Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20444.t1 | RHN50045.1 | 98.5 | 265 | 4 | 0 | 1 | 265 | 268 | 532 | 2.50E-148 | 534.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20444.t1 | P07369 | 92.1 | 267 | 19 | 2 | 1 | 265 | 1 | 267 | 1.8e-142 | 506.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20444.t1 | G7KKG9 | 98.5 | 265 | 4 | 0 | 1 | 265 | 1 | 265 | 1.8e-148 | 534.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene20444 | 0.821847 | 3.25E-53 | -1.69E-46 |
| MS.gene049173 | MS.gene20444 | 0.838387 | 2.96E-57 | -1.69E-46 |
| MS.gene049217 | MS.gene20444 | 0.843193 | 1.63E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene20444 | 0.815085 | 1.11E-51 | -1.69E-46 |
| MS.gene049232 | MS.gene20444 | 0.828496 | 8.71E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene20444 | 0.890497 | 9.34E-74 | -1.69E-46 |
| MS.gene049320 | MS.gene20444 | 0.908355 | 1.87E-81 | -1.69E-46 |
| MS.gene049600 | MS.gene20444 | 0.822371 | 2.46E-53 | -1.69E-46 |
| MS.gene049609 | MS.gene20444 | 0.80716 | 5.79E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene20444 | 0.809414 | 1.91E-50 | -1.69E-46 |
| MS.gene049828 | MS.gene20444 | 0.824514 | 7.74E-54 | -1.69E-46 |
| MS.gene049907 | MS.gene20444 | 0.800609 | 1.33E-48 | -1.69E-46 |
| MS.gene05010 | MS.gene20444 | 0.857746 | 1.32E-62 | -1.69E-46 |
| MS.gene050163 | MS.gene20444 | 0.879171 | 1.55E-69 | -1.69E-46 |
| MS.gene050165 | MS.gene20444 | 0.867008 | 1.88E-65 | -1.69E-46 |
| MS.gene050216 | MS.gene20444 | 0.81877 | 1.65E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene20444 | 0.870822 | 1.09E-66 | -1.69E-46 |
| MS.gene050432 | MS.gene20444 | 0.814746 | 1.32E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene20444 | 0.863634 | 2.16E-64 | -1.69E-46 |
| MS.gene050518 | MS.gene20444 | 0.876837 | 1.02E-68 | -1.69E-46 |
| MS.gene050520 | MS.gene20444 | 0.825962 | 3.52E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene20444 | 0.877949 | 4.17E-69 | -1.69E-46 |
| MS.gene050662 | MS.gene20444 | 0.823736 | 1.18E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene20444 | 0.847356 | 1.22E-59 | -1.69E-46 |
| MS.gene050686 | MS.gene20444 | 0.843755 | 1.15E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene20444 | 0.851362 | 9.33E-61 | -1.69E-46 |
| MS.gene050767 | MS.gene20444 | 0.880771 | 4.17E-70 | -1.69E-46 |
| MS.gene050770 | MS.gene20444 | 0.877957 | 4.14E-69 | -1.69E-46 |
| MS.gene050772 | MS.gene20444 | 0.865338 | 6.35E-65 | -1.69E-46 |
| MS.gene050876 | MS.gene20444 | 0.802001 | 6.90E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene20444 | 0.893044 | 9.06E-75 | -1.69E-46 |
| MS.gene05100 | MS.gene20444 | 0.847866 | 8.82E-60 | -1.69E-46 |
| MS.gene051228 | MS.gene20444 | 0.8687 | 5.37E-66 | -1.69E-46 |
| MS.gene051509 | MS.gene20444 | 0.828183 | 1.04E-54 | -1.69E-46 |
| MS.gene051551 | MS.gene20444 | 0.866432 | 2.86E-65 | -1.69E-46 |
| MS.gene051692 | MS.gene20444 | 0.813229 | 2.85E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene20444 | 0.893287 | 7.24E-75 | -1.69E-46 |
| MS.gene051858 | MS.gene20444 | 0.802777 | 4.78E-49 | -1.69E-46 |
| MS.gene051949 | MS.gene20444 | 0.830557 | 2.75E-55 | -1.69E-46 |
| MS.gene052271 | MS.gene20444 | 0.916529 | 1.60E-85 | -1.69E-46 |
| MS.gene052290 | MS.gene20444 | 0.807416 | 5.11E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene20444 | 0.816009 | 6.90E-52 | -1.69E-46 |
| MS.gene052615 | MS.gene20444 | 0.807577 | 4.72E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene20444 | 0.802855 | 4.60E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene20444 | 0.851476 | 8.66E-61 | -1.69E-46 |
| MS.gene053009 | MS.gene20444 | 0.855185 | 7.48E-62 | -1.69E-46 |
| MS.gene053018 | MS.gene20444 | 0.823798 | 1.14E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene20444 | 0.824165 | 9.36E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene20444 | 0.837872 | 4.02E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene20444 | 0.870732 | 1.17E-66 | -1.69E-46 |
| MS.gene053286 | MS.gene20444 | 0.872514 | 3.00E-67 | -1.69E-46 |
| MS.gene053322 | MS.gene20444 | 0.842835 | 2.03E-58 | -1.69E-46 |
| MS.gene053384 | MS.gene20444 | 0.800938 | 1.14E-48 | -1.69E-46 |
| MS.gene053574 | MS.gene20444 | 0.822534 | 2.25E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene20444 | 0.834216 | 3.41E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene20444 | 0.834432 | 3.01E-56 | -1.69E-46 |
| MS.gene053916 | MS.gene20444 | 0.849968 | 2.30E-60 | -1.69E-46 |
| MS.gene054376 | MS.gene20444 | 0.85142 | 8.98E-61 | -1.69E-46 |
| MS.gene054595 | MS.gene20444 | 0.815651 | 8.29E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene20444 | 0.84738 | 1.20E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene20444 | 0.899349 | 2.16E-77 | -1.69E-46 |
| MS.gene054804 | MS.gene20444 | 0.80495 | 1.69E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene20444 | 0.877628 | 5.39E-69 | -1.69E-46 |
| MS.gene05505 | MS.gene20444 | 0.814129 | 1.80E-51 | -1.69E-46 |
| MS.gene055212 | MS.gene20444 | 0.816116 | 6.53E-52 | -1.69E-46 |
| MS.gene055254 | MS.gene20444 | 0.825049 | 5.79E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene20444 | 0.886834 | 2.42E-72 | -1.69E-46 |
| MS.gene055397 | MS.gene20444 | 0.873373 | 1.55E-67 | -1.69E-46 |
| MS.gene055499 | MS.gene20444 | 0.847695 | 9.83E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene20444 | 0.830865 | 2.31E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene20444 | 0.801893 | 7.26E-49 | -1.69E-46 |
| MS.gene055634 | MS.gene20444 | 0.832989 | 6.90E-56 | -1.69E-46 |
| MS.gene055636 | MS.gene20444 | 0.869621 | 2.70E-66 | -1.69E-46 |
| MS.gene055638 | MS.gene20444 | 0.868844 | 4.83E-66 | -1.69E-46 |
| MS.gene055647 | MS.gene20444 | 0.858038 | 1.08E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene20444 | 0.879565 | 1.12E-69 | -1.69E-46 |
| MS.gene055750 | MS.gene20444 | 0.803204 | 3.90E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene20444 | 0.809947 | 1.47E-50 | -1.69E-46 |
| MS.gene055776 | MS.gene20444 | 0.856179 | 3.83E-62 | -1.69E-46 |
| MS.gene05592 | MS.gene20444 | 0.874542 | 6.22E-68 | -1.69E-46 |
| MS.gene055941 | MS.gene20444 | 0.804136 | 2.50E-49 | -1.69E-46 |
| MS.gene055956 | MS.gene20444 | -0.80268 | 5.00E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene20444 | 0.810523 | 1.10E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene20444 | 0.904123 | 1.71E-79 | -1.69E-46 |
| MS.gene056504 | MS.gene20444 | 0.825888 | 3.67E-54 | -1.69E-46 |
| MS.gene056510 | MS.gene20444 | 0.85088 | 1.28E-60 | -1.69E-46 |
| MS.gene056549 | MS.gene20444 | 0.801175 | 1.02E-48 | -1.69E-46 |
| MS.gene056657 | MS.gene20444 | 0.898907 | 3.35E-77 | -1.69E-46 |
| MS.gene057129 | MS.gene20444 | 0.881384 | 2.51E-70 | -1.69E-46 |
| MS.gene057331 | MS.gene20444 | 0.850195 | 1.99E-60 | -1.69E-46 |
| MS.gene057416 | MS.gene20444 | 0.853646 | 2.08E-61 | -1.69E-46 |
| MS.gene057926 | MS.gene20444 | 0.841321 | 5.10E-58 | -1.69E-46 |
| MS.gene058019 | MS.gene20444 | 0.809051 | 2.29E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene20444 | 0.81492 | 1.20E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene20444 | 0.881525 | 2.23E-70 | -1.69E-46 |
| MS.gene058459 | MS.gene20444 | 0.835392 | 1.72E-56 | -1.69E-46 |
| MS.gene058723 | MS.gene20444 | 0.858394 | 8.49E-63 | -1.69E-46 |
| MS.gene058773 | MS.gene20444 | 0.856346 | 3.42E-62 | -1.69E-46 |
| MS.gene058903 | MS.gene20444 | 0.840189 | 1.01E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene20444 | 0.886166 | 4.33E-72 | -1.69E-46 |
| MS.gene059029 | MS.gene20444 | 0.838345 | 3.04E-57 | -1.69E-46 |
| MS.gene05913 | MS.gene20444 | 0.832872 | 7.38E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene20444 | 0.826373 | 2.81E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene20444 | 0.869586 | 2.77E-66 | -1.69E-46 |
| MS.gene059711 | MS.gene20444 | 0.821657 | 3.59E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene20444 | 0.851004 | 1.18E-60 | -1.69E-46 |
| MS.gene059858 | MS.gene20444 | 0.802717 | 4.92E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene20444 | 0.854891 | 9.10E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene20444 | 0.8315 | 1.61E-55 | -1.69E-46 |
| MS.gene060193 | MS.gene20444 | 0.824072 | 9.84E-54 | -1.69E-46 |
| MS.gene060337 | MS.gene20444 | -0.807856 | 4.12E-50 | -1.69E-46 |
| MS.gene060341 | MS.gene20444 | 0.81275 | 3.62E-51 | -1.69E-46 |
| MS.gene060356 | MS.gene20444 | 0.86693 | 1.99E-65 | -1.69E-46 |
| MS.gene060482 | MS.gene20444 | 0.834639 | 2.67E-56 | -1.69E-46 |
| MS.gene060703 | MS.gene20444 | 0.829505 | 4.96E-55 | -1.69E-46 |
| MS.gene060727 | MS.gene20444 | 0.805356 | 1.39E-49 | -1.69E-46 |
| MS.gene060728 | MS.gene20444 | 0.817608 | 3.02E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene20444 | 0.807602 | 4.66E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene20444 | 0.810801 | 9.62E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene20444 | 0.82417 | 9.33E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene20444 | 0.817292 | 3.56E-52 | -1.69E-46 |
| MS.gene061134 | MS.gene20444 | 0.841583 | 4.35E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene20444 | 0.838595 | 2.62E-57 | -1.69E-46 |
| MS.gene061171 | MS.gene20444 | 0.813333 | 2.70E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene20444 | 0.875564 | 2.79E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023132 | MS.gene20444 | PPI |
| MS.gene20444 | MS.gene023132 | PPI |
| MS.gene38214 | MS.gene20444 | PPI |
| MS.gene20444 | MS.gene031355 | PPI |
| MS.gene20444 | MS.gene020883 | PPI |
| MS.gene20444 | MS.gene031028 | PPI |
| MS.gene20444 | MS.gene20445 | PPI |
| MS.gene99767 | MS.gene20444 | PPI |
| MS.gene031028 | MS.gene20444 | PPI |
| MS.gene20444 | MS.gene20443 | PPI |
| MS.gene20444 | MS.gene028321 | PPI |
| MS.gene20444 | MS.gene031030 | PPI |
| MS.gene20446 | MS.gene20444 | PPI |
| MS.gene20444 | MS.gene81230 | PPI |
| MS.gene20444 | MS.gene38046 | PPI |
| MS.gene81230 | MS.gene20444 | PPI |
| MS.gene38046 | MS.gene20444 | PPI |
| MS.gene20444 | MS.gene03545 | PPI |
| MS.gene20444 | MS.gene35137 | PPI |
| MS.gene20444 | MS.gene93362 | PPI |
| MS.gene20444 | MS.gene38214 | PPI |
| MS.gene20444 | MS.gene88379 | PPI |
| MS.gene36470 | MS.gene20444 | PPI |
| MS.gene031016 | MS.gene20444 | PPI |
| MS.gene20444 | MS.gene031016 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20444.t1 | MTR_6g012080 | 98.491 | 265 | 4 | 0 | 1 | 265 | 1 | 265 | 0.0 | 531 |
| MS.gene20444.t1 | MTR_6g012110 | 96.226 | 265 | 10 | 0 | 1 | 265 | 1 | 265 | 0.0 | 521 |
| MS.gene20444.t1 | MTR_6g011890 | 95.472 | 265 | 12 | 0 | 1 | 265 | 1 | 265 | 0.0 | 511 |
| MS.gene20444.t1 | MTR_6g011880 | 93.962 | 265 | 16 | 0 | 1 | 265 | 1 | 265 | 0.0 | 499 |
| MS.gene20444.t1 | MTR_6g011870 | 93.962 | 265 | 16 | 0 | 1 | 265 | 1 | 265 | 0.0 | 499 |
| MS.gene20444.t1 | MTR_4g094605 | 91.353 | 266 | 22 | 1 | 1 | 265 | 1 | 266 | 1.31e-179 | 494 |
| MS.gene20444.t1 | MTR_5g097280 | 76.119 | 268 | 58 | 3 | 1 | 265 | 1 | 265 | 2.42e-149 | 418 |
| MS.gene20444.t1 | MTR_6g043600 | 78.868 | 265 | 20 | 3 | 1 | 265 | 1 | 229 | 2.06e-140 | 394 |
| MS.gene20444.t1 | MTR_2g081090 | 78.899 | 218 | 44 | 2 | 49 | 264 | 19 | 236 | 4.36e-120 | 343 |
| MS.gene20444.t1 | MTR_2g081090 | 78.899 | 218 | 44 | 2 | 49 | 264 | 46 | 263 | 6.68e-120 | 343 |
| MS.gene20444.t1 | MTR_6g060175 | 53.110 | 209 | 89 | 4 | 49 | 253 | 71 | 274 | 1.01e-64 | 204 |
| MS.gene20444.t1 | MTR_1g026550 | 51.389 | 216 | 94 | 6 | 49 | 253 | 107 | 322 | 6.92e-62 | 198 |
| MS.gene20444.t1 | MTR_6g060175 | 51.196 | 209 | 83 | 5 | 49 | 253 | 71 | 264 | 4.29e-58 | 186 |
| MS.gene20444.t1 | MTR_5g098785 | 36.559 | 279 | 141 | 10 | 1 | 253 | 1 | 269 | 1.40e-37 | 134 |
| MS.gene20444.t1 | MTR_6g033320 | 43.005 | 193 | 90 | 6 | 66 | 253 | 56 | 233 | 3.22e-36 | 129 |
| MS.gene20444.t1 | MTR_5g098780 | 35.842 | 279 | 141 | 11 | 1 | 253 | 1 | 267 | 4.78e-36 | 129 |
| MS.gene20444.t1 | MTR_8g023790 | 34.496 | 258 | 123 | 11 | 9 | 249 | 28 | 256 | 4.84e-35 | 127 |
| MS.gene20444.t1 | MTR_3g101670 | 37.438 | 203 | 95 | 6 | 64 | 249 | 66 | 253 | 2.93e-33 | 122 |
| MS.gene20444.t1 | MTR_2g042720 | 35.841 | 226 | 109 | 9 | 52 | 260 | 60 | 266 | 6.30e-31 | 116 |
| MS.gene20444.t1 | MTR_3g435460 | 35.025 | 197 | 104 | 5 | 65 | 252 | 62 | 243 | 7.99e-30 | 112 |
| MS.gene20444.t1 | MTR_1g026550 | 47.619 | 126 | 62 | 3 | 47 | 168 | 105 | 230 | 1.01e-28 | 109 |
| MS.gene20444.t1 | MTR_4g015570 | 36.325 | 234 | 91 | 9 | 64 | 253 | 62 | 281 | 8.23e-28 | 108 |
| MS.gene20444.t1 | MTR_3g435460 | 33.862 | 189 | 101 | 5 | 73 | 252 | 9 | 182 | 4.79e-26 | 101 |
| MS.gene20444.t1 | MTR_3g070340 | 44.516 | 155 | 65 | 8 | 93 | 243 | 137 | 274 | 5.30e-21 | 90.1 |
| MS.gene20444.t1 | MTR_5g098770 | 54.054 | 74 | 33 | 1 | 181 | 253 | 13 | 86 | 6.05e-21 | 85.1 |
| MS.gene20444.t1 | MTR_2g008610 | 33.333 | 207 | 88 | 8 | 66 | 242 | 73 | 259 | 2.26e-17 | 79.7 |
| MS.gene20444.t1 | MTR_2g436960 | 49.315 | 73 | 30 | 2 | 180 | 252 | 27 | 92 | 1.47e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20444.t1 | AT1G29930 | 88.015 | 267 | 30 | 2 | 1 | 265 | 1 | 267 | 3.79e-172 | 476 |
| MS.gene20444.t1 | AT1G29920 | 87.640 | 267 | 31 | 2 | 1 | 265 | 1 | 267 | 2.52e-171 | 473 |
| MS.gene20444.t1 | AT1G29910 | 87.640 | 267 | 31 | 2 | 1 | 265 | 1 | 267 | 2.52e-171 | 473 |
| MS.gene20444.t1 | AT2G34430 | 88.015 | 267 | 29 | 3 | 1 | 265 | 1 | 266 | 1.19e-169 | 469 |
| MS.gene20444.t1 | AT2G34420 | 88.015 | 267 | 28 | 3 | 1 | 265 | 1 | 265 | 1.77e-169 | 469 |
| MS.gene20444.t1 | AT3G27690 | 78.229 | 271 | 48 | 4 | 2 | 265 | 32 | 298 | 3.22e-152 | 426 |
| MS.gene20444.t1 | AT3G27690 | 78.676 | 272 | 45 | 5 | 1 | 265 | 1 | 266 | 9.18e-152 | 424 |
| MS.gene20444.t1 | AT2G05070 | 77.985 | 268 | 53 | 3 | 1 | 265 | 1 | 265 | 1.01e-150 | 421 |
| MS.gene20444.t1 | AT2G05100 | 77.491 | 271 | 49 | 5 | 1 | 265 | 1 | 265 | 1.60e-149 | 418 |
| MS.gene20444.t1 | AT2G05100 | 76.955 | 243 | 44 | 5 | 1 | 237 | 1 | 237 | 4.48e-128 | 366 |
| MS.gene20444.t1 | AT5G54270 | 69.288 | 267 | 66 | 7 | 10 | 264 | 2 | 264 | 9.11e-120 | 343 |
| MS.gene20444.t1 | AT1G76570 | 47.162 | 229 | 111 | 5 | 35 | 253 | 92 | 320 | 2.11e-62 | 199 |
| MS.gene20444.t1 | AT4G10340 | 51.185 | 211 | 94 | 4 | 47 | 253 | 60 | 265 | 1.86e-60 | 192 |
| MS.gene20444.t1 | AT3G54890 | 44.041 | 193 | 88 | 6 | 66 | 253 | 55 | 232 | 2.10e-37 | 132 |
| MS.gene20444.t1 | AT1G61520 | 40.553 | 217 | 94 | 9 | 62 | 253 | 59 | 265 | 9.01e-37 | 131 |
| MS.gene20444.t1 | AT1G61520 | 40.553 | 217 | 94 | 9 | 62 | 253 | 59 | 265 | 9.01e-37 | 131 |
| MS.gene20444.t1 | AT1G45474 | 37.885 | 227 | 124 | 6 | 32 | 249 | 24 | 242 | 7.48e-36 | 129 |
| MS.gene20444.t1 | AT1G45474 | 37.885 | 227 | 124 | 6 | 32 | 249 | 24 | 242 | 7.48e-36 | 129 |
| MS.gene20444.t1 | AT3G61470 | 38.140 | 215 | 97 | 9 | 52 | 249 | 50 | 245 | 6.42e-35 | 126 |
| MS.gene20444.t1 | AT1G61520 | 39.130 | 207 | 91 | 9 | 73 | 254 | 15 | 211 | 1.74e-33 | 121 |
| MS.gene20444.t1 | AT3G47470 | 40.104 | 192 | 101 | 7 | 65 | 252 | 63 | 244 | 5.86e-31 | 115 |
| MS.gene20444.t1 | AT1G19150 | 35.398 | 226 | 110 | 8 | 52 | 260 | 63 | 269 | 2.94e-30 | 114 |
| MS.gene20444.t1 | AT3G08940 | 35.769 | 260 | 105 | 12 | 39 | 253 | 37 | 279 | 5.82e-28 | 108 |
| MS.gene20444.t1 | AT5G01530 | 37.339 | 233 | 88 | 10 | 65 | 253 | 64 | 282 | 2.26e-27 | 107 |
| MS.gene20444.t1 | AT3G54890 | 38.220 | 191 | 68 | 6 | 66 | 253 | 55 | 198 | 8.42e-24 | 95.9 |
| MS.gene20444.t1 | AT3G54890 | 40.764 | 157 | 74 | 5 | 66 | 218 | 55 | 196 | 1.40e-23 | 95.5 |
| MS.gene20444.t1 | AT2G40100 | 42.208 | 154 | 69 | 7 | 93 | 243 | 136 | 272 | 1.10e-22 | 94.4 |
| MS.gene20444.t1 | AT1G15820 | 33.816 | 207 | 87 | 7 | 66 | 242 | 70 | 256 | 2.07e-18 | 82.4 |
| MS.gene20444.t1 | AT5G28450 | 53.968 | 63 | 27 | 2 | 189 | 249 | 99 | 161 | 4.16e-13 | 66.2 |
| MS.gene20444.t1 | AT3G54890 | 42.353 | 85 | 41 | 2 | 66 | 149 | 55 | 132 | 3.81e-11 | 60.5 |
Find 110 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAAGCATCCTTGCAATT+TGG | 0.136116 | 6.3:+6555925 | MS.gene20444:CDS |
| GGCTTGCCAAGTTATCTTAA+TGG | 0.266805 | 6.3:+6555947 | MS.gene20444:CDS |
| TTAGCTATGTTCTCTATGTT+TGG | 0.272123 | 6.3:+6556119 | MS.gene20444:CDS |
| GTTCTCTAGAGGTCCCTTTC+CGG | 0.294770 | 6.3:-6556165 | None:intergenic |
| ATGGGCTATGTTGGGTGCCT+TGG | 0.311551 | 6.3:+6555773 | MS.gene20444:CDS |
| ACAAAGCATCCTTGCAATTT+GGG | 0.331163 | 6.3:+6555926 | MS.gene20444:CDS |
| TCCAGAAGGAACGTTCTTCT+TGG | 0.344142 | 6.3:-6555580 | None:intergenic |
| TCGAGGTCATCCACAGTAGA+TGG | 0.351194 | 6.3:+6555754 | MS.gene20444:CDS |
| TCTCGCAATGGTGTCAAATT+CGG | 0.351371 | 6.3:+6555819 | MS.gene20444:CDS |
| GACTATGGTTGGGACACTGC+TGG | 0.354408 | 6.3:+6555690 | MS.gene20444:CDS |
| AAGTACTTGGGCCCATTCTC+TGG | 0.361014 | 6.3:+6555630 | MS.gene20444:CDS |
| GGTGAATTTCCTGGTGACTA+TGG | 0.363361 | 6.3:+6555675 | MS.gene20444:CDS |
| TACCTCACTGGTGAATTTCC+TGG | 0.369528 | 6.3:+6555666 | MS.gene20444:CDS |
| TTCGTTCAGGCCATTGTAAC+CGG | 0.370708 | 6.3:+6556146 | MS.gene20444:CDS |
| GCTTGCCAAGTTATCTTAAT+GGG | 0.373943 | 6.3:+6555948 | MS.gene20444:CDS |
| CTTTGTGCATGGACTAGGCT+TGG | 0.381822 | 6.3:-6555909 | None:intergenic |
| CTCTCTTCTTCAACAATGGT+TGG | 0.383826 | 6.3:+6555486 | MS.gene20444:CDS |
| TGGGCTATGTTGGGTGCCTT+GGG | 0.394640 | 6.3:+6555774 | MS.gene20444:CDS |
| ATTCTTCCCATGCCAAGGTC+TGG | 0.397640 | 6.3:-6555537 | None:intergenic |
| ACCAAGAAGAACGTTCCTTC+TGG | 0.405063 | 6.3:+6555579 | MS.gene20444:CDS |
| CCCAAGTACTTGACACGGTC+TGG | 0.410224 | 6.3:-6555618 | None:intergenic |
| GCCCATGCGTTGTTGTTGAC+GGG | 0.412241 | 6.3:-6556209 | None:intergenic |
| TCCAGACCGTGTCAAGTACT+TGG | 0.414229 | 6.3:+6555617 | MS.gene20444:CDS |
| TGTTGACGGGGTCAGCAATA+TGG | 0.416907 | 6.3:-6556196 | None:intergenic |
| GGCCCATGCGTTGTTGTTGA+CGG | 0.418462 | 6.3:-6556210 | None:intergenic |
| GGATGCTTTGTGCATGGACT+AGG | 0.419278 | 6.3:-6555914 | None:intergenic |
| GTTGAGGGTTACCGTATTGC+TGG | 0.430208 | 6.3:+6555975 | MS.gene20444:CDS |
| CGTATTGCTGGTGGACCTCT+TGG | 0.432323 | 6.3:+6555987 | MS.gene20444:CDS |
| TGAAGGAGGACTTGACTACT+TGG | 0.434727 | 6.3:+6555881 | MS.gene20444:CDS |
| CAGCTCCCATTAAGATAACT+TGG | 0.434949 | 6.3:-6555953 | None:intergenic |
| TTCAACTCTGCAAAAGCCTC+TGG | 0.438072 | 6.3:-6556071 | None:intergenic |
| TTTGTGCATGGACTAGGCTT+GGG | 0.444324 | 6.3:-6555908 | None:intergenic |
| TCTCTTCTTCAACAATGGTT+GGG | 0.445775 | 6.3:+6555487 | MS.gene20444:CDS |
| CTTTCCGGGGACAAAGTTTG+TGG | 0.447832 | 6.3:-6556237 | None:intergenic |
| CACAGTAGATGGGCTATGTT+GGG | 0.449424 | 6.3:+6555765 | MS.gene20444:CDS |
| GGGTGGAAGCTTTGACCCAT+TGG | 0.450353 | 6.3:+6556034 | MS.gene20444:CDS |
| GGCTCTCTCTTCTTCAACAA+TGG | 0.456801 | 6.3:+6555482 | MS.gene20444:CDS |
| GGTGGAAGCTTTGACCCATT+GGG | 0.457466 | 6.3:+6556035 | MS.gene20444:CDS |
| CGGCGAGGCTGTGTGGTTCA+AGG | 0.463771 | 6.3:+6555839 | MS.gene20444:CDS |
| CCACAGTAGATGGGCTATGT+TGG | 0.471821 | 6.3:+6555764 | MS.gene20444:CDS |
| GATCATCAGCGAGGCCCAAT+GGG | 0.474717 | 6.3:-6556049 | None:intergenic |
| TGTGGATGACCTCGAGTTCA+CGG | 0.476627 | 6.3:-6555746 | None:intergenic |
| TATCTTAATGGGAGCTGTTG+AGG | 0.477252 | 6.3:+6555959 | MS.gene20444:CDS |
| ATCTTAATGGGAGCTGTTGA+GGG | 0.480343 | 6.3:+6555960 | MS.gene20444:CDS |
| CAGGCCATTGTAACCGGAAA+GGG | 0.483589 | 6.3:+6556152 | MS.gene20444:CDS |
| CACGGTCTGGACCGTACCAC+GGG | 0.486076 | 6.3:-6555605 | None:intergenic |
| AATTCACCAGTGAGGTAAGA+TGG | 0.486152 | 6.3:-6555660 | None:intergenic |
| ACTATGGTTGGGACACTGCT+GGG | 0.487785 | 6.3:+6555691 | MS.gene20444:CDS |
| ACCCCGTCAACAACAACGCA+TGG | 0.492539 | 6.3:+6556207 | MS.gene20444:CDS |
| GATGGAGCTTCACCAGAGAA+TGG | 0.493907 | 6.3:-6555642 | None:intergenic |
| TTCTTCAACAATGGTTGGGA+AGG | 0.494108 | 6.3:+6555491 | MS.gene20444:CDS |
| CCATTGCGAGATAAGAGCTC+AGG | 0.496373 | 6.3:-6555807 | None:intergenic |
| AATTTCCTGGTGACTATGGT+TGG | 0.506431 | 6.3:+6555679 | MS.gene20444:CDS |
| AGCTTCCACCCGGGTAGAGT+GGG | 0.507050 | 6.3:-6556022 | None:intergenic |
| ATGGAGCTTCACCAGAGAAT+GGG | 0.513997 | 6.3:-6555641 | None:intergenic |
| GAGGCTGTGTGGTTCAAGGC+AGG | 0.515376 | 6.3:+6555843 | MS.gene20444:CDS |
| AGAAGGAACGTTCTTCTTGG+TGG | 0.518277 | 6.3:-6555577 | None:intergenic |
| GGTAGTCGACCCACTCTACC+CGG | 0.521175 | 6.3:+6556013 | MS.gene20444:CDS |
| GGATCATCAGCGAGGCCCAA+TGG | 0.522174 | 6.3:-6556050 | None:intergenic |
| TTTGCCACAAACTTTGTCCC+CGG | 0.531351 | 6.3:+6556233 | MS.gene20444:CDS |
| TGGTGATTCTTCCCATGCCA+AGG | 0.534305 | 6.3:-6555542 | None:intergenic |
| AAGCTTCCACCCGGGTAGAG+TGG | 0.534876 | 6.3:-6556023 | None:intergenic |
| GGGGACAAAGTTTGTGGCAA+AGG | 0.536377 | 6.3:-6556231 | None:intergenic |
| TCTCCCTCTACTCCAGACCT+TGG | 0.540217 | 6.3:+6555525 | MS.gene20444:CDS |
| CCTTCTGGAAGCCCGTGGTA+CGG | 0.545378 | 6.3:+6555594 | MS.gene20444:CDS |
| ACACGGTCTGGACCGTACCA+CGG | 0.551715 | 6.3:-6555606 | None:intergenic |
| CATGCCAAGGTCTGGAGTAG+AGG | 0.552117 | 6.3:-6555529 | None:intergenic |
| CAAGAGGTCCACCAGCAATA+CGG | 0.554867 | 6.3:-6555986 | None:intergenic |
| GAAGCTCCATCTTACCTCAC+TGG | 0.557671 | 6.3:+6555654 | MS.gene20444:CDS |
| TGAAAGAACTCAAGAATGGT+AGG | 0.559512 | 6.3:+6556096 | MS.gene20444:CDS |
| CGAGGTCATCCACAGTAGAT+GGG | 0.559618 | 6.3:+6555755 | MS.gene20444:CDS |
| ATGCCAAGGTCTGGAGTAGA+GGG | 0.562060 | 6.3:-6555528 | None:intergenic |
| CCCATGCGTTGTTGTTGACG+GGG | 0.565011 | 6.3:-6556208 | None:intergenic |
| ATTTCCTGGTGACTATGGTT+GGG | 0.565504 | 6.3:+6555680 | MS.gene20444:CDS |
| AGGTCCCTTTCCGGTTACAA+TGG | 0.574200 | 6.3:-6556156 | None:intergenic |
| CCTGAGCTCTTATCTCGCAA+TGG | 0.578069 | 6.3:+6555807 | MS.gene20444:CDS |
| TTGCAAGGATGCTTTGTGCA+TGG | 0.581102 | 6.3:-6555920 | None:intergenic |
| CCAGACCGTGTCAAGTACTT+GGG | 0.581879 | 6.3:+6555618 | MS.gene20444:CDS |
| AAGGTGAAAGAACTCAAGAA+TGG | 0.584740 | 6.3:+6556092 | MS.gene20444:CDS |
| CTCTACTCCAGACCTTGGCA+TGG | 0.586599 | 6.3:+6555530 | MS.gene20444:CDS |
| TCAAATTCGGCGAGGCTGTG+TGG | 0.588909 | 6.3:+6555832 | MS.gene20444:CDS |
| CTTGGCAAGCCCAAATTGCA+AGG | 0.589228 | 6.3:-6555935 | None:intergenic |
| TCTCAAATCTTTAGTGAAGG+AGG | 0.596227 | 6.3:+6555867 | MS.gene20444:CDS |
| AATGGGTCAAAGCTTCCACC+CGG | 0.596844 | 6.3:-6556032 | None:intergenic |
| CCCCGTCAACAACAACGCAT+GGG | 0.596948 | 6.3:+6556208 | MS.gene20444:CDS |
| TCAGGCCATTGTAACCGGAA+AGG | 0.602000 | 6.3:+6556151 | MS.gene20444:CDS |
| TCTACTCCAGACCTTGGCAT+GGG | 0.609820 | 6.3:+6555531 | MS.gene20444:CDS |
| TGCTGGTGGACCTCTTGGTG+AGG | 0.612383 | 6.3:+6555992 | MS.gene20444:CDS |
| GTGTCCCAACCATAGTCACC+AGG | 0.616804 | 6.3:-6555684 | None:intergenic |
| CCGTACCACGGGCTTCCAGA+AGG | 0.618214 | 6.3:-6555594 | None:intergenic |
| GAGGGTTACCGTATTGCTGG+TGG | 0.619713 | 6.3:+6555978 | MS.gene20444:CDS |
| GGGCCTCGCTGATGATCCAG+AGG | 0.624243 | 6.3:+6556055 | MS.gene20444:CDS |
| TACAATGGCTACATCAACAA+TGG | 0.627588 | 6.3:+6555461 | None:intergenic |
| CATTGCGAGATAAGAGCTCA+GGG | 0.632574 | 6.3:-6555806 | None:intergenic |
| GGATCTCAAATCTTTAGTGA+AGG | 0.638048 | 6.3:+6555864 | MS.gene20444:CDS |
| GGTCAGCAATATGGTCAGCA+AGG | 0.646252 | 6.3:-6556187 | None:intergenic |
| CCAACATAGCCCATCTACTG+TGG | 0.651695 | 6.3:-6555764 | None:intergenic |
| GAAGGAGGACTTGACTACTT+GGG | 0.662695 | 6.3:+6555882 | MS.gene20444:CDS |
| CTCAGGGAAGACACATCCCA+AGG | 0.667407 | 6.3:-6555790 | None:intergenic |
| TGGTCAGCAAGGTTCTCTAG+AGG | 0.668903 | 6.3:-6556176 | None:intergenic |
| GTAGTCGACCCACTCTACCC+GGG | 0.676420 | 6.3:+6556014 | MS.gene20444:CDS |
| GGGTCGACTACCTCACCAAG+AGG | 0.687407 | 6.3:-6556002 | None:intergenic |
| ATGGGTCAAAGCTTCCACCC+GGG | 0.687648 | 6.3:-6556031 | None:intergenic |
| ACGTTCCTTCTGGAAGCCCG+TGG | 0.688327 | 6.3:+6555589 | MS.gene20444:CDS |
| GTCGACCCACTCTACCCGGG+TGG | 0.691664 | 6.3:+6556017 | MS.gene20444:CDS |
| CAATGGTGTCAAATTCGGCG+AGG | 0.704270 | 6.3:+6555824 | MS.gene20444:CDS |
| ATGGGCCCAAGTACTTGACA+CGG | 0.711188 | 6.3:-6555623 | None:intergenic |
| CACCAGGAAATTCACCAGTG+AGG | 0.714950 | 6.3:-6555668 | None:intergenic |
| AAGCCTCTGGATCATCAGCG+AGG | 0.746493 | 6.3:-6556058 | None:intergenic |
| GCATGGGAAGAATCACCATG+AGG | 0.752016 | 6.3:+6555547 | MS.gene20444:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TTAGCTATGTTCTCTATGTT+TGG | + | chr6.3:6556119-6556138 | MS.gene20444:CDS | 30.0% | |
| ! | TATGTTTGGATTTTTCGTTC+AGG | + | chr6.3:6556133-6556152 | MS.gene20444:CDS | 30.0% |
| AAGGTGAAAGAACTCAAGAA+TGG | + | chr6.3:6556092-6556111 | MS.gene20444:CDS | 35.0% | |
| GCTTGCCAAGTTATCTTAAT+GGG | + | chr6.3:6555948-6555967 | MS.gene20444:CDS | 35.0% | |
| GGATCTCAAATCTTTAGTGA+AGG | + | chr6.3:6555864-6555883 | MS.gene20444:CDS | 35.0% | |
| TCTCAAATCTTTAGTGAAGG+AGG | + | chr6.3:6555867-6555886 | MS.gene20444:CDS | 35.0% | |
| TCTCTTCTTCAACAATGGTT+GGG | + | chr6.3:6555487-6555506 | MS.gene20444:CDS | 35.0% | |
| TGAAAGAACTCAAGAATGGT+AGG | + | chr6.3:6556096-6556115 | MS.gene20444:CDS | 35.0% | |
| ! | ACAAAGCATCCTTGCAATTT+GGG | + | chr6.3:6555926-6555945 | MS.gene20444:CDS | 35.0% |
| AATTCACCAGTGAGGTAAGA+TGG | - | chr6.3:6555663-6555682 | None:intergenic | 40.0% | |
| AATTTCCTGGTGACTATGGT+TGG | + | chr6.3:6555679-6555698 | MS.gene20444:CDS | 40.0% | |
| ATCTTAATGGGAGCTGTTGA+GGG | + | chr6.3:6555960-6555979 | MS.gene20444:CDS | 40.0% | |
| ATTTCCTGGTGACTATGGTT+GGG | + | chr6.3:6555680-6555699 | MS.gene20444:CDS | 40.0% | |
| CAGCTCCCATTAAGATAACT+TGG | - | chr6.3:6555956-6555975 | None:intergenic | 40.0% | |
| CTCTCTTCTTCAACAATGGT+TGG | + | chr6.3:6555486-6555505 | MS.gene20444:CDS | 40.0% | |
| GGCTTGCCAAGTTATCTTAA+TGG | + | chr6.3:6555947-6555966 | MS.gene20444:CDS | 40.0% | |
| TATCTTAATGGGAGCTGTTG+AGG | + | chr6.3:6555959-6555978 | MS.gene20444:CDS | 40.0% | |
| TTCTTCAACAATGGTTGGGA+AGG | + | chr6.3:6555491-6555510 | MS.gene20444:CDS | 40.0% | |
| ! | CACAAAGCATCCTTGCAATT+TGG | + | chr6.3:6555925-6555944 | MS.gene20444:CDS | 40.0% |
| ! | TCTCGCAATGGTGTCAAATT+CGG | + | chr6.3:6555819-6555838 | MS.gene20444:CDS | 40.0% |
| !!! | ACGGTTTTTGGCAAATGTCT+CGG | - | chr6.3:6555730-6555749 | None:intergenic | 40.0% |
| ACCAAGAAGAACGTTCCTTC+TGG | + | chr6.3:6555579-6555598 | MS.gene20444:CDS | 45.0% | |
| AGAAGGAACGTTCTTCTTGG+TGG | - | chr6.3:6555580-6555599 | None:intergenic | 45.0% | |
| ATGGAGCTTCACCAGAGAAT+GGG | - | chr6.3:6555644-6555663 | None:intergenic | 45.0% | |
| CATTGCGAGATAAGAGCTCA+GGG | - | chr6.3:6555809-6555828 | None:intergenic | 45.0% | |
| GAAGGAGGACTTGACTACTT+GGG | + | chr6.3:6555882-6555901 | MS.gene20444:CDS | 45.0% | |
| GGCTCTCTCTTCTTCAACAA+TGG | + | chr6.3:6555482-6555501 | MS.gene20444:CDS | 45.0% | |
| GGTGAATTTCCTGGTGACTA+TGG | + | chr6.3:6555675-6555694 | MS.gene20444:CDS | 45.0% | |
| TACCTCACTGGTGAATTTCC+TGG | + | chr6.3:6555666-6555685 | MS.gene20444:CDS | 45.0% | |
| TCCAGAAGGAACGTTCTTCT+TGG | - | chr6.3:6555583-6555602 | None:intergenic | 45.0% | |
| TGAAGGAGGACTTGACTACT+TGG | + | chr6.3:6555881-6555900 | MS.gene20444:CDS | 45.0% | |
| TTCAACTCTGCAAAAGCCTC+TGG | - | chr6.3:6556074-6556093 | None:intergenic | 45.0% | |
| TTCGTTCAGGCCATTGTAAC+CGG | + | chr6.3:6556146-6556165 | MS.gene20444:CDS | 45.0% | |
| TTGCAAGGATGCTTTGTGCA+TGG | - | chr6.3:6555923-6555942 | None:intergenic | 45.0% | |
| TTTGCCACAAACTTTGTCCC+CGG | + | chr6.3:6556233-6556252 | MS.gene20444:CDS | 45.0% | |
| ! | AGAGGCTTTTGCAGAGTTGA+AGG | + | chr6.3:6556073-6556092 | MS.gene20444:CDS | 45.0% |
| !! | CACAGTAGATGGGCTATGTT+GGG | + | chr6.3:6555765-6555784 | MS.gene20444:CDS | 45.0% |
| !! | CTTGGTGGTTGTTTTCCTCA+TGG | - | chr6.3:6555565-6555584 | None:intergenic | 45.0% |
| !! | TTTGTGCATGGACTAGGCTT+GGG | - | chr6.3:6555911-6555930 | None:intergenic | 45.0% |
| !!! | CGGTTTTTGGCAAATGTCTC+GGG | - | chr6.3:6555729-6555748 | None:intergenic | 45.0% |
| !!! | GGTTTTTGGCAAATGTCTCG+GGG | - | chr6.3:6555728-6555747 | None:intergenic | 45.0% |
| AAGTACTTGGGCCCATTCTC+TGG | + | chr6.3:6555630-6555649 | MS.gene20444:CDS | 50.0% | |
| AATGGGTCAAAGCTTCCACC+CGG | - | chr6.3:6556035-6556054 | None:intergenic | 50.0% | |
| ACTATGGTTGGGACACTGCT+GGG | + | chr6.3:6555691-6555710 | MS.gene20444:CDS | 50.0% | |
| AGGTCCCTTTCCGGTTACAA+TGG | - | chr6.3:6556159-6556178 | None:intergenic | 50.0% | |
| ATGGGCCCAAGTACTTGACA+CGG | - | chr6.3:6555626-6555645 | None:intergenic | 50.0% | |
| ATTCTTCCCATGCCAAGGTC+TGG | - | chr6.3:6555540-6555559 | None:intergenic | 50.0% | |
| CAAGAGGTCCACCAGCAATA+CGG | - | chr6.3:6555989-6556008 | None:intergenic | 50.0% | |
| CACCAGGAAATTCACCAGTG+AGG | - | chr6.3:6555671-6555690 | None:intergenic | 50.0% | |
| CAGGCCATTGTAACCGGAAA+GGG | + | chr6.3:6556152-6556171 | MS.gene20444:CDS | 50.0% | |
| CCAACATAGCCCATCTACTG+TGG | - | chr6.3:6555767-6555786 | None:intergenic | 50.0% | |
| CCAGACCGTGTCAAGTACTT+GGG | + | chr6.3:6555618-6555637 | MS.gene20444:CDS | 50.0% | |
| CCATTGCGAGATAAGAGCTC+AGG | - | chr6.3:6555810-6555829 | None:intergenic | 50.0% | |
| CCTGAGCTCTTATCTCGCAA+TGG | + | chr6.3:6555807-6555826 | MS.gene20444:CDS | 50.0% | |
| CGAGGTCATCCACAGTAGAT+GGG | + | chr6.3:6555755-6555774 | MS.gene20444:CDS | 50.0% | |
| CTTGGCAAGCCCAAATTGCA+AGG | - | chr6.3:6555938-6555957 | None:intergenic | 50.0% | |
| CTTTCCGGGGACAAAGTTTG+TGG | - | chr6.3:6556240-6556259 | None:intergenic | 50.0% | |
| GAAGCTCCATCTTACCTCAC+TGG | + | chr6.3:6555654-6555673 | MS.gene20444:CDS | 50.0% | |
| GATGGAGCTTCACCAGAGAA+TGG | - | chr6.3:6555645-6555664 | None:intergenic | 50.0% | |
| GCATGGGAAGAATCACCATG+AGG | + | chr6.3:6555547-6555566 | MS.gene20444:CDS | 50.0% | |
| GGATGCTTTGTGCATGGACT+AGG | - | chr6.3:6555917-6555936 | None:intergenic | 50.0% | |
| GGGGACAAAGTTTGTGGCAA+AGG | - | chr6.3:6556234-6556253 | None:intergenic | 50.0% | |
| GGTCAGCAATATGGTCAGCA+AGG | - | chr6.3:6556190-6556209 | None:intergenic | 50.0% | |
| GTTGAGGGTTACCGTATTGC+TGG | + | chr6.3:6555975-6555994 | MS.gene20444:CDS | 50.0% | |
| TCAGGCCATTGTAACCGGAA+AGG | + | chr6.3:6556151-6556170 | MS.gene20444:CDS | 50.0% | |
| TCCAGACCGTGTCAAGTACT+TGG | + | chr6.3:6555617-6555636 | MS.gene20444:CDS | 50.0% | |
| TCGAGGTCATCCACAGTAGA+TGG | + | chr6.3:6555754-6555773 | MS.gene20444:CDS | 50.0% | |
| TCTACTCCAGACCTTGGCAT+GGG | + | chr6.3:6555531-6555550 | MS.gene20444:CDS | 50.0% | |
| TGCCAAAAACCGTGAACTCG+AGG | + | chr6.3:6555737-6555756 | MS.gene20444:CDS | 50.0% | |
| TGGTCAGCAAGGTTCTCTAG+AGG | - | chr6.3:6556179-6556198 | None:intergenic | 50.0% | |
| TGGTGATTCTTCCCATGCCA+AGG | - | chr6.3:6555545-6555564 | None:intergenic | 50.0% | |
| TGTGGATGACCTCGAGTTCA+CGG | - | chr6.3:6555749-6555768 | None:intergenic | 50.0% | |
| TGTTGACGGGGTCAGCAATA+TGG | - | chr6.3:6556199-6556218 | None:intergenic | 50.0% | |
| ! | ATGCCAAGGTCTGGAGTAGA+GGG | - | chr6.3:6555531-6555550 | None:intergenic | 50.0% |
| ! | CAATGGTGTCAAATTCGGCG+AGG | + | chr6.3:6555824-6555843 | MS.gene20444:CDS | 50.0% |
| ! | GACCTCGAGTTCACGGTTTT+TGG | - | chr6.3:6555742-6555761 | None:intergenic | 50.0% |
| ! | GGTGGAAGCTTTGACCCATT+GGG | + | chr6.3:6556035-6556054 | MS.gene20444:CDS | 50.0% |
| ! | GTTCTCTAGAGGTCCCTTTC+CGG | - | chr6.3:6556168-6556187 | None:intergenic | 50.0% |
| !! | CCACAGTAGATGGGCTATGT+TGG | + | chr6.3:6555764-6555783 | MS.gene20444:CDS | 50.0% |
| !! | CTTTGTGCATGGACTAGGCT+TGG | - | chr6.3:6555912-6555931 | None:intergenic | 50.0% |
| AAGCCTCTGGATCATCAGCG+AGG | - | chr6.3:6556061-6556080 | None:intergenic | 55.0% | |
| ACCCCGTCAACAACAACGCA+TGG | + | chr6.3:6556207-6556226 | MS.gene20444:CDS | 55.0% | |
| ATGGGTCAAAGCTTCCACCC+GGG | - | chr6.3:6556034-6556053 | None:intergenic | 55.0% | |
| CCCAAGTACTTGACACGGTC+TGG | - | chr6.3:6555621-6555640 | None:intergenic | 55.0% | |
| CCCCGTCAACAACAACGCAT+GGG | + | chr6.3:6556208-6556227 | MS.gene20444:CDS | 55.0% | |
| CTCAGGGAAGACACATCCCA+AGG | - | chr6.3:6555793-6555812 | None:intergenic | 55.0% | |
| CTCTACTCCAGACCTTGGCA+TGG | + | chr6.3:6555530-6555549 | MS.gene20444:CDS | 55.0% | |
| GACTATGGTTGGGACACTGC+TGG | + | chr6.3:6555690-6555709 | MS.gene20444:CDS | 55.0% | |
| GAGGGTTACCGTATTGCTGG+TGG | + | chr6.3:6555978-6555997 | MS.gene20444:CDS | 55.0% | |
| GATCATCAGCGAGGCCCAAT+GGG | - | chr6.3:6556052-6556071 | None:intergenic | 55.0% | |
| GTGTCCCAACCATAGTCACC+AGG | - | chr6.3:6555687-6555706 | None:intergenic | 55.0% | |
| TCAAATTCGGCGAGGCTGTG+TGG | + | chr6.3:6555832-6555851 | MS.gene20444:CDS | 55.0% | |
| TCTCCCTCTACTCCAGACCT+TGG | + | chr6.3:6555525-6555544 | MS.gene20444:CDS | 55.0% | |
| TGGGCTATGTTGGGTGCCTT+GGG | + | chr6.3:6555774-6555793 | MS.gene20444:CDS | 55.0% | |
| ! | ATGGGCTATGTTGGGTGCCT+TGG | + | chr6.3:6555773-6555792 | MS.gene20444:CDS | 55.0% |
| ! | CATGCCAAGGTCTGGAGTAG+AGG | - | chr6.3:6555532-6555551 | None:intergenic | 55.0% |
| ! | CCCATGCGTTGTTGTTGACG+GGG | - | chr6.3:6556211-6556230 | None:intergenic | 55.0% |
| ! | CGTATTGCTGGTGGACCTCT+TGG | + | chr6.3:6555987-6556006 | MS.gene20444:CDS | 55.0% |
| ! | GCCCATGCGTTGTTGTTGAC+GGG | - | chr6.3:6556212-6556231 | None:intergenic | 55.0% |
| ! | GGCCCATGCGTTGTTGTTGA+CGG | - | chr6.3:6556213-6556232 | None:intergenic | 55.0% |
| ! | GGGTGGAAGCTTTGACCCAT+TGG | + | chr6.3:6556034-6556053 | MS.gene20444:CDS | 55.0% |
| AAGCTTCCACCCGGGTAGAG+TGG | - | chr6.3:6556026-6556045 | None:intergenic | 60.0% | |
| ACACGGTCTGGACCGTACCA+CGG | - | chr6.3:6555609-6555628 | None:intergenic | 60.0% | |
| AGCTTCCACCCGGGTAGAGT+GGG | - | chr6.3:6556025-6556044 | None:intergenic | 60.0% | |
| GAGGCTGTGTGGTTCAAGGC+AGG | + | chr6.3:6555843-6555862 | MS.gene20444:CDS | 60.0% | |
| GGATCATCAGCGAGGCCCAA+TGG | - | chr6.3:6556053-6556072 | None:intergenic | 60.0% | |
| GGGTCGACTACCTCACCAAG+AGG | - | chr6.3:6556005-6556024 | None:intergenic | 60.0% | |
| GGTAGTCGACCCACTCTACC+CGG | + | chr6.3:6556013-6556032 | MS.gene20444:CDS | 60.0% | |
| GTAGTCGACCCACTCTACCC+GGG | + | chr6.3:6556014-6556033 | MS.gene20444:CDS | 60.0% | |
| ! | ACGTTCCTTCTGGAAGCCCG+TGG | + | chr6.3:6555589-6555608 | MS.gene20444:CDS | 60.0% |
| ! | CCTTCTGGAAGCCCGTGGTA+CGG | + | chr6.3:6555594-6555613 | MS.gene20444:CDS | 60.0% |
| ! | TGCTGGTGGACCTCTTGGTG+AGG | + | chr6.3:6555992-6556011 | MS.gene20444:CDS | 60.0% |
| CACGGTCTGGACCGTACCAC+GGG | - | chr6.3:6555608-6555627 | None:intergenic | 65.0% | |
| CCGTACCACGGGCTTCCAGA+AGG | - | chr6.3:6555597-6555616 | None:intergenic | 65.0% | |
| CGGCGAGGCTGTGTGGTTCA+AGG | + | chr6.3:6555839-6555858 | MS.gene20444:CDS | 65.0% | |
| GGGCCTCGCTGATGATCCAG+AGG | + | chr6.3:6556055-6556074 | MS.gene20444:CDS | 65.0% | |
| GTCGACCCACTCTACCCGGG+TGG | + | chr6.3:6556017-6556036 | MS.gene20444:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 6555465 | 6556262 | 6555465 | ID=MS.gene20444 |
| chr6.3 | mRNA | 6555465 | 6556262 | 6555465 | ID=MS.gene20444.t1;Parent=MS.gene20444 |
| chr6.3 | exon | 6555465 | 6556262 | 6555465 | ID=MS.gene20444.t1.exon1;Parent=MS.gene20444.t1 |
| chr6.3 | CDS | 6555465 | 6556262 | 6555465 | ID=cds.MS.gene20444.t1;Parent=MS.gene20444.t1 |
| Gene Sequence |
| Protein sequence |
