Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36470.t1 | AAC25775.1 | 100 | 266 | 0 | 0 | 1 | 266 | 1 | 266 | 5.50E-151 | 543.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36470.t1 | P07371 | 97.0 | 265 | 8 | 0 | 2 | 266 | 5 | 269 | 7.5e-149 | 527.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36470.t1 | O81391 | 100.0 | 266 | 0 | 0 | 1 | 266 | 1 | 266 | 3.9e-151 | 543.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene36470 | 0.8705 | 1.39E-66 | -1.69E-46 |
| MS.gene049173 | MS.gene36470 | 0.860975 | 1.42E-63 | -1.69E-46 |
| MS.gene049217 | MS.gene36470 | 0.828551 | 8.44E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene36470 | 0.840162 | 1.03E-57 | -1.69E-46 |
| MS.gene049232 | MS.gene36470 | 0.827941 | 1.18E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene36470 | 0.874753 | 5.28E-68 | -1.69E-46 |
| MS.gene049320 | MS.gene36470 | 0.905304 | 4.94E-80 | -1.69E-46 |
| MS.gene049609 | MS.gene36470 | 0.813522 | 2.45E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene36470 | 0.847057 | 1.47E-59 | -1.69E-46 |
| MS.gene05010 | MS.gene36470 | 0.833166 | 6.23E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene36470 | 0.888323 | 6.54E-73 | -1.69E-46 |
| MS.gene050165 | MS.gene36470 | 0.887179 | 1.79E-72 | -1.69E-46 |
| MS.gene050216 | MS.gene36470 | 0.808132 | 3.60E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene36470 | 0.815959 | 7.08E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene36470 | 0.843432 | 1.41E-58 | -1.69E-46 |
| MS.gene050444 | MS.gene36470 | 0.803525 | 3.34E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene36470 | 0.890744 | 7.47E-74 | -1.69E-46 |
| MS.gene050518 | MS.gene36470 | 0.871739 | 5.43E-67 | -1.69E-46 |
| MS.gene050577 | MS.gene36470 | 0.8404 | 8.89E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene36470 | 0.909203 | 7.38E-82 | -1.69E-46 |
| MS.gene050675 | MS.gene36470 | 0.854445 | 1.22E-61 | -1.69E-46 |
| MS.gene050699 | MS.gene36470 | 0.864055 | 1.60E-64 | -1.69E-46 |
| MS.gene050772 | MS.gene36470 | 0.844267 | 8.40E-59 | -1.69E-46 |
| MS.gene05080 | MS.gene36470 | 0.826558 | 2.54E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene36470 | 0.820055 | 8.39E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene36470 | 0.818446 | 1.95E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene36470 | 0.898915 | 3.32E-77 | -1.69E-46 |
| MS.gene05100 | MS.gene36470 | 0.850884 | 1.27E-60 | -1.69E-46 |
| MS.gene051127 | MS.gene36470 | -0.822963 | 1.79E-53 | -1.69E-46 |
| MS.gene051138 | MS.gene36470 | -0.801634 | 8.21E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene36470 | 0.842043 | 3.29E-58 | -1.69E-46 |
| MS.gene051268 | MS.gene36470 | 0.806327 | 8.68E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene36470 | 0.829477 | 5.04E-55 | -1.69E-46 |
| MS.gene051509 | MS.gene36470 | 0.808677 | 2.75E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene36470 | 0.872023 | 4.37E-67 | -1.69E-46 |
| MS.gene051810 | MS.gene36470 | 0.917893 | 3.04E-86 | -1.69E-46 |
| MS.gene051949 | MS.gene36470 | 0.829993 | 3.77E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene36470 | 0.846747 | 1.79E-59 | -1.69E-46 |
| MS.gene052271 | MS.gene36470 | 0.836316 | 1.01E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene36470 | 0.802633 | 5.11E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene36470 | 0.801623 | 8.25E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene36470 | 0.815888 | 7.34E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene36470 | 0.809228 | 2.10E-50 | -1.69E-46 |
| MS.gene053009 | MS.gene36470 | 0.860545 | 1.92E-63 | -1.69E-46 |
| MS.gene053203 | MS.gene36470 | 0.821933 | 3.10E-53 | -1.69E-46 |
| MS.gene053207 | MS.gene36470 | 0.818901 | 1.54E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene36470 | 0.847558 | 1.07E-59 | -1.69E-46 |
| MS.gene053286 | MS.gene36470 | 0.852349 | 4.89E-61 | -1.69E-46 |
| MS.gene053420 | MS.gene36470 | -0.800375 | 1.48E-48 | -1.69E-46 |
| MS.gene053561 | MS.gene36470 | -0.80681 | 6.87E-50 | -1.69E-46 |
| MS.gene053574 | MS.gene36470 | 0.828445 | 8.96E-55 | -1.69E-46 |
| MS.gene053632 | MS.gene36470 | 0.846159 | 2.59E-59 | -1.69E-46 |
| MS.gene053916 | MS.gene36470 | 0.819337 | 1.22E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene36470 | 0.802396 | 5.72E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene36470 | 0.813919 | 2.01E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene36470 | 0.851836 | 6.84E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene36470 | 0.883739 | 3.48E-71 | -1.69E-46 |
| MS.gene05470 | MS.gene36470 | 0.855395 | 6.49E-62 | -1.69E-46 |
| MS.gene054954 | MS.gene36470 | 0.887119 | 1.89E-72 | -1.69E-46 |
| MS.gene055154 | MS.gene36470 | -0.803389 | 3.57E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene36470 | 0.804057 | 2.59E-49 | -1.69E-46 |
| MS.gene055212 | MS.gene36470 | 0.806439 | 8.22E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene36470 | 0.894794 | 1.76E-75 | -1.69E-46 |
| MS.gene055397 | MS.gene36470 | 0.806191 | 9.27E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene36470 | 0.811813 | 5.80E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene36470 | 0.858126 | 1.02E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene36470 | 0.818528 | 1.87E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene36470 | 0.851875 | 6.67E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene36470 | 0.846335 | 2.32E-59 | -1.69E-46 |
| MS.gene055750 | MS.gene36470 | 0.81725 | 3.63E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene36470 | 0.854126 | 1.51E-61 | -1.69E-46 |
| MS.gene055776 | MS.gene36470 | 0.893392 | 6.56E-75 | -1.69E-46 |
| MS.gene05589 | MS.gene36470 | 0.843137 | 1.69E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene36470 | 0.806375 | 8.48E-50 | -1.69E-46 |
| MS.gene055956 | MS.gene36470 | -0.806087 | 9.75E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene36470 | 0.821782 | 3.36E-53 | -1.69E-46 |
| MS.gene056374 | MS.gene36470 | 0.876115 | 1.80E-68 | -1.69E-46 |
| MS.gene056504 | MS.gene36470 | 0.867936 | 9.47E-66 | -1.69E-46 |
| MS.gene056510 | MS.gene36470 | 0.873795 | 1.11E-67 | -1.69E-46 |
| MS.gene056657 | MS.gene36470 | 0.884667 | 1.58E-71 | -1.69E-46 |
| MS.gene057129 | MS.gene36470 | 0.837269 | 5.74E-57 | -1.69E-46 |
| MS.gene057246 | MS.gene36470 | 0.852026 | 6.04E-61 | -1.69E-46 |
| MS.gene057331 | MS.gene36470 | 0.814781 | 1.29E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene36470 | 0.810458 | 1.14E-50 | -1.69E-46 |
| MS.gene05753 | MS.gene36470 | 0.818321 | 2.08E-52 | -1.69E-46 |
| MS.gene057805 | MS.gene36470 | 0.812581 | 3.94E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene36470 | 0.804169 | 2.46E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene36470 | 0.886151 | 4.39E-72 | -1.69E-46 |
| MS.gene058544 | MS.gene36470 | 0.840945 | 6.41E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene36470 | 0.893347 | 6.84E-75 | -1.69E-46 |
| MS.gene058773 | MS.gene36470 | 0.870174 | 1.78E-66 | -1.69E-46 |
| MS.gene059022 | MS.gene36470 | 0.911803 | 4.02E-83 | -1.69E-46 |
| MS.gene059023 | MS.gene36470 | 0.812771 | 3.58E-51 | -1.69E-46 |
| MS.gene059029 | MS.gene36470 | 0.819953 | 8.86E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene36470 | 0.84494 | 5.54E-59 | -1.69E-46 |
| MS.gene059677 | MS.gene36470 | 0.89302 | 9.26E-75 | -1.69E-46 |
| MS.gene059718 | MS.gene36470 | 0.851368 | 9.29E-61 | -1.69E-46 |
| MS.gene059756 | MS.gene36470 | 0.806972 | 6.34E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene36470 | 0.91028 | 2.24E-82 | -1.69E-46 |
| MS.gene060341 | MS.gene36470 | 0.853532 | 2.25E-61 | -1.69E-46 |
| MS.gene060703 | MS.gene36470 | 0.83505 | 2.10E-56 | -1.69E-46 |
| MS.gene060727 | MS.gene36470 | 0.8068 | 6.90E-50 | -1.69E-46 |
| MS.gene060728 | MS.gene36470 | 0.825047 | 5.80E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene36470 | 0.866441 | 2.85E-65 | -1.69E-46 |
| MS.gene060778 | MS.gene36470 | 0.810145 | 1.33E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene36470 | 0.847999 | 8.11E-60 | -1.69E-46 |
| MS.gene060982 | MS.gene36470 | 0.847434 | 1.16E-59 | -1.69E-46 |
| MS.gene061134 | MS.gene36470 | 0.810684 | 1.02E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene36470 | 0.844332 | 8.07E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20446 | MS.gene36470 | PPI |
| MS.gene36470 | MS.gene03545 | PPI |
| MS.gene36470 | MS.gene38214 | PPI |
| MS.gene36470 | MS.gene88379 | PPI |
| MS.gene36470 | MS.gene031355 | PPI |
| MS.gene36470 | MS.gene20445 | PPI |
| MS.gene36470 | MS.gene031016 | PPI |
| MS.gene36470 | MS.gene20446 | PPI |
| MS.gene36470 | MS.gene023132 | PPI |
| MS.gene36470 | MS.gene38046 | PPI |
| MS.gene36470 | MS.gene020883 | PPI |
| MS.gene36470 | MS.gene031028 | PPI |
| MS.gene36470 | MS.gene99767 | PPI |
| MS.gene36470 | MS.gene20443 | PPI |
| MS.gene36470 | MS.gene028321 | PPI |
| MS.gene36470 | MS.gene031030 | PPI |
| MS.gene36470 | MS.gene20444 | PPI |
| MS.gene36470 | MS.gene81230 | PPI |
| MS.gene36470 | MS.gene35137 | PPI |
| MS.gene36470 | MS.gene93362 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36470.t1 | MTR_4g094605 | 99.624 | 266 | 1 | 0 | 1 | 266 | 1 | 266 | 0.0 | 538 |
| MS.gene36470.t1 | MTR_6g012080 | 90.226 | 266 | 25 | 1 | 1 | 266 | 1 | 265 | 1.83e-177 | 489 |
| MS.gene36470.t1 | MTR_6g011870 | 90.977 | 266 | 23 | 1 | 1 | 266 | 1 | 265 | 7.70e-175 | 482 |
| MS.gene36470.t1 | MTR_6g011880 | 90.226 | 266 | 25 | 1 | 1 | 266 | 1 | 265 | 5.42e-174 | 480 |
| MS.gene36470.t1 | MTR_6g011890 | 90.226 | 266 | 25 | 1 | 1 | 266 | 1 | 265 | 6.25e-174 | 480 |
| MS.gene36470.t1 | MTR_6g012110 | 89.098 | 266 | 28 | 1 | 1 | 266 | 1 | 265 | 6.05e-172 | 475 |
| MS.gene36470.t1 | MTR_5g097280 | 82.500 | 240 | 38 | 1 | 27 | 266 | 30 | 265 | 3.03e-149 | 417 |
| MS.gene36470.t1 | MTR_6g043600 | 83.621 | 232 | 17 | 2 | 35 | 266 | 19 | 229 | 7.20e-137 | 385 |
| MS.gene36470.t1 | MTR_2g081090 | 73.444 | 241 | 51 | 3 | 27 | 265 | 34 | 263 | 6.53e-121 | 346 |
| MS.gene36470.t1 | MTR_2g081090 | 73.191 | 235 | 61 | 2 | 33 | 265 | 2 | 236 | 1.36e-120 | 344 |
| MS.gene36470.t1 | MTR_6g060175 | 50.847 | 236 | 101 | 6 | 29 | 254 | 44 | 274 | 6.95e-66 | 207 |
| MS.gene36470.t1 | MTR_1g026550 | 46.914 | 243 | 116 | 7 | 23 | 254 | 82 | 322 | 3.02e-60 | 194 |
| MS.gene36470.t1 | MTR_6g060175 | 49.153 | 236 | 95 | 7 | 29 | 254 | 44 | 264 | 2.06e-59 | 190 |
| MS.gene36470.t1 | MTR_5g098785 | 37.500 | 272 | 132 | 11 | 9 | 254 | 10 | 269 | 7.53e-38 | 134 |
| MS.gene36470.t1 | MTR_5g098780 | 35.231 | 281 | 130 | 11 | 6 | 254 | 7 | 267 | 2.83e-37 | 133 |
| MS.gene36470.t1 | MTR_6g033320 | 43.655 | 197 | 90 | 7 | 64 | 254 | 52 | 233 | 1.04e-36 | 130 |
| MS.gene36470.t1 | MTR_8g023790 | 37.607 | 234 | 105 | 10 | 34 | 250 | 47 | 256 | 1.53e-36 | 130 |
| MS.gene36470.t1 | MTR_3g101670 | 40.206 | 194 | 102 | 5 | 65 | 250 | 66 | 253 | 4.42e-35 | 127 |
| MS.gene36470.t1 | MTR_2g042720 | 36.726 | 226 | 107 | 9 | 53 | 261 | 60 | 266 | 3.11e-32 | 119 |
| MS.gene36470.t1 | MTR_3g435460 | 35.714 | 196 | 102 | 5 | 67 | 253 | 63 | 243 | 5.38e-30 | 113 |
| MS.gene36470.t1 | MTR_4g015570 | 43.827 | 162 | 76 | 6 | 94 | 254 | 134 | 281 | 8.79e-28 | 108 |
| MS.gene36470.t1 | MTR_1g026550 | 42.000 | 150 | 81 | 4 | 24 | 169 | 83 | 230 | 2.14e-27 | 106 |
| MS.gene36470.t1 | MTR_3g435460 | 34.392 | 189 | 100 | 5 | 74 | 253 | 9 | 182 | 2.52e-26 | 102 |
| MS.gene36470.t1 | MTR_3g070340 | 36.564 | 227 | 80 | 10 | 65 | 244 | 65 | 274 | 3.56e-21 | 90.5 |
| MS.gene36470.t1 | MTR_5g098770 | 55.405 | 74 | 32 | 1 | 182 | 254 | 13 | 86 | 3.76e-21 | 85.5 |
| MS.gene36470.t1 | MTR_2g008610 | 33.816 | 207 | 87 | 8 | 67 | 243 | 73 | 259 | 7.22e-18 | 81.3 |
| MS.gene36470.t1 | MTR_2g436960 | 50.685 | 73 | 29 | 2 | 181 | 253 | 27 | 92 | 7.81e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36470.t1 | AT2G34430 | 88.060 | 268 | 28 | 3 | 1 | 266 | 1 | 266 | 1.13e-170 | 472 |
| MS.gene36470.t1 | AT1G29930 | 87.687 | 268 | 30 | 3 | 1 | 266 | 1 | 267 | 1.12e-169 | 469 |
| MS.gene36470.t1 | AT1G29920 | 87.313 | 268 | 31 | 3 | 1 | 266 | 1 | 267 | 6.11e-169 | 468 |
| MS.gene36470.t1 | AT1G29910 | 87.313 | 268 | 31 | 3 | 1 | 266 | 1 | 267 | 6.11e-169 | 468 |
| MS.gene36470.t1 | AT2G34420 | 87.640 | 267 | 30 | 3 | 1 | 266 | 1 | 265 | 1.06e-167 | 464 |
| MS.gene36470.t1 | AT2G05070 | 77.206 | 272 | 49 | 4 | 1 | 266 | 1 | 265 | 2.60e-149 | 418 |
| MS.gene36470.t1 | AT3G27690 | 75.368 | 272 | 55 | 3 | 2 | 266 | 32 | 298 | 1.76e-148 | 417 |
| MS.gene36470.t1 | AT2G05100 | 76.471 | 272 | 51 | 4 | 1 | 266 | 1 | 265 | 1.96e-148 | 416 |
| MS.gene36470.t1 | AT3G27690 | 76.190 | 273 | 51 | 4 | 1 | 266 | 1 | 266 | 4.87e-148 | 415 |
| MS.gene36470.t1 | AT2G05100 | 75.000 | 244 | 48 | 4 | 1 | 238 | 1 | 237 | 4.31e-126 | 361 |
| MS.gene36470.t1 | AT5G54270 | 70.881 | 261 | 60 | 6 | 20 | 265 | 5 | 264 | 1.66e-120 | 345 |
| MS.gene36470.t1 | AT1G76570 | 48.416 | 221 | 104 | 5 | 44 | 254 | 100 | 320 | 9.31e-61 | 195 |
| MS.gene36470.t1 | AT4G10340 | 50.000 | 222 | 98 | 6 | 37 | 254 | 53 | 265 | 1.42e-60 | 193 |
| MS.gene36470.t1 | AT3G54890 | 45.178 | 197 | 87 | 7 | 64 | 254 | 51 | 232 | 2.70e-38 | 134 |
| MS.gene36470.t1 | AT1G45474 | 37.662 | 231 | 127 | 6 | 29 | 250 | 20 | 242 | 4.90e-38 | 134 |
| MS.gene36470.t1 | AT1G45474 | 37.662 | 231 | 127 | 6 | 29 | 250 | 20 | 242 | 4.90e-38 | 134 |
| MS.gene36470.t1 | AT1G61520 | 38.400 | 250 | 117 | 10 | 30 | 254 | 28 | 265 | 2.46e-37 | 133 |
| MS.gene36470.t1 | AT1G61520 | 38.400 | 250 | 117 | 10 | 30 | 254 | 28 | 265 | 2.46e-37 | 133 |
| MS.gene36470.t1 | AT3G61470 | 37.768 | 233 | 103 | 10 | 35 | 250 | 38 | 245 | 6.83e-37 | 131 |
| MS.gene36470.t1 | AT1G61520 | 39.614 | 207 | 90 | 9 | 74 | 255 | 15 | 211 | 1.46e-33 | 121 |
| MS.gene36470.t1 | AT1G19150 | 36.134 | 238 | 115 | 9 | 41 | 261 | 52 | 269 | 4.08e-32 | 119 |
| MS.gene36470.t1 | AT3G47470 | 40.838 | 191 | 99 | 7 | 67 | 253 | 64 | 244 | 4.03e-31 | 116 |
| MS.gene36470.t1 | AT3G08940 | 35.793 | 271 | 112 | 12 | 29 | 254 | 26 | 279 | 2.84e-29 | 112 |
| MS.gene36470.t1 | AT5G01530 | 43.210 | 162 | 77 | 6 | 94 | 254 | 135 | 282 | 2.18e-27 | 107 |
| MS.gene36470.t1 | AT3G54890 | 39.175 | 194 | 69 | 7 | 64 | 254 | 51 | 198 | 2.27e-25 | 100 |
| MS.gene36470.t1 | AT3G54890 | 41.615 | 161 | 74 | 6 | 64 | 219 | 51 | 196 | 3.47e-24 | 97.1 |
| MS.gene36470.t1 | AT2G40100 | 42.208 | 154 | 69 | 7 | 94 | 244 | 136 | 272 | 1.75e-22 | 94.0 |
| MS.gene36470.t1 | AT1G15820 | 34.300 | 207 | 86 | 7 | 67 | 243 | 70 | 256 | 6.25e-19 | 84.0 |
| MS.gene36470.t1 | AT5G28450 | 55.556 | 63 | 26 | 2 | 190 | 250 | 99 | 161 | 1.75e-13 | 67.4 |
| MS.gene36470.t1 | AT3G54890 | 43.820 | 89 | 41 | 3 | 64 | 150 | 51 | 132 | 9.63e-12 | 62.4 |
Find 124 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGTTCTTGGCGAATGTCTC+TGG | 0.172290 | 4.1:+18542944 | None:intergenic |
| CATAATGACCATTCACTTTC+CGG | 0.213438 | 4.1:+18542418 | None:intergenic |
| TCCTGAGGAGGCTACTTTCT+TGG | 0.215971 | 4.1:+18543090 | None:intergenic |
| ACCTTGCAGCTCCCAATTCT+TGG | 0.262027 | 4.1:+18543137 | None:intergenic |
| CTCAGAGCATTCTTGCCATC+TGG | 0.267634 | 4.1:-18542745 | MS.gene36470:CDS |
| GTGGGCTATGTTGGGAGCCT+TGG | 0.274776 | 4.1:-18542897 | MS.gene36470:CDS |
| GACTTCAAGTTCACGGTTCT+TGG | 0.287728 | 4.1:+18542931 | None:intergenic |
| CTCTGAGCATGGACCAAACT+TGG | 0.318566 | 4.1:+18542761 | None:intergenic |
| GTTCTCCAAAGGTCCCTTTC+CGG | 0.323199 | 4.1:+18542505 | None:intergenic |
| AACACCTTCAAGCCAAGAAT+TGG | 0.335617 | 4.1:-18543149 | MS.gene36470:CDS |
| TTCAACTCTGCGAAAGCCTC+TGG | 0.342564 | 4.1:+18542599 | None:intergenic |
| CCTAAGTACTTAACACGGTC+TGG | 0.354037 | 4.1:+18543052 | None:intergenic |
| GCTCCCAATTCTTGGCTTGA+AGG | 0.356558 | 4.1:+18543145 | None:intergenic |
| TGGGCTATGTTGGGAGCCTT+GGG | 0.369590 | 4.1:-18542896 | MS.gene36470:CDS |
| CTTGAAGGTGTTAGCTTGAC+TGG | 0.370284 | 4.1:+18543160 | None:intergenic |
| CTACTTGGGTAACCCAAGTT+TGG | 0.372382 | 4.1:-18542774 | MS.gene36470:CDS |
| GTCCACCCTCGCTAAAGATC+TGG | 0.379439 | 4.1:+18542801 | None:intergenic |
| GGAGGCAGCTTTGACCCATT+GGG | 0.385139 | 4.1:-18542635 | MS.gene36470:CDS |
| GCCCATGCGTTGTTGTTGAC+TGG | 0.388666 | 4.1:+18542461 | None:intergenic |
| TATGTTCGGATTCTTTGTTC+AGG | 0.392718 | 4.1:-18542537 | MS.gene36470:CDS |
| CGAGGGTGGACTTGACTACT+TGG | 0.394014 | 4.1:-18542789 | MS.gene36470:CDS |
| CCATAGCAGGTGGGCTATGT+TGG | 0.398243 | 4.1:-18542906 | MS.gene36470:CDS |
| TCTCGCAATGGTGTTAAATT+CGG | 0.399582 | 4.1:-18542851 | MS.gene36470:CDS |
| TATGCCACCAACTTTGTTCC+CGG | 0.408282 | 4.1:-18542437 | MS.gene36470:CDS |
| CTCTCTTCACCTACCTTGGC+TGG | 0.410368 | 4.1:-18543187 | MS.gene36470:CDS |
| GTTGAAGGTTACCGTATTGC+TGG | 0.411128 | 4.1:-18542695 | MS.gene36470:CDS |
| AGGAGGCAGCTTTGACCCAT+TGG | 0.412272 | 4.1:-18542636 | MS.gene36470:CDS |
| TTAGCCATGTTCTCTATGTT+CGG | 0.413048 | 4.1:-18542551 | MS.gene36470:CDS |
| ATAATGACCATTCACTTTCC+GGG | 0.417015 | 4.1:+18542419 | None:intergenic |
| TTTCGCAGAGTTGAAGGTTA+AGG | 0.417491 | 4.1:-18542591 | MS.gene36470:CDS |
| ACACGGTCTGGGCCGTACCA+TGG | 0.426815 | 4.1:+18543064 | None:intergenic |
| CAGGCTATTGTGACCGGAAA+GGG | 0.431695 | 4.1:-18542518 | MS.gene36470:CDS |
| CGTATTGCTGGTGGACCTCT+TGG | 0.432323 | 4.1:-18542683 | MS.gene36470:CDS |
| AATGGGTCAAAGCTGCCTCC+TGG | 0.443349 | 4.1:+18542638 | None:intergenic |
| GGCTCTCTCTTCACCTACCT+TGG | 0.445027 | 4.1:-18543191 | MS.gene36470:CDS |
| TGTGACCGGAAAGGGACCTT+TGG | 0.445095 | 4.1:-18542510 | MS.gene36470:CDS |
| GGCCACTCAAGTTATCTTGA+TGG | 0.448718 | 4.1:-18542723 | MS.gene36470:CDS |
| TCAGAGCATTCTTGCCATCT+GGG | 0.457297 | 4.1:-18542744 | MS.gene36470:CDS |
| CACGGTCTGGGCCGTACCAT+GGG | 0.459595 | 4.1:+18543065 | None:intergenic |
| TTAAATTCGGTGAGGCTGTA+TGG | 0.460132 | 4.1:-18542838 | MS.gene36470:CDS |
| CATAGCAGGTGGGCTATGTT+GGG | 0.463478 | 4.1:-18542905 | MS.gene36470:CDS |
| AGAGGCTTTCGCAGAGTTGA+AGG | 0.464620 | 4.1:-18542597 | MS.gene36470:CDS |
| CCCATGCGTTGTTGTTGACT+GGG | 0.468289 | 4.1:+18542462 | None:intergenic |
| ATCTTGATGGGAGCCGTTGA+AGG | 0.469661 | 4.1:-18542710 | MS.gene36470:CDS |
| CCAACATAGCCCACCTGCTA+TGG | 0.470589 | 4.1:+18542906 | None:intergenic |
| CCATTGCGAGACAAAAGCTC+TGG | 0.476957 | 4.1:+18542863 | None:intergenic |
| GTGTCCCATCCGTAGTCACC+TGG | 0.480375 | 4.1:+18542986 | None:intergenic |
| GGTCGTCAGCTAGGCCCAAT+GGG | 0.483278 | 4.1:+18542621 | None:intergenic |
| CGGTGAGGCTGTATGGTTCA+AGG | 0.483338 | 4.1:-18542831 | MS.gene36470:CDS |
| AAGCTGCCTCCTGGGTATAG+TGG | 0.484943 | 4.1:+18542647 | None:intergenic |
| AAGTACTTAGGCCCATTCTC+TGG | 0.486720 | 4.1:-18543040 | MS.gene36470:CDS |
| ACACCTTCAAGCCAAGAATT+GGG | 0.487359 | 4.1:-18543148 | MS.gene36470:CDS |
| TTTGTTCAGGCTATTGTGAC+CGG | 0.488454 | 4.1:-18542524 | MS.gene36470:CDS |
| AAGCCTCTGGGTCGTCAGCT+AGG | 0.492481 | 4.1:+18542612 | None:intergenic |
| GGGTCGTCAGCTAGGCCCAA+TGG | 0.492858 | 4.1:+18542620 | None:intergenic |
| AGCTGCCTCCTGGGTATAGT+GGG | 0.505096 | 4.1:+18542648 | None:intergenic |
| CCAGACCGTGTTAAGTACTT+AGG | 0.508216 | 4.1:-18543052 | MS.gene36470:CDS |
| TGAGGAGGCTACTTTCTTGG+TGG | 0.512202 | 4.1:+18543093 | None:intergenic |
| ATGGGTCAAAGCTGCCTCCT+GGG | 0.512483 | 4.1:+18542639 | None:intergenic |
| TCCACCCTCGCTAAAGATCT+GGG | 0.513274 | 4.1:+18542802 | None:intergenic |
| ACCCAGTCAACAACAACGCA+TGG | 0.514482 | 4.1:-18542463 | MS.gene36470:CDS |
| GGGAACAAAGTTGGTGGCAT+AGG | 0.515086 | 4.1:+18542439 | None:intergenic |
| TCACTTTCCGGGAACAAAGT+TGG | 0.517061 | 4.1:+18542430 | None:intergenic |
| ACTCTCCAGTCAAGTAAGAC+GGG | 0.525262 | 4.1:+18543011 | None:intergenic |
| GGTTCTTGGCGAATGTCTCT+GGG | 0.525535 | 4.1:+18542945 | None:intergenic |
| TATGGATGACTTCAAGTTCA+CGG | 0.526961 | 4.1:+18542924 | None:intergenic |
| CTCGCTAAAGATCTGGGATC+CGG | 0.527239 | 4.1:+18542808 | None:intergenic |
| GTACCATGGGCTTCCTGAGG+AGG | 0.529428 | 4.1:+18543078 | None:intergenic |
| TCCTCAGGAAGCCCATGGTA+CGG | 0.534699 | 4.1:-18543076 | MS.gene36470:CDS |
| CTTTCCGGGAACAAAGTTGG+TGG | 0.536757 | 4.1:+18542433 | None:intergenic |
| TCCCAGATCTTTAGCGAGGG+TGG | 0.536796 | 4.1:-18542803 | MS.gene36470:CDS |
| ACCAAGAAAGTAGCCTCCTC+AGG | 0.538963 | 4.1:-18543091 | MS.gene36470:CDS |
| CTTGACTGGCTTGCCAGCCA+AGG | 0.543981 | 4.1:+18543174 | None:intergenic |
| TGCGTTGTTGTTGACTGGGT+CGG | 0.549416 | 4.1:+18542466 | None:intergenic |
| GCCACTCAAGTTATCTTGAT+GGG | 0.551888 | 4.1:-18542722 | MS.gene36470:CDS |
| TCAACTCTGCGAAAGCCTCT+GGG | 0.551997 | 4.1:+18542600 | None:intergenic |
| GGAGAGTTCCCAGGTGACTA+CGG | 0.554538 | 4.1:-18542995 | MS.gene36470:CDS |
| CAAGAGGTCCACCAGCAATA+CGG | 0.554867 | 4.1:+18542684 | None:intergenic |
| AACAATGGCCGCATCATCCA+TGG | 0.557317 | 4.1:-18543212 | None:intergenic |
| TACTTGACTGGAGAGTTCCC+AGG | 0.557425 | 4.1:-18543004 | MS.gene36470:CDS |
| CTCTGGGAAAACACATCCCA+AGG | 0.558618 | 4.1:+18542880 | None:intergenic |
| AACTTGAAGTCATCCATAGC+AGG | 0.560347 | 4.1:-18542919 | MS.gene36470:CDS |
| TGGCAAGAATGCTCTGAGCA+TGG | 0.562020 | 4.1:+18542750 | None:intergenic |
| AGTTCCCAGGTGACTACGGA+TGG | 0.562952 | 4.1:-18542991 | MS.gene36470:CDS |
| AACTCTCCAGTCAAGTAAGA+CGG | 0.563156 | 4.1:+18543010 | None:intergenic |
| GACTACGGATGGGACACTGC+TGG | 0.567506 | 4.1:-18542980 | MS.gene36470:CDS |
| AGCAATACGGTAACCTTCAA+CGG | 0.570535 | 4.1:+18542697 | None:intergenic |
| GAAGGTTACCGTATTGCTGG+TGG | 0.574077 | 4.1:-18542692 | MS.gene36470:CDS |
| CTAAGTACTTAACACGGTCT+GGG | 0.575188 | 4.1:+18543053 | None:intergenic |
| GATAACTTGAGTGGCCCAGA+TGG | 0.578481 | 4.1:+18542730 | None:intergenic |
| TCAGGCTATTGTGACCGGAA+AGG | 0.579894 | 4.1:-18542519 | MS.gene36470:CDS |
| TGCTGGTGGACCTCTTGGTG+AGG | 0.581508 | 4.1:-18542678 | MS.gene36470:CDS |
| ACTGGCTTGCCAGCCAAGGT+AGG | 0.586629 | 4.1:+18543178 | None:intergenic |
| GGTAGGTGAAGAGAGAGCCA+TGG | 0.594297 | 4.1:+18543195 | None:intergenic |
| TCTGAGCATGGACCAAACTT+GGG | 0.597282 | 4.1:+18542762 | None:intergenic |
| CTCTCCAGTCAAGTAAGACG+GGG | 0.600570 | 4.1:+18543012 | None:intergenic |
| TTGAAGTCATCCATAGCAGG+TGG | 0.604782 | 4.1:-18542916 | MS.gene36470:CDS |
| GGTGGTAGCAGACTTCCTCA+TGG | 0.606241 | 4.1:+18543111 | None:intergenic |
| GCCGTACCATGGGCTTCCTG+AGG | 0.606264 | 4.1:+18543075 | None:intergenic |
| GAATCCGAACATAGAGAACA+TGG | 0.607900 | 4.1:+18542547 | None:intergenic |
| GAGGCTGTATGGTTCAAGGC+CGG | 0.609667 | 4.1:-18542827 | MS.gene36470:CDS |
| TCCCATCAAGATAACTTGAG+TGG | 0.611094 | 4.1:+18542721 | None:intergenic |
| CCCAGTCAACAACAACGCAT+GGG | 0.613068 | 4.1:-18542462 | MS.gene36470:CDS |
| CATTGCGAGACAAAAGCTCT+GGG | 0.627524 | 4.1:+18542864 | None:intergenic |
| TGTCCCATCCGTAGTCACCT+GGG | 0.637071 | 4.1:+18542987 | None:intergenic |
| CGGATCCCAGATCTTTAGCG+AGG | 0.637974 | 4.1:-18542807 | MS.gene36470:CDS |
| GCCAAGAATTGGGAGCTGCA+AGG | 0.640361 | 4.1:-18543138 | MS.gene36470:CDS |
| AGAGAGAGCCATGGATGATG+CGG | 0.641541 | 4.1:+18543204 | None:intergenic |
| AAGGTTAAGGAACTCAAGAA+CGG | 0.647483 | 4.1:-18542578 | MS.gene36470:CDS |
| TAGCCTCCTCAGGAAGCCCA+TGG | 0.650998 | 4.1:-18543081 | MS.gene36470:CDS |
| GGATCCCAGATCTTTAGCGA+GGG | 0.652580 | 4.1:-18542806 | MS.gene36470:CDS |
| GTTCCCAGGTGACTACGGAT+GGG | 0.662262 | 4.1:-18542990 | MS.gene36470:CDS |
| TGATCAGCAAGGTTCTCCAA+AGG | 0.663337 | 4.1:+18542494 | None:intergenic |
| TGAAGTCATCCATAGCAGGT+GGG | 0.676313 | 4.1:-18542915 | MS.gene36470:CDS |
| GAGGGTGGACTTGACTACTT+GGG | 0.679046 | 4.1:-18542788 | MS.gene36470:CDS |
| GGGTCAACAACCTCACCAAG+AGG | 0.680083 | 4.1:+18542668 | None:intergenic |
| GAGCTGCAAGGTTCACCATG+AGG | 0.681403 | 4.1:-18543126 | MS.gene36470:CDS |
| GGGCCTAGCTGACGACCCAG+AGG | 0.694133 | 4.1:-18542615 | MS.gene36470:CDS |
| GTTGTTGACCCACTATACCC+AGG | 0.698071 | 4.1:-18542656 | MS.gene36470:CDS |
| CAATGGTGTTAAATTCGGTG+AGG | 0.700535 | 4.1:-18542846 | MS.gene36470:CDS |
| GGTCGGCAAGATGATCAGCA+AGG | 0.704980 | 4.1:+18542483 | None:intergenic |
| TCTCCAGTCAAGTAAGACGG+GGG | 0.735891 | 4.1:+18543013 | None:intergenic |
| ATGGGCCTAAGTACTTAACA+CGG | 0.752177 | 4.1:+18543047 | None:intergenic |
| GTTGACCCACTATACCCAGG+AGG | 0.784900 | 4.1:-18542653 | MS.gene36470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAGGTTAAGGAACTCAAGAA+CGG | - | chr4.1:18543060-18543079 | MS.gene36470:CDS | 35.0% | |
| TATGTTCGGATTCTTTGTTC+AGG | - | chr4.1:18543101-18543120 | MS.gene36470:CDS | 35.0% | |
| TTAGCCATGTTCTCTATGTT+CGG | - | chr4.1:18543087-18543106 | MS.gene36470:CDS | 35.0% | |
| ! | TATGGATGACTTCAAGTTCA+CGG | + | chr4.1:18542717-18542736 | None:intergenic | 35.0% |
| ! | TCTCGCAATGGTGTTAAATT+CGG | - | chr4.1:18542787-18542806 | MS.gene36470:CDS | 35.0% |
| AACACCTTCAAGCCAAGAAT+TGG | - | chr4.1:18542489-18542508 | MS.gene36470:CDS | 40.0% | |
| AACTCTCCAGTCAAGTAAGA+CGG | + | chr4.1:18542631-18542650 | None:intergenic | 40.0% | |
| AACTTGAAGTCATCCATAGC+AGG | - | chr4.1:18542719-18542738 | MS.gene36470:CDS | 40.0% | |
| ACACCTTCAAGCCAAGAATT+GGG | - | chr4.1:18542490-18542509 | MS.gene36470:CDS | 40.0% | |
| AGCAATACGGTAACCTTCAA+CGG | + | chr4.1:18542944-18542963 | None:intergenic | 40.0% | |
| ATGGGCCTAAGTACTTAACA+CGG | + | chr4.1:18542594-18542613 | None:intergenic | 40.0% | |
| CTAAGTACTTAACACGGTCT+GGG | + | chr4.1:18542588-18542607 | None:intergenic | 40.0% | |
| GAATCCGAACATAGAGAACA+TGG | + | chr4.1:18543094-18543113 | None:intergenic | 40.0% | |
| GCCACTCAAGTTATCTTGAT+GGG | - | chr4.1:18542916-18542935 | MS.gene36470:CDS | 40.0% | |
| TCCCATCAAGATAACTTGAG+TGG | + | chr4.1:18542920-18542939 | None:intergenic | 40.0% | |
| TTTCGCAGAGTTGAAGGTTA+AGG | - | chr4.1:18543047-18543066 | MS.gene36470:CDS | 40.0% | |
| TTTGTTCAGGCTATTGTGAC+CGG | - | chr4.1:18543114-18543133 | MS.gene36470:CDS | 40.0% | |
| ! | CAATGGTGTTAAATTCGGTG+AGG | - | chr4.1:18542792-18542811 | MS.gene36470:CDS | 40.0% |
| ! | TTAAATTCGGTGAGGCTGTA+TGG | - | chr4.1:18542800-18542819 | MS.gene36470:CDS | 40.0% |
| AAGTACTTAGGCCCATTCTC+TGG | - | chr4.1:18542598-18542617 | MS.gene36470:CDS | 45.0% | |
| ACTCTCCAGTCAAGTAAGAC+GGG | + | chr4.1:18542630-18542649 | None:intergenic | 45.0% | |
| CATTGCGAGACAAAAGCTCT+GGG | + | chr4.1:18542777-18542796 | None:intergenic | 45.0% | |
| CCAGACCGTGTTAAGTACTT+AGG | - | chr4.1:18542586-18542605 | MS.gene36470:CDS | 45.0% | |
| CCTAAGTACTTAACACGGTC+TGG | + | chr4.1:18542589-18542608 | None:intergenic | 45.0% | |
| CTACTTGGGTAACCCAAGTT+TGG | - | chr4.1:18542864-18542883 | MS.gene36470:CDS | 45.0% | |
| GGCCACTCAAGTTATCTTGA+TGG | - | chr4.1:18542915-18542934 | MS.gene36470:CDS | 45.0% | |
| GTTGAAGGTTACCGTATTGC+TGG | - | chr4.1:18542943-18542962 | MS.gene36470:CDS | 45.0% | |
| TATGCCACCAACTTTGTTCC+CGG | - | chr4.1:18543201-18543220 | MS.gene36470:CDS | 45.0% | |
| TCACTTTCCGGGAACAAAGT+TGG | + | chr4.1:18543211-18543230 | None:intergenic | 45.0% | |
| TCTGAGCATGGACCAAACTT+GGG | + | chr4.1:18542879-18542898 | None:intergenic | 45.0% | |
| TGAAGTCATCCATAGCAGGT+GGG | - | chr4.1:18542723-18542742 | MS.gene36470:CDS | 45.0% | |
| TGATCAGCAAGGTTCTCCAA+AGG | + | chr4.1:18543147-18543166 | None:intergenic | 45.0% | |
| TTGAAGTCATCCATAGCAGG+TGG | - | chr4.1:18542722-18542741 | MS.gene36470:CDS | 45.0% | |
| ! | GACTTCAAGTTCACGGTTCT+TGG | + | chr4.1:18542710-18542729 | None:intergenic | 45.0% |
| ! | TCAGAGCATTCTTGCCATCT+GGG | - | chr4.1:18542894-18542913 | MS.gene36470:CDS | 45.0% |
| !! | CTTGAAGGTGTTAGCTTGAC+TGG | + | chr4.1:18542481-18542500 | None:intergenic | 45.0% |
| ACCAAGAAAGTAGCCTCCTC+AGG | - | chr4.1:18542547-18542566 | MS.gene36470:CDS | 50.0% | |
| ACCCAGTCAACAACAACGCA+TGG | - | chr4.1:18543175-18543194 | MS.gene36470:CDS | 50.0% | |
| ACCTTGCAGCTCCCAATTCT+TGG | + | chr4.1:18542504-18542523 | None:intergenic | 50.0% | |
| AGAGAGAGCCATGGATGATG+CGG | + | chr4.1:18542437-18542456 | None:intergenic | 50.0% | |
| AGAGGCTTTCGCAGAGTTGA+AGG | - | chr4.1:18543041-18543060 | MS.gene36470:CDS | 50.0% | |
| ATCTTGATGGGAGCCGTTGA+AGG | - | chr4.1:18542928-18542947 | MS.gene36470:CDS | 50.0% | |
| CAAGAGGTCCACCAGCAATA+CGG | + | chr4.1:18542957-18542976 | None:intergenic | 50.0% | |
| CAGGCTATTGTGACCGGAAA+GGG | - | chr4.1:18543120-18543139 | MS.gene36470:CDS | 50.0% | |
| CCATTGCGAGACAAAAGCTC+TGG | + | chr4.1:18542778-18542797 | None:intergenic | 50.0% | |
| CCCAGTCAACAACAACGCAT+GGG | - | chr4.1:18543176-18543195 | MS.gene36470:CDS | 50.0% | |
| CTCTCCAGTCAAGTAAGACG+GGG | + | chr4.1:18542629-18542648 | None:intergenic | 50.0% | |
| CTCTGAGCATGGACCAAACT+TGG | + | chr4.1:18542880-18542899 | None:intergenic | 50.0% | |
| CTTTCCGGGAACAAAGTTGG+TGG | + | chr4.1:18543208-18543227 | None:intergenic | 50.0% | |
| GAAGGTTACCGTATTGCTGG+TGG | - | chr4.1:18542946-18542965 | MS.gene36470:CDS | 50.0% | |
| GATAACTTGAGTGGCCCAGA+TGG | + | chr4.1:18542911-18542930 | None:intergenic | 50.0% | |
| GGATCCCAGATCTTTAGCGA+GGG | - | chr4.1:18542832-18542851 | MS.gene36470:CDS | 50.0% | |
| GGTTCTTGGCGAATGTCTCT+GGG | + | chr4.1:18542696-18542715 | None:intergenic | 50.0% | |
| GTTCTCCAAAGGTCCCTTTC+CGG | + | chr4.1:18543136-18543155 | None:intergenic | 50.0% | |
| GTTGTTGACCCACTATACCC+AGG | - | chr4.1:18542982-18543001 | MS.gene36470:CDS | 50.0% | |
| TACTTGACTGGAGAGTTCCC+AGG | - | chr4.1:18542634-18542653 | MS.gene36470:CDS | 50.0% | |
| TCAACTCTGCGAAAGCCTCT+GGG | + | chr4.1:18543041-18543060 | None:intergenic | 50.0% | |
| TCAGGCTATTGTGACCGGAA+AGG | - | chr4.1:18543119-18543138 | MS.gene36470:CDS | 50.0% | |
| TCCACCCTCGCTAAAGATCT+GGG | + | chr4.1:18542839-18542858 | None:intergenic | 50.0% | |
| TCTCCAGTCAAGTAAGACGG+GGG | + | chr4.1:18542628-18542647 | None:intergenic | 50.0% | |
| TTCAACTCTGCGAAAGCCTC+TGG | + | chr4.1:18543042-18543061 | None:intergenic | 50.0% | |
| ! | CCAGAGCTTTTGTCTCGCAA+TGG | - | chr4.1:18542775-18542794 | MS.gene36470:CDS | 50.0% |
| ! | CCCATGCGTTGTTGTTGACT+GGG | + | chr4.1:18543179-18543198 | None:intergenic | 50.0% |
| ! | CTCAGAGCATTCTTGCCATC+TGG | - | chr4.1:18542893-18542912 | MS.gene36470:CDS | 50.0% |
| ! | CTCGCTAAAGATCTGGGATC+CGG | + | chr4.1:18542833-18542852 | None:intergenic | 50.0% |
| ! | CTCTGGGAAAACACATCCCA+AGG | + | chr4.1:18542761-18542780 | None:intergenic | 50.0% |
| ! | GAGGGTGGACTTGACTACTT+GGG | - | chr4.1:18542850-18542869 | MS.gene36470:CDS | 50.0% |
| ! | GCTCCCAATTCTTGGCTTGA+AGG | + | chr4.1:18542496-18542515 | None:intergenic | 50.0% |
| ! | TCCTGAGGAGGCTACTTTCT+TGG | + | chr4.1:18542551-18542570 | None:intergenic | 50.0% |
| ! | TGAGGAGGCTACTTTCTTGG+TGG | + | chr4.1:18542548-18542567 | None:intergenic | 50.0% |
| ! | TGCGTTGTTGTTGACTGGGT+CGG | + | chr4.1:18543175-18543194 | None:intergenic | 50.0% |
| ! | TGGCAAGAATGCTCTGAGCA+TGG | + | chr4.1:18542891-18542910 | None:intergenic | 50.0% |
| !! | CATAGCAGGTGGGCTATGTT+GGG | - | chr4.1:18542733-18542752 | MS.gene36470:CDS | 50.0% |
| !! | GGGAACAAAGTTGGTGGCAT+AGG | + | chr4.1:18543202-18543221 | None:intergenic | 50.0% |
| AAGCTGCCTCCTGGGTATAG+TGG | + | chr4.1:18542994-18543013 | None:intergenic | 55.0% | |
| AATGGGTCAAAGCTGCCTCC+TGG | + | chr4.1:18543003-18543022 | None:intergenic | 55.0% | |
| AGCTGCCTCCTGGGTATAGT+GGG | + | chr4.1:18542993-18543012 | None:intergenic | 55.0% | |
| AGTTCCCAGGTGACTACGGA+TGG | - | chr4.1:18542647-18542666 | MS.gene36470:CDS | 55.0% | |
| ATGGGTCAAAGCTGCCTCCT+GGG | + | chr4.1:18543002-18543021 | None:intergenic | 55.0% | |
| CCAACATAGCCCACCTGCTA+TGG | + | chr4.1:18542735-18542754 | None:intergenic | 55.0% | |
| CGGATCCCAGATCTTTAGCG+AGG | - | chr4.1:18542831-18542850 | MS.gene36470:CDS | 55.0% | |
| CGGTGAGGCTGTATGGTTCA+AGG | - | chr4.1:18542807-18542826 | MS.gene36470:CDS | 55.0% | |
| CGGTTCTTGGCGAATGTCTC+TGG | + | chr4.1:18542697-18542716 | None:intergenic | 55.0% | |
| CTCTCTTCACCTACCTTGGC+TGG | - | chr4.1:18542451-18542470 | MS.gene36470:CDS | 55.0% | |
| GAGCTGCAAGGTTCACCATG+AGG | - | chr4.1:18542512-18542531 | MS.gene36470:CDS | 55.0% | |
| GAGGCTGTATGGTTCAAGGC+CGG | - | chr4.1:18542811-18542830 | MS.gene36470:CDS | 55.0% | |
| GCCAAGAATTGGGAGCTGCA+AGG | - | chr4.1:18542500-18542519 | MS.gene36470:CDS | 55.0% | |
| GGAGAGTTCCCAGGTGACTA+CGG | - | chr4.1:18542643-18542662 | MS.gene36470:CDS | 55.0% | |
| GGCTCTCTCTTCACCTACCT+TGG | - | chr4.1:18542447-18542466 | MS.gene36470:CDS | 55.0% | |
| GGGTCAACAACCTCACCAAG+AGG | + | chr4.1:18542973-18542992 | None:intergenic | 55.0% | |
| GGTAGGTGAAGAGAGAGCCA+TGG | + | chr4.1:18542446-18542465 | None:intergenic | 55.0% | |
| GGTCGGCAAGATGATCAGCA+AGG | + | chr4.1:18543158-18543177 | None:intergenic | 55.0% | |
| GGTGGTAGCAGACTTCCTCA+TGG | + | chr4.1:18542530-18542549 | None:intergenic | 55.0% | |
| GTCCACCCTCGCTAAAGATC+TGG | + | chr4.1:18542840-18542859 | None:intergenic | 55.0% | |
| GTTCCCAGGTGACTACGGAT+GGG | - | chr4.1:18542648-18542667 | MS.gene36470:CDS | 55.0% | |
| GTTGACCCACTATACCCAGG+AGG | - | chr4.1:18542985-18543004 | MS.gene36470:CDS | 55.0% | |
| TCCCAGATCTTTAGCGAGGG+TGG | - | chr4.1:18542835-18542854 | MS.gene36470:CDS | 55.0% | |
| TCCTCAGGAAGCCCATGGTA+CGG | - | chr4.1:18542562-18542581 | MS.gene36470:CDS | 55.0% | |
| TGGGCTATGTTGGGAGCCTT+GGG | - | chr4.1:18542742-18542761 | MS.gene36470:CDS | 55.0% | |
| TGTCCCATCCGTAGTCACCT+GGG | + | chr4.1:18542654-18542673 | None:intergenic | 55.0% | |
| TGTGACCGGAAAGGGACCTT+TGG | - | chr4.1:18543128-18543147 | MS.gene36470:CDS | 55.0% | |
| ! | AGGAGGCAGCTTTGACCCAT+TGG | - | chr4.1:18543002-18543021 | MS.gene36470:CDS | 55.0% |
| ! | CGAGGGTGGACTTGACTACT+TGG | - | chr4.1:18542849-18542868 | MS.gene36470:CDS | 55.0% |
| ! | CGTATTGCTGGTGGACCTCT+TGG | - | chr4.1:18542955-18542974 | MS.gene36470:CDS | 55.0% |
| ! | GCCCATGCGTTGTTGTTGAC+TGG | + | chr4.1:18543180-18543199 | None:intergenic | 55.0% |
| ! | GGAGGCAGCTTTGACCCATT+GGG | - | chr4.1:18543003-18543022 | MS.gene36470:CDS | 55.0% |
| !! | CCATAGCAGGTGGGCTATGT+TGG | - | chr4.1:18542732-18542751 | MS.gene36470:CDS | 55.0% |
| AAGCCTCTGGGTCGTCAGCT+AGG | + | chr4.1:18543029-18543048 | None:intergenic | 60.0% | |
| ACGGGGGCTCACCAGAGAAT+GGG | + | chr4.1:18542612-18542631 | None:intergenic | 60.0% | |
| GACTACGGATGGGACACTGC+TGG | - | chr4.1:18542658-18542677 | MS.gene36470:CDS | 60.0% | |
| GAGCCCCCGTCTTACTTGAC+TGG | - | chr4.1:18542622-18542641 | MS.gene36470:CDS | 60.0% | |
| GGTCGTCAGCTAGGCCCAAT+GGG | + | chr4.1:18543020-18543039 | None:intergenic | 60.0% | |
| GTACCATGGGCTTCCTGAGG+AGG | + | chr4.1:18542563-18542582 | None:intergenic | 60.0% | |
| GTGTCCCATCCGTAGTCACC+TGG | + | chr4.1:18542655-18542674 | None:intergenic | 60.0% | |
| TAGCCTCCTCAGGAAGCCCA+TGG | - | chr4.1:18542557-18542576 | MS.gene36470:CDS | 60.0% | |
| ! | GTGGGCTATGTTGGGAGCCT+TGG | - | chr4.1:18542741-18542760 | MS.gene36470:CDS | 60.0% |
| ! | TGCTGGTGGACCTCTTGGTG+AGG | - | chr4.1:18542960-18542979 | MS.gene36470:CDS | 60.0% |
| !! | ACTGGCTTGCCAGCCAAGGT+AGG | + | chr4.1:18542463-18542482 | None:intergenic | 60.0% |
| !! | CTTGACTGGCTTGCCAGCCA+AGG | + | chr4.1:18542467-18542486 | None:intergenic | 60.0% |
| ACACGGTCTGGGCCGTACCA+TGG | + | chr4.1:18542577-18542596 | None:intergenic | 65.0% | |
| CACGGTCTGGGCCGTACCAT+GGG | + | chr4.1:18542576-18542595 | None:intergenic | 65.0% | |
| GACGGGGGCTCACCAGAGAA+TGG | + | chr4.1:18542613-18542632 | None:intergenic | 65.0% | |
| GCCGTACCATGGGCTTCCTG+AGG | + | chr4.1:18542566-18542585 | None:intergenic | 65.0% | |
| GGGTCGTCAGCTAGGCCCAA+TGG | + | chr4.1:18543021-18543040 | None:intergenic | 65.0% | |
| GGGCCTAGCTGACGACCCAG+AGG | - | chr4.1:18543023-18543042 | MS.gene36470:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 18542430 | 18543230 | 18542430 | ID=MS.gene36470 |
| chr4.1 | mRNA | 18542430 | 18543230 | 18542430 | ID=MS.gene36470.t1;Parent=MS.gene36470 |
| chr4.1 | exon | 18542430 | 18543230 | 18542430 | ID=MS.gene36470.t1.exon1;Parent=MS.gene36470.t1 |
| chr4.1 | CDS | 18542430 | 18543230 | 18542430 | ID=cds.MS.gene36470.t1;Parent=MS.gene36470.t1 |
| Gene Sequence |
| Protein sequence |
