AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071317


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071317.t1 MTR_7g005940 95.065 1074 52 1 1 1074 1 1073 0.0 2060
MS.gene071317.t1 MTR_7g005940 94.884 1036 52 1 1 1036 1 1035 0.0 1979
MS.gene071317.t1 MTR_4g083620 41.778 225 121 6 195 410 98 321 6.90e-43 160
MS.gene071317.t1 MTR_2g028940 30.390 385 260 4 693 1074 566 945 2.14e-37 152
MS.gene071317.t1 MTR_2g028940 35.448 268 137 9 165 422 41 282 3.02e-32 136
MS.gene071317.t1 MTR_2g028940 30.925 346 231 4 693 1035 566 906 2.36e-33 139
MS.gene071317.t1 MTR_2g028940 35.448 268 137 9 165 422 41 282 2.61e-32 136
MS.gene071317.t1 MTR_2g028940 35.448 268 137 9 165 422 41 282 1.36e-32 136
MS.gene071317.t1 MTR_2g028940 32.468 154 102 2 693 844 566 719 2.81e-13 74.7
MS.gene071317.t1 MTR_1g090320 28.132 423 271 13 638 1055 776 1170 7.87e-26 116
MS.gene071317.t1 MTR_1g090320 36.667 120 76 0 597 716 514 633 8.81e-21 99.8
MS.gene071317.t1 MTR_1g090320 26.141 241 137 5 200 405 15 249 5.23e-14 77.4
MS.gene071317.t1 MTR_1g090320 28.132 423 271 13 638 1055 778 1172 9.58e-26 115
MS.gene071317.t1 MTR_1g090320 36.667 120 76 0 597 716 516 635 9.12e-21 99.8
MS.gene071317.t1 MTR_1g090320 26.141 241 137 5 200 405 17 251 5.65e-14 77.4
MS.gene071317.t1 MTR_8g103227 52.000 75 36 0 590 664 389 463 6.25e-20 96.7
MS.gene071317.t1 MTR_8g103227 25.974 385 274 8 693 1073 658 1035 6.72e-17 87.0
MS.gene071317.t1 MTR_7g117890 30.675 163 104 3 598 760 257 410 2.53e-15 81.6
MS.gene071317.t1 MTR_7g059405 35.938 128 65 5 537 663 219 330 7.08e-15 79.7
MS.gene071317.t1 MTR_5g034440 29.371 143 75 4 599 740 283 400 2.80e-13 74.7
MS.gene071317.t1 MTR_7g078330 42.169 83 44 2 581 663 262 340 1.25e-12 72.4
MS.gene071317.t1 MTR_2g436530 22.751 378 272 9 693 1068 484 843 2.78e-12 71.6
MS.gene071317.t1 MTR_4g063800 39.437 71 42 1 593 663 252 321 3.02e-12 71.2
MS.gene071317.t1 MTR_3g096370 44.286 70 36 2 595 663 9 76 4.34e-12 69.7
MS.gene071317.t1 MTR_4g107010 26.768 198 113 6 597 790 281 450 1.48e-11 69.3
MS.gene071317.t1 MTR_7g053260 40.580 69 40 1 595 663 77 144 1.53e-11 68.6
MS.gene071317.t1 MTR_5g077510 41.429 70 38 2 595 663 34 101 2.21e-11 67.8
MS.gene071317.t1 MTR_4g085720 43.478 69 36 2 596 663 14 80 2.39e-11 67.4
MS.gene071317.t1 MTR_2g018010 35.870 92 55 3 575 665 272 360 3.61e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071317.t1 AT1G76390 38.095 105 52 4 586 683 20 118 2.15e-12 72.0
MS.gene071317.t1 AT1G76390 38.095 105 52 4 586 683 20 118 2.15e-12 72.0
MS.gene071317.t1 AT1G68940 26.619 278 146 12 565 804 265 522 6.13e-12 70.9
MS.gene071317.t1 AT1G68940 26.619 278 146 12 565 804 212 469 6.39e-12 70.5
MS.gene071317.t1 AT1G68940 26.619 278 146 12 565 804 265 522 6.50e-12 70.5
MS.gene071317.t1 AT5G42340 40.000 80 47 1 584 663 278 356 8.10e-12 70.1
MS.gene071317.t1 AT1G49780 43.478 69 36 2 596 663 14 80 2.68e-11 67.4
MS.gene071317.t1 AT3G07360 40.580 69 40 1 595 663 73 140 3.35e-11 67.4
MS.gene071317.t1 AT1G20780 37.895 95 51 3 596 683 23 116 4.50e-11 67.8
MS.gene071317.t1 AT1G20780 37.895 95 51 3 596 683 23 116 4.50e-11 67.8
MS.gene071317.t1 AT1G20780 37.895 95 51 3 596 683 23 116 4.50e-11 67.8
MS.gene071317.t1 AT1G23030 38.889 72 43 1 595 666 240 310 9.43e-11 66.2

Find 151 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTTCATTATACACTTTC+TGG 0.079952 7.1:-87898424 None:intergenic
ATAGTAGGGGTTATCTTATT+TGG 0.182015 7.1:-87899384 None:intergenic
CGATCAAACGCTTCAAAATA+AGG 0.183245 7.1:-87899700 None:intergenic
ATGGACTAGTTGATGTATTA+TGG 0.202999 7.1:+87902157 MS.gene071317:CDS
GCTAAGCATATAATCTCTTT+AGG 0.228808 7.1:+87899881 MS.gene071317:CDS
AAACTTTATGATTCTTTCTT+TGG 0.229672 7.1:+87898832 MS.gene071317:CDS
AGTATAAATGGCTTCATCTT+TGG 0.231855 7.1:+87897266 None:intergenic
ACTGTTTAAATTAGTTTCTA+TGG 0.282515 7.1:-87899301 None:intergenic
CTAAGCATATAATCTCTTTA+GGG 0.289542 7.1:+87899882 MS.gene071317:CDS
AAGTGATCCTCTTCACTCTT+TGG 0.296475 7.1:+87897371 MS.gene071317:CDS
TTCAACTTCAGTAAAATATC+AGG 0.299538 7.1:+87901624 MS.gene071317:CDS
TTGCTTTATATTACAAAGAT+TGG 0.314400 7.1:+87898468 MS.gene071317:CDS
TATAATGAAAGTTTGGATTC+AGG 0.314769 7.1:+87898434 MS.gene071317:CDS
GAGGTTTGAACAAGGAAATT+TGG 0.318367 7.1:+87899925 MS.gene071317:CDS
ATGCAGCTTAGCATTATTAC+TGG 0.324069 7.1:+87898101 MS.gene071317:CDS
AAAGGTTTGACCTGACTCTA+AGG 0.329503 7.1:-87899582 None:intergenic
GATATTGCTCCCCTTCTTCA+TGG 0.330057 7.1:+87902138 MS.gene071317:CDS
GAAAGTGTATAATGAAAGTT+TGG 0.337823 7.1:+87898427 MS.gene071317:CDS
GATATTGTTGCCTGAACTTT+GGG 0.343487 7.1:+87898295 MS.gene071317:CDS
AACTGTGAGAGAGGTTCTTA+TGG 0.343570 7.1:+87898910 MS.gene071317:CDS
TTCAAAATAAGGTTGCTAAA+TGG 0.346748 7.1:-87899689 None:intergenic
CAGATTCTCCCTATACAAAA+TGG 0.348155 7.1:-87902199 None:intergenic
GGAAGATGAAGAAGAAGAAA+TGG 0.363565 7.1:+87901335 MS.gene071317:intron
AAGAAAGCAGGTTATAATAA+TGG 0.369011 7.1:+87901123 MS.gene071317:CDS
TCTAAAGTATTTCCTGTTAC+CGG 0.369352 7.1:-87899653 None:intergenic
AACTTTCTGATTTGAAGAAA+TGG 0.370655 7.1:+87898336 MS.gene071317:CDS
CAAAGAAAAGAAGGAACAAT+TGG 0.374214 7.1:+87897656 MS.gene071317:CDS
TGACCTGACTCTAAGGTAAC+TGG 0.378146 7.1:-87899575 None:intergenic
CGATATTGTTGCCTGAACTT+TGG 0.378191 7.1:+87898294 MS.gene071317:CDS
CTTATTACACTTTGAACTAC+TGG 0.379975 7.1:+87900628 MS.gene071317:CDS
AAGATAACCCCTACTATTGA+TGG 0.384414 7.1:+87899390 MS.gene071317:CDS
CACTTCTTTCATAAGTGGCT+TGG 0.399869 7.1:+87900517 MS.gene071317:CDS
AACAGAACATGTCCGGTAAC+AGG 0.401864 7.1:+87899641 MS.gene071317:CDS
GGGTTCTTTCGTTTCTCTGT+AGG 0.417240 7.1:+87899903 MS.gene071317:CDS
ATAACCTGCTTTCTTTAAGA+TGG 0.427114 7.1:-87901115 None:intergenic
AATTCATCAGATAGTGATAG+TGG 0.427587 7.1:+87897588 MS.gene071317:CDS
AGAAATGGATGAAGAGTTCA+TGG 0.427897 7.1:+87901350 MS.gene071317:CDS
AATTCATGAACTGGTACTCT+TGG 0.428025 7.1:-87899012 None:intergenic
CATCAAGGCATGGTTTCAAA+AGG 0.431872 7.1:+87899616 MS.gene071317:CDS
TCTTGAGCTTCTTCACAGTA+AGG 0.432710 7.1:+87900045 MS.gene071317:CDS
AAGAAAACTAACCGACGAAA+TGG 0.434545 7.1:-87901202 None:intergenic
AAAGAAAAGAAGGAACAATT+GGG 0.435116 7.1:+87897657 MS.gene071317:CDS
TTCTTTCATAAGTGGCTTGG+TGG 0.436399 7.1:+87900520 MS.gene071317:CDS
TGAAGCGTTTGATCGATAAC+TGG 0.436744 7.1:+87899708 MS.gene071317:CDS
AATATCGTCCGCGCCTGAAA+AGG 0.442304 7.1:-87898278 None:intergenic
GATGTCACTTCTTTCATAAG+TGG 0.443620 7.1:+87900512 MS.gene071317:CDS
ATAAATTCCTGTGGTATGCT+TGG 0.444770 7.1:-87899521 None:intergenic
TCTGACAAGAAATATCTTTG+AGG 0.446797 7.1:+87899550 MS.gene071317:CDS
AATAGACGCTCCCAAAGTTC+AGG 0.451875 7.1:-87898305 None:intergenic
AACCTTGTCATCATTTAAGC+TGG 0.455375 7.1:-87901016 None:intergenic
CAAGGACAGCTGCAGAAGAA+TGG 0.461431 7.1:+87899238 MS.gene071317:CDS
CTTTCTAAACAGTATAATGC+TGG 0.465237 7.1:+87901504 MS.gene071317:CDS
AATGGAAACTAGTGCTTTCA+CGG 0.469991 7.1:-87897868 None:intergenic
TTCTATGTATCCATTCAGAA+TGG 0.471459 7.1:-87897886 None:intergenic
GCACTAGTTTCCATTCTGAA+TGG 0.474787 7.1:+87897876 MS.gene071317:CDS
AACTTGTTAGAATCAATGAT+TGG 0.475567 7.1:+87901375 MS.gene071317:CDS
AAAGAGAAGAATTCCAGAAA+TGG 0.476144 7.1:+87899261 MS.gene071317:CDS
TAATACCTGTCGACTCGTAA+TGG 0.478741 7.1:-87898546 None:intergenic
CATCAACTAGTCCATGAAGA+AGG 0.482713 7.1:-87902149 None:intergenic
CAAGTGTCTAATGTGAAAAG+AGG 0.484843 7.1:+87897633 MS.gene071317:CDS
GCCGTTGATCCTCTTCATCA+AGG 0.486422 7.1:-87901170 None:intergenic
ATCTCCTAGCCTTGATGAAG+AGG 0.488093 7.1:+87901161 MS.gene071317:CDS
CTGAGAGATGATAGCTAAGA+AGG 0.488827 7.1:-87901541 None:intergenic
GGCATATAGAATTCATGAAC+TGG 0.491434 7.1:-87899021 None:intergenic
TTTGAATTTCATTCAACTTG+AGG 0.494489 7.1:+87897965 MS.gene071317:CDS
ACCATTGCCTGTGGCGAGAA+TGG 0.494969 7.1:-87898802 None:intergenic
GCTCAAGTTCTTCATTCTCA+AGG 0.497709 7.1:-87901575 None:intergenic
AGCATATATGAATCCTTCAA+TGG 0.500188 7.1:-87897687 None:intergenic
TCAAGATCTTCTTTCCATCA+TGG 0.500865 7.1:+87897342 MS.gene071317:CDS
CTTGTCTAATAACTGTTACA+TGG 0.501990 7.1:+87901469 MS.gene071317:CDS
ATTCCGATGGAAGGAATAGT+TGG 0.504559 7.1:-87898512 None:intergenic
GTAGTTCAAAGTGTAATAAG+AGG 0.504871 7.1:-87900625 None:intergenic
AGAATCTAAACATCTAGATA+TGG 0.504905 7.1:-87901424 None:intergenic
TCTTTCATAAGTGGCTTGGT+GGG 0.512051 7.1:+87900521 MS.gene071317:CDS
CGAATTTCCCACAGTTTGAG+AGG 0.512056 7.1:-87899765 None:intergenic
CTTTGAAAGAAAAGCCATCA+AGG 0.514152 7.1:+87899601 MS.gene071317:CDS
TTTGGAGCAGCTTCTTGCAC+AGG 0.514480 7.1:+87897284 MS.gene071317:CDS
TTCTTTCGTTTCTCTGTAGG+AGG 0.515913 7.1:+87899906 MS.gene071317:CDS
ATTATCTTCCTTGAAAGAAG+AGG 0.516340 7.1:+87899844 MS.gene071317:CDS
GAAAAGAGGCAAAGAAAAGA+AGG 0.518665 7.1:+87897647 MS.gene071317:CDS
GAACCAGTTACCTTAGAGTC+AGG 0.520909 7.1:+87899572 MS.gene071317:CDS
ATTGCTTATCTGATATCTTG+AGG 0.529217 7.1:-87897457 None:intergenic
TCAAAGATATTTCTTGTCAG+AGG 0.534699 7.1:-87899548 None:intergenic
ATCAACTAGTCCATGAAGAA+GGG 0.539153 7.1:-87902148 None:intergenic
TCATTGACAAAAGTTCAGTA+AGG 0.539896 7.1:-87900099 None:intergenic
TAATGACAGGGAAGTTCACT+TGG 0.540383 7.1:+87898748 MS.gene071317:intron
AGCAGCTTCTTGCACAGGAA+GGG 0.540666 7.1:+87897289 MS.gene071317:CDS
AAAGGGAAACAGAACATGTC+CGG 0.542373 7.1:+87899634 MS.gene071317:CDS
ACCATTCTCGCCACAGGCAA+TGG 0.544070 7.1:+87898801 MS.gene071317:CDS
CTCTGTAGGAGGTTTGAACA+AGG 0.545055 7.1:+87899917 MS.gene071317:CDS
GAGATGATAGCTAAGAAGGC+AGG 0.545629 7.1:-87901537 None:intergenic
CGACTCGTAATGGATAATGA+TGG 0.548637 7.1:-87898536 None:intergenic
ACTACCATCTTAAAGAAAGC+AGG 0.549148 7.1:+87901111 MS.gene071317:CDS
GGCATCAAGTGCCTCTGCAA+TGG 0.549842 7.1:-87900995 None:intergenic
TAATAAGAGGACAGCGATGA+GGG 0.550715 7.1:-87900612 None:intergenic
CTCAAGACTTGTAATCACCT+TGG 0.550915 7.1:-87898006 None:intergenic
CTAGACATGTAGATTTGATG+AGG 0.555129 7.1:+87901445 MS.gene071317:CDS
GTTGCATATATAAGATAGCA+AGG 0.557196 7.1:+87900002 MS.gene071317:CDS
GCCTTGATGAAGAGGATCAA+CGG 0.558378 7.1:+87901169 MS.gene071317:CDS
ATCAAGGCATGGTTTCAAAA+GGG 0.559344 7.1:+87899617 MS.gene071317:CDS
TTAGAATCAATGATTGGTGA+TGG 0.561943 7.1:+87901381 MS.gene071317:CDS
ATTATCCATTACGAGTCGAC+AGG 0.568253 7.1:+87898541 MS.gene071317:CDS
TCAAACTGTGGGAAATTCGA+AGG 0.569601 7.1:+87899769 MS.gene071317:CDS
AAAGAAAAGCCATCAAGGCA+TGG 0.569716 7.1:+87899606 MS.gene071317:CDS
ATTATACTGTTTAGAAAGTG+AGG 0.571728 7.1:-87901499 None:intergenic
ACTTCAACTTCATAGACTTG+AGG 0.573701 7.1:-87898862 None:intergenic
TAGACATGTAGATTTGATGA+GGG 0.575230 7.1:+87901446 MS.gene071317:CDS
ATTATTTGTTATCATTCCAG+TGG 0.576441 7.1:-87901088 None:intergenic
TTGCATATATAAGATAGCAA+GGG 0.577003 7.1:+87900003 MS.gene071317:CDS
TGATCCTCTTCATCAAGGCT+AGG 0.580353 7.1:-87901165 None:intergenic
AATAATATTTGACAGCGGAA+AGG 0.581020 7.1:+87899210 MS.gene071317:intron
CAACGAACCATTCTCGCCAC+AGG 0.582453 7.1:+87898795 MS.gene071317:CDS
AATGATGGAATTCCGATGGA+AGG 0.584929 7.1:-87898521 None:intergenic
AGCTTTGAAAACTGTGAGAG+AGG 0.585518 7.1:+87898901 MS.gene071317:CDS
TACAAAGATTGGCTCAGTGA+AGG 0.585870 7.1:+87898479 MS.gene071317:CDS
GAGCAGCTTCTTGCACAGGA+AGG 0.586816 7.1:+87897288 MS.gene071317:CDS
GCTATCATCTCTCAGCTGAA+AGG 0.587912 7.1:+87901549 MS.gene071317:CDS
GGATAATGATGGAATTCCGA+TGG 0.588555 7.1:-87898525 None:intergenic
CTATCTTCCAAAGAGTGAAG+AGG 0.591307 7.1:-87897378 None:intergenic
GGAAACAAGTTAAATAACGA+AGG 0.597175 7.1:+87897528 MS.gene071317:CDS
GATCACTTGAATTACCATGA+TGG 0.601325 7.1:-87897356 None:intergenic
ATATGCAACTAGAATCTGAT+CGG 0.602029 7.1:-87899988 None:intergenic
ATATTCTCCAAGCATACCAC+AGG 0.604413 7.1:+87899514 MS.gene071317:CDS
TATATGCTTAGACAATTGAG+TGG 0.608616 7.1:+87897702 MS.gene071317:CDS
CAGGAAGGGTTCAAAGCAAG+CGG 0.609110 7.1:+87897303 MS.gene071317:CDS
TTTCTTACCATCAATAGTAG+GGG 0.612144 7.1:-87899397 None:intergenic
TGCCAGCTTAAATGATGACA+AGG 0.619717 7.1:+87901014 MS.gene071317:CDS
GTTTAGCATATACATAGAGA+TGG 0.619765 7.1:+87900963 MS.gene071317:CDS
GAAACAAGTTAAATAACGAA+GGG 0.623558 7.1:+87897529 MS.gene071317:CDS
ACTCCAACTATTCCTTCCAT+CGG 0.626415 7.1:+87898509 MS.gene071317:CDS
AGAGCGCAATTCTGAGACCA+AGG 0.627342 7.1:+87897989 MS.gene071317:CDS
TGCATATATAAGATAGCAAG+GGG 0.634241 7.1:+87900004 MS.gene071317:CDS
TTTGAGAGGCAAAATCAAGA+AGG 0.635942 7.1:-87899751 None:intergenic
TAAGCATATAATCTCTTTAG+GGG 0.637602 7.1:+87899883 MS.gene071317:CDS
TCAACTAGTCCATGAAGAAG+GGG 0.638307 7.1:-87902147 None:intergenic
GCTAAATGTAACCATTTCGT+CGG 0.644677 7.1:+87901191 MS.gene071317:CDS
CTGTGGCGAGAATGGTTCGT+TGG 0.657069 7.1:-87898794 None:intergenic
GAAGAAATGGTATGACAACA+AGG 0.658330 7.1:+87898349 MS.gene071317:CDS
GACAGCGGAAAGGAACATCA+AGG 0.658940 7.1:+87899220 MS.gene071317:intron
AAGTTGAATGAAATTCAAAG+AGG 0.660155 7.1:-87897961 None:intergenic
CAAGCGGCAGAAAAGTGCAA+AGG 0.663772 7.1:+87897319 MS.gene071317:CDS
GTAATAAGAGGACAGCGATG+AGG 0.664032 7.1:-87900613 None:intergenic
TCAAAGAGGAGAAACAATTG+TGG 0.665172 7.1:-87897947 None:intergenic
GGCTGTGAATGCCATTGCAG+AGG 0.666777 7.1:+87900984 MS.gene071317:CDS
CTATGAAGTTGAAGTTGATG+AGG 0.667707 7.1:+87898870 MS.gene071317:CDS
TCATGAATTCTATATGCCTG+TGG 0.669411 7.1:+87899026 MS.gene071317:CDS
AAGAAAAGAAGGAACAATTG+GGG 0.676981 7.1:+87897658 MS.gene071317:CDS
AGAAAAGAAGGAACAATTGG+GGG 0.678559 7.1:+87897659 MS.gene071317:CDS
AGAGGACAAATAAATTCCTG+TGG 0.684769 7.1:-87899530 None:intergenic
AATAAGAGGACAGCGATGAG+GGG 0.685162 7.1:-87900611 None:intergenic
GGATCAAATATACAACACTG+AGG 0.761941 7.1:-87898202 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAAAAAAAAGACAAAA+AGG - chr7.1:87899063-87899082 None:intergenic 10.0%
!!! TCTTTTTGTTTTTTTTTTAA+TGG + chr7.1:87901221-87901240 MS.gene071317:intron 10.0%
!!! TTCATTTTACATAAAATTTT+TGG + chr7.1:87899482-87899501 MS.gene071317:intron 10.0%
!! ACTAAAATATTCAAATTCAT+TGG + chr7.1:87901819-87901838 MS.gene071317:intron 15.0%
!!! ACTATAAATAATTTTACTGT+AGG - chr7.1:87899114-87899133 None:intergenic 15.0%
!!! AGATTTTTATCACAAATAAA+CGG - chr7.1:87901663-87901682 None:intergenic 15.0%
!!! AGTGATAATAATGTTTTTAT+AGG + chr7.1:87897507-87897526 MS.gene071317:CDS 15.0%
!!! TATTAATGTTTTTTTAACGA+TGG - chr7.1:87898941-87898960 None:intergenic 15.0%
!! AAACTTTATGATTCTTTCTT+TGG + chr7.1:87898832-87898851 MS.gene071317:CDS 20.0%
!! ATCGTAAAAAAGTTAATAAG+TGG + chr7.1:87901906-87901925 MS.gene071317:intron 20.0%
!! ATTGAATTTCATTCATTGTT+TGG - chr7.1:87900880-87900899 None:intergenic 20.0%
!! GATAAAAATCTTGCTAATTT+CGG + chr7.1:87901672-87901691 MS.gene071317:intron 20.0%
!! TCATATCTATAAACTAGTAT+CGG - chr7.1:87902019-87902038 None:intergenic 20.0%
!! TCATTTAGTTAAAAAATGAC+AGG + chr7.1:87901314-87901333 MS.gene071317:intron 20.0%
!! TCTTTCGAAATATTATTTAC+TGG + chr7.1:87900466-87900485 MS.gene071317:intron 20.0%
!! TTGCTTTATATTACAAAGAT+TGG + chr7.1:87898468-87898487 MS.gene071317:CDS 20.0%
!!! AATAGTATTGCATTTTTTGT+TGG - chr7.1:87900079-87900098 None:intergenic 20.0%
!!! ACTGTTTAAATTAGTTTCTA+TGG - chr7.1:87899304-87899323 None:intergenic 20.0%
!!! ATACATAGAAAGTTTTCTAA+CGG + chr7.1:87897899-87897918 MS.gene071317:CDS 20.0%
!!! ATAGTATTGCATTTTTTGTT+GGG - chr7.1:87900078-87900097 None:intergenic 20.0%
!!! CTATTTATTTTGTAGAAGAA+AGG + chr7.1:87900490-87900509 MS.gene071317:intron 20.0%
!!! GTGAGATTTTTATCAAATTT+TGG + chr7.1:87900126-87900145 MS.gene071317:intron 20.0%
!!! TTACATAAAATTTTTGGTGT+AGG + chr7.1:87899488-87899507 MS.gene071317:intron 20.0%
!!! TTGTTATCTTCATTTTCTTA+TGG - chr7.1:87898678-87898697 None:intergenic 20.0%
! AAAGAAAAGAAGGAACAATT+GGG + chr7.1:87897657-87897676 MS.gene071317:CDS 25.0%
! AAAGTCTCTTTAACATTGAA+GGG - chr7.1:87900828-87900847 None:intergenic 25.0%
! AAATGACACATATAATGAGA+CGG - chr7.1:87901731-87901750 None:intergenic 25.0%
! AACTTTCATTATACACTTTC+TGG - chr7.1:87898427-87898446 None:intergenic 25.0%
! AAGAAAGCAGGTTATAATAA+TGG + chr7.1:87901123-87901142 MS.gene071317:CDS 25.0%
! AAGTTGAATGAAATTCAAAG+AGG - chr7.1:87897964-87897983 None:intergenic 25.0%
! AATATTCAAATTCATTGGAG+TGG + chr7.1:87901824-87901843 MS.gene071317:intron 25.0%
! AGAATCTAAACATCTAGATA+TGG - chr7.1:87901427-87901446 None:intergenic 25.0%
! ATAGACTGTTCAATATTTAG+AGG - chr7.1:87900773-87900792 None:intergenic 25.0%
! ATATTTAAAGATCAAGTGAC+TGG + chr7.1:87900796-87900815 MS.gene071317:intron 25.0%
! ATTATACTGTTTAGAAAGTG+AGG - chr7.1:87901502-87901521 None:intergenic 25.0%
! CAAATAGAGGTTATAAATAG+CGG + chr7.1:87900267-87900286 MS.gene071317:intron 25.0%
! CCAAAGAAAAAAGAAAGTTT+CGG + chr7.1:87898223-87898242 MS.gene071317:CDS 25.0%
! CTAAGCATATAATCTCTTTA+GGG + chr7.1:87899882-87899901 MS.gene071317:CDS 25.0%
! GAAACAAGTTAAATAACGAA+GGG + chr7.1:87897529-87897548 MS.gene071317:CDS 25.0%
! GATATTCCAAAGTGAAAAAT+AGG + chr7.1:87901935-87901954 MS.gene071317:intron 25.0%
! GTTATAAATAGCGGTTATAA+CGG + chr7.1:87900276-87900295 MS.gene071317:intron 25.0%
! TAAGCATATAATCTCTTTAG+GGG + chr7.1:87899883-87899902 MS.gene071317:CDS 25.0%
! TATAATGAAAGTTTGGATTC+AGG + chr7.1:87898434-87898453 MS.gene071317:CDS 25.0%
! TTAGAGATAAAGTCAGTTAA+TGG - chr7.1:87898731-87898750 None:intergenic 25.0%
! TTCAAAATAAGGTTGCTAAA+TGG - chr7.1:87899692-87899711 None:intergenic 25.0%
! TTCAACTTCAGTAAAATATC+AGG + chr7.1:87901624-87901643 MS.gene071317:CDS 25.0%
! TTGATCGATAATGAATACAA+AGG + chr7.1:87898633-87898652 MS.gene071317:intron 25.0%
! TTGCATATATAAGATAGCAA+GGG + chr7.1:87900003-87900022 MS.gene071317:CDS 25.0%
! TTTGAATTTCATTCAACTTG+AGG + chr7.1:87897965-87897984 MS.gene071317:CDS 25.0%
!! AACTTTCTGATTTGAAGAAA+TGG + chr7.1:87898336-87898355 MS.gene071317:CDS 25.0%
!! ATGTATATGCTAAACTTTTG+AGG - chr7.1:87900958-87900977 None:intergenic 25.0%
!! GAAAGTGTATAATGAAAGTT+TGG + chr7.1:87898427-87898446 MS.gene071317:CDS 25.0%
!! TATTTTACTGAAGTTGAACA+AGG - chr7.1:87901622-87901641 None:intergenic 25.0%
!! TTTTCTTACCATCAATAGTA+GGG - chr7.1:87899401-87899420 None:intergenic 25.0%
!! TTTTTCTTACCATCAATAGT+AGG - chr7.1:87899402-87899421 None:intergenic 25.0%
!!! AAAATCCATTTGTTATCTGA+AGG - chr7.1:87899447-87899466 None:intergenic 25.0%
!!! AACTTGTTAGAATCAATGAT+TGG + chr7.1:87901375-87901394 MS.gene071317:CDS 25.0%
!!! ATTATTTGTTATCATTCCAG+TGG - chr7.1:87901091-87901110 None:intergenic 25.0%
!!! ATTTCATTTGCTTTTTCATG+TGG - chr7.1:87899345-87899364 None:intergenic 25.0%
!!! CTCATTATATGTGTCATTTT+AGG + chr7.1:87901732-87901751 MS.gene071317:intron 25.0%
!!! TAGTATTGCATTTTTTGTTG+GGG - chr7.1:87900077-87900096 None:intergenic 25.0%
!!! TTGAGGTTGTTTTTATAAGA+GGG + chr7.1:87900731-87900750 MS.gene071317:intron 25.0%
AAAGAGAAGAATTCCAGAAA+TGG + chr7.1:87899261-87899280 MS.gene071317:CDS 30.0%
AAAGGTGAAATTATTACCAC+AGG - chr7.1:87899045-87899064 None:intergenic 30.0%
AAGAAAAGAAGGAACAATTG+GGG + chr7.1:87897658-87897677 MS.gene071317:CDS 30.0%
AATAATATTTGACAGCGGAA+AGG + chr7.1:87899210-87899229 MS.gene071317:intron 30.0%
AATTCATCAGATAGTGATAG+TGG + chr7.1:87897588-87897607 MS.gene071317:CDS 30.0%
AGATAAAGTCAGTTAATGGT+TGG - chr7.1:87898727-87898746 None:intergenic 30.0%
AGCATATATGAATCCTTCAA+TGG - chr7.1:87897690-87897709 None:intergenic 30.0%
ATAGTAGGGGTTATCTTATT+TGG - chr7.1:87899387-87899406 None:intergenic 30.0%
ATATGCAACTAGAATCTGAT+CGG - chr7.1:87899991-87900010 None:intergenic 30.0%
ATTATCTTCCTTGAAAGAAG+AGG + chr7.1:87899844-87899863 MS.gene071317:CDS 30.0%
ATTGCTTATCTGATATCTTG+AGG - chr7.1:87897460-87897479 None:intergenic 30.0%
CAAAGAAAAGAAGGAACAAT+TGG + chr7.1:87897656-87897675 MS.gene071317:CDS 30.0%
CAGAATAGTGTTATCAATGA+CGG - chr7.1:87900434-87900453 None:intergenic 30.0%
CTGTCAATAATATTTGACAG+CGG + chr7.1:87899205-87899224 MS.gene071317:intron 30.0%
CTTATTACACTTTGAACTAC+TGG + chr7.1:87900628-87900647 MS.gene071317:CDS 30.0%
CTTCAGTAAAATATCAGGTT+TGG + chr7.1:87901629-87901648 MS.gene071317:intron 30.0%
CTTGTCTAATAACTGTTACA+TGG + chr7.1:87901469-87901488 MS.gene071317:CDS 30.0%
CTTTCTAAACAGTATAATGC+TGG + chr7.1:87901504-87901523 MS.gene071317:CDS 30.0%
GAAAGTCTCTTTAACATTGA+AGG - chr7.1:87900829-87900848 None:intergenic 30.0%
GCTAAGCATATAATCTCTTT+AGG + chr7.1:87899881-87899900 MS.gene071317:CDS 30.0%
GGAAACAAGTTAAATAACGA+AGG + chr7.1:87897528-87897547 MS.gene071317:CDS 30.0%
GTAGTTCAAAGTGTAATAAG+AGG - chr7.1:87900628-87900647 None:intergenic 30.0%
GTATCAATGTTGTCAAATAG+AGG + chr7.1:87900254-87900273 MS.gene071317:intron 30.0%
GTCACTTAATGAATGTATCT+AGG + chr7.1:87901284-87901303 MS.gene071317:intron 30.0%
GTTGCATATATAAGATAGCA+AGG + chr7.1:87900002-87900021 MS.gene071317:CDS 30.0%
GTTTAGCATATACATAGAGA+TGG + chr7.1:87900963-87900982 MS.gene071317:CDS 30.0%
TAGACATGTAGATTTGATGA+GGG + chr7.1:87901446-87901465 MS.gene071317:CDS 30.0%
TATATGCTTAGACAATTGAG+TGG + chr7.1:87897702-87897721 MS.gene071317:CDS 30.0%
TATGGACTCTTGTATAAACA+AGG - chr7.1:87898660-87898679 None:intergenic 30.0%
TATTGACAGTGTGAAATATG+AGG - chr7.1:87899194-87899213 None:intergenic 30.0%
TCAAAGATATTTCTTGTCAG+AGG - chr7.1:87899551-87899570 None:intergenic 30.0%
TCATTGACAAAAGTTCAGTA+AGG - chr7.1:87900102-87900121 None:intergenic 30.0%
TCTGACAAGAAATATCTTTG+AGG + chr7.1:87899550-87899569 MS.gene071317:CDS 30.0%
TGACTTTATCTCTAATGACA+GGG + chr7.1:87898736-87898755 MS.gene071317:intron 30.0%
TGCATATATAAGATAGCAAG+GGG + chr7.1:87900004-87900023 MS.gene071317:CDS 30.0%
TTAGAATCAATGATTGGTGA+TGG + chr7.1:87901381-87901400 MS.gene071317:CDS 30.0%
TTATCACAAATAAACGGTGA+TGG - chr7.1:87901657-87901676 None:intergenic 30.0%
TTCTATGTATCCATTCAGAA+TGG - chr7.1:87897889-87897908 None:intergenic 30.0%
TTTCTTACCATCAATAGTAG+GGG - chr7.1:87899400-87899419 None:intergenic 30.0%
! ATAACCTGCTTTCTTTAAGA+TGG - chr7.1:87901118-87901137 None:intergenic 30.0%
! GTGGACTGTCTAATTAAATA+AGG + chr7.1:87901878-87901897 MS.gene071317:intron 30.0%
! TCTAAAGTATTTCCTGTTAC+CGG - chr7.1:87899656-87899675 None:intergenic 30.0%
! TGATTTTTCCTCTTCTTTCA+AGG - chr7.1:87899855-87899874 None:intergenic 30.0%
! TTTTATCAGTGATGTACACT+TGG - chr7.1:87900189-87900208 None:intergenic 30.0%
!! ATGGACTAGTTGATGTATTA+TGG + chr7.1:87902157-87902176 MS.gene071317:CDS 30.0%
!! CAGAACACTTTTGAAGATTA+TGG + chr7.1:87902110-87902129 MS.gene071317:CDS 30.0%
!! CAGATAACAAATGGATTTTC+TGG + chr7.1:87899448-87899467 MS.gene071317:intron 30.0%
!! TCTCAACCTATTTTTCACTT+TGG - chr7.1:87901944-87901963 None:intergenic 30.0%
!! TTCTAACGGATGAAGATTTT+CGG + chr7.1:87897913-87897932 MS.gene071317:CDS 30.0%
!!! AGAGCTATTTTAATCTTGTG+TGG + chr7.1:87901054-87901073 MS.gene071317:CDS 30.0%
!!! ATATTTTCTAGTGCCATTTC+TGG - chr7.1:87899277-87899296 None:intergenic 30.0%
!!! CCGAAACTTTCTTTTTTCTT+TGG - chr7.1:87898226-87898245 None:intergenic 30.0%
!!! GTTGAGGTTGTTTTTATAAG+AGG + chr7.1:87900730-87900749 MS.gene071317:intron 30.0%
AACCTTGTCATCATTTAAGC+TGG - chr7.1:87901019-87901038 None:intergenic 35.0%
AAGAAAACTAACCGACGAAA+TGG - chr7.1:87901205-87901224 None:intergenic 35.0%
AAGATAACCCCTACTATTGA+TGG + chr7.1:87899390-87899409 MS.gene071317:CDS 35.0%
AATGGAAACTAGTGCTTTCA+CGG - chr7.1:87897871-87897890 None:intergenic 35.0%
AATTCATGAACTGGTACTCT+TGG - chr7.1:87899015-87899034 None:intergenic 35.0%
ACTACCATCTTAAAGAAAGC+AGG + chr7.1:87901111-87901130 MS.gene071317:CDS 35.0%
ACTTCAACTTCATAGACTTG+AGG - chr7.1:87898865-87898884 None:intergenic 35.0%
AGAAAAGAAGGAACAATTGG+GGG + chr7.1:87897659-87897678 MS.gene071317:CDS 35.0%
AGAAATGGATGAAGAGTTCA+TGG + chr7.1:87901350-87901369 MS.gene071317:CDS 35.0%
AGAGGACAAATAAATTCCTG+TGG - chr7.1:87899533-87899552 None:intergenic 35.0%
AGCTTCCTTCAGATAACAAA+TGG + chr7.1:87899439-87899458 MS.gene071317:intron 35.0%
ATAAATTCCTGTGGTATGCT+TGG - chr7.1:87899524-87899543 None:intergenic 35.0%
ATCAACTAGTCCATGAAGAA+GGG - chr7.1:87902151-87902170 None:intergenic 35.0%
ATCAAGGCATGGTTTCAAAA+GGG + chr7.1:87899617-87899636 MS.gene071317:CDS 35.0%
ATGCAGCTTAGCATTATTAC+TGG + chr7.1:87898101-87898120 MS.gene071317:CDS 35.0%
CAAGTGTCTAATGTGAAAAG+AGG + chr7.1:87897633-87897652 MS.gene071317:CDS 35.0%
CAGATTCTCCCTATACAAAA+TGG - chr7.1:87902202-87902221 None:intergenic 35.0%
CGATCAAACGCTTCAAAATA+AGG - chr7.1:87899703-87899722 None:intergenic 35.0%
CTAGACATGTAGATTTGATG+AGG + chr7.1:87901445-87901464 MS.gene071317:CDS 35.0%
CTGACTTTATCTCTAATGAC+AGG + chr7.1:87898735-87898754 MS.gene071317:intron 35.0%
GAAAAGAGGCAAAGAAAAGA+AGG + chr7.1:87897647-87897666 MS.gene071317:CDS 35.0%
GAAGAAATGGTATGACAACA+AGG + chr7.1:87898349-87898368 MS.gene071317:CDS 35.0%
GAGGTTTGAACAAGGAAATT+TGG + chr7.1:87899925-87899944 MS.gene071317:CDS 35.0%
GATATTGTTGCCTGAACTTT+GGG + chr7.1:87898295-87898314 MS.gene071317:CDS 35.0%
GATCACTTGAATTACCATGA+TGG - chr7.1:87897359-87897378 None:intergenic 35.0%
GCTAAATGTAACCATTTCGT+CGG + chr7.1:87901191-87901210 MS.gene071317:CDS 35.0%
GGAAGATGAAGAAGAAGAAA+TGG + chr7.1:87901335-87901354 MS.gene071317:intron 35.0%
GGATCAAATATACAACACTG+AGG - chr7.1:87898205-87898224 None:intergenic 35.0%
GGCATATAGAATTCATGAAC+TGG - chr7.1:87899024-87899043 None:intergenic 35.0%
GTAGTAAAGTAGTAGTTAGG+TGG + chr7.1:87901859-87901878 MS.gene071317:intron 35.0%
GTGGTAGTAAAGTAGTAGTT+AGG + chr7.1:87901856-87901875 MS.gene071317:intron 35.0%
TCAAAGAGGAGAAACAATTG+TGG - chr7.1:87897950-87897969 None:intergenic 35.0%
TCAAGATCTTCTTTCCATCA+TGG + chr7.1:87897342-87897361 MS.gene071317:CDS 35.0%
TCATGAATTCTATATGCCTG+TGG + chr7.1:87899026-87899045 MS.gene071317:CDS 35.0%
TCATTCCAGTGGAAGAAAAA+TGG - chr7.1:87901080-87901099 None:intergenic 35.0%
TTTGAGAGGCAAAATCAAGA+AGG - chr7.1:87899754-87899773 None:intergenic 35.0%
! CTCTTTTCACATTAGACACT+TGG - chr7.1:87897635-87897654 None:intergenic 35.0%
! CTGAACTTTTGTCAATGAAG+AGG + chr7.1:87900104-87900123 MS.gene071317:CDS 35.0%
! CTTTGAAAGAAAAGCCATCA+AGG + chr7.1:87899601-87899620 MS.gene071317:CDS 35.0%
! GATGTCACTTCTTTCATAAG+TGG + chr7.1:87900512-87900531 MS.gene071317:CDS 35.0%
! TAAGTTAAAAAAGCGCGATG+AGG + chr7.1:87899796-87899815 MS.gene071317:CDS 35.0%
!! CATAAAGTGCTGTCAAATAG+TGG + chr7.1:87900356-87900375 MS.gene071317:intron 35.0%
!! CTATGAAGTTGAAGTTGATG+AGG + chr7.1:87898870-87898889 MS.gene071317:CDS 35.0%
!! CTTGATGGCTTTTCTTTCAA+AGG - chr7.1:87899603-87899622 None:intergenic 35.0%
!!! AACTGCATGCCATTTTGTAT+AGG + chr7.1:87902190-87902209 MS.gene071317:CDS 35.0%
!!! ACTGCATGCCATTTTGTATA+GGG + chr7.1:87902191-87902210 MS.gene071317:CDS 35.0%
!!! GCTATCGTTTTCAAGTTACA+AGG + chr7.1:87899818-87899837 MS.gene071317:CDS 35.0%
AAAGAAAAGCCATCAAGGCA+TGG + chr7.1:87899606-87899625 MS.gene071317:CDS 40.0%
AAAGGGAAACAGAACATGTC+CGG + chr7.1:87899634-87899653 MS.gene071317:CDS 40.0%
AAAGGTTTGACCTGACTCTA+AGG - chr7.1:87899585-87899604 None:intergenic 40.0%
AACAACCTCAACATCATGCA+AGG - chr7.1:87900722-87900741 None:intergenic 40.0%
AACTGTGAGAGAGGTTCTTA+TGG + chr7.1:87898910-87898929 MS.gene071317:CDS 40.0%
AAGTGATCCTCTTCACTCTT+TGG + chr7.1:87897371-87897390 MS.gene071317:CDS 40.0%
ACTCCAACTATTCCTTCCAT+CGG + chr7.1:87898509-87898528 MS.gene071317:CDS 40.0%
ATATTCTCCAAGCATACCAC+AGG + chr7.1:87899514-87899533 MS.gene071317:CDS 40.0%
ATTATCCATTACGAGTCGAC+AGG + chr7.1:87898541-87898560 MS.gene071317:CDS 40.0%
ATTCCGATGGAAGGAATAGT+TGG - chr7.1:87898515-87898534 None:intergenic 40.0%
ATTGGAGTGGTTGAAAGTAG+TGG + chr7.1:87901837-87901856 MS.gene071317:intron 40.0%
CACTTCTTTCATAAGTGGCT+TGG + chr7.1:87900517-87900536 MS.gene071317:CDS 40.0%
CATCAACTAGTCCATGAAGA+AGG - chr7.1:87902152-87902171 None:intergenic 40.0%
CATCAAGGCATGGTTTCAAA+AGG + chr7.1:87899616-87899635 MS.gene071317:CDS 40.0%
CGATATTGTTGCCTGAACTT+TGG + chr7.1:87898294-87898313 MS.gene071317:CDS 40.0%
CTAGAACATATTTGCACTGC+AGG + chr7.1:87900924-87900943 MS.gene071317:intron 40.0%
CTATCTTCCAAAGAGTGAAG+AGG - chr7.1:87897381-87897400 None:intergenic 40.0%
CTCAAGACTTGTAATCACCT+TGG - chr7.1:87898009-87898028 None:intergenic 40.0%
CTGAGAGATGATAGCTAAGA+AGG - chr7.1:87901544-87901563 None:intergenic 40.0%
GACACATATAATGAGACGGA+GGG - chr7.1:87901727-87901746 None:intergenic 40.0%
GCTCAAGTTCTTCATTCTCA+AGG - chr7.1:87901578-87901597 None:intergenic 40.0%
GGTTGAGACAATGCAATGAT+CGG + chr7.1:87901956-87901975 MS.gene071317:intron 40.0%
TAATAAGAGGACAGCGATGA+GGG - chr7.1:87900615-87900634 None:intergenic 40.0%
TAATGACAGGGAAGTTCACT+TGG + chr7.1:87898748-87898767 MS.gene071317:intron 40.0%
TCAAACTGTGGGAAATTCGA+AGG + chr7.1:87899769-87899788 MS.gene071317:CDS 40.0%
TCAACTAGTCCATGAAGAAG+GGG - chr7.1:87902150-87902169 None:intergenic 40.0%
TCTTGAGCTTCTTCACAGTA+AGG + chr7.1:87900045-87900064 MS.gene071317:CDS 40.0%
TGACACATATAATGAGACGG+AGG - chr7.1:87901728-87901747 None:intergenic 40.0%
TGCCAGCTTAAATGATGACA+AGG + chr7.1:87901014-87901033 MS.gene071317:CDS 40.0%
TGCTACATCAAGCATATGAG+TGG - chr7.1:87899149-87899168 None:intergenic 40.0%
TTCTTTCGTTTCTCTGTAGG+AGG + chr7.1:87899906-87899925 MS.gene071317:CDS 40.0%
! AACGGATGAAGATTTTCGGT+CGG + chr7.1:87897917-87897936 MS.gene071317:CDS 40.0%
! AATGATGGAATTCCGATGGA+AGG - chr7.1:87898524-87898543 None:intergenic 40.0%
! CTCAAGTACGATTTTACGTG+CGG + chr7.1:87898140-87898159 MS.gene071317:CDS 40.0%
! GATTTTGCCTCTCAAACTGT+GGG + chr7.1:87899758-87899777 MS.gene071317:CDS 40.0%
! GCACTAGTTTCCATTCTGAA+TGG + chr7.1:87897876-87897895 MS.gene071317:CDS 40.0%
! GGATAATGATGGAATTCCGA+TGG - chr7.1:87898528-87898547 None:intergenic 40.0%
! TACAAAGATTGGCTCAGTGA+AGG + chr7.1:87898479-87898498 MS.gene071317:CDS 40.0%
! TCAAGTACGATTTTACGTGC+GGG + chr7.1:87898141-87898160 MS.gene071317:CDS 40.0%
! TGAAGCGTTTGATCGATAAC+TGG + chr7.1:87899708-87899727 MS.gene071317:CDS 40.0%
! TGATTTTGCCTCTCAAACTG+TGG + chr7.1:87899757-87899776 MS.gene071317:CDS 40.0%
! TTCTTTCATAAGTGGCTTGG+TGG + chr7.1:87900520-87900539 MS.gene071317:CDS 40.0%
!! AGCTTTGAAAACTGTGAGAG+AGG + chr7.1:87898901-87898920 MS.gene071317:CDS 40.0%
!! CGACTCGTAATGGATAATGA+TGG - chr7.1:87898539-87898558 None:intergenic 40.0%
!! TAATACCTGTCGACTCGTAA+TGG - chr7.1:87898549-87898568 None:intergenic 40.0%
!! TCTTTCATAAGTGGCTTGGT+GGG + chr7.1:87900521-87900540 MS.gene071317:CDS 40.0%
!!! CTTTTGAAACCATGCCTTGA+TGG - chr7.1:87899618-87899637 None:intergenic 40.0%
AACAGAACATGTCCGGTAAC+AGG + chr7.1:87899641-87899660 MS.gene071317:CDS 45.0%
AATAAGAGGACAGCGATGAG+GGG - chr7.1:87900614-87900633 None:intergenic 45.0%
AATAGACGCTCCCAAAGTTC+AGG - chr7.1:87898308-87898327 None:intergenic 45.0%
ATTGGGGGAAAAGCCATTGA+AGG + chr7.1:87897674-87897693 MS.gene071317:CDS 45.0%
CACAGAAAAAACTGCTGCTG+AGG + chr7.1:87898043-87898062 MS.gene071317:CDS 45.0%
CGAATTTCCCACAGTTTGAG+AGG - chr7.1:87899768-87899787 None:intergenic 45.0%
CTCTGTAGGAGGTTTGAACA+AGG + chr7.1:87899917-87899936 MS.gene071317:CDS 45.0%
GAACCAGTTACCTTAGAGTC+AGG + chr7.1:87899572-87899591 MS.gene071317:CDS 45.0%
GAGATGATAGCTAAGAAGGC+AGG - chr7.1:87901540-87901559 None:intergenic 45.0%
GATATTGCTCCCCTTCTTCA+TGG + chr7.1:87902138-87902157 MS.gene071317:CDS 45.0%
GCCTTGATGAAGAGGATCAA+CGG + chr7.1:87901169-87901188 MS.gene071317:CDS 45.0%
GCTATCATCTCTCAGCTGAA+AGG + chr7.1:87901549-87901568 MS.gene071317:CDS 45.0%
GGGTTCTTTCGTTTCTCTGT+AGG + chr7.1:87899903-87899922 MS.gene071317:CDS 45.0%
GTAATAAGAGGACAGCGATG+AGG - chr7.1:87900616-87900635 None:intergenic 45.0%
TGATCCTCTTCATCAAGGCT+AGG - chr7.1:87901168-87901187 None:intergenic 45.0%
! GTTTTGCGACTCTCCTTTTC+AGG + chr7.1:87898265-87898284 MS.gene071317:CDS 45.0%
! TTTTTGCTGACCATTGCCTG+TGG - chr7.1:87898814-87898833 None:intergenic 45.0%
!! ATCTCCTAGCCTTGATGAAG+AGG + chr7.1:87901161-87901180 MS.gene071317:CDS 45.0%
!! CTTAGCCTTGCATGATGTTG+AGG + chr7.1:87900714-87900733 MS.gene071317:intron 45.0%
!! TGACCTGACTCTAAGGTAAC+TGG - chr7.1:87899578-87899597 None:intergenic 45.0%
!!! TGTGGCCATTTTTCTTCCAC+TGG + chr7.1:87901072-87901091 MS.gene071317:CDS 45.0%
AATATCGTCCGCGCCTGAAA+AGG - chr7.1:87898281-87898300 None:intergenic 50.0%
AGCAGCTTCTTGCACAGGAA+GGG + chr7.1:87897289-87897308 MS.gene071317:CDS 50.0%
ATAACGGCGCTATAGCGTAG+TGG + chr7.1:87900292-87900311 MS.gene071317:intron 50.0%
CAAGGACAGCTGCAGAAGAA+TGG + chr7.1:87899238-87899257 MS.gene071317:CDS 50.0%
CAGGAAGGGTTCAAAGCAAG+CGG + chr7.1:87897303-87897322 MS.gene071317:CDS 50.0%
GACAGCGGAAAGGAACATCA+AGG + chr7.1:87899220-87899239 MS.gene071317:intron 50.0%
GCCGTTGATCCTCTTCATCA+AGG - chr7.1:87901173-87901192 None:intergenic 50.0%
! CAAGCGGCAGAAAAGTGCAA+AGG + chr7.1:87897319-87897338 MS.gene071317:CDS 50.0%
! GCGATGAGGGGCTTTTCAAT+TGG - chr7.1:87900602-87900621 None:intergenic 50.0%
! TGACGGATCGCAGAGTATAG+CGG - chr7.1:87900417-87900436 None:intergenic 50.0%
! TTTGGAGCAGCTTCTTGCAC+AGG + chr7.1:87897284-87897303 MS.gene071317:CDS 50.0%
!! AGAGCGCAATTCTGAGACCA+AGG + chr7.1:87897989-87898008 MS.gene071317:CDS 50.0%
ACCATTCTCGCCACAGGCAA+TGG + chr7.1:87898801-87898820 MS.gene071317:CDS 55.0%
ACCATTGCCTGTGGCGAGAA+TGG - chr7.1:87898805-87898824 None:intergenic 55.0%
CAACGAACCATTCTCGCCAC+AGG + chr7.1:87898795-87898814 MS.gene071317:CDS 55.0%
CTGTGGCGAGAATGGTTCGT+TGG - chr7.1:87898797-87898816 None:intergenic 55.0%
GAGCAGCTTCTTGCACAGGA+AGG + chr7.1:87897288-87897307 MS.gene071317:CDS 55.0%
GGCATCAAGTGCCTCTGCAA+TGG - chr7.1:87900998-87901017 None:intergenic 55.0%
GGCTGTGAATGCCATTGCAG+AGG + chr7.1:87900984-87901003 MS.gene071317:CDS 55.0%
!! GCGACTCTCCTTTTCAGGCG+CGG + chr7.1:87898270-87898289 MS.gene071317:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 87897273 87902224 87897273 ID=MS.gene071317
chr7.1 mRNA 87897273 87902224 87897273 ID=MS.gene071317.t1;Parent=MS.gene071317
chr7.1 exon 87897273 87898562 87897273 ID=MS.gene071317.t1.exon1;Parent=MS.gene071317.t1
chr7.1 CDS 87897273 87898562 87897273 ID=cds.MS.gene071317.t1;Parent=MS.gene071317.t1
chr7.1 exon 87898757 87899047 87898757 ID=MS.gene071317.t1.exon2;Parent=MS.gene071317.t1
chr7.1 CDS 87898757 87899047 87898757 ID=cds.MS.gene071317.t1;Parent=MS.gene071317.t1
chr7.1 exon 87899225 87899411 87899225 ID=MS.gene071317.t1.exon3;Parent=MS.gene071317.t1
chr7.1 CDS 87899225 87899411 87899225 ID=cds.MS.gene071317.t1;Parent=MS.gene071317.t1
chr7.1 exon 87899510 87900125 87899510 ID=MS.gene071317.t1.exon4;Parent=MS.gene071317.t1
chr7.1 CDS 87899510 87900125 87899510 ID=cds.MS.gene071317.t1;Parent=MS.gene071317.t1
chr7.1 exon 87900505 87900649 87900505 ID=MS.gene071317.t1.exon5;Parent=MS.gene071317.t1
chr7.1 CDS 87900505 87900649 87900505 ID=cds.MS.gene071317.t1;Parent=MS.gene071317.t1
chr7.1 exon 87900946 87901212 87900946 ID=MS.gene071317.t1.exon6;Parent=MS.gene071317.t1
chr7.1 CDS 87900946 87901212 87900946 ID=cds.MS.gene071317.t1;Parent=MS.gene071317.t1
chr7.1 exon 87901336 87901645 87901336 ID=MS.gene071317.t1.exon7;Parent=MS.gene071317.t1
chr7.1 CDS 87901336 87901645 87901336 ID=cds.MS.gene071317.t1;Parent=MS.gene071317.t1
chr7.1 exon 87902106 87902224 87902106 ID=MS.gene071317.t1.exon8;Parent=MS.gene071317.t1
chr7.1 CDS 87902106 87902224 87902106 ID=cds.MS.gene071317.t1;Parent=MS.gene071317.t1
Gene Sequence

>MS.gene071317

ATGGCTTCATCTTTGGAGCAGCTTCTTGCACAGGAAGGGTTCAAAGCAAGCGGCAGAAAAGTGCAAAGGTCAAGATCTTCTTTCCATCATGGTAATTCAAGTGATCCTCTTCACTCTTTGGAAGATAGACTGTGTGTATCATCAAGTGAAAGAATTAAAACACAGAAAACAAAGTCTAAAACAGCCTCAAGATATCAGATAAGCAATACAAGTGACAATAAAAACATGAGATCAAGTGATAATAATGTTTTTATAGGAAACAAGTTAAATAACGAAGGGTCGAAGAACAGTGAATCTGAGAAGAACAAGTCTTACAATTCATCAGATAGTGATAGTGGATTTGACGATGCTTATTCAAACCAAGTGTCTAATGTGAAAAGAGGCAAAGAAAAGAAGGAACAATTGGGGGAAAAGCCATTGAAGGATTCATATATGCTTAGACAATTGAGTGGAAATAGAAAGAATATAAAACATCAAGAGAAATCATACTCTAGATCAAATAGTAATAGCAAAAACTATGAAGATAGCAAGAACAAAAATAGCAATCATGTTATGCAATTGCAAGATGCTTCTAGTCTTGCTATTGATGAAATTGCCGTGAAAGCACTAGTTTCCATTCTGAATGGATACATAGAAAGTTTTCTAACGGATGAAGATTTTCGGTCGGCATTGCGCCACAATTGTTTCTCCTCTTTGAATTTCATTCAACTTGAGGAAGAGCGCAATTCTGAGACCAAGGTGATTACAAGTCTTGAGCAAGCAATTGAGTGCACAGAAAAAACTGCTGCTGAGGAAACTATATCTGCAACACATCTTAAAAGAGCAACAATGCAGCTTAGCATTATTACTGGTTTGAGTTTGAATGATCTCAAGTACGATTTTACGTGCGGGATTCAAAATTTCAAGTTATCAGCTTGTGCTCATCTTTACCTCAGTGTTGTATATTTGATCCAAAGAAAAAAGAAAGTTTCGGCGAAGCATCTTTTGCAAGTGTTTTGCGACTCTCCTTTTCAGGCGCGGACGATATTGTTGCCTGAACTTTGGGAGCGTCTATTTTCTTCGCAACTTTCTGATTTGAAGAAATGGTATGACAACAAGGAAAGTGAAATTGTTTTAGATACACAAAACAAAGCAAGAAAGATAAAGATTCTCCAGAAAGTGTATAATGAAAGTTTGGATTCAGGAACTCAATTATTTGCTTTATATTACAAAGATTGGCTCAGTGAAGGAGTAGAAACTCCAACTATTCCTTCCATCGGAATTCCATCATTATCCATTACGAGTCGACAGGTATTACTAAAATATCTCATTTATTGATAACTTGATCGATAATTGCTAAAATATCTCATTTATTGATAACTTGATCGATAATGAATACAAAGGACCTTGTTTATACAAGAGTCCATAAGAAAATGAAGATAACAAAGATAACTATCTTAACTAACTGTTAACCAACCATTAACTGACTTTATCTCTAATGACAGGGAAGTTCACTTGGTCATTCTTTTGAGTCTTCTAGCTCCAACGAACCATTCTCGCCACAGGCAATGGTCAGCAAAAAACTTTATGATTCTTTCTTTGGTAGTAAACCTCAAGTCTATGAAGTTGAAGTTGATGAGGATGAAGATAGCTTTGAAAACTGTGAGAGAGGTTCTTATGGTTCGACCATCGTTAAAAAAACATTAATATATGAATCAGAAACTGTTAAATATATCGATCAAAGTACTGAAGAGTTCACTCCAAGAGTACCAGTTCATGAATTCTATATGCCTGTGGTAATAATTTCACCTTTTTGTCTTTTTTTTATATAGAAAAAATCTTAAAAAAATAACAATCTTCCTACAGTAAAATTATTTATAGTTTGATGAGTGAGCCACTCATATGCTTGATGTAGCATTAAAATTTGTTTCTGTTCTGTCCTCATATTTCACACTGTCAATAATATTTGACAGCGGAAAGGAACATCAAGGACAGCTGCAGAAGAATGGAAAGAGAAGAATTCCAGAAATGGCACTAGAAAATATTTCTCCATAGAAACTAATTTAAACAGTCACATATCTAATGATCTACCACATGAAAAAGCAAATGAAATTTCTATCAAAAAGATGCAGCCAAATAAGATAACCCCTACTATTGATGGTAAGAAAAATAATATGTTGACTATGTAGCTTCCTTCAGATAACAAATGGATTTTCTGGCAGATAGATAATTCATTTTACATAAAATTTTTGGTGTAGGATCATATTCTCCAAGCATACCACAGGAATTTATTTGTCCTCTGACAAGAAATATCTTTGAGGAACCAGTTACCTTAGAGTCAGGTCAAACCTTTGAAAGAAAAGCCATCAAGGCATGGTTTCAAAAGGGAAACAGAACATGTCCGGTAACAGGAAATACTTTAGAATGTGTAGTCATACCATTTAGCAACCTTATTTTGAAGCGTTTGATCGATAACTGGAAGTCAGAAGATTTTGATCGCCTTCTTGATTTTGCCTCTCAAACTGTGGGAAATTCGAAGGAAATTAAGTTAAAAAAGCGCGATGAGGCTATCGTTTTCAAGTTACAAGGTCTATTATCTTCCTTGAAAGAAGAGGAAAAATCAACTTATGCTAAGCATATAATCTCTTTAGGGGTTCTTTCGTTTCTCTGTAGGAGGTTTGAACAAGGAAATTTGGAAGAAAAATCACATGTGATCGAGATCTTGTTAAATTGTATCCGATCAGATTCTAGTTGCATATATAAGATAGCAAGGGGTGTCAACAGAAAATTTCTTCTTGAGCTTCTTCACAGTAAGGATGTTACCCCAACAAAAAATGCAATACTATTCCTTACTGAACTTTTGTCAATGAAGAGGTGAGATTTTTATCAAATTTTGGTTTCTTTTTCATATGAGTCACTTTGATTATCATACAGCCAAGTGTACATCACTGATAAAATTTAATTAAAAGATTATTTTGCTCAGTTATTTATCTGCATATTATGTATCAATGTTGTCAAATAGAGGTTATAAATAGCGGTTATAACGGCGCTATAGCGTAGTGGAATTTGAAAAAATCGCTATTGCTATGCAATATGCTATTTAGCATAAAGTGCTGTCAAATAGTGGCTCTATATCACTGTAATATAGCAGAATTAAACAAACCGCTATACTCTGCGATCCGTCATTGATAACACTATTCTGTATATCTACTGCTCTTTCGAAATATTATTTACTGGACTATTTATTTTGTAGAAGAAAGGATGTCACTTCTTTCATAAGTGGCTTGGTGGGTGAAGATGTAGTTAGTACAATGCATATTGTGCTCATGCATCTTAAGAATTCTTCTCCAATTGAAAAGCCCCTCATCGCTGTCCTCTTATTACACTTTGAACTACTGGTATGCTTAATGCATTATCTATGCACATCTTATTTAGTATTTAATGCATTTACATAACTTACTTCTTAGCCTTGCATGATGTTGAGGTTGTTTTTATAAGAGGGTAACATGCAATATTAACCTCTAAATATTGAACAGTCTATATAATATTTAAAGATCAAGTGACTGGCATGTTCCCTTCAATGTTAAAGAGACTTTCAATATTTTTCATGTGATATTTTCTTTAACCAAACAATGAATGAAATTCAATCTCTATCTTTTGTTCAGTTATTGACTAGAACATATTTGCACTGCAGGTTGAGCAGCCTCAAAAGTTTAGCATATACATAGAGATGGCTGTGAATGCCATTGCAGAGGCACTTGATGCCAGCTTAAATGATGACAAGGTTCAAAAGAAGTGTTGCAGAGCTATTTTAATCTTGTGTGGCCATTTTTCTTCCACTGGAATGATAACAAATAATACTACCATCTTAAAGAAAGCAGGTTATAATAATGGTAGCTCAGAATTGAAATCTCCTAGCCTTGATGAAGAGGATCAACGGCTAAATGTAACCATTTCGTCGGTTAGTTTTCTTTTTGTTTTTTTTTTAATGGAAAATGTTAGTTTGTTAGATTAATATTTACTCTTACATGAGTCACTTAATGAATGTATCTAGGATGATAATCATTTAGTTAAAAAATGACAGGAAGATGAAGAAGAAGAAATGGATGAAGAGTTCATGGCAAACTTGTTAGAATCAATGATTGGTGATGGAGAAAGTCTATTTTTGAAGACCATATCTAGATGTTTAGATTCTAGACATGTAGATTTGATGAGGGCTTGTCTAATAACTGTTACATGGTTGAGTTCCTCACTTTCTAAACAGTATAATGCTGGATTGCATCTTCCTGCCTTCTTAGCTATCATCTCTCAGCTGAAAGGAATCCTTGAGAATGAAGAACTTGAGCTCAAGACTCTTGCATCTATGTCCTTGTTCAACTTCAGTAAAATATCAGGTTTGGCACCATCACCGTTTATTTGTGATAAAAATCTTGCTAATTTCGGAACTATTGAAAGCAATTTTAAATGTTATTCCCTCCGTCTCATTATATGTGTCATTTTAGGTAATGCAAATTTCTTAAGAAAATGATTAGTTGTGTTGATTTTTAGAGTAAACTAATGCGTAAATACTAAAATATTCAAATTCATTGGAGTGGTTGAAAGTAGTGGTAGTAAAGTAGTAGTTAGGTGGACTGTCTAATTAAATAAGGACTTCATCGTAAAAAAGTTAATAAGTGGTATATTGATATTCCAAAGTGAAAAATAGGTTGAGACAATGCAATGATCGGAGTATTAAACAGAAAAAGTGTTGATGTGTATGAAAAGCCGATACTAGTTTATAGATATGAACATGCAATTGCATTAAGAAGACATAATTTATATTCAGTTGTATAATATCTTGCAAATTATTTGTAGAATGCAGAACACTTTTGAAGATTATGGCAGACGATATTGCTCCCCTTCTTCATGGACTAGTTGATGTATTATGGACTGCTAAGAAACTGCATGCCATTTTGTATAGGGAGAATCTGTAG

Protein sequence

>MS.gene071317.t1

MASSLEQLLAQEGFKASGRKVQRSRSSFHHGNSSDPLHSLEDRLCVSSSERIKTQKTKSKTASRYQISNTSDNKNMRSSDNNVFIGNKLNNEGSKNSESEKNKSYNSSDSDSGFDDAYSNQVSNVKRGKEKKEQLGEKPLKDSYMLRQLSGNRKNIKHQEKSYSRSNSNSKNYEDSKNKNSNHVMQLQDASSLAIDEIAVKALVSILNGYIESFLTDEDFRSALRHNCFSSLNFIQLEEERNSETKVITSLEQAIECTEKTAAEETISATHLKRATMQLSIITGLSLNDLKYDFTCGIQNFKLSACAHLYLSVVYLIQRKKKVSAKHLLQVFCDSPFQARTILLPELWERLFSSQLSDLKKWYDNKESEIVLDTQNKARKIKILQKVYNESLDSGTQLFALYYKDWLSEGVETPTIPSIGIPSLSITSRQGSSLGHSFESSSSNEPFSPQAMVSKKLYDSFFGSKPQVYEVEVDEDEDSFENCERGSYGSTIVKKTLIYESETVKYIDQSTEEFTPRVPVHEFYMPVRKGTSRTAAEEWKEKNSRNGTRKYFSIETNLNSHISNDLPHEKANEISIKKMQPNKITPTIDGSYSPSIPQEFICPLTRNIFEEPVTLESGQTFERKAIKAWFQKGNRTCPVTGNTLECVVIPFSNLILKRLIDNWKSEDFDRLLDFASQTVGNSKEIKLKKRDEAIVFKLQGLLSSLKEEEKSTYAKHIISLGVLSFLCRRFEQGNLEEKSHVIEILLNCIRSDSSCIYKIARGVNRKFLLELLHSKDVTPTKNAILFLTELLSMKRRKDVTSFISGLVGEDVVSTMHIVLMHLKNSSPIEKPLIAVLLLHFELLVEQPQKFSIYIEMAVNAIAEALDASLNDDKVQKKCCRAILILCGHFSSTGMITNNTTILKKAGYNNGSSELKSPSLDEEDQRLNVTISSEDEEEEMDEEFMANLLESMIGDGESLFLKTISRCLDSRHVDLMRACLITVTWLSSSLSKQYNAGLHLPAFLAIISQLKGILENEELELKTLASMSLFNFSKISECRTLLKIMADDIAPLLHGLVDVLWTAKKLHAILYRENL