Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38214.t1 | XP_003617948.1 | 99.6 | 265 | 1 | 0 | 1 | 265 | 1 | 265 | 9.00E-154 | 552.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38214.t1 | P27520 | 96.6 | 265 | 9 | 0 | 1 | 265 | 1 | 265 | 7.7e-154 | 544.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38214.t1 | G7KEN2 | 99.6 | 265 | 1 | 0 | 1 | 265 | 1 | 265 | 6.5e-154 | 552.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene38214 | 0.870787 | 1.12E-66 | -1.69E-46 |
| MS.gene049173 | MS.gene38214 | 0.838004 | 3.72E-57 | -1.69E-46 |
| MS.gene049181 | MS.gene38214 | -0.815292 | 9.96E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene38214 | 0.838794 | 2.33E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene38214 | 0.867811 | 1.04E-65 | -1.69E-46 |
| MS.gene049232 | MS.gene38214 | 0.907068 | 7.55E-81 | -1.69E-46 |
| MS.gene049285 | MS.gene38214 | 0.909224 | 7.22E-82 | -1.69E-46 |
| MS.gene049312 | MS.gene38214 | -0.808915 | 2.45E-50 | -1.69E-46 |
| MS.gene049313 | MS.gene38214 | -0.801259 | 9.79E-49 | -1.69E-46 |
| MS.gene049320 | MS.gene38214 | 0.933202 | 2.69E-95 | -1.69E-46 |
| MS.gene04939 | MS.gene38214 | 0.813663 | 2.28E-51 | -1.69E-46 |
| MS.gene049483 | MS.gene38214 | -0.803768 | 2.98E-49 | -1.69E-46 |
| MS.gene049600 | MS.gene38214 | 0.851564 | 8.17E-61 | -1.69E-46 |
| MS.gene049609 | MS.gene38214 | 0.827317 | 1.67E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene38214 | 0.808473 | 3.04E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene38214 | 0.837879 | 4.01E-57 | -1.69E-46 |
| MS.gene049865 | MS.gene38214 | 0.801986 | 6.95E-49 | -1.69E-46 |
| MS.gene04986 | MS.gene38214 | -0.806057 | 9.89E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene38214 | 0.922348 | 1.11E-88 | -1.69E-46 |
| MS.gene050163 | MS.gene38214 | 0.884756 | 1.46E-71 | -1.69E-46 |
| MS.gene050165 | MS.gene38214 | 0.889164 | 3.09E-73 | -1.69E-46 |
| MS.gene050170 | MS.gene38214 | 0.845649 | 3.56E-59 | -1.69E-46 |
| MS.gene050216 | MS.gene38214 | 0.869486 | 2.99E-66 | -1.69E-46 |
| MS.gene050323 | MS.gene38214 | 0.876628 | 1.20E-68 | -1.69E-46 |
| MS.gene050333 | MS.gene38214 | 0.870224 | 1.71E-66 | -1.69E-46 |
| MS.gene050381 | MS.gene38214 | -0.822194 | 2.70E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene38214 | 0.882052 | 1.44E-70 | -1.69E-46 |
| MS.gene050504 | MS.gene38214 | 0.92451 | 6.40E-90 | -1.69E-46 |
| MS.gene050518 | MS.gene38214 | 0.906798 | 1.01E-80 | -1.69E-46 |
| MS.gene050577 | MS.gene38214 | 0.865437 | 5.91E-65 | -1.69E-46 |
| MS.gene050612 | MS.gene38214 | 0.925468 | 1.76E-90 | -1.69E-46 |
| MS.gene050662 | MS.gene38214 | 0.827697 | 1.36E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene38214 | 0.888674 | 4.79E-73 | -1.69E-46 |
| MS.gene050699 | MS.gene38214 | 0.895388 | 1.00E-75 | -1.69E-46 |
| MS.gene050747 | MS.gene38214 | 0.80925 | 2.08E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene38214 | 0.872691 | 2.62E-67 | -1.69E-46 |
| MS.gene05080 | MS.gene38214 | 0.845719 | 3.41E-59 | -1.69E-46 |
| MS.gene050868 | MS.gene38214 | 0.871637 | 5.87E-67 | -1.69E-46 |
| MS.gene050871 | MS.gene38214 | 0.871659 | 5.78E-67 | -1.69E-46 |
| MS.gene050876 | MS.gene38214 | 0.852694 | 3.90E-61 | -1.69E-46 |
| MS.gene050883 | MS.gene38214 | -0.819189 | 1.32E-52 | -1.69E-46 |
| MS.gene050904 | MS.gene38214 | 0.822883 | 1.87E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene38214 | 0.806731 | 7.13E-50 | -1.69E-46 |
| MS.gene050986 | MS.gene38214 | 0.945032 | 6.51E-104 | -1.69E-46 |
| MS.gene05100 | MS.gene38214 | 0.850544 | 1.59E-60 | -1.69E-46 |
| MS.gene051127 | MS.gene38214 | -0.828192 | 1.03E-54 | -1.69E-46 |
| MS.gene05118 | MS.gene38214 | 0.818891 | 1.55E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene38214 | 0.834612 | 2.71E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene38214 | 0.83067 | 2.58E-55 | -1.69E-46 |
| MS.gene051509 | MS.gene38214 | 0.866845 | 2.12E-65 | -1.69E-46 |
| MS.gene051551 | MS.gene38214 | 0.899598 | 1.69E-77 | -1.69E-46 |
| MS.gene051810 | MS.gene38214 | 0.881664 | 1.99E-70 | -1.69E-46 |
| MS.gene051949 | MS.gene38214 | 0.820302 | 7.37E-53 | -1.69E-46 |
| MS.gene052066 | MS.gene38214 | 0.805414 | 1.35E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene38214 | 0.875553 | 2.81E-68 | -1.69E-46 |
| MS.gene052271 | MS.gene38214 | 0.826472 | 2.66E-54 | -1.69E-46 |
| MS.gene052482 | MS.gene38214 | 0.866555 | 2.62E-65 | -1.69E-46 |
| MS.gene052486 | MS.gene38214 | 0.868922 | 4.55E-66 | -1.69E-46 |
| MS.gene052503 | MS.gene38214 | 0.819555 | 1.09E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene38214 | 0.818108 | 2.33E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene38214 | 0.810824 | 9.51E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene38214 | 0.83569 | 1.45E-56 | -1.69E-46 |
| MS.gene052823 | MS.gene38214 | 0.815862 | 7.44E-52 | -1.69E-46 |
| MS.gene052825 | MS.gene38214 | 0.806925 | 6.49E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene38214 | 0.839688 | 1.36E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene38214 | 0.854145 | 1.50E-61 | -1.69E-46 |
| MS.gene053018 | MS.gene38214 | 0.812021 | 5.23E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene38214 | 0.851948 | 6.36E-61 | -1.69E-46 |
| MS.gene053207 | MS.gene38214 | 0.818589 | 1.81E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene38214 | 0.882336 | 1.13E-70 | -1.69E-46 |
| MS.gene053286 | MS.gene38214 | 0.88919 | 3.02E-73 | -1.69E-46 |
| MS.gene053420 | MS.gene38214 | -0.821161 | 4.68E-53 | -1.69E-46 |
| MS.gene053436 | MS.gene38214 | 0.837006 | 6.70E-57 | -1.69E-46 |
| MS.gene053480 | MS.gene38214 | 0.805749 | 1.15E-49 | -1.69E-46 |
| MS.gene053549 | MS.gene38214 | -0.80976 | 1.61E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene38214 | -0.815941 | 7.14E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene38214 | 0.863631 | 2.17E-64 | -1.69E-46 |
| MS.gene053626 | MS.gene38214 | 0.831326 | 1.78E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene38214 | 0.836509 | 8.98E-57 | -1.69E-46 |
| MS.gene053633 | MS.gene38214 | 0.826208 | 3.08E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene38214 | 0.817168 | 3.79E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene38214 | 0.830415 | 2.97E-55 | -1.69E-46 |
| MS.gene054003 | MS.gene38214 | 0.809153 | 2.18E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene38214 | 0.800862 | 1.18E-48 | -1.69E-46 |
| MS.gene054595 | MS.gene38214 | 0.851901 | 6.56E-61 | -1.69E-46 |
| MS.gene054600 | MS.gene38214 | 0.862204 | 5.98E-64 | -1.69E-46 |
| MS.gene054616 | MS.gene38214 | -0.819689 | 1.02E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene38214 | 0.892877 | 1.06E-74 | -1.69E-46 |
| MS.gene05470 | MS.gene38214 | 0.856628 | 2.83E-62 | -1.69E-46 |
| MS.gene054954 | MS.gene38214 | 0.936994 | 7.11E-98 | -1.69E-46 |
| MS.gene055154 | MS.gene38214 | -0.828516 | 8.61E-55 | -1.69E-46 |
| MS.gene055212 | MS.gene38214 | 0.819968 | 8.79E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene38214 | 0.929935 | 3.40E-93 | -1.69E-46 |
| MS.gene055502 | MS.gene38214 | 0.885144 | 1.05E-71 | -1.69E-46 |
| MS.gene055577 | MS.gene38214 | 0.85295 | 3.30E-61 | -1.69E-46 |
| MS.gene055634 | MS.gene38214 | 0.846832 | 1.69E-59 | -1.69E-46 |
| MS.gene055638 | MS.gene38214 | 0.822968 | 1.78E-53 | -1.69E-46 |
| MS.gene055722 | MS.gene38214 | 0.850007 | 2.24E-60 | -1.69E-46 |
| MS.gene055748 | MS.gene38214 | 0.851102 | 1.10E-60 | -1.69E-46 |
| MS.gene055750 | MS.gene38214 | 0.863465 | 2.44E-64 | -1.69E-46 |
| MS.gene055751 | MS.gene38214 | 0.868838 | 4.85E-66 | -1.69E-46 |
| MS.gene055776 | MS.gene38214 | 0.943122 | 2.13E-102 | -1.69E-46 |
| MS.gene055849 | MS.gene38214 | 0.84898 | 4.34E-60 | -1.69E-46 |
| MS.gene05589 | MS.gene38214 | 0.873915 | 1.02E-67 | -1.69E-46 |
| MS.gene055941 | MS.gene38214 | 0.806365 | 8.52E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene38214 | -0.82695 | 2.05E-54 | -1.69E-46 |
| MS.gene056046 | MS.gene38214 | 0.85151 | 8.47E-61 | -1.69E-46 |
| MS.gene056374 | MS.gene38214 | 0.853285 | 2.64E-61 | -1.69E-46 |
| MS.gene056446 | MS.gene38214 | 0.817873 | 2.63E-52 | -1.69E-46 |
| MS.gene056450 | MS.gene38214 | 0.812643 | 3.82E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene38214 | 0.928205 | 4.01E-92 | -1.69E-46 |
| MS.gene056510 | MS.gene38214 | 0.916577 | 1.51E-85 | -1.69E-46 |
| MS.gene056657 | MS.gene38214 | 0.923761 | 1.73E-89 | -1.69E-46 |
| MS.gene056692 | MS.gene38214 | 0.820613 | 6.25E-53 | -1.69E-46 |
| MS.gene056761 | MS.gene38214 | -0.817904 | 2.59E-52 | -1.69E-46 |
| MS.gene056878 | MS.gene38214 | 0.847378 | 1.20E-59 | -1.69E-46 |
| MS.gene056898 | MS.gene38214 | 0.802608 | 5.18E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene38214 | -0.827871 | 1.23E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene38214 | 0.810613 | 1.06E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene38214 | 0.811199 | 7.89E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene38214 | 0.802944 | 4.41E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene38214 | 0.816725 | 4.77E-52 | -1.69E-46 |
| MS.gene05753 | MS.gene38214 | 0.808651 | 2.79E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene38214 | 0.822851 | 1.90E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene38214 | 0.814194 | 1.74E-51 | -1.69E-46 |
| MS.gene057872 | MS.gene38214 | 0.834829 | 2.39E-56 | -1.69E-46 |
| MS.gene05787 | MS.gene38214 | 0.815246 | 1.02E-51 | -1.69E-46 |
| MS.gene058171 | MS.gene38214 | -0.804443 | 2.15E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene38214 | -0.804624 | 1.98E-49 | -1.69E-46 |
| MS.gene058183 | MS.gene38214 | 0.804132 | 2.50E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene38214 | -0.814994 | 1.16E-51 | -1.69E-46 |
| MS.gene058335 | MS.gene38214 | 0.803361 | 3.62E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene38214 | 0.826275 | 2.97E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene38214 | 0.904565 | 1.07E-79 | -1.69E-46 |
| MS.gene058544 | MS.gene38214 | 0.843164 | 1.66E-58 | -1.69E-46 |
| MS.gene058719 | MS.gene38214 | 0.840832 | 6.86E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene38214 | 0.844253 | 8.48E-59 | -1.69E-46 |
| MS.gene058773 | MS.gene38214 | 0.888876 | 4.00E-73 | -1.69E-46 |
| MS.gene058978 | MS.gene38214 | -0.808791 | 2.60E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene38214 | 0.93854 | 5.69E-99 | -1.69E-46 |
| MS.gene059023 | MS.gene38214 | 0.835187 | 1.94E-56 | -1.69E-46 |
| MS.gene059029 | MS.gene38214 | 0.806999 | 6.26E-50 | -1.69E-46 |
| MS.gene059034 | MS.gene38214 | 0.815855 | 7.47E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene38214 | 0.866276 | 3.21E-65 | -1.69E-46 |
| MS.gene059367 | MS.gene38214 | 0.857813 | 1.26E-62 | -1.69E-46 |
| MS.gene059667 | MS.gene38214 | 0.820798 | 5.67E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene38214 | 0.909417 | 5.83E-82 | -1.69E-46 |
| MS.gene059718 | MS.gene38214 | 0.884069 | 2.63E-71 | -1.69E-46 |
| MS.gene059756 | MS.gene38214 | 0.825323 | 4.99E-54 | -1.69E-46 |
| MS.gene059801 | MS.gene38214 | 0.804512 | 2.08E-49 | -1.69E-46 |
| MS.gene059837 | MS.gene38214 | 0.858856 | 6.18E-63 | -1.69E-46 |
| MS.gene059865 | MS.gene38214 | 0.935923 | 3.95E-97 | -1.69E-46 |
| MS.gene06000 | MS.gene38214 | 0.8365 | 9.02E-57 | -1.69E-46 |
| MS.gene060295 | MS.gene38214 | 0.808074 | 3.70E-50 | -1.69E-46 |
| MS.gene060337 | MS.gene38214 | -0.828351 | 9.43E-55 | -1.69E-46 |
| MS.gene060341 | MS.gene38214 | 0.809656 | 1.70E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene38214 | 0.858244 | 9.41E-63 | -1.69E-46 |
| MS.gene060595 | MS.gene38214 | -0.826984 | 2.01E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene38214 | 0.90716 | 6.84E-81 | -1.69E-46 |
| MS.gene060728 | MS.gene38214 | 0.808355 | 3.23E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene38214 | 0.875438 | 3.08E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene38214 | 0.891706 | 3.11E-74 | -1.69E-46 |
| MS.gene06077 | MS.gene38214 | 0.899123 | 2.71E-77 | -1.69E-46 |
| MS.gene06097 | MS.gene38214 | 0.804923 | 1.71E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene38214 | 0.894736 | 1.86E-75 | -1.69E-46 |
| MS.gene061134 | MS.gene38214 | 0.813939 | 1.99E-51 | -1.69E-46 |
| MS.gene061150 | MS.gene38214 | 0.826158 | 3.16E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene38214 | MS.gene028321 | PPI |
| MS.gene38214 | MS.gene031030 | PPI |
| MS.gene38214 | MS.gene20444 | PPI |
| MS.gene38214 | MS.gene81230 | PPI |
| MS.gene36470 | MS.gene38214 | PPI |
| MS.gene023132 | MS.gene38214 | PPI |
| MS.gene38214 | MS.gene35137 | PPI |
| MS.gene031016 | MS.gene38214 | PPI |
| MS.gene99767 | MS.gene38214 | PPI |
| MS.gene031028 | MS.gene38214 | PPI |
| MS.gene38214 | MS.gene88379 | PPI |
| MS.gene38214 | MS.gene031355 | PPI |
| MS.gene20444 | MS.gene38214 | PPI |
| MS.gene38214 | MS.gene031016 | PPI |
| MS.gene81230 | MS.gene38214 | PPI |
| MS.gene38046 | MS.gene38214 | PPI |
| MS.gene38214 | MS.gene023132 | PPI |
| MS.gene38214 | MS.gene38046 | PPI |
| MS.gene20446 | MS.gene38214 | PPI |
| MS.gene38214 | MS.gene020883 | PPI |
| MS.gene38214 | MS.gene031028 | PPI |
| MS.gene38214 | MS.gene20445 | PPI |
| MS.gene38214 | MS.gene20443 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38214.t1 | MTR_5g097280 | 99.623 | 265 | 1 | 0 | 1 | 265 | 1 | 265 | 0.0 | 540 |
| MS.gene38214.t1 | MTR_4g094605 | 82.500 | 240 | 38 | 1 | 30 | 265 | 27 | 266 | 6.49e-149 | 417 |
| MS.gene38214.t1 | MTR_6g012080 | 75.373 | 268 | 60 | 3 | 1 | 265 | 1 | 265 | 1.05e-147 | 414 |
| MS.gene38214.t1 | MTR_6g011870 | 82.500 | 240 | 39 | 2 | 29 | 265 | 26 | 265 | 4.16e-147 | 412 |
| MS.gene38214.t1 | MTR_6g011880 | 82.083 | 240 | 40 | 2 | 29 | 265 | 26 | 265 | 6.82e-147 | 412 |
| MS.gene38214.t1 | MTR_6g011890 | 83.404 | 235 | 36 | 2 | 34 | 265 | 31 | 265 | 1.21e-146 | 411 |
| MS.gene38214.t1 | MTR_6g012110 | 75.281 | 267 | 58 | 3 | 2 | 265 | 4 | 265 | 6.43e-145 | 407 |
| MS.gene38214.t1 | MTR_2g081090 | 70.076 | 264 | 66 | 6 | 5 | 265 | 11 | 264 | 3.23e-124 | 354 |
| MS.gene38214.t1 | MTR_2g081090 | 78.027 | 223 | 45 | 4 | 46 | 265 | 16 | 237 | 1.18e-121 | 347 |
| MS.gene38214.t1 | MTR_6g043600 | 71.489 | 235 | 47 | 1 | 31 | 265 | 15 | 229 | 4.14e-119 | 340 |
| MS.gene38214.t1 | MTR_6g060175 | 54.067 | 209 | 87 | 4 | 49 | 253 | 71 | 274 | 3.56e-62 | 197 |
| MS.gene38214.t1 | MTR_1g026550 | 45.817 | 251 | 118 | 7 | 17 | 253 | 76 | 322 | 6.63e-62 | 198 |
| MS.gene38214.t1 | MTR_6g060175 | 52.153 | 209 | 81 | 5 | 49 | 253 | 71 | 264 | 7.32e-56 | 181 |
| MS.gene38214.t1 | MTR_5g098785 | 42.857 | 217 | 89 | 10 | 62 | 253 | 63 | 269 | 5.17e-37 | 132 |
| MS.gene38214.t1 | MTR_5g098780 | 41.935 | 217 | 91 | 9 | 62 | 253 | 61 | 267 | 2.32e-36 | 130 |
| MS.gene38214.t1 | MTR_3g101670 | 41.146 | 192 | 99 | 4 | 66 | 249 | 68 | 253 | 6.64e-36 | 129 |
| MS.gene38214.t1 | MTR_8g023790 | 37.069 | 232 | 107 | 9 | 34 | 249 | 48 | 256 | 8.50e-36 | 129 |
| MS.gene38214.t1 | MTR_6g033320 | 39.655 | 232 | 102 | 9 | 27 | 253 | 35 | 233 | 2.12e-35 | 127 |
| MS.gene38214.t1 | MTR_2g042720 | 36.444 | 225 | 109 | 9 | 52 | 260 | 60 | 266 | 1.30e-31 | 117 |
| MS.gene38214.t1 | MTR_1g026550 | 39.490 | 157 | 90 | 4 | 16 | 168 | 75 | 230 | 2.34e-29 | 111 |
| MS.gene38214.t1 | MTR_3g435460 | 34.826 | 201 | 97 | 6 | 66 | 252 | 63 | 243 | 1.07e-27 | 107 |
| MS.gene38214.t1 | MTR_4g015570 | 42.593 | 162 | 72 | 7 | 93 | 250 | 134 | 278 | 1.74e-25 | 102 |
| MS.gene38214.t1 | MTR_3g435460 | 33.505 | 194 | 95 | 6 | 73 | 252 | 9 | 182 | 2.42e-24 | 97.1 |
| MS.gene38214.t1 | MTR_3g070340 | 44.371 | 151 | 63 | 8 | 93 | 239 | 137 | 270 | 8.99e-21 | 89.4 |
| MS.gene38214.t1 | MTR_5g098770 | 54.054 | 74 | 33 | 1 | 181 | 253 | 13 | 86 | 4.10e-20 | 82.8 |
| MS.gene38214.t1 | MTR_2g008610 | 32.850 | 207 | 89 | 7 | 66 | 242 | 73 | 259 | 1.57e-17 | 80.1 |
| MS.gene38214.t1 | MTR_2g436960 | 48.438 | 64 | 29 | 1 | 189 | 252 | 33 | 92 | 2.62e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38214.t1 | AT2G05100 | 86.792 | 265 | 35 | 0 | 1 | 265 | 1 | 265 | 2.73e-176 | 486 |
| MS.gene38214.t1 | AT2G05070 | 86.038 | 265 | 37 | 0 | 1 | 265 | 1 | 265 | 2.32e-175 | 484 |
| MS.gene38214.t1 | AT3G27690 | 85.714 | 266 | 37 | 1 | 1 | 265 | 33 | 298 | 1.22e-173 | 481 |
| MS.gene38214.t1 | AT3G27690 | 85.714 | 266 | 37 | 1 | 1 | 265 | 1 | 266 | 2.25e-173 | 479 |
| MS.gene38214.t1 | AT2G05100 | 86.920 | 237 | 31 | 0 | 1 | 237 | 1 | 237 | 7.15e-153 | 429 |
| MS.gene38214.t1 | AT2G34420 | 75.746 | 268 | 55 | 3 | 2 | 265 | 4 | 265 | 5.00e-144 | 404 |
| MS.gene38214.t1 | AT1G29920 | 76.119 | 268 | 56 | 3 | 2 | 265 | 4 | 267 | 5.93e-144 | 404 |
| MS.gene38214.t1 | AT1G29910 | 76.119 | 268 | 56 | 3 | 2 | 265 | 4 | 267 | 5.93e-144 | 404 |
| MS.gene38214.t1 | AT1G29930 | 75.836 | 269 | 55 | 4 | 2 | 265 | 4 | 267 | 9.71e-144 | 404 |
| MS.gene38214.t1 | AT2G34430 | 76.119 | 268 | 55 | 5 | 2 | 265 | 4 | 266 | 7.27e-143 | 402 |
| MS.gene38214.t1 | AT5G54270 | 67.293 | 266 | 75 | 6 | 2 | 264 | 8 | 264 | 2.94e-121 | 347 |
| MS.gene38214.t1 | AT1G76570 | 44.776 | 268 | 129 | 7 | 2 | 256 | 62 | 323 | 2.68e-62 | 199 |
| MS.gene38214.t1 | AT4G10340 | 52.632 | 209 | 90 | 5 | 49 | 253 | 62 | 265 | 1.76e-57 | 185 |
| MS.gene38214.t1 | AT1G45474 | 41.969 | 193 | 97 | 4 | 66 | 249 | 56 | 242 | 5.30e-38 | 134 |
| MS.gene38214.t1 | AT1G45474 | 41.969 | 193 | 97 | 4 | 66 | 249 | 56 | 242 | 5.30e-38 | 134 |
| MS.gene38214.t1 | AT1G61520 | 40.486 | 247 | 107 | 12 | 32 | 253 | 34 | 265 | 6.74e-38 | 134 |
| MS.gene38214.t1 | AT1G61520 | 40.486 | 247 | 107 | 12 | 32 | 253 | 34 | 265 | 6.74e-38 | 134 |
| MS.gene38214.t1 | AT3G54890 | 43.367 | 196 | 91 | 6 | 63 | 253 | 52 | 232 | 9.97e-37 | 130 |
| MS.gene38214.t1 | AT3G61470 | 39.024 | 205 | 109 | 6 | 52 | 249 | 50 | 245 | 3.88e-36 | 129 |
| MS.gene38214.t1 | AT1G61520 | 42.308 | 208 | 85 | 10 | 72 | 254 | 14 | 211 | 1.81e-33 | 121 |
| MS.gene38214.t1 | AT1G19150 | 34.222 | 225 | 114 | 7 | 52 | 260 | 63 | 269 | 1.53e-29 | 112 |
| MS.gene38214.t1 | AT3G47470 | 38.342 | 193 | 101 | 6 | 66 | 252 | 64 | 244 | 2.27e-28 | 108 |
| MS.gene38214.t1 | AT3G08940 | 34.201 | 269 | 107 | 12 | 33 | 250 | 27 | 276 | 3.18e-26 | 104 |
| MS.gene38214.t1 | AT3G54890 | 41.875 | 160 | 74 | 5 | 63 | 218 | 52 | 196 | 3.80e-25 | 99.8 |
| MS.gene38214.t1 | AT5G01530 | 41.212 | 165 | 76 | 7 | 93 | 253 | 135 | 282 | 4.79e-25 | 101 |
| MS.gene38214.t1 | AT2G40100 | 43.137 | 153 | 67 | 7 | 93 | 242 | 136 | 271 | 7.08e-23 | 95.1 |
| MS.gene38214.t1 | AT3G54890 | 35.233 | 193 | 77 | 5 | 63 | 253 | 52 | 198 | 2.01e-22 | 92.4 |
| MS.gene38214.t1 | AT1G15820 | 30.916 | 262 | 123 | 9 | 15 | 242 | 19 | 256 | 5.35e-18 | 81.3 |
| MS.gene38214.t1 | AT5G28450 | 52.941 | 68 | 30 | 2 | 184 | 249 | 94 | 161 | 4.89e-14 | 68.9 |
| MS.gene38214.t1 | AT3G54890 | 43.182 | 88 | 42 | 2 | 63 | 149 | 52 | 132 | 2.18e-11 | 61.2 |
Find 107 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTTCCTTGCAAAGGTTTC+AGG | 0.062967 | 5.3:-78613790 | None:intergenic |
| TGAGGGTGGCCTTGACTATT+TGG | 0.150483 | 5.3:+78613945 | MS.gene38214:CDS |
| GGTGAATTTCCTGGTGATTA+TGG | 0.253991 | 5.3:+78613739 | MS.gene38214:CDS |
| CGGTGAGGCTGTGTGGTTTA+AGG | 0.263630 | 5.3:+78613903 | MS.gene38214:CDS |
| TTTGTTCAAGCCATTGTTAC+TGG | 0.264682 | 5.3:+78614210 | MS.gene38214:CDS |
| CTCAGAGCATTCTTGCAATC+TGG | 0.295339 | 5.3:+78613989 | MS.gene38214:CDS |
| CTCTGAGCATGGATCAGGTT+TGG | 0.324151 | 5.3:-78613973 | None:intergenic |
| GTCTTGGCGTTCTCATTGTC+CGG | 0.330962 | 5.3:-78614316 | None:intergenic |
| TTGGCTATGTTCTCCATGTT+TGG | 0.341425 | 5.3:+78614183 | MS.gene38214:CDS |
| GAGGGTGGCCTTGACTATTT+GGG | 0.341818 | 5.3:+78613946 | MS.gene38214:CDS |
| TTCAACTCTGCGAATGCATC+AGG | 0.344835 | 5.3:-78614135 | None:intergenic |
| GGCCACCCTCAGAGAAGATC+TGG | 0.361782 | 5.3:-78613933 | None:intergenic |
| TGCCAGTGAATGCTGATTGT+TGG | 0.367235 | 5.3:-78613237 | None:intergenic |
| CCGTTCTTCTCAAGGATCTC+AGG | 0.374661 | 5.3:-78613871 | None:intergenic |
| TCCTGACCGTCCCAAGTACT+TGG | 0.389665 | 5.3:+78613681 | MS.gene38214:CDS |
| GCCCATGCGTTGTTGGCGAC+AGG | 0.394359 | 5.3:-78614273 | None:intergenic |
| GGCTACACAGGTTGTGCTCA+TGG | 0.400913 | 5.3:+78614011 | MS.gene38214:CDS |
| TCTGAGCATGGATCAGGTTT+GGG | 0.410646 | 5.3:-78613972 | None:intergenic |
| GAGAAGAACGGTGTTAAATT+CGG | 0.410939 | 5.3:+78613883 | MS.gene38214:CDS |
| TCTTGGCGTTCTCATTGTCC+GGG | 0.416065 | 5.3:-78614315 | None:intergenic |
| TGGTCGTAAAGGTTCTGAAC+AGG | 0.417502 | 5.3:-78614240 | None:intergenic |
| TGGGCTATGCTTGGTGCATT+GGG | 0.418579 | 5.3:+78613838 | MS.gene38214:CDS |
| GGTGGTGCCTTTGACCCTCT+TGG | 0.419230 | 5.3:+78614099 | MS.gene38214:CDS |
| AGCATATGCCCATGCGTTGT+TGG | 0.419884 | 5.3:-78614280 | None:intergenic |
| GTGCTCATGGGATTTGTTGA+AGG | 0.427865 | 5.3:+78614024 | MS.gene38214:CDS |
| ATGGGCTATGCTTGGTGCAT+TGG | 0.428620 | 5.3:+78613837 | MS.gene38214:CDS |
| AACAAGGAAATGAGTTCATC+AGG | 0.436049 | 5.3:+78613272 | MS.gene38214:CDS |
| AGAGTGCTCCTGAGAGCATT+TGG | 0.436155 | 5.3:+78613344 | MS.gene38214:CDS |
| ATCAGGAAAGCTGGTAACTT+TGG | 0.441484 | 5.3:+78613289 | MS.gene38214:CDS |
| TACTTGACTGGTGAATTTCC+TGG | 0.447995 | 5.3:+78613730 | MS.gene38214:CDS |
| TGATGCATTCGCAGAGTTGA+AGG | 0.448661 | 5.3:+78614137 | MS.gene38214:CDS |
| AGAGAACGGACCCAAGTACT+TGG | 0.456761 | 5.3:-78613692 | None:intergenic |
| GAATGCTCTGAGCATGGATC+AGG | 0.464537 | 5.3:-78613978 | None:intergenic |
| TCAGCATTCACTGGCAAGAC+TGG | 0.471182 | 5.3:+78613244 | MS.gene38214:CDS |
| TCAGAGCATTCTTGCAATCT+GGG | 0.473136 | 5.3:+78613990 | MS.gene38214:CDS |
| ACCCTGTCGCCAACAACGCA+TGG | 0.473833 | 5.3:+78614271 | MS.gene38214:CDS |
| TTGAAGTAATTCACAGCAGA+TGG | 0.482906 | 5.3:+78613818 | MS.gene38214:CDS |
| CCCAAGTACTTGGGACGGTC+AGG | 0.484537 | 5.3:-78613682 | None:intergenic |
| GGTTCCTTGCAAAGGTTTCA+GGG | 0.488153 | 5.3:-78613789 | None:intergenic |
| AAGGCACCACCAGGGTATAG+TGG | 0.492859 | 5.3:-78614087 | None:intergenic |
| GTTGAAGGCTACAGAGTTGG+TGG | 0.494755 | 5.3:+78614039 | MS.gene38214:CDS |
| CACAGCAGATGGGCTATGCT+TGG | 0.495212 | 5.3:+78613829 | MS.gene38214:CDS |
| CAAGCCATTGTTACTGGCAA+GGG | 0.504441 | 5.3:+78614216 | MS.gene38214:CDS |
| AAGCTCACGGTTCCTTGCAA+AGG | 0.505875 | 5.3:-78613797 | None:intergenic |
| AATGAGTTCATCAGGAAAGC+TGG | 0.507285 | 5.3:+78613280 | MS.gene38214:CDS |
| AATTCACCAGTCAAGTATGA+TGG | 0.511054 | 5.3:-78613724 | None:intergenic |
| ATTTAACACCGTTCTTCTCA+AGG | 0.517683 | 5.3:-78613879 | None:intergenic |
| GCTACACAGGTTGTGCTCAT+GGG | 0.523866 | 5.3:+78614012 | MS.gene38214:CDS |
| CAAATTCCATCATACTTGAC+TGG | 0.527526 | 5.3:+78613718 | MS.gene38214:CDS |
| GGTCAGCAACATGGTCGTAA+AGG | 0.529520 | 5.3:-78614251 | None:intergenic |
| AATTTCCTGGTGATTATGGA+TGG | 0.532844 | 5.3:+78613743 | MS.gene38214:CDS |
| GGTGCCCAGATCTTCTCTGA+GGG | 0.535317 | 5.3:+78613928 | MS.gene38214:CDS |
| CCCATGCGTTGTTGGCGACA+GGG | 0.536409 | 5.3:-78614272 | None:intergenic |
| ACTACTTACCAAATGCTCTC+AGG | 0.536679 | 5.3:-78613352 | None:intergenic |
| CCCTGTCGCCAACAACGCAT+GGG | 0.536908 | 5.3:+78614272 | MS.gene38214:CDS |
| AGCAAGACCAAGAGGGTCAA+AGG | 0.536924 | 5.3:-78614106 | None:intergenic |
| TCAAGCCATTGTTACTGGCA+AGG | 0.539300 | 5.3:+78614215 | MS.gene38214:CDS |
| CGTTCTTCTCAAGGATCTCA+GGG | 0.541586 | 5.3:-78613870 | None:intergenic |
| AGAGGGTCAAAGGCACCACC+AGG | 0.542069 | 5.3:-78614096 | None:intergenic |
| GCCCAGATCTTCTCTGAGGG+TGG | 0.543898 | 5.3:+78613931 | MS.gene38214:CDS |
| GATTATGGATGGGACACAGC+TGG | 0.543956 | 5.3:+78613754 | MS.gene38214:CDS |
| TTTGTTGAAGGCTACAGAGT+TGG | 0.545933 | 5.3:+78614036 | MS.gene38214:CDS |
| TCTTGCAATCTGGGCTACAC+AGG | 0.546344 | 5.3:+78613999 | MS.gene38214:CDS |
| ATCCAACAATCAGCATTCAC+TGG | 0.556574 | 5.3:+78613235 | MS.gene38214:CDS |
| AGAGTTGGTGGAGGACCACT+TGG | 0.559575 | 5.3:+78614051 | MS.gene38214:CDS |
| GGAACTCAAGAACGGCCGAT+TGG | 0.563130 | 5.3:+78614164 | MS.gene38214:CDS |
| GAGGCTGTGTGGTTTAAGGC+TGG | 0.563162 | 5.3:+78613907 | MS.gene38214:CDS |
| TTGCAAGAATGCTCTGAGCA+TGG | 0.570179 | 5.3:-78613984 | None:intergenic |
| GGCAAGACTGGTTTGAAACA+AGG | 0.575215 | 5.3:+78613256 | MS.gene38214:CDS |
| ACATGGAGAACATAGCCAAT+CGG | 0.576833 | 5.3:-78614179 | None:intergenic |
| GATGGAATTTGTTCAGAGAA+CGG | 0.577342 | 5.3:-78613706 | None:intergenic |
| CCTGACCGTCCCAAGTACTT+GGG | 0.582931 | 5.3:+78613682 | MS.gene38214:CDS |
| AGGCACCACCAGGGTATAGT+GGG | 0.590141 | 5.3:-78614086 | None:intergenic |
| TGGTGCCCAGATCTTCTCTG+AGG | 0.590965 | 5.3:+78613927 | MS.gene38214:CDS |
| CCTGAGATCCTTGAGAAGAA+CGG | 0.593147 | 5.3:+78613871 | MS.gene38214:CDS |
| TGATTGTTGGATTGCAGAGG+TGG | 0.593510 | 5.3:-78613224 | None:intergenic |
| TGGCGACAGGGTCAGCAACA+TGG | 0.597357 | 5.3:-78614260 | None:intergenic |
| AGGGCCCTTGCCAGTAACAA+TGG | 0.597695 | 5.3:-78614220 | None:intergenic |
| TTGGGTTGCCCAAATAGTCA+AGG | 0.608462 | 5.3:-78613954 | None:intergenic |
| TGAAGTAATTCACAGCAGAT+GGG | 0.611387 | 5.3:+78613819 | MS.gene38214:CDS |
| GTGTCCCATCCATAATCACC+AGG | 0.613151 | 5.3:-78613748 | None:intergenic |
| GAGAACGGACCCAAGTACTT+GGG | 0.614753 | 5.3:-78613691 | None:intergenic |
| TATGCTACTAACTTCGTCCC+CGG | 0.620877 | 5.3:+78614297 | MS.gene38214:CDS |
| GCCACCCTCAGAGAAGATCT+GGG | 0.621572 | 5.3:-78613932 | None:intergenic |
| CTGACCCTGAAACCTTTGCA+AGG | 0.624240 | 5.3:+78613785 | MS.gene38214:CDS |
| GGTGGAGGACCACTTGGTGA+AGG | 0.624859 | 5.3:+78614057 | MS.gene38214:CDS |
| GGGTCTAGTCCTTCACCAAG+TGG | 0.625944 | 5.3:-78614066 | None:intergenic |
| TCAACTCTGCGAATGCATCA+GGG | 0.627212 | 5.3:-78614134 | None:intergenic |
| GGGTCATCAGCAAGACCAAG+AGG | 0.629020 | 5.3:-78614114 | None:intergenic |
| GGTCGTAAAGGTTCTGAACA+GGG | 0.631913 | 5.3:-78614239 | None:intergenic |
| ACTCTTCACAGTACGACGCA+TGG | 0.636134 | 5.3:-78613326 | None:intergenic |
| CTTCTCAAGGATCTCAGGGA+AGG | 0.637864 | 5.3:-78613866 | None:intergenic |
| TGCTGATTGTTGGATTGCAG+AGG | 0.642666 | 5.3:-78613227 | None:intergenic |
| ATTCGCAGAGTTGAAGGTCA+AGG | 0.644022 | 5.3:+78614143 | MS.gene38214:CDS |
| AAGGTCAAGGAACTCAAGAA+CGG | 0.645041 | 5.3:+78614156 | MS.gene38214:CDS |
| TGTGAATTACTTCAAGCTCA+CGG | 0.646318 | 5.3:-78613810 | None:intergenic |
| GAAGGCTACAGAGTTGGTGG+AGG | 0.651701 | 5.3:+78614042 | MS.gene38214:CDS |
| CTTGGCGTTCTCATTGTCCG+GGG | 0.655135 | 5.3:-78614314 | None:intergenic |
| TTAAATTCGGTGAGGCTGTG+TGG | 0.662485 | 5.3:+78613896 | MS.gene38214:CDS |
| ACGGACCCAAGTACTTGGGA+CGG | 0.662771 | 5.3:-78613687 | None:intergenic |
| ATTTCCTGGTGATTATGGAT+GGG | 0.670988 | 5.3:+78613744 | MS.gene38214:CDS |
| GGACTAGACCCACTATACCC+TGG | 0.675418 | 5.3:+78614078 | MS.gene38214:CDS |
| GGTCATCAGCAAGACCAAGA+GGG | 0.676366 | 5.3:-78614113 | None:intergenic |
| GAACGGTGTTAAATTCGGTG+AGG | 0.717704 | 5.3:+78613888 | MS.gene38214:CDS |
| GAGGGTCAAAGGCACCACCA+GGG | 0.717882 | 5.3:-78614095 | None:intergenic |
| TTGAACAAAGAAACCAAACA+TGG | 0.730913 | 5.3:-78614196 | None:intergenic |
| CTAGACCCACTATACCCTGG+TGG | 0.775578 | 5.3:+78614081 | MS.gene38214:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATAATTTTAGCTTTT+GGG | - | chr5.3:78613490-78613509 | None:intergenic | 10.0% |
| !!! | TTTATTATAATTTTAGCTTT+TGG | - | chr5.3:78613491-78613510 | None:intergenic | 10.0% |
| !! | ATGTGCTAATATTTGAAGTA+AGG | + | chr5.3:78613597-78613616 | MS.gene38214:intron | 25.0% |
| !! | TTGTTTTCATGTATTTGACT+TGG | + | chr5.3:78613630-78613649 | MS.gene38214:intron | 25.0% |
| CAAGAGTCATGATAAGATAA+AGG | - | chr5.3:78613431-78613450 | None:intergenic | 30.0% | |
| TTGAACAAAGAAACCAAACA+TGG | - | chr5.3:78614199-78614218 | None:intergenic | 30.0% | |
| !!! | TATGATCTGTTTTGAAAACC+AGG | + | chr5.3:78613653-78613672 | MS.gene38214:intron | 30.0% |
| AACAAGGAAATGAGTTCATC+AGG | + | chr5.3:78613272-78613291 | MS.gene38214:CDS | 35.0% | |
| AATTCACCAGTCAAGTATGA+TGG | - | chr5.3:78613727-78613746 | None:intergenic | 35.0% | |
| AATTTCCTGGTGATTATGGA+TGG | + | chr5.3:78613743-78613762 | MS.gene38214:CDS | 35.0% | |
| ATTTAACACCGTTCTTCTCA+AGG | - | chr5.3:78613882-78613901 | None:intergenic | 35.0% | |
| ATTTCCTGGTGATTATGGAT+GGG | + | chr5.3:78613744-78613763 | MS.gene38214:CDS | 35.0% | |
| CAAATTCCATCATACTTGAC+TGG | + | chr5.3:78613718-78613737 | MS.gene38214:CDS | 35.0% | |
| TGAAGTAATTCACAGCAGAT+GGG | + | chr5.3:78613819-78613838 | MS.gene38214:CDS | 35.0% | |
| TGTGAATTACTTCAAGCTCA+CGG | - | chr5.3:78613813-78613832 | None:intergenic | 35.0% | |
| TTGAAGTAATTCACAGCAGA+TGG | + | chr5.3:78613818-78613837 | MS.gene38214:CDS | 35.0% | |
| TTTGTTCAAGCCATTGTTAC+TGG | + | chr5.3:78614210-78614229 | MS.gene38214:CDS | 35.0% | |
| ! | GAGAAGAACGGTGTTAAATT+CGG | + | chr5.3:78613883-78613902 | MS.gene38214:CDS | 35.0% |
| ! | GATGGAATTTGTTCAGAGAA+CGG | - | chr5.3:78613709-78613728 | None:intergenic | 35.0% |
| !!! | TCTGTTTTGAAAACCAGGTA+TGG | + | chr5.3:78613658-78613677 | MS.gene38214:intron | 35.0% |
| AAGGTCAAGGAACTCAAGAA+CGG | + | chr5.3:78614156-78614175 | MS.gene38214:CDS | 40.0% | |
| AATGAGTTCATCAGGAAAGC+TGG | + | chr5.3:78613280-78613299 | MS.gene38214:CDS | 40.0% | |
| ACATGGAGAACATAGCCAAT+CGG | - | chr5.3:78614182-78614201 | None:intergenic | 40.0% | |
| ACTACTTACCAAATGCTCTC+AGG | - | chr5.3:78613355-78613374 | None:intergenic | 40.0% | |
| ATCAGGAAAGCTGGTAACTT+TGG | + | chr5.3:78613289-78613308 | MS.gene38214:CDS | 40.0% | |
| ATCCAACAATCAGCATTCAC+TGG | + | chr5.3:78613235-78613254 | MS.gene38214:CDS | 40.0% | |
| GGTGAATTTCCTGGTGATTA+TGG | + | chr5.3:78613739-78613758 | MS.gene38214:CDS | 40.0% | |
| TACTTGACTGGTGAATTTCC+TGG | + | chr5.3:78613730-78613749 | MS.gene38214:CDS | 40.0% | |
| TTGGCTATGTTCTCCATGTT+TGG | + | chr5.3:78614183-78614202 | MS.gene38214:CDS | 40.0% | |
| TTTGTTGAAGGCTACAGAGT+TGG | + | chr5.3:78614036-78614055 | MS.gene38214:CDS | 40.0% | |
| ! | TCAGAGCATTCTTGCAATCT+GGG | + | chr5.3:78613990-78614009 | MS.gene38214:CDS | 40.0% |
| ATTCGCAGAGTTGAAGGTCA+AGG | + | chr5.3:78614143-78614162 | MS.gene38214:CDS | 45.0% | |
| CAAGCCATTGTTACTGGCAA+GGG | + | chr5.3:78614216-78614235 | MS.gene38214:CDS | 45.0% | |
| CCTGAGATCCTTGAGAAGAA+CGG | + | chr5.3:78613871-78613890 | MS.gene38214:CDS | 45.0% | |
| CGTTCTTCTCAAGGATCTCA+GGG | - | chr5.3:78613873-78613892 | None:intergenic | 45.0% | |
| GGTTCCTTGCAAAGGTTTCA+GGG | - | chr5.3:78613792-78613811 | None:intergenic | 45.0% | |
| TATGCTACTAACTTCGTCCC+CGG | + | chr5.3:78614297-78614316 | MS.gene38214:CDS | 45.0% | |
| TCAACTCTGCGAATGCATCA+GGG | - | chr5.3:78614137-78614156 | None:intergenic | 45.0% | |
| TCAAGCCATTGTTACTGGCA+AGG | + | chr5.3:78614215-78614234 | MS.gene38214:CDS | 45.0% | |
| TCTGAGCATGGATCAGGTTT+GGG | - | chr5.3:78613975-78613994 | None:intergenic | 45.0% | |
| TGATGCATTCGCAGAGTTGA+AGG | + | chr5.3:78614137-78614156 | MS.gene38214:CDS | 45.0% | |
| TGATTGTTGGATTGCAGAGG+TGG | - | chr5.3:78613227-78613246 | None:intergenic | 45.0% | |
| TTCAACTCTGCGAATGCATC+AGG | - | chr5.3:78614138-78614157 | None:intergenic | 45.0% | |
| ! | CTCAGAGCATTCTTGCAATC+TGG | + | chr5.3:78613989-78614008 | MS.gene38214:CDS | 45.0% |
| ! | GAACGGTGTTAAATTCGGTG+AGG | + | chr5.3:78613888-78613907 | MS.gene38214:CDS | 45.0% |
| ! | TGCCAGTGAATGCTGATTGT+TGG | - | chr5.3:78613240-78613259 | None:intergenic | 45.0% |
| ! | TGCTGATTGTTGGATTGCAG+AGG | - | chr5.3:78613230-78613249 | None:intergenic | 45.0% |
| ! | TTAAATTCGGTGAGGCTGTG+TGG | + | chr5.3:78613896-78613915 | MS.gene38214:CDS | 45.0% |
| ! | TTGCAAGAATGCTCTGAGCA+TGG | - | chr5.3:78613987-78614006 | None:intergenic | 45.0% |
| ! | TTGGGTTGCCCAAATAGTCA+AGG | - | chr5.3:78613957-78613976 | None:intergenic | 45.0% |
| !! | GGCAAGACTGGTTTGAAACA+AGG | + | chr5.3:78613256-78613275 | MS.gene38214:CDS | 45.0% |
| !! | GGTCGTAAAGGTTCTGAACA+GGG | - | chr5.3:78614242-78614261 | None:intergenic | 45.0% |
| !! | GTGCTCATGGGATTTGTTGA+AGG | + | chr5.3:78614024-78614043 | MS.gene38214:CDS | 45.0% |
| !! | TGGTCGTAAAGGTTCTGAAC+AGG | - | chr5.3:78614243-78614262 | None:intergenic | 45.0% |
| AAGCTCACGGTTCCTTGCAA+AGG | - | chr5.3:78613800-78613819 | None:intergenic | 50.0% | |
| ACTCTTCACAGTACGACGCA+TGG | - | chr5.3:78613329-78613348 | None:intergenic | 50.0% | |
| AGAGAACGGACCCAAGTACT+TGG | - | chr5.3:78613695-78613714 | None:intergenic | 50.0% | |
| AGCAAGACCAAGAGGGTCAA+AGG | - | chr5.3:78614109-78614128 | None:intergenic | 50.0% | |
| AGCATATGCCCATGCGTTGT+TGG | - | chr5.3:78614283-78614302 | None:intergenic | 50.0% | |
| CCGTTCTTCTCAAGGATCTC+AGG | - | chr5.3:78613874-78613893 | None:intergenic | 50.0% | |
| CGGTTCCTTGCAAAGGTTTC+AGG | - | chr5.3:78613793-78613812 | None:intergenic | 50.0% | |
| CTCTGAGCATGGATCAGGTT+TGG | - | chr5.3:78613976-78613995 | None:intergenic | 50.0% | |
| CTGACCCTGAAACCTTTGCA+AGG | + | chr5.3:78613785-78613804 | MS.gene38214:CDS | 50.0% | |
| CTTCTCAAGGATCTCAGGGA+AGG | - | chr5.3:78613869-78613888 | None:intergenic | 50.0% | |
| GAGAACGGACCCAAGTACTT+GGG | - | chr5.3:78613694-78613713 | None:intergenic | 50.0% | |
| GATTATGGATGGGACACAGC+TGG | + | chr5.3:78613754-78613773 | MS.gene38214:CDS | 50.0% | |
| GCTACACAGGTTGTGCTCAT+GGG | + | chr5.3:78614012-78614031 | MS.gene38214:CDS | 50.0% | |
| GGTCAGCAACATGGTCGTAA+AGG | - | chr5.3:78614254-78614273 | None:intergenic | 50.0% | |
| GGTCATCAGCAAGACCAAGA+GGG | - | chr5.3:78614116-78614135 | None:intergenic | 50.0% | |
| GTGTCCCATCCATAATCACC+AGG | - | chr5.3:78613751-78613770 | None:intergenic | 50.0% | |
| GTTGAAGGCTACAGAGTTGG+TGG | + | chr5.3:78614039-78614058 | MS.gene38214:CDS | 50.0% | |
| TCAGCATTCACTGGCAAGAC+TGG | + | chr5.3:78613244-78613263 | MS.gene38214:CDS | 50.0% | |
| TCTTGCAATCTGGGCTACAC+AGG | + | chr5.3:78613999-78614018 | MS.gene38214:CDS | 50.0% | |
| ! | GAATGCTCTGAGCATGGATC+AGG | - | chr5.3:78613981-78614000 | None:intergenic | 50.0% |
| ! | GAGGGTGGCCTTGACTATTT+GGG | + | chr5.3:78613946-78613965 | MS.gene38214:CDS | 50.0% |
| ! | TGAGGGTGGCCTTGACTATT+TGG | + | chr5.3:78613945-78613964 | MS.gene38214:CDS | 50.0% |
| !! | AGAGTGCTCCTGAGAGCATT+TGG | + | chr5.3:78613344-78613363 | MS.gene38214:CDS | 50.0% |
| !! | ATGGGCTATGCTTGGTGCAT+TGG | + | chr5.3:78613837-78613856 | MS.gene38214:CDS | 50.0% |
| !! | TGGGCTATGCTTGGTGCATT+GGG | + | chr5.3:78613838-78613857 | MS.gene38214:CDS | 50.0% |
| ACGGACCCAAGTACTTGGGA+CGG | - | chr5.3:78613690-78613709 | None:intergenic | 55.0% | |
| AGGCACCACCAGGGTATAGT+GGG | - | chr5.3:78614089-78614108 | None:intergenic | 55.0% | |
| AGGGCCCTTGCCAGTAACAA+TGG | - | chr5.3:78614223-78614242 | None:intergenic | 55.0% | |
| CCTGACCGTCCCAAGTACTT+GGG | + | chr5.3:78613682-78613701 | MS.gene38214:CDS | 55.0% | |
| CGGTGAGGCTGTGTGGTTTA+AGG | + | chr5.3:78613903-78613922 | MS.gene38214:CDS | 55.0% | |
| CTAGACCCACTATACCCTGG+TGG | + | chr5.3:78614081-78614100 | MS.gene38214:CDS | 55.0% | |
| GCCACCCTCAGAGAAGATCT+GGG | - | chr5.3:78613935-78613954 | None:intergenic | 55.0% | |
| GGAACTCAAGAACGGCCGAT+TGG | + | chr5.3:78614164-78614183 | MS.gene38214:CDS | 55.0% | |
| GGACTAGACCCACTATACCC+TGG | + | chr5.3:78614078-78614097 | MS.gene38214:CDS | 55.0% | |
| GGCTACACAGGTTGTGCTCA+TGG | + | chr5.3:78614011-78614030 | MS.gene38214:CDS | 55.0% | |
| GGGTCATCAGCAAGACCAAG+AGG | - | chr5.3:78614117-78614136 | None:intergenic | 55.0% | |
| GGGTCTAGTCCTTCACCAAG+TGG | - | chr5.3:78614069-78614088 | None:intergenic | 55.0% | |
| GGTGCCCAGATCTTCTCTGA+GGG | + | chr5.3:78613928-78613947 | MS.gene38214:CDS | 55.0% | |
| TCCTGACCGTCCCAAGTACT+TGG | + | chr5.3:78613681-78613700 | MS.gene38214:CDS | 55.0% | |
| TGGTGCCCAGATCTTCTCTG+AGG | + | chr5.3:78613927-78613946 | MS.gene38214:CDS | 55.0% | |
| ! | AAGGCACCACCAGGGTATAG+TGG | - | chr5.3:78614090-78614109 | None:intergenic | 55.0% |
| ! | GAGGCTGTGTGGTTTAAGGC+TGG | + | chr5.3:78613907-78613926 | MS.gene38214:CDS | 55.0% |
| !! | AGAGTTGGTGGAGGACCACT+TGG | + | chr5.3:78614051-78614070 | MS.gene38214:CDS | 55.0% |
| !! | CACAGCAGATGGGCTATGCT+TGG | + | chr5.3:78613829-78613848 | MS.gene38214:CDS | 55.0% |
| !! | GAAGGCTACAGAGTTGGTGG+AGG | + | chr5.3:78614042-78614061 | MS.gene38214:CDS | 55.0% |
| ACCCTGTCGCCAACAACGCA+TGG | + | chr5.3:78614271-78614290 | MS.gene38214:CDS | 60.0% | |
| CCCAAGTACTTGGGACGGTC+AGG | - | chr5.3:78613685-78613704 | None:intergenic | 60.0% | |
| CCCATGCGTTGTTGGCGACA+GGG | - | chr5.3:78614275-78614294 | None:intergenic | 60.0% | |
| CCCTGTCGCCAACAACGCAT+GGG | + | chr5.3:78614272-78614291 | MS.gene38214:CDS | 60.0% | |
| GGCCACCCTCAGAGAAGATC+TGG | - | chr5.3:78613936-78613955 | None:intergenic | 60.0% | |
| GGTGGTGCCTTTGACCCTCT+TGG | + | chr5.3:78614099-78614118 | MS.gene38214:CDS | 60.0% | |
| TGGCGACAGGGTCAGCAACA+TGG | - | chr5.3:78614263-78614282 | None:intergenic | 60.0% | |
| ! | GCCCAGATCTTCTCTGAGGG+TGG | + | chr5.3:78613931-78613950 | MS.gene38214:CDS | 60.0% |
| ! | GGTGGAGGACCACTTGGTGA+AGG | + | chr5.3:78614057-78614076 | MS.gene38214:CDS | 60.0% |
| !! | AGAGGGTCAAAGGCACCACC+AGG | - | chr5.3:78614099-78614118 | None:intergenic | 60.0% |
| !! | GAGGGTCAAAGGCACCACCA+GGG | - | chr5.3:78614098-78614117 | None:intergenic | 60.0% |
| GCCCATGCGTTGTTGGCGAC+AGG | - | chr5.3:78614276-78614295 | None:intergenic | 65.0% | |
| GGGACGGTCAGGACCATACC+TGG | - | chr5.3:78613674-78613693 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 78613220 | 78614326 | 78613220 | ID=MS.gene38214 |
| chr5.3 | mRNA | 78613220 | 78614326 | 78613220 | ID=MS.gene38214.t1;Parent=MS.gene38214 |
| chr5.3 | exon | 78613220 | 78613365 | 78613220 | ID=MS.gene38214.t1.exon1;Parent=MS.gene38214.t1 |
| chr5.3 | CDS | 78613220 | 78613365 | 78613220 | ID=cds.MS.gene38214.t1;Parent=MS.gene38214.t1 |
| chr5.3 | exon | 78613675 | 78614326 | 78613675 | ID=MS.gene38214.t1.exon2;Parent=MS.gene38214.t1 |
| chr5.3 | CDS | 78613675 | 78614326 | 78613675 | ID=cds.MS.gene38214.t1;Parent=MS.gene38214.t1 |
| Gene Sequence |
| Protein sequence |
