Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08195.t1 | XP_003624636.3 | 87.5 | 487 | 58 | 2 | 1 | 485 | 1 | 486 | 1.50E-247 | 865.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08195.t1 | Q9FFN2 | 38.4 | 354 | 195 | 10 | 140 | 480 | 172 | 515 | 2.6e-59 | 231.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08195.t1 | Q2HVN7 | 87.5 | 487 | 58 | 2 | 1 | 485 | 1 | 486 | 1.1e-247 | 865.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene08195 | -0.814237 | 1.71E-51 | -1.69E-46 |
| MS.gene049281 | MS.gene08195 | 0.826121 | 3.23E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene08195 | -0.80692 | 6.51E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene08195 | -0.828177 | 1.04E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene08195 | -0.806827 | 6.81E-50 | -1.69E-46 |
| MS.gene050129 | MS.gene08195 | 0.802239 | 6.17E-49 | -1.69E-46 |
| MS.gene050363 | MS.gene08195 | 0.844216 | 8.68E-59 | -1.69E-46 |
| MS.gene050381 | MS.gene08195 | 0.85283 | 3.57E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene08195 | -0.839262 | 1.76E-57 | -1.69E-46 |
| MS.gene050612 | MS.gene08195 | -0.822908 | 1.84E-53 | -1.69E-46 |
| MS.gene05080 | MS.gene08195 | -0.802005 | 6.89E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene08195 | -0.812109 | 5.00E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene08195 | -0.812027 | 5.21E-51 | -1.69E-46 |
| MS.gene050883 | MS.gene08195 | 0.873213 | 1.75E-67 | -1.69E-46 |
| MS.gene050986 | MS.gene08195 | -0.804315 | 2.29E-49 | -1.69E-46 |
| MS.gene051044 | MS.gene08195 | 0.840624 | 7.77E-58 | -1.69E-46 |
| MS.gene05104 | MS.gene08195 | 0.811886 | 5.60E-51 | -1.69E-46 |
| MS.gene051127 | MS.gene08195 | 0.859662 | 3.54E-63 | -1.69E-46 |
| MS.gene051138 | MS.gene08195 | 0.805112 | 1.56E-49 | -1.69E-46 |
| MS.gene051946 | MS.gene08195 | 0.838815 | 2.30E-57 | -1.69E-46 |
| MS.gene053069 | MS.gene08195 | 0.800728 | 1.26E-48 | -1.69E-46 |
| MS.gene053213 | MS.gene08195 | -0.801924 | 7.16E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene08195 | -0.80121 | 1.00E-48 | -1.69E-46 |
| MS.gene053420 | MS.gene08195 | 0.841029 | 6.09E-58 | -1.69E-46 |
| MS.gene053488 | MS.gene08195 | 0.830601 | 2.68E-55 | -1.69E-46 |
| MS.gene053549 | MS.gene08195 | 0.807289 | 5.43E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene08195 | 0.867467 | 1.34E-65 | -1.69E-46 |
| MS.gene053826 | MS.gene08195 | 0.804735 | 1.87E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene08195 | -0.820595 | 6.31E-53 | -1.69E-46 |
| MS.gene054616 | MS.gene08195 | 0.804523 | 2.07E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene08195 | -0.80541 | 1.35E-49 | -1.69E-46 |
| MS.gene054708 | MS.gene08195 | 0.857683 | 1.38E-62 | -1.69E-46 |
| MS.gene054954 | MS.gene08195 | -0.805086 | 1.58E-49 | -1.69E-46 |
| MS.gene054959 | MS.gene08195 | 0.828116 | 1.07E-54 | -1.69E-46 |
| MS.gene055124 | MS.gene08195 | 0.825551 | 4.41E-54 | -1.69E-46 |
| MS.gene055154 | MS.gene08195 | 0.86035 | 2.20E-63 | -1.69E-46 |
| MS.gene055362 | MS.gene08195 | -0.82593 | 3.58E-54 | -1.69E-46 |
| MS.gene055502 | MS.gene08195 | -0.829884 | 4.01E-55 | -1.69E-46 |
| MS.gene055549 | MS.gene08195 | 0.801182 | 1.02E-48 | -1.69E-46 |
| MS.gene055550 | MS.gene08195 | 0.801263 | 9.78E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene08195 | -0.804438 | 2.16E-49 | -1.69E-46 |
| MS.gene055942 | MS.gene08195 | 0.817509 | 3.18E-52 | -1.69E-46 |
| MS.gene056310 | MS.gene08195 | 0.801732 | 7.84E-49 | -1.69E-46 |
| MS.gene056311 | MS.gene08195 | 0.826913 | 2.09E-54 | -1.69E-46 |
| MS.gene056313 | MS.gene08195 | 0.826489 | 2.64E-54 | -1.69E-46 |
| MS.gene056408 | MS.gene08195 | 0.821793 | 3.34E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene08195 | -0.810349 | 1.20E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene08195 | -0.809832 | 1.56E-50 | -1.69E-46 |
| MS.gene057014 | MS.gene08195 | 0.832691 | 8.18E-56 | -1.69E-46 |
| MS.gene058099 | MS.gene08195 | 0.81778 | 2.76E-52 | -1.69E-46 |
| MS.gene058171 | MS.gene08195 | 0.803438 | 3.49E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene08195 | 0.80495 | 1.69E-49 | -1.69E-46 |
| MS.gene058268 | MS.gene08195 | 0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene08195 | -0.83236 | 9.88E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene08195 | -0.809364 | 1.96E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene08195 | -0.811318 | 7.43E-51 | -1.69E-46 |
| MS.gene058628 | MS.gene08195 | 0.828171 | 1.04E-54 | -1.69E-46 |
| MS.gene058629 | MS.gene08195 | 0.842271 | 2.86E-58 | -1.69E-46 |
| MS.gene058630 | MS.gene08195 | 0.830745 | 2.47E-55 | -1.69E-46 |
| MS.gene058691 | MS.gene08195 | 0.805269 | 1.45E-49 | -1.69E-46 |
| MS.gene058840 | MS.gene08195 | 0.816874 | 4.42E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene08195 | -0.838719 | 2.43E-57 | -1.69E-46 |
| MS.gene059223 | MS.gene08195 | 0.808169 | 3.53E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene08195 | -0.804834 | 1.79E-49 | -1.69E-46 |
| MS.gene059690 | MS.gene08195 | 0.804663 | 1.94E-49 | -1.69E-46 |
| MS.gene059691 | MS.gene08195 | 0.815591 | 8.55E-52 | -1.69E-46 |
| MS.gene059694 | MS.gene08195 | 0.820287 | 7.43E-53 | -1.69E-46 |
| MS.gene059697 | MS.gene08195 | 0.825098 | 5.64E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene08195 | -0.808843 | 2.54E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene08195 | -0.810944 | 8.96E-51 | -1.69E-46 |
| MS.gene059916 | MS.gene08195 | 0.824514 | 7.75E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene08195 | -0.838847 | 2.25E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08195.t1 | MTR_7g085840 | 97.289 | 332 | 9 | 0 | 154 | 485 | 1 | 332 | 0.0 | 680 |
| MS.gene08195.t1 | MTR_5g031480 | 42.077 | 366 | 193 | 9 | 119 | 478 | 61 | 413 | 8.54e-93 | 288 |
| MS.gene08195.t1 | MTR_5g049790 | 42.021 | 376 | 191 | 11 | 105 | 478 | 83 | 433 | 6.01e-90 | 281 |
| MS.gene08195.t1 | MTR_7g103260 | 39.316 | 351 | 186 | 10 | 140 | 475 | 54 | 392 | 1.75e-70 | 230 |
| MS.gene08195.t1 | MTR_7g103270 | 37.815 | 357 | 193 | 9 | 140 | 480 | 55 | 398 | 2.07e-67 | 222 |
| MS.gene08195.t1 | MTR_1g061760 | 38.304 | 342 | 189 | 10 | 147 | 475 | 147 | 479 | 2.40e-64 | 216 |
| MS.gene08195.t1 | MTR_3g097310 | 35.770 | 383 | 214 | 11 | 114 | 480 | 125 | 491 | 1.54e-63 | 214 |
| MS.gene08195.t1 | MTR_3g106690 | 38.000 | 350 | 193 | 11 | 147 | 481 | 52 | 392 | 3.18e-62 | 208 |
| MS.gene08195.t1 | MTR_7g103150 | 36.134 | 357 | 190 | 12 | 140 | 475 | 141 | 480 | 8.04e-62 | 209 |
| MS.gene08195.t1 | MTR_4g100730 | 35.196 | 358 | 198 | 10 | 140 | 475 | 186 | 531 | 1.26e-61 | 210 |
| MS.gene08195.t1 | MTR_3g110198 | 36.565 | 361 | 183 | 14 | 140 | 475 | 250 | 589 | 5.55e-60 | 207 |
| MS.gene08195.t1 | MTR_4g115540 | 35.638 | 376 | 201 | 11 | 122 | 475 | 263 | 619 | 1.93e-58 | 204 |
| MS.gene08195.t1 | MTR_1g006600 | 35.754 | 358 | 190 | 13 | 140 | 475 | 243 | 582 | 5.56e-58 | 201 |
| MS.gene08195.t1 | MTR_1g090733 | 36.080 | 352 | 197 | 12 | 140 | 477 | 208 | 545 | 2.69e-57 | 199 |
| MS.gene08195.t1 | MTR_8g102840 | 35.278 | 360 | 190 | 13 | 140 | 475 | 265 | 605 | 7.06e-57 | 199 |
| MS.gene08195.t1 | MTR_3g110200 | 34.986 | 363 | 186 | 12 | 140 | 475 | 247 | 586 | 1.81e-56 | 197 |
| MS.gene08195.t1 | MTR_3g080690 | 34.133 | 375 | 206 | 11 | 128 | 480 | 89 | 444 | 4.24e-56 | 193 |
| MS.gene08195.t1 | MTR_5g031480 | 38.652 | 282 | 155 | 8 | 119 | 394 | 61 | 330 | 6.95e-56 | 189 |
| MS.gene08195.t1 | MTR_5g031480 | 39.007 | 282 | 152 | 9 | 119 | 393 | 61 | 329 | 2.91e-55 | 188 |
| MS.gene08195.t1 | MTR_3g081240 | 33.333 | 384 | 235 | 9 | 109 | 480 | 72 | 446 | 3.68e-55 | 191 |
| MS.gene08195.t1 | MTR_4g115530 | 33.596 | 381 | 212 | 13 | 117 | 475 | 24 | 385 | 9.95e-55 | 188 |
| MS.gene08195.t1 | MTR_4g115530 | 36.644 | 292 | 169 | 9 | 198 | 475 | 42 | 331 | 2.00e-52 | 181 |
| MS.gene08195.t1 | MTR_4g115460 | 32.877 | 365 | 208 | 11 | 140 | 482 | 115 | 464 | 5.27e-50 | 177 |
| MS.gene08195.t1 | MTR_5g049790 | 38.189 | 254 | 142 | 8 | 105 | 356 | 83 | 323 | 9.10e-46 | 162 |
| MS.gene08195.t1 | MTR_5g049790 | 39.167 | 240 | 131 | 8 | 119 | 356 | 114 | 340 | 8.55e-45 | 160 |
| MS.gene08195.t1 | MTR_4g115540 | 32.990 | 291 | 155 | 10 | 122 | 390 | 263 | 535 | 3.80e-31 | 126 |
| MS.gene08195.t1 | MTR_8g102840 | 32.117 | 274 | 144 | 12 | 140 | 389 | 265 | 520 | 1.14e-28 | 119 |
| MS.gene08195.t1 | MTR_5g081290 | 27.852 | 298 | 133 | 11 | 189 | 478 | 28 | 251 | 1.64e-27 | 111 |
| MS.gene08195.t1 | MTR_2g084245 | 27.532 | 316 | 195 | 9 | 186 | 471 | 115 | 426 | 3.07e-25 | 108 |
| MS.gene08195.t1 | MTR_4g057500 | 26.814 | 317 | 196 | 11 | 186 | 471 | 133 | 444 | 6.76e-23 | 101 |
| MS.gene08195.t1 | MTR_8g096160 | 25.484 | 310 | 205 | 8 | 186 | 471 | 77 | 384 | 8.06e-22 | 97.8 |
| MS.gene08195.t1 | MTR_8g096140 | 25.161 | 310 | 206 | 8 | 186 | 471 | 77 | 384 | 1.45e-20 | 94.4 |
| MS.gene08195.t1 | MTR_3g037720 | 24.579 | 297 | 196 | 9 | 203 | 478 | 188 | 477 | 2.01e-17 | 85.1 |
| MS.gene08195.t1 | MTR_7g087100 | 26.117 | 291 | 174 | 11 | 204 | 467 | 190 | 466 | 1.17e-15 | 79.7 |
| MS.gene08195.t1 | MTR_6g027310 | 26.421 | 299 | 175 | 11 | 198 | 467 | 179 | 461 | 3.38e-14 | 75.1 |
| MS.gene08195.t1 | MTR_4g084200 | 24.638 | 276 | 180 | 10 | 205 | 457 | 163 | 433 | 4.08e-14 | 74.7 |
| MS.gene08195.t1 | MTR_4g077920 | 25.685 | 292 | 169 | 12 | 196 | 457 | 173 | 446 | 4.90e-14 | 74.7 |
| MS.gene08195.t1 | MTR_4g077920 | 25.685 | 292 | 169 | 12 | 196 | 457 | 173 | 446 | 5.48e-14 | 74.7 |
| MS.gene08195.t1 | MTR_1g029350 | 25.000 | 352 | 211 | 12 | 157 | 471 | 73 | 408 | 7.66e-14 | 73.9 |
| MS.gene08195.t1 | MTR_4g077920 | 26.378 | 254 | 146 | 10 | 232 | 457 | 148 | 388 | 1.44e-13 | 73.2 |
| MS.gene08195.t1 | MTR_4g084200 | 25.000 | 252 | 162 | 9 | 205 | 433 | 163 | 410 | 2.85e-12 | 68.9 |
| MS.gene08195.t1 | MTR_4g084200 | 25.000 | 252 | 162 | 9 | 205 | 433 | 163 | 410 | 3.77e-12 | 68.6 |
| MS.gene08195.t1 | MTR_8g080490 | 23.448 | 290 | 191 | 8 | 205 | 471 | 117 | 398 | 5.74e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08195.t1 | AT4G38040 | 45.058 | 344 | 174 | 8 | 138 | 474 | 84 | 419 | 3.36e-94 | 292 |
| MS.gene08195.t1 | AT4G38040 | 42.500 | 320 | 169 | 8 | 138 | 450 | 84 | 395 | 2.99e-76 | 245 |
| MS.gene08195.t1 | AT4G16745 | 36.524 | 397 | 214 | 13 | 101 | 472 | 141 | 524 | 3.86e-70 | 233 |
| MS.gene08195.t1 | AT5G03795 | 38.674 | 362 | 193 | 11 | 132 | 480 | 170 | 515 | 2.28e-65 | 220 |
| MS.gene08195.t1 | AT4G16745 | 36.504 | 389 | 209 | 13 | 101 | 464 | 141 | 516 | 8.39e-65 | 220 |
| MS.gene08195.t1 | AT5G37000 | 37.853 | 354 | 188 | 11 | 140 | 475 | 208 | 547 | 5.17e-64 | 217 |
| MS.gene08195.t1 | AT5G11130 | 34.417 | 369 | 203 | 10 | 137 | 483 | 128 | 479 | 8.52e-59 | 201 |
| MS.gene08195.t1 | AT5G11610 | 36.182 | 351 | 198 | 13 | 140 | 475 | 202 | 541 | 4.94e-58 | 201 |
| MS.gene08195.t1 | AT4G32790 | 36.314 | 369 | 187 | 14 | 136 | 475 | 240 | 589 | 1.49e-57 | 201 |
| MS.gene08195.t1 | AT4G32790 | 36.314 | 369 | 187 | 14 | 136 | 475 | 240 | 589 | 1.49e-57 | 201 |
| MS.gene08195.t1 | AT4G32790 | 36.314 | 369 | 187 | 14 | 136 | 475 | 240 | 589 | 1.49e-57 | 201 |
| MS.gene08195.t1 | AT5G11130 | 36.508 | 315 | 177 | 8 | 186 | 483 | 27 | 335 | 1.56e-57 | 194 |
| MS.gene08195.t1 | AT5G19670 | 34.262 | 359 | 195 | 11 | 140 | 475 | 263 | 603 | 3.05e-57 | 200 |
| MS.gene08195.t1 | AT5G19670 | 34.262 | 359 | 195 | 11 | 140 | 475 | 263 | 603 | 3.05e-57 | 200 |
| MS.gene08195.t1 | AT5G25310 | 33.791 | 364 | 209 | 9 | 137 | 481 | 130 | 480 | 1.24e-55 | 193 |
| MS.gene08195.t1 | AT5G25820 | 33.795 | 361 | 196 | 12 | 140 | 475 | 306 | 648 | 3.46e-54 | 192 |
| MS.gene08195.t1 | AT5G20260 | 34.066 | 364 | 216 | 12 | 127 | 475 | 106 | 460 | 7.93e-54 | 187 |
| MS.gene08195.t1 | AT3G42180 | 36.246 | 309 | 181 | 7 | 184 | 478 | 31 | 337 | 2.24e-53 | 183 |
| MS.gene08195.t1 | AT3G07620 | 33.604 | 369 | 215 | 11 | 130 | 481 | 104 | 459 | 8.30e-53 | 185 |
| MS.gene08195.t1 | AT5G20260 | 34.897 | 341 | 198 | 12 | 153 | 478 | 27 | 358 | 8.84e-53 | 182 |
| MS.gene08195.t1 | AT3G42180 | 33.515 | 367 | 212 | 10 | 131 | 478 | 113 | 466 | 9.54e-53 | 185 |
| MS.gene08195.t1 | AT5G20260 | 34.706 | 340 | 198 | 12 | 154 | 478 | 1 | 331 | 3.44e-52 | 180 |
| MS.gene08195.t1 | AT5G33290 | 32.394 | 355 | 218 | 10 | 138 | 475 | 144 | 493 | 3.32e-49 | 176 |
| MS.gene08195.t1 | AT5G11610 | 31.907 | 257 | 151 | 11 | 140 | 382 | 202 | 448 | 2.45e-25 | 108 |
| MS.gene08195.t1 | AT2G28110 | 25.472 | 318 | 201 | 9 | 186 | 471 | 120 | 433 | 2.10e-22 | 100 |
| MS.gene08195.t1 | AT5G22940 | 26.687 | 326 | 187 | 14 | 186 | 472 | 136 | 448 | 8.72e-22 | 98.2 |
| MS.gene08195.t1 | AT5G22940 | 26.462 | 325 | 189 | 12 | 186 | 472 | 165 | 477 | 1.12e-21 | 98.2 |
| MS.gene08195.t1 | AT1G27440 | 24.839 | 310 | 201 | 9 | 186 | 468 | 73 | 377 | 9.30e-20 | 91.7 |
| MS.gene08195.t1 | AT5G11610 | 36.923 | 130 | 73 | 4 | 140 | 264 | 202 | 327 | 2.26e-17 | 84.0 |
| MS.gene08195.t1 | AT3G03650 | 24.221 | 417 | 254 | 17 | 108 | 472 | 69 | 475 | 2.29e-16 | 82.0 |
| MS.gene08195.t1 | AT1G74680 | 26.642 | 274 | 163 | 10 | 187 | 433 | 133 | 395 | 6.06e-15 | 77.4 |
| MS.gene08195.t1 | AT5G44930 | 26.966 | 267 | 171 | 10 | 205 | 454 | 129 | 388 | 6.76e-15 | 77.0 |
| MS.gene08195.t1 | AT5G44930 | 26.966 | 267 | 171 | 10 | 205 | 454 | 129 | 388 | 6.76e-15 | 77.0 |
| MS.gene08195.t1 | AT5G44930 | 26.953 | 256 | 163 | 10 | 205 | 443 | 129 | 377 | 3.74e-13 | 71.2 |
| MS.gene08195.t1 | AT3G45400 | 26.408 | 284 | 180 | 12 | 205 | 467 | 157 | 432 | 8.51e-13 | 70.9 |
| MS.gene08195.t1 | AT2G35100 | 25.182 | 274 | 176 | 11 | 205 | 457 | 130 | 395 | 2.56e-11 | 65.9 |
Find 97 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACGGTTCAGGAAAATTTA+AGG | 0.187479 | 7.3:-22824212 | MS.gene08195:CDS |
| GGAGAAGGAAGAATGAATTT+TGG | 0.206250 | 7.3:+22826205 | None:intergenic |
| ATATGGTTATGTATGAATTA+TGG | 0.236996 | 7.3:-22822902 | MS.gene08195:CDS |
| AAGTTCTATACCTATTGTTT+TGG | 0.284491 | 7.3:-22822871 | MS.gene08195:CDS |
| TGACTTTGATGCATTCTATA+TGG | 0.287970 | 7.3:-22822919 | MS.gene08195:CDS |
| TTCCAATTGGGTCATGGCCT+TGG | 0.288004 | 7.3:-22826118 | MS.gene08195:CDS |
| ATGCATGCCTACCACAAATT+TGG | 0.291197 | 7.3:-22823697 | MS.gene08195:CDS |
| CGTAGACTTGCTATGGAAAA+AGG | 0.292417 | 7.3:+22823953 | None:intergenic |
| CCAACCTTGTTTCATCAAAT+AGG | 0.304692 | 7.3:-22823655 | MS.gene08195:intron |
| ATTGGTGATTCATTATACTA+TGG | 0.326408 | 7.3:-22823149 | MS.gene08195:CDS |
| CATACCCTTTGAGCTGGATT+GGG | 0.333824 | 7.3:+22826069 | None:intergenic |
| CAAGTCTCATACTTTCCAAT+TGG | 0.342232 | 7.3:-22826131 | MS.gene08195:CDS |
| ATAGAAGAGAATGGAAAATA+TGG | 0.344052 | 7.3:+22826306 | None:intergenic |
| GCATACCCTTTGAGCTGGAT+TGG | 0.354741 | 7.3:+22826068 | None:intergenic |
| CATAGTCTCTAATGAAATCT+TGG | 0.366128 | 7.3:+22823900 | None:intergenic |
| CTGAAAGGTATAGTTAGTTC+TGG | 0.366270 | 7.3:-22823011 | MS.gene08195:CDS |
| CCATACGGTGATGAGTTATT+AGG | 0.385062 | 7.3:-22823221 | MS.gene08195:CDS |
| AAGTGGTTATATTGCTCATA+AGG | 0.385596 | 7.3:-22823720 | MS.gene08195:CDS |
| GGCAAACCCCGTTGACTTTG+TGG | 0.400455 | 7.3:+22826094 | None:intergenic |
| ATGATTGTTGTGTAAGGTAT+TGG | 0.414772 | 7.3:+22826168 | None:intergenic |
| AGTATGAGAGTGTTGGTAAA+GGG | 0.421490 | 7.3:+22826390 | None:intergenic |
| CCTTGGACCACAAAGTCAAC+GGG | 0.437971 | 7.3:-22826101 | MS.gene08195:CDS |
| GTTAAGAGAGCTAAGGTAGT+TGG | 0.438077 | 7.3:+22826328 | None:intergenic |
| TATGTGGCATGTCATTCAAT+TGG | 0.444024 | 7.3:-22823818 | MS.gene08195:CDS |
| TCATCAAGTTATTTCTTAAG+TGG | 0.445359 | 7.3:-22823737 | MS.gene08195:CDS |
| AGAAGAATGTGTTGAAGGTA+AGG | 0.445791 | 7.3:-22822971 | MS.gene08195:CDS |
| TAATAGTTGGCAATGATCAC+TGG | 0.452560 | 7.3:+22823119 | None:intergenic |
| AAGTCTCATACTTTCCAATT+GGG | 0.455013 | 7.3:-22826130 | MS.gene08195:CDS |
| TTTCTTGAAGTAACTTTCAC+TGG | 0.456582 | 7.3:+22824036 | None:intergenic |
| ATAGTAAGCATAGAAGAGAA+TGG | 0.460134 | 7.3:+22826297 | None:intergenic |
| GTCCAAGGCCATGACCCAAT+TGG | 0.469081 | 7.3:+22826116 | None:intergenic |
| CTAGAAACATATCTCTATCA+TGG | 0.469141 | 7.3:+22824173 | None:intergenic |
| GTTAAGTGAGGGGTTGGAGA+AGG | 0.469191 | 7.3:+22826190 | None:intergenic |
| TGTAAGGTATTGGTTAAGTG+AGG | 0.473954 | 7.3:+22826178 | None:intergenic |
| AAAAGGAAGGTCATAATAGT+TGG | 0.482102 | 7.3:+22823106 | None:intergenic |
| ATGGCATTGAATTTCACATC+AGG | 0.483309 | 7.3:+22823773 | None:intergenic |
| TTCACTGGCATAATTGCCAC+CGG | 0.483530 | 7.3:+22824051 | None:intergenic |
| TGATGAACAAACAACTTGAA+TGG | 0.484985 | 7.3:+22823754 | None:intergenic |
| CCACCCCAATCCAGCTCAAA+GGG | 0.486308 | 7.3:-22826073 | MS.gene08195:intron |
| CCCGTTGACTTTGTGGTCCA+AGG | 0.486935 | 7.3:+22826101 | None:intergenic |
| GAGTATGAGAGTGTTGGTAA+AGG | 0.488561 | 7.3:+22826389 | None:intergenic |
| CTATTTGATGAAACAAGGTT+GGG | 0.490527 | 7.3:+22823656 | None:intergenic |
| TGATTCACAAGTATCCGTAT+TGG | 0.495104 | 7.3:-22823868 | MS.gene08195:CDS |
| AGAGTGGATTGGTGGTTATG+TGG | 0.497762 | 7.3:+22826247 | None:intergenic |
| CCTATTTGATGAAACAAGGT+TGG | 0.500790 | 7.3:+22823655 | None:intergenic |
| CCACCGGTGCGGTTCCAATA+CGG | 0.501589 | 7.3:+22823854 | None:intergenic |
| GTATTGGTTAAGTGAGGGGT+TGG | 0.505320 | 7.3:+22826184 | None:intergenic |
| CATACTTTCCAATTGGGTCA+TGG | 0.508311 | 7.3:-22826124 | MS.gene08195:CDS |
| CAATTCAAAATATCTGCAAA+AGG | 0.508336 | 7.3:+22823089 | None:intergenic |
| ATCATGCCGTAGACTTGCTA+TGG | 0.511496 | 7.3:+22823946 | None:intergenic |
| GTAAGGTATTGGTTAAGTGA+GGG | 0.513043 | 7.3:+22826179 | None:intergenic |
| TGAAGTTAAGAGTGGATTGG+TGG | 0.513765 | 7.3:+22826239 | None:intergenic |
| TGATGATTTGAAGTTAAGAG+TGG | 0.517478 | 7.3:+22826231 | None:intergenic |
| TCGACAAGATTTATCCGTAC+TGG | 0.518253 | 7.3:+22823296 | None:intergenic |
| GGTAATAGCACATTTGCAAA+AGG | 0.529147 | 7.3:+22824088 | None:intergenic |
| GAGTGTTGGTAAAGGGAAGA+AGG | 0.532800 | 7.3:+22826397 | None:intergenic |
| TTCAATTGGAAGGTCTGCTA+TGG | 0.532886 | 7.3:-22823804 | MS.gene08195:CDS |
| GCCTTGGACCACAAAGTCAA+CGG | 0.533654 | 7.3:-22826102 | MS.gene08195:CDS |
| GCATGATCGTCGAGTTGGTG+TGG | 0.534409 | 7.3:-22823930 | MS.gene08195:CDS |
| GAAGTGAACACAGCACGTAT+TGG | 0.536936 | 7.3:-22823167 | MS.gene08195:CDS |
| GAAGAATGTGTTGAAGGTAA+GGG | 0.537595 | 7.3:-22822970 | MS.gene08195:CDS |
| ATTTGAAGTTAAGAGTGGAT+TGG | 0.541977 | 7.3:+22826236 | None:intergenic |
| TTCTTGGCCAAATTTGTGGT+AGG | 0.544146 | 7.3:+22823690 | None:intergenic |
| ATAAAAGTGATCCGCGCCAC+CGG | 0.547434 | 7.3:+22823838 | None:intergenic |
| ATCAGAATGATTGTTGTGTA+AGG | 0.547521 | 7.3:+22826162 | None:intergenic |
| GAGAAGTGAATTCGCCAGTA+CGG | 0.551348 | 7.3:-22823310 | MS.gene08195:CDS |
| GCTACAGAAGAATGTGTTGA+AGG | 0.551649 | 7.3:-22822976 | MS.gene08195:CDS |
| CCTAATAACTCATCACCGTA+TGG | 0.554944 | 7.3:+22823221 | None:intergenic |
| GGATAAATCTTGTCGAGACA+TGG | 0.555807 | 7.3:-22823289 | MS.gene08195:CDS |
| GCCACCCCAATCCAGCTCAA+AGG | 0.556511 | 7.3:-22826074 | MS.gene08195:CDS |
| TTGGAACCGCACCGGTGGCG+CGG | 0.557524 | 7.3:-22823849 | MS.gene08195:CDS |
| TCAAAATATCTGCAAAAGGA+AGG | 0.557935 | 7.3:+22823093 | None:intergenic |
| TTTGATGAAACAAGGTTGGG+TGG | 0.562781 | 7.3:+22823659 | None:intergenic |
| TACTGGCGAATTCACTTCTC+CGG | 0.566201 | 7.3:+22823313 | None:intergenic |
| CCCTTTGAGCTGGATTGGGG+TGG | 0.566358 | 7.3:+22826073 | None:intergenic |
| CTACGGCATGATCGTCGAGT+TGG | 0.573970 | 7.3:-22823935 | MS.gene08195:CDS |
| ATACCCTTTGAGCTGGATTG+GGG | 0.576758 | 7.3:+22826070 | None:intergenic |
| ACAGAAATCTTTGTTCACAA+TGG | 0.577531 | 7.3:-22823257 | MS.gene08195:CDS |
| CATGATCGTCGAGTTGGTGT+GGG | 0.578419 | 7.3:-22823929 | MS.gene08195:CDS |
| AAATATGGTTAAGAGAGCTA+AGG | 0.581380 | 7.3:+22826321 | None:intergenic |
| CCGTATTGGAACCGCACCGG+TGG | 0.597029 | 7.3:-22823854 | MS.gene08195:CDS |
| TGGCATGTCATTCAATTGGA+AGG | 0.599398 | 7.3:-22823814 | MS.gene08195:CDS |
| GGTACCTATTTGATGAAACA+AGG | 0.607743 | 7.3:+22823651 | None:intergenic |
| TATCCGTATTGGAACCGCAC+CGG | 0.608918 | 7.3:-22823857 | MS.gene08195:CDS |
| TAGAATGCATCAAAGTCAAG+TGG | 0.609625 | 7.3:+22822924 | None:intergenic |
| TAAGGTATTGGTTAAGTGAG+GGG | 0.610496 | 7.3:+22826180 | None:intergenic |
| GATCGTCGAGTTGGTGTGGG+AGG | 0.616478 | 7.3:-22823926 | MS.gene08195:CDS |
| AAGGGAAGAAGGACGAAGCA+TGG | 0.619694 | 7.3:+22826408 | None:intergenic |
| CAACATGAGTATGAGAGTGT+TGG | 0.624364 | 7.3:+22826383 | None:intergenic |
| AGTGATCCGCGCCACCGGTG+CGG | 0.629143 | 7.3:+22823843 | None:intergenic |
| ATTGGTGGTTATGTGGACGA+TGG | 0.634173 | 7.3:+22826254 | None:intergenic |
| AATGCATCAAAGTCAAGTGG+AGG | 0.658492 | 7.3:+22822927 | None:intergenic |
| TTACCCGTGAAAACTGAACC+CGG | 0.660789 | 7.3:-22824070 | MS.gene08195:CDS |
| TCACTGGCATAATTGCCACC+GGG | 0.685601 | 7.3:+22824052 | None:intergenic |
| CTTGGACCACAAAGTCAACG+GGG | 0.749981 | 7.3:-22826100 | MS.gene08195:CDS |
| ATGGTGTGTGAAGATGATTG+AGG | 0.755003 | 7.3:+22826273 | None:intergenic |
| CCCGTGAAAACTGAACCCGG+TGG | 0.789625 | 7.3:-22824067 | MS.gene08195:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATAATTAAAATGACA+TGG | - | chr7.3:22824414-22824433 | MS.gene08195:intron | 10.0% |
| !! | ATTGAAATTTAAAAAAGAAT+TGG | + | chr7.3:22824355-22824374 | None:intergenic | 10.0% |
| !!! | AAAAAGTCAAAAAAATATTT+TGG | - | chr7.3:22824243-22824262 | MS.gene08195:CDS | 10.0% |
| !!! | AAAAGTCAAAAAAATATTTT+GGG | - | chr7.3:22824244-22824263 | MS.gene08195:intron | 10.0% |
| !!! | AAATTAACAATTTTGAAAAT+AGG | - | chr7.3:22824596-22824615 | MS.gene08195:intron | 10.0% |
| !!! | AATTAACAATTTTGAAAATA+GGG | - | chr7.3:22824597-22824616 | MS.gene08195:intron | 10.0% |
| !!! | ATTAATTTAAAATCTAGTTT+TGG | + | chr7.3:22825781-22825800 | None:intergenic | 10.0% |
| !!! | ATTTTTTTGACTTTTTAAAT+AGG | + | chr7.3:22824239-22824258 | None:intergenic | 10.0% |
| !!! | TTAACAATTTTAAAAATAGA+GGG | + | chr7.3:22824177-22824196 | None:intergenic | 10.0% |
| !!! | TTTTTAAAATTGTTAACTTT+TGG | - | chr7.3:22824181-22824200 | MS.gene08195:CDS | 10.0% |
| !!! | TTTTTTTGACTTTTTAAATA+GGG | + | chr7.3:22824238-22824257 | None:intergenic | 10.0% |
| !! | ATATTAGAATAAAATAATGC+AGG | + | chr7.3:22823876-22823895 | None:intergenic | 15.0% |
| !! | TATTAGAATAAAATAATGCA+GGG | + | chr7.3:22823875-22823894 | None:intergenic | 15.0% |
| !! | TTATAAGTAGAGATTATAAT+CGG | - | chr7.3:22824817-22824836 | MS.gene08195:intron | 15.0% |
| !!! | AAAAAGTCAACAAAATATTT+TGG | + | chr7.3:22824532-22824551 | None:intergenic | 15.0% |
| !!! | AATATTGTTGTTTGTTAATA+TGG | - | chr7.3:22823245-22823264 | MS.gene08195:CDS | 15.0% |
| !!! | ACTAGATTTTAAATTAATAG+AGG | - | chr7.3:22825783-22825802 | MS.gene08195:intron | 15.0% |
| !!! | ATTAACAATTTTGAAAATAG+GGG | - | chr7.3:22824598-22824617 | MS.gene08195:intron | 15.0% |
| !!! | ATTGTATATTTTCTTTTTTC+TGG | - | chr7.3:22823830-22823849 | MS.gene08195:CDS | 15.0% |
| !!! | GTTAACAATTTTAAAAATAG+AGG | + | chr7.3:22824178-22824197 | None:intergenic | 15.0% |
| !!! | TCATATTATCATTCATTTTA+AGG | - | chr7.3:22823325-22823344 | MS.gene08195:CDS | 15.0% |
| !!! | TTCTAAATTTTGTTTTTTGA+AGG | - | chr7.3:22824736-22824755 | MS.gene08195:intron | 15.0% |
| !!! | TTTTTTGACTTTTTAAATAG+GGG | + | chr7.3:22824237-22824256 | None:intergenic | 15.0% |
| !! | AATAAAACATGGTAGAAATT+AGG | - | chr7.3:22823955-22823974 | MS.gene08195:CDS | 20.0% |
| !! | ATAAAACATGGTAGAAATTA+GGG | - | chr7.3:22823956-22823975 | MS.gene08195:CDS | 20.0% |
| !! | ATAAGACAAACATAATTATG+TGG | - | chr7.3:22823540-22823559 | MS.gene08195:intron | 20.0% |
| !! | ATATGGTTATGTATGAATTA+TGG | - | chr7.3:22826364-22826383 | MS.gene08195:CDS | 20.0% |
| !! | TACAATATTGCAAACTAAAA+TGG | + | chr7.3:22823816-22823835 | None:intergenic | 20.0% |
| !! | TCGATAAATTTGCATTAAAA+AGG | + | chr7.3:22824937-22824956 | None:intergenic | 20.0% |
| !! | TTATTCTAATATTCCTAGAT+TGG | - | chr7.3:22823884-22823903 | MS.gene08195:CDS | 20.0% |
| !! | TTATTGAAAAAGATTCTGAA+AGG | - | chr7.3:22826240-22826259 | MS.gene08195:CDS | 20.0% |
| !! | TTGTAGACTAAAATAAAACA+TGG | - | chr7.3:22823944-22823963 | MS.gene08195:CDS | 20.0% |
| !!! | AAAAAATCGGTTTTAGAAAT+AGG | + | chr7.3:22824211-22824230 | None:intergenic | 20.0% |
| !!! | AAAAATCGGTTTTAGAAATA+GGG | + | chr7.3:22824210-22824229 | None:intergenic | 20.0% |
| !!! | ATATTTTGGGAATAAAAAGA+TGG | - | chr7.3:22824257-22824276 | MS.gene08195:intron | 20.0% |
| !!! | ATCAACATGTTTTATATCAT+CGG | - | chr7.3:22825702-22825721 | MS.gene08195:intron | 20.0% |
| !!! | GGTATAGAATTTTGAAAAAT+TGG | + | chr7.3:22824916-22824935 | None:intergenic | 20.0% |
| !!! | TATTATCATTCATTTTAAGG+TGG | - | chr7.3:22823328-22823347 | MS.gene08195:CDS | 20.0% |
| !!! | TTAACAATTTTGAAAATAGG+GGG | - | chr7.3:22824599-22824618 | MS.gene08195:intron | 20.0% |
| !!! | TTCAGAATCTTTTTCAATAA+AGG | + | chr7.3:22826240-22826259 | None:intergenic | 20.0% |
| !!! | TTTGAAACTTTCTATTTTGA+TGG | + | chr7.3:22823731-22823750 | None:intergenic | 20.0% |
| ! | AAGAATTGGATTTATTTGAG+TGG | + | chr7.3:22824341-22824360 | None:intergenic | 25.0% |
| ! | AATATTCCTAGATTGGTAAA+TGG | - | chr7.3:22823891-22823910 | MS.gene08195:CDS | 25.0% |
| ! | ACATTTCCAAAAATAGAGAA+AGG | + | chr7.3:22823567-22823586 | None:intergenic | 25.0% |
| ! | ATAGAAGAGAATGGAAAATA+TGG | + | chr7.3:22822963-22822982 | None:intergenic | 25.0% |
| ! | CAATTCAAAATATCTGCAAA+AGG | + | chr7.3:22826180-22826199 | None:intergenic | 25.0% |
| ! | CATTAGTTAAACAATTTCCA+AGG | + | chr7.3:22823459-22823478 | None:intergenic | 25.0% |
| ! | TAAATAGGGGATCAAAAAAT+CGG | + | chr7.3:22824224-22824243 | None:intergenic | 25.0% |
| ! | TAATAAATGTACCTAGAAAG+AGG | + | chr7.3:22825648-22825667 | None:intergenic | 25.0% |
| !! | AAGTTCTATACCTATTGTTT+TGG | - | chr7.3:22826395-22826414 | MS.gene08195:CDS | 25.0% |
| !! | AGTTCTATACCTATTGTTTT+GGG | - | chr7.3:22826396-22826415 | MS.gene08195:CDS | 25.0% |
| !! | ATTGGTGATTCATTATACTA+TGG | - | chr7.3:22826117-22826136 | MS.gene08195:CDS | 25.0% |
| !! | GTTTTTCGTTTATGATACTT+GGG | + | chr7.3:22824305-22824324 | None:intergenic | 25.0% |
| !! | TGTTTTTCGTTTATGATACT+TGG | + | chr7.3:22824306-22824325 | None:intergenic | 25.0% |
| !! | TTGGATCTTTTGTAATGAAA+TGG | + | chr7.3:22825270-22825289 | None:intergenic | 25.0% |
| !!! | AAAAAACCGGTTTTAGAAAT+AGG | - | chr7.3:22824565-22824584 | MS.gene08195:intron | 25.0% |
| !!! | AAAAACCGGTTTTAGAAATA+GGG | - | chr7.3:22824566-22824585 | MS.gene08195:intron | 25.0% |
| !!! | AAAATCGGTTTTAGAAATAG+GGG | + | chr7.3:22824209-22824228 | None:intergenic | 25.0% |
| !!! | AAACTTTCTATTTTGATGGA+AGG | + | chr7.3:22823727-22823746 | None:intergenic | 25.0% |
| !!! | CTCCTATTTTTAATCACTAA+CGG | + | chr7.3:22825816-22825835 | None:intergenic | 25.0% |
| !!! | CTTTTGCAGATATTTTGAAT+TGG | - | chr7.3:22826178-22826197 | MS.gene08195:CDS | 25.0% |
| !!! | TCATCAAGTTATTTCTTAAG+TGG | - | chr7.3:22825529-22825548 | MS.gene08195:intron | 25.0% |
| !!! | TTGTTGACTTTTTAAACAGA+GGG | - | chr7.3:22824539-22824558 | MS.gene08195:intron | 25.0% |
| !!! | TTTGCTTTTGTAAAAATGAC+AGG | - | chr7.3:22825911-22825930 | MS.gene08195:intron | 25.0% |
| !!! | TTTGTTGACTTTTTAAACAG+AGG | - | chr7.3:22824538-22824557 | MS.gene08195:intron | 25.0% |
| !!! | TTTTTTCTGGTAGAAAAAGA+GGG | - | chr7.3:22823843-22823862 | MS.gene08195:CDS | 25.0% |
| AAAAGGAAGGTCATAATAGT+TGG | + | chr7.3:22826163-22826182 | None:intergenic | 30.0% | |
| AAATATGGTTAAGAGAGCTA+AGG | + | chr7.3:22822948-22822967 | None:intergenic | 30.0% | |
| AAGTCTCATACTTTCCAATT+GGG | - | chr7.3:22823136-22823155 | MS.gene08195:CDS | 30.0% | |
| AAGTGGTTATATTGCTCATA+AGG | - | chr7.3:22825546-22825565 | MS.gene08195:intron | 30.0% | |
| AATAAAATAATGCAGGGCTT+TGG | + | chr7.3:22823869-22823888 | None:intergenic | 30.0% | |
| ACAGAAATCTTTGTTCACAA+TGG | - | chr7.3:22826009-22826028 | MS.gene08195:intron | 30.0% | |
| AGTCTACAACCATTTCTTAT+AGG | + | chr7.3:22823933-22823952 | None:intergenic | 30.0% | |
| ATAGTAAGCATAGAAGAGAA+TGG | + | chr7.3:22822972-22822991 | None:intergenic | 30.0% | |
| ATCAGAATGATTGTTGTGTA+AGG | + | chr7.3:22823107-22823126 | None:intergenic | 30.0% | |
| ATGATTGTTGTGTAAGGTAT+TGG | + | chr7.3:22823101-22823120 | None:intergenic | 30.0% | |
| CATAGTCTCTAATGAAATCT+TGG | + | chr7.3:22825369-22825388 | None:intergenic | 30.0% | |
| CGTTAGTGATTAAAAATAGG+AGG | - | chr7.3:22825814-22825833 | MS.gene08195:intron | 30.0% | |
| CTAGAAACATATCTCTATCA+TGG | + | chr7.3:22825096-22825115 | None:intergenic | 30.0% | |
| CTATTTGATGAAACAAGGTT+GGG | + | chr7.3:22825613-22825632 | None:intergenic | 30.0% | |
| CTCCGTTAGTGATTAAAAAT+AGG | - | chr7.3:22825811-22825830 | MS.gene08195:intron | 30.0% | |
| CTTCATGTCATTAATGAACA+TGG | - | chr7.3:22824482-22824501 | MS.gene08195:intron | 30.0% | |
| GTCTACAACCATTTCTTATA+GGG | + | chr7.3:22823932-22823951 | None:intergenic | 30.0% | |
| TCAAAATATCTGCAAAAGGA+AGG | + | chr7.3:22826176-22826195 | None:intergenic | 30.0% | |
| TGACTTTGATGCATTCTATA+TGG | - | chr7.3:22826347-22826366 | MS.gene08195:CDS | 30.0% | |
| TGATGAACAAACAACTTGAA+TGG | + | chr7.3:22825515-22825534 | None:intergenic | 30.0% | |
| TGGTTGTAAAAATGATCTCA+TGG | + | chr7.3:22823418-22823437 | None:intergenic | 30.0% | |
| TGTTAAATGATATGCCATGT+AGG | - | chr7.3:22824445-22824464 | MS.gene08195:intron | 30.0% | |
| TTTCTTGAAGTAACTTTCAC+TGG | + | chr7.3:22825233-22825252 | None:intergenic | 30.0% | |
| ! | AAGTTCTGTTTTCATGTTAG+AGG | - | chr7.3:22826072-22826091 | MS.gene08195:intron | 30.0% |
| ! | ATTTGAAGTTAAGAGTGGAT+TGG | + | chr7.3:22823033-22823052 | None:intergenic | 30.0% |
| ! | GTTTGTTAATATGGTTTGTG+TGG | - | chr7.3:22823254-22823273 | MS.gene08195:CDS | 30.0% |
| ! | TGATGATTTGAAGTTAAGAG+TGG | + | chr7.3:22823038-22823057 | None:intergenic | 30.0% |
| ! | TTTTTAATCACTAACGGAGT+TGG | + | chr7.3:22825810-22825829 | None:intergenic | 30.0% |
| !! | AAGAAAAGATCTGCTTTTGT+TGG | + | chr7.3:22825289-22825308 | None:intergenic | 30.0% |
| !! | GTTCTATACCTATTGTTTTG+GGG | - | chr7.3:22826397-22826416 | MS.gene08195:CDS | 30.0% |
| !! | TGAGATCATTTTTACAACCA+TGG | - | chr7.3:22823418-22823437 | MS.gene08195:intron | 30.0% |
| !!! | AAAACCGGTTTTAGAAATAG+GGG | - | chr7.3:22824567-22824586 | MS.gene08195:intron | 30.0% |
| !!! | CATATTTTTAGACCCAAAAG+TGG | + | chr7.3:22825748-22825767 | None:intergenic | 30.0% |
| !!! | CTCTATTTTTGGAAATGTTG+TGG | - | chr7.3:22823569-22823588 | MS.gene08195:intron | 30.0% |
| !!! | CTTTTTTCTGGTAGAAAAAG+AGG | - | chr7.3:22823842-22823861 | MS.gene08195:CDS | 30.0% |
| !!! | TTCTATACCTATTGTTTTGG+GGG | - | chr7.3:22826398-22826417 | MS.gene08195:CDS | 30.0% |
| AAACAGAGGGATCAAAAAAC+CGG | - | chr7.3:22824552-22824571 | MS.gene08195:intron | 35.0% | |
| AACCTAACACAGCTGATTAA+TGG | + | chr7.3:22824844-22824863 | None:intergenic | 35.0% | |
| ACATGGCACATTATTTAGAG+AGG | - | chr7.3:22824499-22824518 | MS.gene08195:intron | 35.0% | |
| ACTGACGCAATCTATCTATA+AGG | - | chr7.3:22823767-22823786 | MS.gene08195:CDS | 35.0% | |
| AGAAGAATGTGTTGAAGGTA+AGG | - | chr7.3:22826295-22826314 | MS.gene08195:CDS | 35.0% | |
| ATGTGTAATTGAGATGAAGC+TGG | - | chr7.3:22823680-22823699 | MS.gene08195:CDS | 35.0% | |
| ATGTTGATGTCGAATCAATC+AGG | + | chr7.3:22825690-22825709 | None:intergenic | 35.0% | |
| CAAGTCTCATACTTTCCAAT+TGG | - | chr7.3:22823135-22823154 | MS.gene08195:CDS | 35.0% | |
| CCTATTTGATGAAACAAGGT+TGG | + | chr7.3:22825614-22825633 | None:intergenic | 35.0% | |
| GAAGAATGTGTTGAAGGTAA+GGG | - | chr7.3:22826296-22826315 | MS.gene08195:CDS | 35.0% | |
| GGAAGACTAAAAACACCATA+CGG | - | chr7.3:22826030-22826049 | MS.gene08195:intron | 35.0% | |
| GGTAATAGCACATTTGCAAA+AGG | + | chr7.3:22825181-22825200 | None:intergenic | 35.0% | |
| GGTACCTATTTGATGAAACA+AGG | + | chr7.3:22825618-22825637 | None:intergenic | 35.0% | |
| TAATAGTTGGCAATGATCAC+TGG | + | chr7.3:22826150-22826169 | None:intergenic | 35.0% | |
| TACCATTTCTTCCTCTTTCT+AGG | - | chr7.3:22825634-22825653 | MS.gene08195:intron | 35.0% | |
| TACCTAGAAAGAGGAAGAAA+TGG | + | chr7.3:22825639-22825658 | None:intergenic | 35.0% | |
| TAGAATGCATCAAAGTCAAG+TGG | + | chr7.3:22826345-22826364 | None:intergenic | 35.0% | |
| TATGAATCCCCCAAAACAAT+AGG | + | chr7.3:22826408-22826427 | None:intergenic | 35.0% | |
| TATGTGGCATGTCATTCAAT+TGG | - | chr7.3:22825448-22825467 | MS.gene08195:intron | 35.0% | |
| TGACGGTTCAGGAAAATTTA+AGG | - | chr7.3:22825054-22825073 | MS.gene08195:intron | 35.0% | |
| TGATTCACAAGTATCCGTAT+TGG | - | chr7.3:22825398-22825417 | MS.gene08195:intron | 35.0% | |
| ! | AAAGGATCATCTTTTCTGTG+AGG | + | chr7.3:22825163-22825182 | None:intergenic | 35.0% |
| ! | ATGGCATTGAATTTCACATC+AGG | + | chr7.3:22825496-22825515 | None:intergenic | 35.0% |
| ! | CCAACCTTGTTTCATCAAAT+AGG | - | chr7.3:22825611-22825630 | MS.gene08195:intron | 35.0% |
| ! | CTGAAAGGTATAGTTAGTTC+TGG | - | chr7.3:22826255-22826274 | MS.gene08195:CDS | 35.0% |
| ! | CTTTTTCCATAGCAAGTCTA+CGG | - | chr7.3:22825314-22825333 | MS.gene08195:intron | 35.0% |
| ! | GGAGAAGGAAGAATGAATTT+TGG | + | chr7.3:22823064-22823083 | None:intergenic | 35.0% |
| ! | TCTTTTCTTGGCCAAATTTG+TGG | + | chr7.3:22825583-22825602 | None:intergenic | 35.0% |
| ! | TGTGGACCTTTCTCTATTTT+TGG | - | chr7.3:22823558-22823577 | MS.gene08195:intron | 35.0% |
| ! | TTTTGGCACCCTATAAGAAA+TGG | - | chr7.3:22823921-22823940 | MS.gene08195:CDS | 35.0% |
| !! | AAAAAGCTAGCTTTCTTTGC+CGG | - | chr7.3:22825934-22825953 | MS.gene08195:intron | 35.0% |
| !! | AGTATGAGAGTGTTGGTAAA+GGG | + | chr7.3:22822879-22822898 | None:intergenic | 35.0% |
| !! | GATACCCCTATTTCTAAAAC+CGG | + | chr7.3:22824574-22824593 | None:intergenic | 35.0% |
| !! | GTAAGGTATTGGTTAAGTGA+GGG | + | chr7.3:22823090-22823109 | None:intergenic | 35.0% |
| !! | TAAGGTATTGGTTAAGTGAG+GGG | + | chr7.3:22823089-22823108 | None:intergenic | 35.0% |
| !! | TGTAAGGTATTGGTTAAGTG+AGG | + | chr7.3:22823091-22823110 | None:intergenic | 35.0% |
| !! | TTGGGTGGATTTTCTTTTCT+TGG | + | chr7.3:22825595-22825614 | None:intergenic | 35.0% |
| !!! | CACGAAAACTCTGTTTTTGA+CGG | - | chr7.3:22825037-22825056 | MS.gene08195:intron | 35.0% |
| !!! | CATTTTAAGGTGGCTTTTGT+TGG | - | chr7.3:22823338-22823357 | MS.gene08195:intron | 35.0% |
| AATGCATCAAAGTCAAGTGG+AGG | + | chr7.3:22826342-22826361 | None:intergenic | 40.0% | |
| ATGCATGCCTACCACAAATT+TGG | - | chr7.3:22825569-22825588 | MS.gene08195:intron | 40.0% | |
| ATGGTGTGTGAAGATGATTG+AGG | + | chr7.3:22822996-22823015 | None:intergenic | 40.0% | |
| ATTGAGATGAAGCTGGCATT+AGG | - | chr7.3:22823687-22823706 | MS.gene08195:CDS | 40.0% | |
| CATACTTTCCAATTGGGTCA+TGG | - | chr7.3:22823142-22823161 | MS.gene08195:CDS | 40.0% | |
| CCATACGGTGATGAGTTATT+AGG | - | chr7.3:22826045-22826064 | MS.gene08195:intron | 40.0% | |
| CCTAATAACTCATCACCGTA+TGG | + | chr7.3:22826048-22826067 | None:intergenic | 40.0% | |
| CTTATGTGACATTGCCTACA+TGG | + | chr7.3:22824462-22824481 | None:intergenic | 40.0% | |
| GCTACAGAAGAATGTGTTGA+AGG | - | chr7.3:22826290-22826309 | MS.gene08195:CDS | 40.0% | |
| GGATAAATCTTGTCGAGACA+TGG | - | chr7.3:22825977-22825996 | MS.gene08195:intron | 40.0% | |
| GTCCATTAATCAGCTGTGTT+AGG | - | chr7.3:22824839-22824858 | MS.gene08195:intron | 40.0% | |
| GTTAAGAGAGCTAAGGTAGT+TGG | + | chr7.3:22822941-22822960 | None:intergenic | 40.0% | |
| TCGACAAGATTTATCCGTAC+TGG | + | chr7.3:22825973-22825992 | None:intergenic | 40.0% | |
| TGGCATGTCATTCAATTGGA+AGG | - | chr7.3:22825452-22825471 | MS.gene08195:intron | 40.0% | |
| TTCAATTGGAAGGTCTGCTA+TGG | - | chr7.3:22825462-22825481 | MS.gene08195:intron | 40.0% | |
| TTCTTGGCCAAATTTGTGGT+AGG | + | chr7.3:22825579-22825598 | None:intergenic | 40.0% | |
| TTGAGATGAAGCTGGCATTA+GGG | - | chr7.3:22823688-22823707 | MS.gene08195:CDS | 40.0% | |
| TTGATGTCGAATCAATCAGG+TGG | + | chr7.3:22825687-22825706 | None:intergenic | 40.0% | |
| TTTAGACCCAAAAGTGGTGA+TGG | + | chr7.3:22825742-22825761 | None:intergenic | 40.0% | |
| TTTGATGAAACAAGGTTGGG+TGG | + | chr7.3:22825610-22825629 | None:intergenic | 40.0% | |
| ! | AACTTGACCATCACCACTTT+TGG | - | chr7.3:22825732-22825751 | MS.gene08195:intron | 40.0% |
| ! | ATTTTGCATACCCTTTGAGC+TGG | + | chr7.3:22823206-22823225 | None:intergenic | 40.0% |
| ! | CAACATGAGTATGAGAGTGT+TGG | + | chr7.3:22822886-22822905 | None:intergenic | 40.0% |
| ! | TCGAATCAATCAGGTGGATT+AGG | + | chr7.3:22825681-22825700 | None:intergenic | 40.0% |
| !! | ACTTGACCATCACCACTTTT+GGG | - | chr7.3:22825733-22825752 | MS.gene08195:intron | 40.0% |
| !! | CGTAGACTTGCTATGGAAAA+AGG | + | chr7.3:22825316-22825335 | None:intergenic | 40.0% |
| !! | GAGTATGAGAGTGTTGGTAA+AGG | + | chr7.3:22822880-22822899 | None:intergenic | 40.0% |
| !! | GCACATGTTTTTGTCATTGC+AGG | - | chr7.3:22825004-22825023 | MS.gene08195:intron | 40.0% |
| !! | TGAAGTTAAGAGTGGATTGG+TGG | + | chr7.3:22823030-22823049 | None:intergenic | 40.0% |
| !!! | AACTCTGTTTTTGACGGTTC+AGG | - | chr7.3:22825043-22825062 | MS.gene08195:intron | 40.0% |
| !!! | AGGTAAGGGAGCATTTTCAA+TGG | - | chr7.3:22826310-22826329 | MS.gene08195:CDS | 40.0% |
| ATACCCTTTGAGCTGGATTG+GGG | + | chr7.3:22823199-22823218 | None:intergenic | 45.0% | |
| CATACCCTTTGAGCTGGATT+GGG | + | chr7.3:22823200-22823219 | None:intergenic | 45.0% | |
| CGTGAGCCATTTACCAATCT+AGG | + | chr7.3:22823900-22823919 | None:intergenic | 45.0% | |
| GAAGTGAACACAGCACGTAT+TGG | - | chr7.3:22826099-22826118 | MS.gene08195:CDS | 45.0% | |
| GAGAAGTGAATTCGCCAGTA+CGG | - | chr7.3:22825956-22825975 | MS.gene08195:intron | 45.0% | |
| TACTGGCGAATTCACTTCTC+CGG | + | chr7.3:22825956-22825975 | None:intergenic | 45.0% | |
| TTACCCGTGAAAACTGAACC+CGG | - | chr7.3:22825196-22825215 | MS.gene08195:intron | 45.0% | |
| TTCACTGGCATAATTGCCAC+CGG | + | chr7.3:22825218-22825237 | None:intergenic | 45.0% | |
| ! | ATTGGTGGTTATGTGGACGA+TGG | + | chr7.3:22823015-22823034 | None:intergenic | 45.0% |
| ! | TGGTAAATGGCTCACGCTTT+TGG | - | chr7.3:22823904-22823923 | MS.gene08195:CDS | 45.0% |
| !! | AGAGTGGATTGGTGGTTATG+TGG | + | chr7.3:22823022-22823041 | None:intergenic | 45.0% |
| !! | ATCATGCCGTAGACTTGCTA+TGG | + | chr7.3:22825323-22825342 | None:intergenic | 45.0% |
| !! | GAGTGTTGGTAAAGGGAAGA+AGG | + | chr7.3:22822872-22822891 | None:intergenic | 45.0% |
| !! | GTATTGGTTAAGTGAGGGGT+TGG | + | chr7.3:22823085-22823104 | None:intergenic | 45.0% |
| ATAAAAGTGATCCGCGCCAC+CGG | + | chr7.3:22825431-22825450 | None:intergenic | 50.0% | |
| CCTTGGACCACAAAGTCAAC+GGG | - | chr7.3:22823165-22823184 | MS.gene08195:CDS | 50.0% | |
| CTTGGACCACAAAGTCAACG+GGG | - | chr7.3:22823166-22823185 | MS.gene08195:CDS | 50.0% | |
| GCATACCCTTTGAGCTGGAT+TGG | + | chr7.3:22823201-22823220 | None:intergenic | 50.0% | |
| GCCTTGGACCACAAAGTCAA+CGG | - | chr7.3:22823164-22823183 | MS.gene08195:CDS | 50.0% | |
| GGCATGCTGTTGTTGAACCT+TGG | - | chr7.3:22823439-22823458 | MS.gene08195:intron | 50.0% | |
| GGTTCAACAACAGCATGCCA+TGG | + | chr7.3:22823438-22823457 | None:intergenic | 50.0% | |
| GTTAAGTGAGGGGTTGGAGA+AGG | + | chr7.3:22823079-22823098 | None:intergenic | 50.0% | |
| TATCCGTATTGGAACCGCAC+CGG | - | chr7.3:22825409-22825428 | MS.gene08195:intron | 50.0% | |
| TCACTGGCATAATTGCCACC+GGG | + | chr7.3:22825217-22825236 | None:intergenic | 50.0% | |
| TTCCAATTGGGTCATGGCCT+TGG | - | chr7.3:22823148-22823167 | MS.gene08195:CDS | 50.0% | |
| !! | CATGATCGTCGAGTTGGTGT+GGG | - | chr7.3:22825337-22825356 | MS.gene08195:intron | 50.0% |
| !! | TGGCGCGGATCACTTTTATG+TGG | - | chr7.3:22825432-22825451 | MS.gene08195:intron | 50.0% |
| CCACCCCAATCCAGCTCAAA+GGG | - | chr7.3:22823193-22823212 | MS.gene08195:CDS | 55.0% | |
| CTACGGCATGATCGTCGAGT+TGG | - | chr7.3:22825331-22825350 | MS.gene08195:intron | 55.0% | |
| GTCCAAGGCCATGACCCAAT+TGG | + | chr7.3:22823153-22823172 | None:intergenic | 55.0% | |
| ! | CCACCGGGTTCAGTTTTCAC+GGG | + | chr7.3:22825202-22825221 | None:intergenic | 55.0% |
| ! | GCCACCGGGTTCAGTTTTCA+CGG | + | chr7.3:22825203-22825222 | None:intergenic | 55.0% |
| !! | CCCGTTGACTTTGTGGTCCA+AGG | + | chr7.3:22823168-22823187 | None:intergenic | 55.0% |
| !! | GCATGATCGTCGAGTTGGTG+TGG | - | chr7.3:22825336-22825355 | MS.gene08195:intron | 55.0% |
| !! | GGCAAACCCCGTTGACTTTG+TGG | + | chr7.3:22823175-22823194 | None:intergenic | 55.0% |
| CCACCGGTGCGGTTCCAATA+CGG | + | chr7.3:22825415-22825434 | None:intergenic | 60.0% | |
| CCCGTGAAAACTGAACCCGG+TGG | - | chr7.3:22825199-22825218 | MS.gene08195:intron | 60.0% | |
| GCCACCCCAATCCAGCTCAA+AGG | - | chr7.3:22823192-22823211 | MS.gene08195:CDS | 60.0% | |
| ! | CCCTTTGAGCTGGATTGGGG+TGG | + | chr7.3:22823196-22823215 | None:intergenic | 60.0% |
| !! | GATCGTCGAGTTGGTGTGGG+AGG | - | chr7.3:22825340-22825359 | MS.gene08195:intron | 60.0% |
| CCGTATTGGAACCGCACCGG+TGG | - | chr7.3:22825412-22825431 | MS.gene08195:intron | 65.0% | |
| AGTGATCCGCGCCACCGGTG+CGG | + | chr7.3:22825426-22825445 | None:intergenic | 70.0% | |
| ! | TTGGAACCGCACCGGTGGCG+CGG | - | chr7.3:22825417-22825436 | MS.gene08195:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 22822860 | 22826428 | 22822860 | ID=MS.gene08195 |
| chr7.3 | mRNA | 22822860 | 22826428 | 22822860 | ID=MS.gene08195.t1;Parent=MS.gene08195 |
| chr7.3 | exon | 22826074 | 22826428 | 22826074 | ID=MS.gene08195.t1.exon1;Parent=MS.gene08195.t1 |
| chr7.3 | CDS | 22826074 | 22826428 | 22826074 | ID=cds.MS.gene08195.t1;Parent=MS.gene08195.t1 |
| chr7.3 | exon | 22823656 | 22824262 | 22823656 | ID=MS.gene08195.t1.exon2;Parent=MS.gene08195.t1 |
| chr7.3 | CDS | 22823656 | 22824262 | 22823656 | ID=cds.MS.gene08195.t1;Parent=MS.gene08195.t1 |
| chr7.3 | exon | 22822860 | 22823355 | 22822860 | ID=MS.gene08195.t1.exon3;Parent=MS.gene08195.t1 |
| chr7.3 | CDS | 22822860 | 22823355 | 22822860 | ID=cds.MS.gene08195.t1;Parent=MS.gene08195.t1 |
| Gene Sequence |
| Protein sequence |
