Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20443.t1 | RHN50045.1 | 97.7 | 265 | 6 | 0 | 1 | 265 | 268 | 532 | 1.30E-147 | 532.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20443.t1 | P07369 | 91.4 | 267 | 21 | 2 | 1 | 265 | 1 | 267 | 9.7e-141 | 500.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20443.t1 | G7KKG9 | 97.7 | 265 | 6 | 0 | 1 | 265 | 1 | 265 | 9.0e-148 | 532.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049173 | MS.gene20443 | 0.825446 | 4.67E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene20443 | 0.839863 | 1.23E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene20443 | 0.834698 | 2.58E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene20443 | 0.83403 | 3.79E-56 | -1.69E-46 |
| MS.gene050165 | MS.gene20443 | 0.826603 | 2.48E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene20443 | 0.831024 | 2.11E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene20443 | 0.803562 | 3.29E-49 | -1.69E-46 |
| MS.gene050518 | MS.gene20443 | 0.81485 | 1.25E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene20443 | 0.817076 | 3.98E-52 | -1.69E-46 |
| MS.gene050675 | MS.gene20443 | 0.811747 | 6.00E-51 | -1.69E-46 |
| MS.gene050699 | MS.gene20443 | 0.80116 | 1.03E-48 | -1.69E-46 |
| MS.gene050767 | MS.gene20443 | 0.830975 | 2.17E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene20443 | 0.827991 | 1.15E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene20443 | 0.832984 | 6.92E-56 | -1.69E-46 |
| MS.gene05100 | MS.gene20443 | 0.804171 | 2.46E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene20443 | 0.825968 | 3.51E-54 | -1.69E-46 |
| MS.gene051810 | MS.gene20443 | 0.84807 | 7.75E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene20443 | 0.891587 | 3.47E-74 | -1.69E-46 |
| MS.gene052916 | MS.gene20443 | 0.803019 | 4.26E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene20443 | 0.813169 | 2.93E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene20443 | 0.812161 | 4.87E-51 | -1.69E-46 |
| MS.gene053322 | MS.gene20443 | 0.803912 | 2.78E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene20443 | 0.812052 | 5.15E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene20443 | 0.834433 | 3.01E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene20443 | 0.823301 | 1.49E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene20443 | 0.818692 | 1.72E-52 | -1.69E-46 |
| MS.gene055397 | MS.gene20443 | 0.826282 | 2.95E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene20443 | 0.809546 | 1.79E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene20443 | 0.830647 | 2.61E-55 | -1.69E-46 |
| MS.gene055638 | MS.gene20443 | 0.829203 | 5.87E-55 | -1.69E-46 |
| MS.gene055647 | MS.gene20443 | 0.823831 | 1.12E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene20443 | 0.815213 | 1.04E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene20443 | 0.808611 | 2.84E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene20443 | 0.824742 | 6.84E-54 | -1.69E-46 |
| MS.gene056657 | MS.gene20443 | 0.837147 | 6.17E-57 | -1.69E-46 |
| MS.gene057129 | MS.gene20443 | 0.815459 | 9.14E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene20443 | 0.801182 | 1.02E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene20443 | 0.829889 | 4.00E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene20443 | 0.807033 | 6.16E-50 | -1.69E-46 |
| MS.gene058903 | MS.gene20443 | 0.803347 | 3.64E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene20443 | 0.834296 | 3.25E-56 | -1.69E-46 |
| MS.gene059029 | MS.gene20443 | 0.80085 | 1.19E-48 | -1.69E-46 |
| MS.gene059677 | MS.gene20443 | 0.821798 | 3.33E-53 | -1.69E-46 |
| MS.gene060356 | MS.gene20443 | 0.804152 | 2.48E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene20443 | 0.830337 | 3.11E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81230 | MS.gene20443 | PPI |
| MS.gene99767 | MS.gene20443 | PPI |
| MS.gene031028 | MS.gene20443 | PPI |
| MS.gene20443 | MS.gene03545 | PPI |
| MS.gene20443 | MS.gene35137 | PPI |
| MS.gene20443 | MS.gene93362 | PPI |
| MS.gene20446 | MS.gene20443 | PPI |
| MS.gene20444 | MS.gene20443 | PPI |
| MS.gene20443 | MS.gene88379 | PPI |
| MS.gene38046 | MS.gene20443 | PPI |
| MS.gene031355 | MS.gene20443 | PPI |
| MS.gene20443 | MS.gene020883 | PPI |
| MS.gene20443 | MS.gene20445 | PPI |
| MS.gene36470 | MS.gene20443 | PPI |
| MS.gene031016 | MS.gene20443 | PPI |
| MS.gene20443 | MS.gene028321 | PPI |
| MS.gene20443 | MS.gene031030 | PPI |
| MS.gene023132 | MS.gene20443 | PPI |
| MS.gene38214 | MS.gene20443 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20443.t1 | MTR_6g012080 | 97.736 | 265 | 6 | 0 | 1 | 265 | 1 | 265 | 0.0 | 529 |
| MS.gene20443.t1 | MTR_6g011890 | 96.226 | 265 | 10 | 0 | 1 | 265 | 1 | 265 | 0.0 | 524 |
| MS.gene20443.t1 | MTR_6g012110 | 96.226 | 265 | 10 | 0 | 1 | 265 | 1 | 265 | 0.0 | 521 |
| MS.gene20443.t1 | MTR_6g011880 | 93.208 | 265 | 18 | 0 | 1 | 265 | 1 | 265 | 0.0 | 498 |
| MS.gene20443.t1 | MTR_6g011870 | 93.208 | 265 | 18 | 0 | 1 | 265 | 1 | 265 | 1.35e-180 | 497 |
| MS.gene20443.t1 | MTR_4g094605 | 90.226 | 266 | 25 | 1 | 1 | 265 | 1 | 266 | 2.53e-178 | 491 |
| MS.gene20443.t1 | MTR_5g097280 | 75.373 | 268 | 60 | 3 | 1 | 265 | 1 | 265 | 3.62e-148 | 415 |
| MS.gene20443.t1 | MTR_6g043600 | 77.736 | 265 | 23 | 3 | 1 | 265 | 1 | 229 | 6.21e-138 | 387 |
| MS.gene20443.t1 | MTR_2g081090 | 77.982 | 218 | 46 | 2 | 49 | 264 | 19 | 236 | 4.39e-119 | 340 |
| MS.gene20443.t1 | MTR_2g081090 | 77.982 | 218 | 46 | 2 | 49 | 264 | 46 | 263 | 6.43e-119 | 341 |
| MS.gene20443.t1 | MTR_6g060175 | 52.632 | 209 | 90 | 4 | 49 | 253 | 71 | 274 | 4.34e-64 | 202 |
| MS.gene20443.t1 | MTR_1g026550 | 50.926 | 216 | 95 | 6 | 49 | 253 | 107 | 322 | 1.96e-60 | 194 |
| MS.gene20443.t1 | MTR_6g060175 | 50.718 | 209 | 84 | 5 | 49 | 253 | 71 | 264 | 1.92e-57 | 185 |
| MS.gene20443.t1 | MTR_5g098785 | 36.559 | 279 | 141 | 10 | 1 | 253 | 1 | 269 | 1.57e-37 | 133 |
| MS.gene20443.t1 | MTR_6g033320 | 43.005 | 193 | 90 | 6 | 66 | 253 | 56 | 233 | 8.15e-37 | 130 |
| MS.gene20443.t1 | MTR_5g098780 | 35.484 | 279 | 142 | 10 | 1 | 253 | 1 | 267 | 5.20e-36 | 129 |
| MS.gene20443.t1 | MTR_8g023790 | 35.135 | 259 | 120 | 11 | 9 | 249 | 28 | 256 | 1.11e-35 | 128 |
| MS.gene20443.t1 | MTR_3g101670 | 37.931 | 203 | 94 | 6 | 64 | 249 | 66 | 253 | 1.12e-33 | 123 |
| MS.gene20443.t1 | MTR_2g042720 | 36.283 | 226 | 108 | 9 | 52 | 260 | 60 | 266 | 1.92e-31 | 117 |
| MS.gene20443.t1 | MTR_3g435460 | 35.533 | 197 | 103 | 5 | 65 | 252 | 62 | 243 | 3.48e-30 | 114 |
| MS.gene20443.t1 | MTR_4g015570 | 42.683 | 164 | 79 | 7 | 91 | 253 | 132 | 281 | 1.91e-27 | 107 |
| MS.gene20443.t1 | MTR_1g026550 | 46.825 | 126 | 63 | 3 | 47 | 168 | 105 | 230 | 3.35e-27 | 105 |
| MS.gene20443.t1 | MTR_3g435460 | 34.392 | 189 | 100 | 5 | 73 | 252 | 9 | 182 | 1.63e-26 | 102 |
| MS.gene20443.t1 | MTR_3g070340 | 43.590 | 156 | 67 | 8 | 92 | 243 | 136 | 274 | 4.41e-21 | 90.1 |
| MS.gene20443.t1 | MTR_5g098770 | 54.054 | 74 | 33 | 1 | 181 | 253 | 13 | 86 | 5.80e-21 | 85.1 |
| MS.gene20443.t1 | MTR_2g008610 | 33.333 | 207 | 88 | 8 | 66 | 242 | 73 | 259 | 1.23e-17 | 80.5 |
| MS.gene20443.t1 | MTR_2g436960 | 49.315 | 73 | 30 | 2 | 180 | 252 | 27 | 92 | 1.37e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20443.t1 | AT1G29930 | 88.390 | 267 | 29 | 2 | 1 | 265 | 1 | 267 | 7.47e-173 | 477 |
| MS.gene20443.t1 | AT1G29920 | 88.015 | 267 | 30 | 2 | 1 | 265 | 1 | 267 | 4.98e-172 | 475 |
| MS.gene20443.t1 | AT1G29910 | 88.015 | 267 | 30 | 2 | 1 | 265 | 1 | 267 | 4.98e-172 | 475 |
| MS.gene20443.t1 | AT2G34430 | 88.390 | 267 | 28 | 3 | 1 | 265 | 1 | 266 | 2.33e-170 | 471 |
| MS.gene20443.t1 | AT2G34420 | 88.390 | 267 | 27 | 3 | 1 | 265 | 1 | 265 | 6.58e-170 | 470 |
| MS.gene20443.t1 | AT2G05070 | 77.239 | 268 | 55 | 3 | 1 | 265 | 1 | 265 | 3.84e-150 | 420 |
| MS.gene20443.t1 | AT3G27690 | 76.753 | 271 | 52 | 4 | 2 | 265 | 32 | 298 | 1.62e-149 | 419 |
| MS.gene20443.t1 | AT3G27690 | 77.206 | 272 | 49 | 5 | 1 | 265 | 1 | 266 | 7.11e-149 | 417 |
| MS.gene20443.t1 | AT2G05100 | 76.753 | 271 | 51 | 5 | 1 | 265 | 1 | 265 | 9.63e-149 | 416 |
| MS.gene20443.t1 | AT2G05100 | 76.132 | 243 | 46 | 5 | 1 | 237 | 1 | 237 | 1.80e-127 | 364 |
| MS.gene20443.t1 | AT5G54270 | 68.539 | 267 | 68 | 7 | 10 | 264 | 2 | 264 | 1.23e-118 | 340 |
| MS.gene20443.t1 | AT1G76570 | 46.725 | 229 | 112 | 5 | 35 | 253 | 92 | 320 | 4.82e-61 | 196 |
| MS.gene20443.t1 | AT4G10340 | 50.711 | 211 | 95 | 4 | 47 | 253 | 60 | 265 | 8.20e-60 | 191 |
| MS.gene20443.t1 | AT3G54890 | 44.041 | 193 | 88 | 6 | 66 | 253 | 55 | 232 | 3.49e-38 | 134 |
| MS.gene20443.t1 | AT1G61520 | 39.631 | 217 | 96 | 9 | 62 | 253 | 59 | 265 | 9.21e-37 | 131 |
| MS.gene20443.t1 | AT1G61520 | 39.631 | 217 | 96 | 9 | 62 | 253 | 59 | 265 | 9.21e-37 | 131 |
| MS.gene20443.t1 | AT1G45474 | 37.885 | 227 | 124 | 6 | 32 | 249 | 24 | 242 | 9.25e-36 | 128 |
| MS.gene20443.t1 | AT1G45474 | 37.885 | 227 | 124 | 6 | 32 | 249 | 24 | 242 | 9.25e-36 | 128 |
| MS.gene20443.t1 | AT3G61470 | 38.605 | 215 | 96 | 9 | 52 | 249 | 50 | 245 | 2.08e-35 | 127 |
| MS.gene20443.t1 | AT1G61520 | 39.320 | 206 | 90 | 9 | 73 | 253 | 15 | 210 | 1.55e-33 | 121 |
| MS.gene20443.t1 | AT3G47470 | 40.104 | 192 | 101 | 7 | 65 | 252 | 63 | 244 | 7.96e-31 | 115 |
| MS.gene20443.t1 | AT1G19150 | 35.398 | 226 | 110 | 8 | 52 | 260 | 63 | 269 | 3.07e-30 | 114 |
| MS.gene20443.t1 | AT3G08940 | 36.154 | 260 | 104 | 12 | 39 | 253 | 37 | 279 | 5.02e-29 | 111 |
| MS.gene20443.t1 | AT5G01530 | 45.399 | 163 | 74 | 8 | 92 | 253 | 134 | 282 | 2.80e-28 | 109 |
| MS.gene20443.t1 | AT3G54890 | 40.764 | 157 | 74 | 5 | 66 | 218 | 55 | 196 | 2.78e-24 | 97.4 |
| MS.gene20443.t1 | AT3G54890 | 37.368 | 190 | 71 | 6 | 66 | 253 | 55 | 198 | 3.57e-24 | 97.1 |
| MS.gene20443.t1 | AT2G40100 | 41.290 | 155 | 71 | 7 | 92 | 243 | 135 | 272 | 1.75e-22 | 94.0 |
| MS.gene20443.t1 | AT1G15820 | 34.783 | 207 | 85 | 8 | 66 | 242 | 70 | 256 | 1.56e-18 | 82.8 |
| MS.gene20443.t1 | AT5G28450 | 53.968 | 63 | 27 | 2 | 189 | 249 | 99 | 161 | 4.16e-13 | 66.2 |
| MS.gene20443.t1 | AT3G54890 | 42.353 | 85 | 41 | 2 | 66 | 149 | 55 | 132 | 2.27e-11 | 61.2 |
Find 114 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAAGCATCCTTGCTATT+TGG | 0.100251 | 6.3:+6560129 | MS.gene20443:CDS |
| GCTCGCAATGGTGTGAAATT+TGG | 0.267206 | 6.3:+6560023 | MS.gene20443:CDS |
| GGCAGTCCAAGTTATCTTAA+TGG | 0.271865 | 6.3:+6560151 | MS.gene20443:CDS |
| GTCCTCCGTCACTAAAGATT+TGG | 0.289012 | 6.3:-6560073 | None:intergenic |
| GTTCTCCAGAGGTCCCTTTC+CGG | 0.296943 | 6.3:-6560369 | None:intergenic |
| ATGGGCTATGTTGGGTGCCT+TGG | 0.301879 | 6.3:+6559977 | MS.gene20443:CDS |
| TCCAGAAGGAACGTTCTTCT+TGG | 0.314639 | 6.3:-6559784 | None:intergenic |
| TTAGCCATGTTCTCGATGTT+TGG | 0.341867 | 6.3:+6560323 | MS.gene20443:CDS |
| ACAAAGCATCCTTGCTATTT+GGG | 0.343933 | 6.3:+6560130 | MS.gene20443:CDS |
| GGTGAATTTCCCGGTGATTA+TGG | 0.366933 | 6.3:+6559879 | MS.gene20443:CDS |
| TTCGTTCAGGCCATTGTAAC+CGG | 0.370708 | 6.3:+6560350 | MS.gene20443:CDS |
| TACCTCACTGGTGAATTTCC+CGG | 0.380935 | 6.3:+6559870 | MS.gene20443:CDS |
| CTCTCTTCTTCAACAATGGT+TGG | 0.383826 | 6.3:+6559690 | MS.gene20443:CDS |
| AAGTACTTGGGTCCATTCTC+TGG | 0.385387 | 6.3:+6559834 | MS.gene20443:CDS |
| GCAGTCCAAGTTATCTTAAT+GGG | 0.390141 | 6.3:+6560152 | MS.gene20443:CDS |
| TGGGCTATGTTGGGTGCCTT+GGG | 0.394640 | 6.3:+6559978 | MS.gene20443:CDS |
| CAGCTCCCATTAAGATAACT+TGG | 0.395334 | 6.3:-6560157 | None:intergenic |
| ATGTGTCTTCCCTGAGCTCT+TGG | 0.396483 | 6.3:+6560001 | MS.gene20443:CDS |
| ATTCTTCCCATGCCAAGGTC+TGG | 0.397640 | 6.3:-6559741 | None:intergenic |
| ACCAAGAAGAACGTTCCTTC+TGG | 0.405063 | 6.3:+6559783 | MS.gene20443:CDS |
| TCCTCCGTCACTAAAGATTT+GGG | 0.411323 | 6.3:-6560072 | None:intergenic |
| CCCAAGTACTTGACACGGTC+TGG | 0.412244 | 6.3:-6559822 | None:intergenic |
| TCCAGACCGTGTCAAGTACT+TGG | 0.414229 | 6.3:+6559821 | MS.gene20443:CDS |
| TGTTGACGGGGTCAGCAATA+TGG | 0.416907 | 6.3:-6560400 | None:intergenic |
| GGTGGAAGCTTTGACCCATT+GGG | 0.417791 | 6.3:+6560239 | MS.gene20443:CDS |
| CTTTGTGCATGGACTAGGCT+AGG | 0.429458 | 6.3:-6560113 | None:intergenic |
| TGACGGAGGACTTGACTACT+TGG | 0.430522 | 6.3:+6560085 | MS.gene20443:CDS |
| CGTATTGCTGGTGGACCTCT+TGG | 0.432323 | 6.3:+6560191 | MS.gene20443:CDS |
| GTGGAGGGTTACCGTATTGC+TGG | 0.438239 | 6.3:+6560179 | MS.gene20443:CDS |
| TTTAATTCTGCAAAAGCCTC+TGG | 0.440349 | 6.3:-6560275 | None:intergenic |
| CCATTGCGAGCCAAGAGCTC+AGG | 0.443229 | 6.3:-6560011 | None:intergenic |
| TCTCTTCTTCAACAATGGTT+GGG | 0.445775 | 6.3:+6559691 | MS.gene20443:CDS |
| GGCTCTCTCTTCTTCAACAA+TGG | 0.456801 | 6.3:+6559686 | MS.gene20443:CDS |
| TGTGGATGACCTCGAGTTCA+CGG | 0.456904 | 6.3:-6559950 | None:intergenic |
| AGGTGGAAGCTTTGACCCAT+TGG | 0.457132 | 6.3:+6560238 | MS.gene20443:CDS |
| GGATGCTTTGTGCATGGACT+AGG | 0.457276 | 6.3:-6560118 | None:intergenic |
| CACAGCAGATGGGCTATGTT+GGG | 0.458091 | 6.3:+6559969 | MS.gene20443:CDS |
| CCACAGCAGATGGGCTATGT+TGG | 0.462149 | 6.3:+6559968 | MS.gene20443:CDS |
| AGCCCACGCGTTGTTGTTGA+CGG | 0.463419 | 6.3:-6560414 | None:intergenic |
| TGGCGAAGCTGTGTGGTTCA+AGG | 0.464071 | 6.3:+6560043 | MS.gene20443:CDS |
| ATTTCCCGGTGATTATGGTT+GGG | 0.467005 | 6.3:+6559884 | MS.gene20443:CDS |
| CTTTCCGGGGACAAAGTTTG+TGG | 0.467067 | 6.3:-6560441 | None:intergenic |
| AATTTCCCGGTGATTATGGT+TGG | 0.472108 | 6.3:+6559883 | MS.gene20443:CDS |
| GATTATGGTTGGGACACTGC+CGG | 0.474056 | 6.3:+6559894 | MS.gene20443:CDS |
| GATCATCAGCGAGGCCCAAT+GGG | 0.474717 | 6.3:-6560253 | None:intergenic |
| GCCCACGCGTTGTTGTTGAC+GGG | 0.482417 | 6.3:-6560413 | None:intergenic |
| CAGGCCATTGTAACCGGAAA+GGG | 0.483589 | 6.3:+6560356 | MS.gene20443:CDS |
| AATTCACCAGTGAGGTAAGA+TGG | 0.486152 | 6.3:-6559864 | None:intergenic |
| TTCTTCAACAATGGTTGGGA+AGG | 0.494108 | 6.3:+6559695 | MS.gene20443:CDS |
| CTCTGGGTCAGCAGAAAGCC+CGG | 0.497871 | 6.3:-6559913 | None:intergenic |
| TGAAAGAACTCAAGAATGGC+AGG | 0.502996 | 6.3:+6560300 | MS.gene20443:CDS |
| ATTATGGTTGGGACACTGCC+GGG | 0.504040 | 6.3:+6559895 | MS.gene20443:CDS |
| CCTGAGCTCTTGGCTCGCAA+TGG | 0.515629 | 6.3:+6560011 | MS.gene20443:CDS |
| AGAAGGAACGTTCTTCTTGG+TGG | 0.518277 | 6.3:-6559781 | None:intergenic |
| TCGAGGTCATCCACAGCAGA+TGG | 0.521084 | 6.3:+6559958 | MS.gene20443:CDS |
| GATGGAGCTTCACCAGAGAA+TGG | 0.521781 | 6.3:-6559846 | None:intergenic |
| GGATCATCAGCGAGGCCCAA+TGG | 0.522174 | 6.3:-6560254 | None:intergenic |
| AGCTTCCACCTGGGTAGAGT+GGG | 0.525225 | 6.3:-6560226 | None:intergenic |
| TATCTTAATGGGAGCTGTGG+AGG | 0.528220 | 6.3:+6560163 | MS.gene20443:CDS |
| TTTGCCACAAACTTTGTCCC+CGG | 0.531351 | 6.3:+6560437 | MS.gene20443:CDS |
| ATGCCAAGGTCTGGAGTAGA+GGG | 0.531803 | 6.3:-6559732 | None:intergenic |
| TGTAACCGGAAAGGGACCTC+TGG | 0.531859 | 6.3:+6560364 | MS.gene20443:CDS |
| TGGTGATTCTTCCCATGCCA+AGG | 0.534305 | 6.3:-6559746 | None:intergenic |
| GAAGCTGTGTGGTTCAAGGC+AGG | 0.542308 | 6.3:+6560047 | MS.gene20443:CDS |
| CATGCCAAGGTCTGGAGTAG+AGG | 0.544682 | 6.3:-6559733 | None:intergenic |
| ATCTTAATGGGAGCTGTGGA+GGG | 0.548899 | 6.3:+6560164 | MS.gene20443:CDS |
| ACCCCGTCAACAACAACGCG+TGG | 0.549728 | 6.3:+6560411 | MS.gene20443:CDS |
| CAAGAGGTCCACCAGCAATA+CGG | 0.554867 | 6.3:-6560190 | None:intergenic |
| AAGCTTCCACCTGGGTAGAG+TGG | 0.557601 | 6.3:-6560227 | None:intergenic |
| GAAGCTCCATCTTACCTCAC+TGG | 0.557671 | 6.3:+6559858 | MS.gene20443:CDS |
| AGTGTCCCAACCATAATCAC+CGG | 0.558986 | 6.3:-6559889 | None:intergenic |
| ACACGGTCTGGACCGTACCA+TGG | 0.561133 | 6.3:-6559810 | None:intergenic |
| AAATCCAAACATCGAGAACA+TGG | 0.566722 | 6.3:-6560327 | None:intergenic |
| TTTGTGCATGGACTAGGCTA+GGG | 0.567865 | 6.3:-6560112 | None:intergenic |
| AATGGGTCAAAGCTTCCACC+TGG | 0.569754 | 6.3:-6560236 | None:intergenic |
| AGGTCCCTTTCCGGTTACAA+TGG | 0.576373 | 6.3:-6560360 | None:intergenic |
| AAGGTGAAAGAACTCAAGAA+TGG | 0.578710 | 6.3:+6560296 | MS.gene20443:CDS |
| TAGCAAGGATGCTTTGTGCA+TGG | 0.585942 | 6.3:-6560124 | None:intergenic |
| CCCACGCGTTGTTGTTGACG+GGG | 0.586524 | 6.3:-6560412 | None:intergenic |
| CTCTACTCCAGACCTTGGCA+TGG | 0.586599 | 6.3:+6559734 | MS.gene20443:CDS |
| CATTGCGAGCCAAGAGCTCA+GGG | 0.591519 | 6.3:-6560010 | None:intergenic |
| CCAGACCGTGTCAAGTACTT+GGG | 0.592167 | 6.3:+6559822 | MS.gene20443:CDS |
| CGAGGTCATCCACAGCAGAT+GGG | 0.594462 | 6.3:+6559959 | MS.gene20443:CDS |
| AGTTATCTTAATGGGAGCTG+TGG | 0.599582 | 6.3:+6560160 | MS.gene20443:CDS |
| TCAGGCCATTGTAACCGGAA+AGG | 0.602000 | 6.3:+6560355 | MS.gene20443:CDS |
| CTTGGACTGCCCAAATAGCA+AGG | 0.605235 | 6.3:-6560139 | None:intergenic |
| CCAACATAGCCCATCTGCTG+TGG | 0.605876 | 6.3:-6559968 | None:intergenic |
| TCTACTCCAGACCTTGGCAT+GGG | 0.609820 | 6.3:+6559735 | MS.gene20443:CDS |
| TGCTGGTGGACCTCTTGGTG+AGG | 0.612383 | 6.3:+6560196 | MS.gene20443:CDS |
| GCCAAGGTCTGGAGTAGAGG+GGG | 0.615542 | 6.3:-6559730 | None:intergenic |
| CCTTCTGGAAGTCCATGGTA+CGG | 0.618330 | 6.3:+6559798 | MS.gene20443:CDS |
| ACGTTCCTTCTGGAAGTCCA+TGG | 0.623865 | 6.3:+6559793 | MS.gene20443:CDS |
| GGGCCTCGCTGATGATCCAG+AGG | 0.624243 | 6.3:+6560259 | MS.gene20443:CDS |
| GTGTCCCAACCATAATCACC+GGG | 0.633585 | 6.3:-6559888 | None:intergenic |
| CCCCGTCAACAACAACGCGT+GGG | 0.635213 | 6.3:+6560412 | MS.gene20443:CDS |
| GGATCCCAAATCTTTAGTGA+CGG | 0.639909 | 6.3:+6560068 | MS.gene20443:CDS |
| TGAAATTTGGCGAAGCTGTG+TGG | 0.640456 | 6.3:+6560036 | MS.gene20443:CDS |
| GGTCAGCAATATGGTCAGCA+AGG | 0.646252 | 6.3:-6560391 | None:intergenic |
| GAGGGTTACCGTATTGCTGG+TGG | 0.648889 | 6.3:+6560182 | MS.gene20443:CDS |
| TCCCAAATCTTTAGTGACGG+AGG | 0.652925 | 6.3:+6560071 | MS.gene20443:CDS |
| TAGAATGGCTACATCAACAA+TGG | 0.654071 | 6.3:+6559665 | None:intergenic |
| CCGTACCATGGACTTCCAGA+AGG | 0.658025 | 6.3:-6559798 | None:intergenic |
| GACGGAGGACTTGACTACTT+GGG | 0.666450 | 6.3:+6560086 | MS.gene20443:CDS |
| CTCAGGGAAGACACATCCCA+AGG | 0.667407 | 6.3:-6559994 | None:intergenic |
| GTAGTCGACCCACTCTACCC+AGG | 0.678164 | 6.3:+6560218 | MS.gene20443:CDS |
| GGGTCGACTACCTCACCAAG+AGG | 0.687407 | 6.3:-6560206 | None:intergenic |
| ATGGGTCAAAGCTTCCACCT+GGG | 0.688608 | 6.3:-6560235 | None:intergenic |
| GTCGACCCACTCTACCCAGG+TGG | 0.693684 | 6.3:+6560221 | MS.gene20443:CDS |
| TGCCAAGGTCTGGAGTAGAG+GGG | 0.699010 | 6.3:-6559731 | None:intergenic |
| TGGTCAGCAAGGTTCTCCAG+AGG | 0.701983 | 6.3:-6560380 | None:intergenic |
| ATGGACCCAAGTACTTGACA+CGG | 0.711188 | 6.3:-6559827 | None:intergenic |
| CACCGGGAAATTCACCAGTG+AGG | 0.714950 | 6.3:-6559872 | None:intergenic |
| AAGCCTCTGGATCATCAGCG+AGG | 0.746493 | 6.3:-6560262 | None:intergenic |
| GCATGGGAAGAATCACCATG+AGG | 0.752016 | 6.3:+6559751 | MS.gene20443:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAATCCAAACATCGAGAACA+TGG | - | chr6.3:6560330-6560349 | None:intergenic | 35.0% | |
| AAGGTGAAAGAACTCAAGAA+TGG | + | chr6.3:6560296-6560315 | MS.gene20443:CDS | 35.0% | |
| GCAGTCCAAGTTATCTTAAT+GGG | + | chr6.3:6560152-6560171 | MS.gene20443:CDS | 35.0% | |
| TCTCTTCTTCAACAATGGTT+GGG | + | chr6.3:6559691-6559710 | MS.gene20443:CDS | 35.0% | |
| TTTAATTCTGCAAAAGCCTC+TGG | - | chr6.3:6560278-6560297 | None:intergenic | 35.0% | |
| ! | AGAGGCTTTTGCAGAATTAA+AGG | + | chr6.3:6560277-6560296 | MS.gene20443:CDS | 35.0% |
| ! | GATGTTTGGATTTTTCGTTC+AGG | + | chr6.3:6560337-6560356 | MS.gene20443:CDS | 35.0% |
| !! | ACAAAGCATCCTTGCTATTT+GGG | + | chr6.3:6560130-6560149 | MS.gene20443:CDS | 35.0% |
| !! | GGTTTTTGGAAAATGTCTCT+GGG | - | chr6.3:6559932-6559951 | None:intergenic | 35.0% |
| AATTCACCAGTGAGGTAAGA+TGG | - | chr6.3:6559867-6559886 | None:intergenic | 40.0% | |
| AATTTCCCGGTGATTATGGT+TGG | + | chr6.3:6559883-6559902 | MS.gene20443:CDS | 40.0% | |
| AGTTATCTTAATGGGAGCTG+TGG | + | chr6.3:6560160-6560179 | MS.gene20443:CDS | 40.0% | |
| ATTTCCCGGTGATTATGGTT+GGG | + | chr6.3:6559884-6559903 | MS.gene20443:CDS | 40.0% | |
| CAGCTCCCATTAAGATAACT+TGG | - | chr6.3:6560160-6560179 | None:intergenic | 40.0% | |
| CTCTCTTCTTCAACAATGGT+TGG | + | chr6.3:6559690-6559709 | MS.gene20443:CDS | 40.0% | |
| GGATCCCAAATCTTTAGTGA+CGG | + | chr6.3:6560068-6560087 | MS.gene20443:CDS | 40.0% | |
| GGCAGTCCAAGTTATCTTAA+TGG | + | chr6.3:6560151-6560170 | MS.gene20443:CDS | 40.0% | |
| TCCTCCGTCACTAAAGATTT+GGG | - | chr6.3:6560075-6560094 | None:intergenic | 40.0% | |
| TGAAAGAACTCAAGAATGGC+AGG | + | chr6.3:6560300-6560319 | MS.gene20443:CDS | 40.0% | |
| TTAGCCATGTTCTCGATGTT+TGG | + | chr6.3:6560323-6560342 | MS.gene20443:CDS | 40.0% | |
| TTCTTCAACAATGGTTGGGA+AGG | + | chr6.3:6559695-6559714 | MS.gene20443:CDS | 40.0% | |
| !! | CACAAAGCATCCTTGCTATT+TGG | + | chr6.3:6560129-6560148 | MS.gene20443:CDS | 40.0% |
| !! | CGGTTTTTGGAAAATGTCTC+TGG | - | chr6.3:6559933-6559952 | None:intergenic | 40.0% |
| AAGTACTTGGGTCCATTCTC+TGG | + | chr6.3:6559834-6559853 | MS.gene20443:CDS | 45.0% | |
| ACCAAGAAGAACGTTCCTTC+TGG | + | chr6.3:6559783-6559802 | MS.gene20443:CDS | 45.0% | |
| AGAAGGAACGTTCTTCTTGG+TGG | - | chr6.3:6559784-6559803 | None:intergenic | 45.0% | |
| AGTGTCCCAACCATAATCAC+CGG | - | chr6.3:6559892-6559911 | None:intergenic | 45.0% | |
| ATCTTAATGGGAGCTGTGGA+GGG | + | chr6.3:6560164-6560183 | MS.gene20443:CDS | 45.0% | |
| ATGGACCCAAGTACTTGACA+CGG | - | chr6.3:6559830-6559849 | None:intergenic | 45.0% | |
| GCTCGCAATGGTGTGAAATT+TGG | + | chr6.3:6560023-6560042 | MS.gene20443:CDS | 45.0% | |
| GGCTCTCTCTTCTTCAACAA+TGG | + | chr6.3:6559686-6559705 | MS.gene20443:CDS | 45.0% | |
| GGTGAATTTCCCGGTGATTA+TGG | + | chr6.3:6559879-6559898 | MS.gene20443:CDS | 45.0% | |
| GTCCTCCGTCACTAAAGATT+TGG | - | chr6.3:6560076-6560095 | None:intergenic | 45.0% | |
| TACCTCACTGGTGAATTTCC+CGG | + | chr6.3:6559870-6559889 | MS.gene20443:CDS | 45.0% | |
| TAGCAAGGATGCTTTGTGCA+TGG | - | chr6.3:6560127-6560146 | None:intergenic | 45.0% | |
| TATCTTAATGGGAGCTGTGG+AGG | + | chr6.3:6560163-6560182 | MS.gene20443:CDS | 45.0% | |
| TCCAGAAGGAACGTTCTTCT+TGG | - | chr6.3:6559787-6559806 | None:intergenic | 45.0% | |
| TCCCAAATCTTTAGTGACGG+AGG | + | chr6.3:6560071-6560090 | MS.gene20443:CDS | 45.0% | |
| TGAAATTTGGCGAAGCTGTG+TGG | + | chr6.3:6560036-6560055 | MS.gene20443:CDS | 45.0% | |
| TTCCAAAAACCGTGAACTCG+AGG | + | chr6.3:6559941-6559960 | MS.gene20443:CDS | 45.0% | |
| TTCGTTCAGGCCATTGTAAC+CGG | + | chr6.3:6560350-6560369 | MS.gene20443:CDS | 45.0% | |
| TTTGCCACAAACTTTGTCCC+CGG | + | chr6.3:6560437-6560456 | MS.gene20443:CDS | 45.0% | |
| !! | CTTGGTGGTTGTTTTCCTCA+TGG | - | chr6.3:6559769-6559788 | None:intergenic | 45.0% |
| !! | TTTGTGCATGGACTAGGCTA+GGG | - | chr6.3:6560115-6560134 | None:intergenic | 45.0% |
| AATGGGTCAAAGCTTCCACC+TGG | - | chr6.3:6560239-6560258 | None:intergenic | 50.0% | |
| AGGTCCCTTTCCGGTTACAA+TGG | - | chr6.3:6560363-6560382 | None:intergenic | 50.0% | |
| ATGGGTCAAAGCTTCCACCT+GGG | - | chr6.3:6560238-6560257 | None:intergenic | 50.0% | |
| ATGTGTCTTCCCTGAGCTCT+TGG | + | chr6.3:6560001-6560020 | MS.gene20443:CDS | 50.0% | |
| ATTATGGTTGGGACACTGCC+GGG | + | chr6.3:6559895-6559914 | MS.gene20443:CDS | 50.0% | |
| ATTCTTCCCATGCCAAGGTC+TGG | - | chr6.3:6559744-6559763 | None:intergenic | 50.0% | |
| CAAGAGGTCCACCAGCAATA+CGG | - | chr6.3:6560193-6560212 | None:intergenic | 50.0% | |
| CAGGCCATTGTAACCGGAAA+GGG | + | chr6.3:6560356-6560375 | MS.gene20443:CDS | 50.0% | |
| CCAGACCGTGTCAAGTACTT+GGG | + | chr6.3:6559822-6559841 | MS.gene20443:CDS | 50.0% | |
| CTTGGACTGCCCAAATAGCA+AGG | - | chr6.3:6560142-6560161 | None:intergenic | 50.0% | |
| CTTTCCGGGGACAAAGTTTG+TGG | - | chr6.3:6560444-6560463 | None:intergenic | 50.0% | |
| GAAGCTCCATCTTACCTCAC+TGG | + | chr6.3:6559858-6559877 | MS.gene20443:CDS | 50.0% | |
| GACGGAGGACTTGACTACTT+GGG | + | chr6.3:6560086-6560105 | MS.gene20443:CDS | 50.0% | |
| GATGGAGCTTCACCAGAGAA+TGG | - | chr6.3:6559849-6559868 | None:intergenic | 50.0% | |
| GATTATGGTTGGGACACTGC+CGG | + | chr6.3:6559894-6559913 | MS.gene20443:CDS | 50.0% | |
| GCATGGGAAGAATCACCATG+AGG | + | chr6.3:6559751-6559770 | MS.gene20443:CDS | 50.0% | |
| GGATGCTTTGTGCATGGACT+AGG | - | chr6.3:6560121-6560140 | None:intergenic | 50.0% | |
| GGTCAGCAATATGGTCAGCA+AGG | - | chr6.3:6560394-6560413 | None:intergenic | 50.0% | |
| GTGTCCCAACCATAATCACC+GGG | - | chr6.3:6559891-6559910 | None:intergenic | 50.0% | |
| TCAGGCCATTGTAACCGGAA+AGG | + | chr6.3:6560355-6560374 | MS.gene20443:CDS | 50.0% | |
| TCCAGACCGTGTCAAGTACT+TGG | + | chr6.3:6559821-6559840 | MS.gene20443:CDS | 50.0% | |
| TCTACTCCAGACCTTGGCAT+GGG | + | chr6.3:6559735-6559754 | MS.gene20443:CDS | 50.0% | |
| TGACGGAGGACTTGACTACT+TGG | + | chr6.3:6560085-6560104 | MS.gene20443:CDS | 50.0% | |
| TGGTGATTCTTCCCATGCCA+AGG | - | chr6.3:6559749-6559768 | None:intergenic | 50.0% | |
| TGTGGATGACCTCGAGTTCA+CGG | - | chr6.3:6559953-6559972 | None:intergenic | 50.0% | |
| TGTTGACGGGGTCAGCAATA+TGG | - | chr6.3:6560403-6560422 | None:intergenic | 50.0% | |
| ! | ACGTTCCTTCTGGAAGTCCA+TGG | + | chr6.3:6559793-6559812 | MS.gene20443:CDS | 50.0% |
| ! | AGGTGGAAGCTTTGACCCAT+TGG | + | chr6.3:6560238-6560257 | MS.gene20443:CDS | 50.0% |
| ! | ATGCCAAGGTCTGGAGTAGA+GGG | - | chr6.3:6559735-6559754 | None:intergenic | 50.0% |
| ! | CCTTCTGGAAGTCCATGGTA+CGG | + | chr6.3:6559798-6559817 | MS.gene20443:CDS | 50.0% |
| ! | GACCTCGAGTTCACGGTTTT+TGG | - | chr6.3:6559946-6559965 | None:intergenic | 50.0% |
| ! | GGTGGAAGCTTTGACCCATT+GGG | + | chr6.3:6560239-6560258 | MS.gene20443:CDS | 50.0% |
| !! | CACAGCAGATGGGCTATGTT+GGG | + | chr6.3:6559969-6559988 | MS.gene20443:CDS | 50.0% |
| !! | CTTTGTGCATGGACTAGGCT+AGG | - | chr6.3:6560116-6560135 | None:intergenic | 50.0% |
| AAGCCTCTGGATCATCAGCG+AGG | - | chr6.3:6560265-6560284 | None:intergenic | 55.0% | |
| AAGCTTCCACCTGGGTAGAG+TGG | - | chr6.3:6560230-6560249 | None:intergenic | 55.0% | |
| AGCTTCCACCTGGGTAGAGT+GGG | - | chr6.3:6560229-6560248 | None:intergenic | 55.0% | |
| CACCGGGAAATTCACCAGTG+AGG | - | chr6.3:6559875-6559894 | None:intergenic | 55.0% | |
| CATTGCGAGCCAAGAGCTCA+GGG | - | chr6.3:6560013-6560032 | None:intergenic | 55.0% | |
| CCAACATAGCCCATCTGCTG+TGG | - | chr6.3:6559971-6559990 | None:intergenic | 55.0% | |
| CCCAAGTACTTGACACGGTC+TGG | - | chr6.3:6559825-6559844 | None:intergenic | 55.0% | |
| CCGTACCATGGACTTCCAGA+AGG | - | chr6.3:6559801-6559820 | None:intergenic | 55.0% | |
| CGAGGTCATCCACAGCAGAT+GGG | + | chr6.3:6559959-6559978 | MS.gene20443:CDS | 55.0% | |
| CTCAGGGAAGACACATCCCA+AGG | - | chr6.3:6559997-6560016 | None:intergenic | 55.0% | |
| CTCTACTCCAGACCTTGGCA+TGG | + | chr6.3:6559734-6559753 | MS.gene20443:CDS | 55.0% | |
| GAAGCTGTGTGGTTCAAGGC+AGG | + | chr6.3:6560047-6560066 | MS.gene20443:CDS | 55.0% | |
| GAGGGTTACCGTATTGCTGG+TGG | + | chr6.3:6560182-6560201 | MS.gene20443:CDS | 55.0% | |
| GATCATCAGCGAGGCCCAAT+GGG | - | chr6.3:6560256-6560275 | None:intergenic | 55.0% | |
| GTGGAGGGTTACCGTATTGC+TGG | + | chr6.3:6560179-6560198 | MS.gene20443:CDS | 55.0% | |
| GTTCTCCAGAGGTCCCTTTC+CGG | - | chr6.3:6560372-6560391 | None:intergenic | 55.0% | |
| TCGAGGTCATCCACAGCAGA+TGG | + | chr6.3:6559958-6559977 | MS.gene20443:CDS | 55.0% | |
| TGGCGAAGCTGTGTGGTTCA+AGG | + | chr6.3:6560043-6560062 | MS.gene20443:CDS | 55.0% | |
| TGGGCTATGTTGGGTGCCTT+GGG | + | chr6.3:6559978-6559997 | MS.gene20443:CDS | 55.0% | |
| TGGTCAGCAAGGTTCTCCAG+AGG | - | chr6.3:6560383-6560402 | None:intergenic | 55.0% | |
| TGTAACCGGAAAGGGACCTC+TGG | + | chr6.3:6560364-6560383 | MS.gene20443:CDS | 55.0% | |
| ! | AGCCCACGCGTTGTTGTTGA+CGG | - | chr6.3:6560417-6560436 | None:intergenic | 55.0% |
| ! | ATGGGCTATGTTGGGTGCCT+TGG | + | chr6.3:6559977-6559996 | MS.gene20443:CDS | 55.0% |
| ! | CATGCCAAGGTCTGGAGTAG+AGG | - | chr6.3:6559736-6559755 | None:intergenic | 55.0% |
| ! | CGTATTGCTGGTGGACCTCT+TGG | + | chr6.3:6560191-6560210 | MS.gene20443:CDS | 55.0% |
| ! | TGCCAAGGTCTGGAGTAGAG+GGG | - | chr6.3:6559734-6559753 | None:intergenic | 55.0% |
| !! | CCACAGCAGATGGGCTATGT+TGG | + | chr6.3:6559968-6559987 | MS.gene20443:CDS | 55.0% |
| ACACGGTCTGGACCGTACCA+TGG | - | chr6.3:6559813-6559832 | None:intergenic | 60.0% | |
| ACCCCGTCAACAACAACGCG+TGG | + | chr6.3:6560411-6560430 | MS.gene20443:CDS | 60.0% | |
| CCATTGCGAGCCAAGAGCTC+AGG | - | chr6.3:6560014-6560033 | None:intergenic | 60.0% | |
| CCCCGTCAACAACAACGCGT+GGG | + | chr6.3:6560412-6560431 | MS.gene20443:CDS | 60.0% | |
| CTCTGGGTCAGCAGAAAGCC+CGG | - | chr6.3:6559916-6559935 | None:intergenic | 60.0% | |
| GGATCATCAGCGAGGCCCAA+TGG | - | chr6.3:6560257-6560276 | None:intergenic | 60.0% | |
| GGGTCGACTACCTCACCAAG+AGG | - | chr6.3:6560209-6560228 | None:intergenic | 60.0% | |
| GTAGTCGACCCACTCTACCC+AGG | + | chr6.3:6560218-6560237 | MS.gene20443:CDS | 60.0% | |
| TCCCCCTCTACTCCAGACCT+TGG | + | chr6.3:6559729-6559748 | MS.gene20443:CDS | 60.0% | |
| ! | CCCACGCGTTGTTGTTGACG+GGG | - | chr6.3:6560415-6560434 | None:intergenic | 60.0% |
| ! | CCTGAGCTCTTGGCTCGCAA+TGG | + | chr6.3:6560011-6560030 | MS.gene20443:CDS | 60.0% |
| ! | GCCAAGGTCTGGAGTAGAGG+GGG | - | chr6.3:6559733-6559752 | None:intergenic | 60.0% |
| ! | GCCCACGCGTTGTTGTTGAC+GGG | - | chr6.3:6560416-6560435 | None:intergenic | 60.0% |
| ! | TGCTGGTGGACCTCTTGGTG+AGG | + | chr6.3:6560196-6560215 | MS.gene20443:CDS | 60.0% |
| GGGCCTCGCTGATGATCCAG+AGG | + | chr6.3:6560259-6560278 | MS.gene20443:CDS | 65.0% | |
| GTCGACCCACTCTACCCAGG+TGG | + | chr6.3:6560221-6560240 | MS.gene20443:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 6559669 | 6560466 | 6559669 | ID=MS.gene20443 |
| chr6.3 | mRNA | 6559669 | 6560466 | 6559669 | ID=MS.gene20443.t1;Parent=MS.gene20443 |
| chr6.3 | exon | 6559669 | 6560466 | 6559669 | ID=MS.gene20443.t1.exon1;Parent=MS.gene20443.t1 |
| chr6.3 | CDS | 6559669 | 6560466 | 6559669 | ID=cds.MS.gene20443.t1;Parent=MS.gene20443.t1 |
| Gene Sequence |
| Protein sequence |
