG+AGG | 0.522434 | 7.3:+60751199 | MS.gene070790:CDS |
| TAACGGTGATTTGTGTTTGG+GGG | 0.522817 | 7.3:-60748560 | None:intergenic |
| TTTGAGAAGCTGGTTTGAGT+GGG | 0.526103 | 7.3:-60748496 | None:intergenic |
| CGTGGACTCAGGTGGAGACT+GGG | 0.526944 | 7.3:+60749550 | MS.gene070790:CDS |
| CACCTCGGAGCCAAATTCAT+CGG | 0.533895 | 7.3:-60751171 | None:intergenic |
| TAGGGCTGAGATTAAACGAA+TGG | 0.540218 | 7.3:-60748758 | None:intergenic |
| ATTTGAGAGGACGTTGATTG+TGG | 0.541228 | 7.3:+60749305 | MS.gene070790:CDS |
| TTCTTCTAAGCTATTAATCG+AGG | 0.547950 | 7.3:-60748926 | None:intergenic |
| GTGATGAGAATGGGAAAGGT+GGG | 0.548593 | 7.3:+60749472 | MS.gene070790:CDS |
| GGATTAATGCGTTGGAGACG+GGG | 0.554424 | 7.3:+60749280 | MS.gene070790:CDS |
| GGTATGCGGGTGATGAGAAT+GGG | 0.557534 | 7.3:+60749463 | MS.gene070790:CDS |
| TTGGAGGGTGATGAGAGTGT+TGG | 0.558769 | 7.3:+60749606 | MS.gene070790:CDS |
| CAAGCTTCAAGCTCATGAGC+TGG | 0.559865 | 7.3:-60751196 | None:intergenic |
| AGGAAGACACTTGAGAAGGC+TGG | 0.560350 | 7.3:+60749069 | MS.gene070790:CDS |
| TCACCCTCCAAAACAACGCT+CGG | 0.561244 | 7.3:-60749594 | None:intergenic |
| TCCATGGCTTCTCTTCTCAA+CGG | 0.561678 | 7.3:+60748445 | None:intergenic |
| AAAGAGTAGGATAATATCGA+AGG | 0.564748 | 7.3:+60749710 | MS.gene070790:CDS |
| GCGGTTGTTGAGTTGTATTG+TGG | 0.564872 | 7.3:+60749402 | MS.gene070790:CDS |
| GCCGTTGAGAAGAGAAGCCA+TGG | 0.565553 | 7.3:-60748446 | None:intergenic |
| ATAACGGTGATTTGTGTTTG+GGG | 0.566138 | 7.3:-60748561 | None:intergenic |
| CGCATTAATCCTAAAATACG+TGG | 0.567141 | 7.3:-60749268 | None:intergenic |
| TCTTCTAAGCTATTAATCGA+GGG | 0.569205 | 7.3:-60748925 | None:intergenic |
| GTCGAAGATATCGTGGACTC+AGG | 0.570802 | 7.3:+60749539 | MS.gene070790:CDS |
| AAGGAAAGAATACAAAGAGT+AGG | 0.571457 | 7.3:+60749697 | MS.gene070790:CDS |
| TGGAGACGGGGCAATTTGAG+AGG | 0.580773 | 7.3:+60749292 | MS.gene070790:CDS |
| GCGGGTGATGAGAATGGGAA+AGG | 0.581778 | 7.3:+60749468 | MS.gene070790:CDS |
| GAATACATATCCTTACATCC+AGG | 0.591093 | 7.3:+60749854 | MS.gene070790:CDS |
| AGTATGGTGGAGTATTTGGA+AGG | 0.598035 | 7.3:+60749339 | MS.gene070790:CDS |
| ATTCAAGGAACTGTTATAGA+GGG | 0.600696 | 7.3:+60749748 | MS.gene070790:CDS |
| TCATGAGCTTGAAGCTTGAG+GGG | 0.602914 | 7.3:+60751201 | MS.gene070790:CDS |
| TTGAAGCTTGAGGGGTCAGT+CGG | 0.603318 | 7.3:+60751209 | MS.gene070790:CDS |
| AAGAGTAGGATAATATCGAA+GGG | 0.614934 | 7.3:+60749711 | MS.gene070790:CDS |
| AAATACGTGGATATCTGCAT+CGG | 0.617924 | 7.3:-60749255 | None:intergenic |
| GAAGATATCGTGGACTCAGG+TGG | 0.621504 | 7.3:+60749542 | MS.gene070790:CDS |
| ACGAAGAGAGGATTGTGTGC+TGG | 0.622028 | 7.3:+60749510 | MS.gene070790:CDS |
| TTATTACGCTGCATTGAATG+CGG | 0.624878 | 7.3:+60749182 | MS.gene070790:CDS |
| TCCCGATGAATTTGGCTCCG+AGG | 0.627231 | 7.3:+60751169 | MS.gene070790:CDS |
| AGCACTATCACCAATAAGCA+TGG | 0.629725 | 7.3:-60749826 | None:intergenic |
| GTAAGAAGTCGAAGATATCG+TGG | 0.634199 | 7.3:+60749532 | MS.gene070790:CDS |
| CGAATTTCTTGTCGTAATCG+CGG | 0.638662 | 7.3:-60748681 | None:intergenic |
| ACTGTGCAGAATTGGTATGC+GGG | 0.639721 | 7.3:+60749450 | MS.gene070790:CDS |
| GGCGGATGATAGGAGTATGG+TGG | 0.641159 | 7.3:+60749326 | MS.gene070790:CDS |
| GTTCGTAACTAACGTCTGAA+CGG | 0.647103 | 7.3:-60748600 | None:intergenic |
| GCTCATGAGCTGGTTCACCT+CGG | 0.653360 | 7.3:-60751186 | None:intergenic |
| GCGTAATAATTATCATCACT+AGG | 0.656830 | 7.3:-60749168 | None:intergenic |
| GACTGTGCAGAATTGGTATG+CGG | 0.657058 | 7.3:+60749449 | MS.gene070790:CDS |
| TCATAGGAAGACACTTGAGA+AGG | 0.657651 | 7.3:+60749065 | MS.gene070790:CDS |
| TGTTCAGGTTCAGTCTAAGG+CGG | 0.659200 | 7.3:+60749773 | MS.gene070790:CDS |
| GAAGCTCATTGAAGACATCA+CGG | 0.661065 | 7.3:-60751148 | None:intergenic |
| GAATCGTTTAGCGAATGTTG+CGG | 0.668424 | 7.3:+60749005 | MS.gene070790:CDS |
| GTATGGTGGAGTATTTGGAA+GGG | 0.671768 | 7.3:+60749340 | MS.gene070790:CDS |
| TGAGAGGACGTTGATTGTGG+CGG | 0.679907 | 7.3:+60749308 | MS.gene070790:CDS |
| ATCAGCAAGAATTGAGCACG+AGG | 0.694946 | 7.3:+60751028 | MS.gene070790:CDS |
| CGGATACTTCCAAGTAATCG+CGG | 0.697357 | 7.3:-60749574 | None:intergenic |
| GGTTGTTGAGTTGTATTGTG+GGG | 0.708201 | 7.3:+60749404 | MS.gene070790:CDS |
| ATTATCAACAGGCTGATACG+GGG | 0.731328 | 7.3:+60749658 | MS.gene070790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAGCAATTAATTAT+GGG | + | chr7.3:60750298-60750317 | MS.gene070790:intron | 10.0% |
| !! | ATTACAAATATGGAAAAAAA+AGG | - | chr7.3:60750944-60750963 | None:intergenic | 15.0% |
| !! | GATAAAATAGCAATTAATTA+TGG | + | chr7.3:60750297-60750316 | MS.gene070790:intron | 15.0% |
| !! | TTACAAATATGGAAAAAAAA+GGG | - | chr7.3:60750943-60750962 | None:intergenic | 15.0% |
| !! | AACAAAAAAAAAAAGTTACC+TGG | - | chr7.3:60749875-60749894 | None:intergenic | 20.0% |
| !! | AATAATTAATGTCTATGGAT+CGG | + | chr7.3:60749931-60749950 | MS.gene070790:intron | 20.0% |
| !! | AGATAACGATAAGAATATAT+GGG | + | chr7.3:60749960-60749979 | MS.gene070790:intron | 20.0% |
| !! | ATATCTTGAAAATCTATAGT+TGG | - | chr7.3:60748877-60748896 | None:intergenic | 20.0% |
| !! | ATTTGGTTAGGAATTATTTA+GGG | + | chr7.3:60749136-60749155 | MS.gene070790:CDS | 20.0% |
| !! | CAAAGATTTCATCAATAATA+TGG | + | chr7.3:60750822-60750841 | MS.gene070790:intron | 20.0% |
| !! | CAGTTAATAATTAATGTCTA+TGG | + | chr7.3:60749926-60749945 | MS.gene070790:intron | 20.0% |
| !! | TAGATAACGATAAGAATATA+TGG | + | chr7.3:60749959-60749978 | MS.gene070790:intron | 20.0% |
| !! | TATCTTGAAAATCTATAGTT+GGG | - | chr7.3:60748876-60748895 | None:intergenic | 20.0% |
| !! | TCTATATTAGTATTACTTCA+AGG | - | chr7.3:60750258-60750277 | None:intergenic | 20.0% |
| !! | TGTTTAATCAAGTATGAAAA+CGG | - | chr7.3:60750659-60750678 | None:intergenic | 20.0% |
| !!! | AATTGATTCCTTAAAATTCA+AGG | - | chr7.3:60750334-60750353 | None:intergenic | 20.0% |
| !!! | TGTTATATTTTGTTCGATTT+CGG | + | chr7.3:60749092-60749111 | MS.gene070790:CDS | 20.0% |
| !!! | TTATTTTACTTTCAACAAAG+AGG | + | chr7.3:60751080-60751099 | MS.gene070790:CDS | 20.0% |
| !!! | TTGGATATATTTTCTAAGAT+TGG | + | chr7.3:60750028-60750047 | MS.gene070790:intron | 20.0% |
| ! | AAATAATTCCTAACCAAATC+TGG | - | chr7.3:60749135-60749154 | None:intergenic | 25.0% |
| ! | AATAGACTATGAAAAAGCAA+TGG | + | chr7.3:60751103-60751122 | MS.gene070790:CDS | 25.0% |
| ! | AATTATGTAACAATAGAGCA+TGG | - | chr7.3:60750109-60750128 | None:intergenic | 25.0% |
| ! | ATATCATATGCACAGAATAT+CGG | + | chr7.3:60750521-60750540 | MS.gene070790:intron | 25.0% |
| ! | CCTTAAAATTCAAGGATTAT+TGG | - | chr7.3:60750326-60750345 | None:intergenic | 25.0% |
| ! | CTATGATTTAAGAACTACAT+GGG | + | chr7.3:60750490-60750509 | MS.gene070790:intron | 25.0% |
| ! | GAAAAAAAAGGGTGAAAATA+AGG | - | chr7.3:60750932-60750951 | None:intergenic | 25.0% |
| ! | GTTTAATCAAGTATGAAAAC+GGG | - | chr7.3:60750658-60750677 | None:intergenic | 25.0% |
| ! | TTTAATCAAGTATGAAAACG+GGG | - | chr7.3:60750657-60750676 | None:intergenic | 25.0% |
| ! | TTTCATCTATAACTTGAAAC+TGG | - | chr7.3:60750234-60750253 | None:intergenic | 25.0% |
| ! | TTTGACGAATAATTATCAAC+AGG | + | chr7.3:60749647-60749666 | MS.gene070790:CDS | 25.0% |
| !! | ATTTTTATCATAAGAAGGTG+CGG | - | chr7.3:60749370-60749389 | None:intergenic | 25.0% |
| !! | CCAATAATCCTTGAATTTTA+AGG | + | chr7.3:60750323-60750342 | MS.gene070790:intron | 25.0% |
| !! | GATTTGGTTAGGAATTATTT+AGG | + | chr7.3:60749135-60749154 | MS.gene070790:CDS | 25.0% |
| !! | TATAATTTTGTTACGAAGAG+AGG | + | chr7.3:60749498-60749517 | MS.gene070790:CDS | 25.0% |
| !!! | AGCTGATTTTTATCATAAGA+AGG | - | chr7.3:60749375-60749394 | None:intergenic | 25.0% |
| !!! | ATTTTAACGGTTTTGGATAA+CGG | - | chr7.3:60748580-60748599 | None:intergenic | 25.0% |
| AAAAAAGTTACCTGGATGTA+AGG | - | chr7.3:60749867-60749886 | None:intergenic | 30.0% | |
| AAACGATTCTGTTCGTTTAA+CGG | - | chr7.3:60748994-60749013 | None:intergenic | 30.0% | |
| AAAGAGTAGGATAATATCGA+AGG | + | chr7.3:60749710-60749729 | MS.gene070790:CDS | 30.0% | |
| AAAGGGTGAAAATAAGGAAA+AGG | - | chr7.3:60750926-60750945 | None:intergenic | 30.0% | |
| AAGAGTAGGATAATATCGAA+GGG | + | chr7.3:60749711-60749730 | MS.gene070790:CDS | 30.0% | |
| AAGGAAAGAATACAAAGAGT+AGG | + | chr7.3:60749697-60749716 | MS.gene070790:CDS | 30.0% | |
| ACTAGAAATTGTTAGTATCC+TGG | + | chr7.3:60750593-60750612 | MS.gene070790:intron | 30.0% | |
| AGAATTAATCCTGATTGTGT+TGG | + | chr7.3:60750275-60750294 | MS.gene070790:intron | 30.0% | |
| ATAAGGAAAAGGAAACAAGA+TGG | - | chr7.3:60750915-60750934 | None:intergenic | 30.0% | |
| ATTCAAGGAACTGTTATAGA+GGG | + | chr7.3:60749748-60749767 | MS.gene070790:CDS | 30.0% | |
| CGAAAATGAAAGAACCAAAT+TGG | + | chr7.3:60748836-60748855 | MS.gene070790:CDS | 30.0% | |
| GATTCTTTCACAATTCCAAA+AGG | + | chr7.3:60748721-60748740 | MS.gene070790:CDS | 30.0% | |
| GCGTAATAATTATCATCACT+AGG | - | chr7.3:60749171-60749190 | None:intergenic | 30.0% | |
| GCTATGATTTAAGAACTACA+TGG | + | chr7.3:60750489-60750508 | MS.gene070790:intron | 30.0% | |
| TAATTATCAACAGGCTGATA+CGG | + | chr7.3:60749656-60749675 | MS.gene070790:CDS | 30.0% | |
| TATCTGTTATCTGACCAATT+TGG | - | chr7.3:60748853-60748872 | None:intergenic | 30.0% | |
| TCTTCTAAGCTATTAATCGA+GGG | - | chr7.3:60748928-60748947 | None:intergenic | 30.0% | |
| TTCTTCTAAGCTATTAATCG+AGG | - | chr7.3:60748929-60748948 | None:intergenic | 30.0% | |
| TTTCTATTGCAACTACTCAT+AGG | + | chr7.3:60749049-60749068 | MS.gene070790:CDS | 30.0% | |
| ! | AATTTCACGGATTTTGTCAT+CGG | - | chr7.3:60748653-60748672 | None:intergenic | 30.0% |
| ! | CTATTTTATCCAACACAATC+AGG | - | chr7.3:60750287-60750306 | None:intergenic | 30.0% |
| ! | GTTTCTGGACATTACAAATA+TGG | - | chr7.3:60750954-60750973 | None:intergenic | 30.0% |
| ! | TAACTGATCTTCACCAATTT+TGG | - | chr7.3:60751063-60751082 | None:intergenic | 30.0% |
| !! | CTAAGATTGGTTTCTCTATA+TGG | + | chr7.3:60750041-60750060 | MS.gene070790:intron | 30.0% |
| !! | TCGTTTTGTTATATACCGAA+GGG | + | chr7.3:60749222-60749241 | MS.gene070790:CDS | 30.0% |
| !! | TGAAATTGCAATTGTTTTGC+AGG | + | chr7.3:60750995-60751014 | MS.gene070790:intron | 30.0% |
| !!! | GTATTTTAGGATTAATGCGT+TGG | + | chr7.3:60749272-60749291 | MS.gene070790:CDS | 30.0% |
| !!! | GTTTCTGTTGATAATCCTTT+TGG | - | chr7.3:60748739-60748758 | None:intergenic | 30.0% |
| AAAACGGGGTGATAAAAATC+AGG | - | chr7.3:60750643-60750662 | None:intergenic | 35.0% | |
| AAATACGTGGATATCTGCAT+CGG | - | chr7.3:60749258-60749277 | None:intergenic | 35.0% | |
| AAGCAAATCCAATAAGACAC+AGG | - | chr7.3:60750147-60750166 | None:intergenic | 35.0% | |
| AATTATCAACAGGCTGATAC+GGG | + | chr7.3:60749657-60749676 | MS.gene070790:CDS | 35.0% | |
| ACAGAATATCGGTACTTCTT+CGG | + | chr7.3:60750532-60750551 | MS.gene070790:intron | 35.0% | |
| AGGTATCAAAGACCAAATGT+TGG | - | chr7.3:60750758-60750777 | None:intergenic | 35.0% | |
| AGTGGAAGATAACTCTGATA+TGG | - | chr7.3:60750888-60750907 | None:intergenic | 35.0% | |
| CATTCAAGGAACTGTTATAG+AGG | + | chr7.3:60749747-60749766 | MS.gene070790:CDS | 35.0% | |
| CGCATTAATCCTAAAATACG+TGG | - | chr7.3:60749271-60749290 | None:intergenic | 35.0% | |
| GAATACATATCCTTACATCC+AGG | + | chr7.3:60749854-60749873 | MS.gene070790:CDS | 35.0% | |
| GGGACTAAGATGATACATAA+AGG | + | chr7.3:60749678-60749697 | MS.gene070790:CDS | 35.0% | |
| GGTATCAAAGACCAAATGTT+GGG | - | chr7.3:60750757-60750776 | None:intergenic | 35.0% | |
| TAAAAATCAGCTTCATGCTG+CGG | + | chr7.3:60749383-60749402 | MS.gene070790:CDS | 35.0% | |
| TTAATCGAGGGTTTCTTCTT+AGG | - | chr7.3:60748916-60748935 | None:intergenic | 35.0% | |
| TTATTACGCTGCATTGAATG+CGG | + | chr7.3:60749182-60749201 | MS.gene070790:CDS | 35.0% | |
| TTGAGATACTTCGATAAGCT+CGG | + | chr7.3:60748964-60748983 | MS.gene070790:CDS | 35.0% | |
| TTTCATGAGTACAAGTCTCA+TGG | - | chr7.3:60750980-60750999 | None:intergenic | 35.0% | |
| ! | ACATTTGGTCTTTGATACCT+CGG | + | chr7.3:60750758-60750777 | MS.gene070790:intron | 35.0% |
| ! | ACCAAATGTTGGGATAGTTT+TGG | - | chr7.3:60750747-60750766 | None:intergenic | 35.0% |
| ! | ATAACGGTGATTTGTGTTTG+GGG | - | chr7.3:60748564-60748583 | None:intergenic | 35.0% |
| ! | GATAACGGTGATTTGTGTTT+GGG | - | chr7.3:60748565-60748584 | None:intergenic | 35.0% |
| ! | GTGTCTTTTATTCTGTTTCC+TGG | + | chr7.3:60750718-60750737 | MS.gene070790:intron | 35.0% |
| ! | TCTTTTATTCTGTTTCCTGG+TGG | + | chr7.3:60750721-60750740 | MS.gene070790:intron | 35.0% |
| ! | TGCAGATATCCACGTATTTT+AGG | + | chr7.3:60749259-60749278 | MS.gene070790:CDS | 35.0% |
| !! | AACGTCTGAACGGATTTTAA+CGG | - | chr7.3:60748593-60748612 | None:intergenic | 35.0% |
| !! | GTCGTTTTGTTATATACCGA+AGG | + | chr7.3:60749221-60749240 | MS.gene070790:CDS | 35.0% |
| !! | TGAACGGATTTTAACGGTTT+TGG | - | chr7.3:60748587-60748606 | None:intergenic | 35.0% |
| !! | TGTTAAGGAGTATCCAGATT+TGG | + | chr7.3:60749119-60749138 | MS.gene070790:CDS | 35.0% |
| !!! | AAGTGCTTTTTTTGAGAAGC+TGG | - | chr7.3:60748509-60748528 | None:intergenic | 35.0% |
| !!! | ATTGTTTTGACAACTGTGGT+GGG | + | chr7.3:60750456-60750475 | MS.gene070790:intron | 35.0% |
| !!! | GAGTGTTGGAGAGTTTTATT+CGG | + | chr7.3:60749620-60749639 | MS.gene070790:CDS | 35.0% |
| !!! | TATTGTTTTGACAACTGTGG+TGG | + | chr7.3:60750455-60750474 | MS.gene070790:intron | 35.0% |
| AATGAGCTTCCCGATGAATT+TGG | + | chr7.3:60751161-60751180 | MS.gene070790:CDS | 40.0% | |
| AGCACTATCACCAATAAGCA+TGG | - | chr7.3:60749829-60749848 | None:intergenic | 40.0% | |
| AGGAAACAAGATGGAAGTAG+TGG | - | chr7.3:60750906-60750925 | None:intergenic | 40.0% | |
| AGTATTCGACTGTGCAGAAT+TGG | + | chr7.3:60749442-60749461 | MS.gene070790:CDS | 40.0% | |
| ATCCGTGGTGTTTAGTTGAA+AGG | + | chr7.3:60750174-60750193 | MS.gene070790:intron | 40.0% | |
| ATTATCAACAGGCTGATACG+GGG | + | chr7.3:60749658-60749677 | MS.gene070790:CDS | 40.0% | |
| ATTGAGCATCCAATCAGGTT+CGG | - | chr7.3:60748788-60748807 | None:intergenic | 40.0% | |
| CAGTGTGATTCCATGCTTAT+TGG | + | chr7.3:60749816-60749835 | MS.gene070790:CDS | 40.0% | |
| CCATGAAGTATGCATGAACA+AGG | - | chr7.3:60750003-60750022 | None:intergenic | 40.0% | |
| CCTTGTTCATGCATACTTCA+TGG | + | chr7.3:60750000-60750019 | MS.gene070790:intron | 40.0% | |
| CGAAAATTGAGCATCCAATC+AGG | - | chr7.3:60748793-60748812 | None:intergenic | 40.0% | |
| CGAATTTCTTGTCGTAATCG+CGG | - | chr7.3:60748684-60748703 | None:intergenic | 40.0% | |
| CGCGATTACGACAAGAAATT+CGG | + | chr7.3:60748682-60748701 | MS.gene070790:CDS | 40.0% | |
| GAAGCTCATTGAAGACATCA+CGG | - | chr7.3:60751151-60751170 | None:intergenic | 40.0% | |
| GAATCGTTTAGCGAATGTTG+CGG | + | chr7.3:60749005-60749024 | MS.gene070790:CDS | 40.0% | |
| GCCAAAACTATCCCAACATT+TGG | + | chr7.3:60750743-60750762 | MS.gene070790:intron | 40.0% | |
| GTAAGAAGTCGAAGATATCG+TGG | + | chr7.3:60749532-60749551 | MS.gene070790:CDS | 40.0% | |
| GTTCGTAACTAACGTCTGAA+CGG | - | chr7.3:60748603-60748622 | None:intergenic | 40.0% | |
| TAGGATTAATGCGTTGGAGA+CGG | + | chr7.3:60749278-60749297 | MS.gene070790:CDS | 40.0% | |
| TAGGGCTGAGATTAAACGAA+TGG | - | chr7.3:60748761-60748780 | None:intergenic | 40.0% | |
| TCATAGGAAGACACTTGAGA+AGG | + | chr7.3:60749065-60749084 | MS.gene070790:CDS | 40.0% | |
| TCCAATAAGACACAGGTAAG+AGG | - | chr7.3:60750140-60750159 | None:intergenic | 40.0% | |
| TCCGTGGTGTTTAGTTGAAA+GGG | + | chr7.3:60750175-60750194 | MS.gene070790:intron | 40.0% | |
| TCCTCTTACCTGTGTCTTAT+TGG | + | chr7.3:60750136-60750155 | MS.gene070790:intron | 40.0% | |
| TGCATACTTCATGGACACTT+TGG | + | chr7.3:60750009-60750028 | MS.gene070790:intron | 40.0% | |
| TGGTTGCAGTCTATTGTTGT+TGG | + | chr7.3:60750790-60750809 | MS.gene070790:intron | 40.0% | |
| TTCGATTTCGGATGCTGTTA+AGG | + | chr7.3:60749104-60749123 | MS.gene070790:CDS | 40.0% | |
| TTGTCATCGGTAGATGAAGT+TGG | - | chr7.3:60748640-60748659 | None:intergenic | 40.0% | |
| ! | AGTATGGTGGAGTATTTGGA+AGG | + | chr7.3:60749339-60749358 | MS.gene070790:CDS | 40.0% |
| ! | ATTTGAGAGGACGTTGATTG+TGG | + | chr7.3:60749305-60749324 | MS.gene070790:CDS | 40.0% |
| ! | CCAATCAGGTTCGGATTTTA+GGG | - | chr7.3:60748779-60748798 | None:intergenic | 40.0% |
| ! | CGGTTGTTGAGTTGTATTGT+GGG | + | chr7.3:60749403-60749422 | MS.gene070790:CDS | 40.0% |
| ! | GAGCTTTTTGATGCTGAGTT+TGG | + | chr7.3:60750615-60750634 | MS.gene070790:intron | 40.0% |
| ! | GGATAACGGTGATTTGTGTT+TGG | - | chr7.3:60748566-60748585 | None:intergenic | 40.0% |
| ! | GGTTGTTGAGTTGTATTGTG+GGG | + | chr7.3:60749404-60749423 | MS.gene070790:CDS | 40.0% |
| ! | GTATGGTGGAGTATTTGGAA+GGG | + | chr7.3:60749340-60749359 | MS.gene070790:CDS | 40.0% |
| ! | GTATTTCTGCTGGACATTCA+AGG | + | chr7.3:60749733-60749752 | MS.gene070790:CDS | 40.0% |
| ! | TAACGGTGATTTGTGTTTGG+GGG | - | chr7.3:60748563-60748582 | None:intergenic | 40.0% |
| ! | TAGGAGTATGGTGGAGTATT+TGG | + | chr7.3:60749335-60749354 | MS.gene070790:CDS | 40.0% |
| ! | TCCAATCAGGTTCGGATTTT+AGG | - | chr7.3:60748780-60748799 | None:intergenic | 40.0% |
| ! | TCGAAGTATCTCAAAAGCTC+AGG | - | chr7.3:60748958-60748977 | None:intergenic | 40.0% |
| !! | AACTGTGGTGGGCAAATATA+CGG | + | chr7.3:60750467-60750486 | MS.gene070790:intron | 40.0% |
| !! | AGGAGTATCCAGATTTGGTT+AGG | + | chr7.3:60749124-60749143 | MS.gene070790:CDS | 40.0% |
| !! | ATATCGAAGGGTATTTCTGC+TGG | + | chr7.3:60749723-60749742 | MS.gene070790:CDS | 40.0% |
| !! | TTTGAGAAGCTGGTTTGAGT+GGG | - | chr7.3:60748499-60748518 | None:intergenic | 40.0% |
| !!! | AATGCGGCTGTTTTTAGTGA+CGG | + | chr7.3:60749198-60749217 | MS.gene070790:CDS | 40.0% |
| !!! | GGCTATTGTTTTGACAACTG+TGG | + | chr7.3:60750452-60750471 | MS.gene070790:intron | 40.0% |
| !!! | GGTTTTTGAGATTGGGAAGT+GGG | - | chr7.3:60748542-60748561 | None:intergenic | 40.0% |
| !!! | GTTTGGGGGTTTTTGAGATT+GGG | - | chr7.3:60748549-60748568 | None:intergenic | 40.0% |
| !!! | TGTTTGGGGGTTTTTGAGAT+TGG | - | chr7.3:60748550-60748569 | None:intergenic | 40.0% |
| !!! | TTTTGAGAAGCTGGTTTGAG+TGG | - | chr7.3:60748500-60748519 | None:intergenic | 40.0% |
| ACTCAGCATCAAAAAGCTCC+AGG | - | chr7.3:60750614-60750633 | None:intergenic | 45.0% | |
| ACTGTGCAGAATTGGTATGC+GGG | + | chr7.3:60749450-60749469 | MS.gene070790:CDS | 45.0% | |
| AGCACAACATGGTGAGAGAT+TGG | + | chr7.3:60750431-60750450 | MS.gene070790:intron | 45.0% | |
| AGGATTAATGCGTTGGAGAC+GGG | + | chr7.3:60749279-60749298 | MS.gene070790:CDS | 45.0% | |
| ATCAGCAAGAATTGAGCACG+AGG | + | chr7.3:60751028-60751047 | MS.gene070790:CDS | 45.0% | |
| ATCGGACACTTAACACCCTT+CGG | - | chr7.3:60749240-60749259 | None:intergenic | 45.0% | |
| ATTTGCTTGTCCTGTATCCG+TGG | + | chr7.3:60750159-60750178 | MS.gene070790:intron | 45.0% | |
| CAACTAAACACCACGGATAC+AGG | - | chr7.3:60750172-60750191 | None:intergenic | 45.0% | |
| CAAGTCTCATGGCAAGTTTC+TGG | - | chr7.3:60750969-60750988 | None:intergenic | 45.0% | |
| CACCATGTTGTGCTTGTACT+AGG | - | chr7.3:60750425-60750444 | None:intergenic | 45.0% | |
| CCCCTTTCAACTAAACACCA+CGG | - | chr7.3:60750179-60750198 | None:intergenic | 45.0% | |
| CCCTAAAATCCGAACCTGAT+TGG | + | chr7.3:60748776-60748795 | MS.gene070790:CDS | 45.0% | |
| CCGTGGTGTTTAGTTGAAAG+GGG | + | chr7.3:60750176-60750195 | MS.gene070790:intron | 45.0% | |
| CGGATACTTCCAAGTAATCG+CGG | - | chr7.3:60749577-60749596 | None:intergenic | 45.0% | |
| CTCATGAGCTTGAAGCTTGA+GGG | + | chr7.3:60751200-60751219 | MS.gene070790:CDS | 45.0% | |
| GACTGTGCAGAATTGGTATG+CGG | + | chr7.3:60749449-60749468 | MS.gene070790:CDS | 45.0% | |
| GAGGCTAGTACGTCCAAAAT+TGG | + | chr7.3:60751047-60751066 | MS.gene070790:CDS | 45.0% | |
| GTACTTCTTCGGCATACATG+TGG | + | chr7.3:60750543-60750562 | MS.gene070790:intron | 45.0% | |
| GTGATGAGAATGGGAAAGGT+GGG | + | chr7.3:60749472-60749491 | MS.gene070790:CDS | 45.0% | |
| TCATGAGCTTGAAGCTTGAG+GGG | + | chr7.3:60751201-60751220 | MS.gene070790:CDS | 45.0% | |
| TCGTGCTCAATTCTTGCTGA+TGG | - | chr7.3:60751029-60751048 | None:intergenic | 45.0% | |
| TCTTGTCGTAATCGCGGTTA+CGG | - | chr7.3:60748678-60748697 | None:intergenic | 45.0% | |
| TGCCTAGTACAAGCACAACA+TGG | + | chr7.3:60750420-60750439 | MS.gene070790:intron | 45.0% | |
| ! | AGATTGGGAAGTGGGTTTGA+TGG | - | chr7.3:60748534-60748553 | None:intergenic | 45.0% |
| ! | CATACATGTGGTCTAGTTCG+AGG | + | chr7.3:60750555-60750574 | MS.gene070790:intron | 45.0% |
| ! | CTGTTATAGAGGGCTTGTTC+AGG | + | chr7.3:60749758-60749777 | MS.gene070790:CDS | 45.0% |
| ! | GCGGTTGTTGAGTTGTATTG+TGG | + | chr7.3:60749402-60749421 | MS.gene070790:CDS | 45.0% |
| ! | GCTTGTTCAGGTTCAGTCTA+AGG | + | chr7.3:60749770-60749789 | MS.gene070790:CDS | 45.0% |
| ! | GTTGAGTTGTATTGTGGGGA+GGG | + | chr7.3:60749408-60749427 | MS.gene070790:CDS | 45.0% |
| ! | TGTTCAGGTTCAGTCTAAGG+CGG | + | chr7.3:60749773-60749792 | MS.gene070790:CDS | 45.0% |
| ! | TGTTGAGTTGTATTGTGGGG+AGG | + | chr7.3:60749407-60749426 | MS.gene070790:CDS | 45.0% |
| !! | GAAGTATCCGAGCGTTGTTT+TGG | + | chr7.3:60749587-60749606 | MS.gene070790:CDS | 45.0% |
| !! | TTGAGTGGGTTGTGGATGTA+AGG | - | chr7.3:60748485-60748504 | None:intergenic | 45.0% |
| !!! | ATGCGGCTGTTTTTAGTGAC+GGG | + | chr7.3:60749199-60749218 | MS.gene070790:CDS | 45.0% |
| !!! | GGGTTTTTGAGATTGGGAAG+TGG | - | chr7.3:60748543-60748562 | None:intergenic | 45.0% |
| !!! | TATCCGAGCGTTGTTTTGGA+GGG | + | chr7.3:60749591-60749610 | MS.gene070790:CDS | 45.0% |
| ACCTCGGAGCCAAATTCATC+GGG | - | chr7.3:60751173-60751192 | None:intergenic | 50.0% | |
| ACGAAGAGAGGATTGTGTGC+TGG | + | chr7.3:60749510-60749529 | MS.gene070790:CDS | 50.0% | |
| AGGAAGACACTTGAGAAGGC+TGG | + | chr7.3:60749069-60749088 | MS.gene070790:CDS | 50.0% | |
| CAAGCTTCAAGCTCATGAGC+TGG | - | chr7.3:60751199-60751218 | None:intergenic | 50.0% | |
| CACCTCGGAGCCAAATTCAT+CGG | - | chr7.3:60751174-60751193 | None:intergenic | 50.0% | |
| CGCGGTTACGGAGAATTTCA+CGG | - | chr7.3:60748666-60748685 | None:intergenic | 50.0% | |
| GAAGATATCGTGGACTCAGG+TGG | + | chr7.3:60749542-60749561 | MS.gene070790:CDS | 50.0% | |
| GCAATGGCTGCTATGATCTC+TGG | + | chr7.3:60751119-60751138 | MS.gene070790:CDS | 50.0% | |
| GCTCATGAGCTTGAAGCTTG+AGG | + | chr7.3:60751199-60751218 | MS.gene070790:CDS | 50.0% | |
| GGATTAATGCGTTGGAGACG+GGG | + | chr7.3:60749280-60749299 | MS.gene070790:CDS | 50.0% | |
| GGTATGCGGGTGATGAGAAT+GGG | + | chr7.3:60749463-60749482 | MS.gene070790:CDS | 50.0% | |
| GGTGATGAGAATGGGAAAGG+TGG | + | chr7.3:60749471-60749490 | MS.gene070790:CDS | 50.0% | |
| GTCGAAGATATCGTGGACTC+AGG | + | chr7.3:60749539-60749558 | MS.gene070790:CDS | 50.0% | |
| TCACCCTCCAAAACAACGCT+CGG | - | chr7.3:60749597-60749616 | None:intergenic | 50.0% | |
| TGATACCTCGGTAGCTTCAC+TGG | + | chr7.3:60750770-60750789 | MS.gene070790:intron | 50.0% | |
| TGGTATGCGGGTGATGAGAA+TGG | + | chr7.3:60749462-60749481 | MS.gene070790:CDS | 50.0% | |
| TTGAAGCTTGAGGGGTCAGT+CGG | + | chr7.3:60751209-60751228 | MS.gene070790:CDS | 50.0% | |
| ! | TGAGAGGACGTTGATTGTGG+CGG | + | chr7.3:60749308-60749327 | MS.gene070790:CDS | 50.0% |
| ! | TTGGAGGGTGATGAGAGTGT+TGG | + | chr7.3:60749606-60749625 | MS.gene070790:CDS | 50.0% |
| !! | AAGCTGGTTTGAGTGGGTTG+TGG | - | chr7.3:60748493-60748512 | None:intergenic | 50.0% |
| !! | CGTTGATTGTGGCGGATGAT+AGG | + | chr7.3:60749316-60749335 | MS.gene070790:CDS | 50.0% |
| !! | TGTGGCGGATGATAGGAGTA+TGG | + | chr7.3:60749323-60749342 | MS.gene070790:CDS | 50.0% |
| !!! | GTATCCGAGCGTTGTTTTGG+AGG | + | chr7.3:60749590-60749609 | MS.gene070790:CDS | 50.0% |
| !!! | TTGGGATAGTTTTGGCCACC+AGG | - | chr7.3:60750739-60750758 | None:intergenic | 50.0% |
| AGACTGGGTCCGCGATTACT+TGG | + | chr7.3:60749565-60749584 | MS.gene070790:CDS | 55.0% | |
| GCGGGTGATGAGAATGGGAA+AGG | + | chr7.3:60749468-60749487 | MS.gene070790:CDS | 55.0% | |
| TGCAACCAGTGAAGCTACCG+AGG | - | chr7.3:60750778-60750797 | None:intergenic | 55.0% | |
| TGGAGACGGGGCAATTTGAG+AGG | + | chr7.3:60749292-60749311 | MS.gene070790:CDS | 55.0% | |
| ! | GCTCATGAGCTGGTTCACCT+CGG | - | chr7.3:60751189-60751208 | None:intergenic | 55.0% |
| ! | GGCGGATGATAGGAGTATGG+TGG | + | chr7.3:60749326-60749345 | MS.gene070790:CDS | 55.0% |
| ! | TCCCGATGAATTTGGCTCCG+AGG | + | chr7.3:60751169-60751188 | MS.gene070790:CDS | 55.0% |
| CGTGGACTCAGGTGGAGACT+GGG | + | chr7.3:60749550-60749569 | MS.gene070790:CDS | 60.0% | |
| TCGTGGACTCAGGTGGAGAC+TGG | + | chr7.3:60749549-60749568 | MS.gene070790:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 60748448 | 60751235 | 60748448 | ID=MS.gene070790 |
| chr7.3 | mRNA | 60748448 | 60751235 | 60748448 | ID=MS.gene070790.t1;Parent=MS.gene070790 |
| chr7.3 | exon | 60748448 | 60749875 | 60748448 | ID=MS.gene070790.t1.exon1;Parent=MS.gene070790.t1 |
| chr7.3 | CDS | 60748448 | 60749875 | 60748448 | ID=cds.MS.gene070790.t1;Parent=MS.gene070790.t1 |
| chr7.3 | exon | 60751017 | 60751235 | 60751017 | ID=MS.gene070790.t1.exon2;Parent=MS.gene070790.t1 |
| chr7.3 | CDS | 60751017 | 60751235 | 60751017 | ID=cds.MS.gene070790.t1;Parent=MS.gene070790.t1 |
| Gene Sequence |
| Protein sequence |
