Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20445.t1 | XP_013450967.1 | 97.4 | 265 | 7 | 0 | 1 | 265 | 1 | 265 | 3.10E-146 | 527.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20445.t1 | P27495 | 89.1 | 267 | 27 | 2 | 1 | 265 | 1 | 267 | 5.3e-139 | 495.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20445.t1 | A0A072U5R4 | 97.4 | 265 | 7 | 0 | 1 | 265 | 1 | 265 | 2.2e-146 | 527.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene20445 | 0.80763 | 4.60E-50 | -1.69E-46 |
| MS.gene049173 | MS.gene20445 | 0.826512 | 2.61E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene20445 | 0.846946 | 1.58E-59 | -1.69E-46 |
| MS.gene049222 | MS.gene20445 | 0.807197 | 5.69E-50 | -1.69E-46 |
| MS.gene049232 | MS.gene20445 | 0.810526 | 1.10E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene20445 | 0.884553 | 1.74E-71 | -1.69E-46 |
| MS.gene049320 | MS.gene20445 | 0.890692 | 7.83E-74 | -1.69E-46 |
| MS.gene049369 | MS.gene20445 | 0.80744 | 5.05E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene20445 | 0.802357 | 5.83E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene20445 | 0.805559 | 1.26E-49 | -1.69E-46 |
| MS.gene049614 | MS.gene20445 | 0.802596 | 5.20E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene20445 | 0.828564 | 8.38E-55 | -1.69E-46 |
| MS.gene049828 | MS.gene20445 | 0.816727 | 4.77E-52 | -1.69E-46 |
| MS.gene049907 | MS.gene20445 | 0.806022 | 1.01E-49 | -1.69E-46 |
| MS.gene05010 | MS.gene20445 | 0.835481 | 1.64E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene20445 | 0.866123 | 3.59E-65 | -1.69E-46 |
| MS.gene050165 | MS.gene20445 | 0.85377 | 1.92E-61 | -1.69E-46 |
| MS.gene050216 | MS.gene20445 | 0.805064 | 1.60E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene20445 | 0.854787 | 9.75E-62 | -1.69E-46 |
| MS.gene050432 | MS.gene20445 | 0.839202 | 1.82E-57 | -1.69E-46 |
| MS.gene050444 | MS.gene20445 | 0.804075 | 2.57E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene20445 | 0.843224 | 1.60E-58 | -1.69E-46 |
| MS.gene050518 | MS.gene20445 | 0.857225 | 1.89E-62 | -1.69E-46 |
| MS.gene050520 | MS.gene20445 | 0.833017 | 6.79E-56 | -1.69E-46 |
| MS.gene050612 | MS.gene20445 | 0.870073 | 1.92E-66 | -1.69E-46 |
| MS.gene050662 | MS.gene20445 | 0.823756 | 1.17E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene20445 | 0.827711 | 1.35E-54 | -1.69E-46 |
| MS.gene050686 | MS.gene20445 | 0.851322 | 9.57E-61 | -1.69E-46 |
| MS.gene050699 | MS.gene20445 | 0.839985 | 1.14E-57 | -1.69E-46 |
| MS.gene050767 | MS.gene20445 | 0.88641 | 3.51E-72 | -1.69E-46 |
| MS.gene050770 | MS.gene20445 | 0.884531 | 1.77E-71 | -1.69E-46 |
| MS.gene050772 | MS.gene20445 | 0.861206 | 1.21E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene20445 | 0.866081 | 3.70E-65 | -1.69E-46 |
| MS.gene05100 | MS.gene20445 | 0.843072 | 1.75E-58 | -1.69E-46 |
| MS.gene051228 | MS.gene20445 | 0.874835 | 4.95E-68 | -1.69E-46 |
| MS.gene051509 | MS.gene20445 | 0.811579 | 6.52E-51 | -1.69E-46 |
| MS.gene051551 | MS.gene20445 | 0.84581 | 3.22E-59 | -1.69E-46 |
| MS.gene051666 | MS.gene20445 | 0.805101 | 1.57E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene20445 | 0.828873 | 7.06E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene20445 | 0.891817 | 2.81E-74 | -1.69E-46 |
| MS.gene051858 | MS.gene20445 | 0.806994 | 6.28E-50 | -1.69E-46 |
| MS.gene051949 | MS.gene20445 | 0.827133 | 1.85E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene20445 | 0.916082 | 2.73E-85 | -1.69E-46 |
| MS.gene052290 | MS.gene20445 | 0.829992 | 3.77E-55 | -1.69E-46 |
| MS.gene052379 | MS.gene20445 | 0.833525 | 5.07E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene20445 | 0.820411 | 6.96E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene20445 | 0.805881 | 1.08E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene20445 | 0.847244 | 1.31E-59 | -1.69E-46 |
| MS.gene053009 | MS.gene20445 | 0.845598 | 3.68E-59 | -1.69E-46 |
| MS.gene053018 | MS.gene20445 | 0.806864 | 6.69E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene20445 | 0.807297 | 5.42E-50 | -1.69E-46 |
| MS.gene053104 | MS.gene20445 | 0.839645 | 1.40E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene20445 | 0.835664 | 1.47E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene20445 | 0.869882 | 2.22E-66 | -1.69E-46 |
| MS.gene053286 | MS.gene20445 | 0.868344 | 7.00E-66 | -1.69E-46 |
| MS.gene053322 | MS.gene20445 | 0.858926 | 5.89E-63 | -1.69E-46 |
| MS.gene053384 | MS.gene20445 | 0.830168 | 3.42E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene20445 | 0.806764 | 7.02E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene20445 | 0.836816 | 7.50E-57 | -1.69E-46 |
| MS.gene053813 | MS.gene20445 | 0.850892 | 1.27E-60 | -1.69E-46 |
| MS.gene053916 | MS.gene20445 | 0.855327 | 6.80E-62 | -1.69E-46 |
| MS.gene054376 | MS.gene20445 | 0.860023 | 2.76E-63 | -1.69E-46 |
| MS.gene054595 | MS.gene20445 | 0.809433 | 1.90E-50 | -1.69E-46 |
| MS.gene054600 | MS.gene20445 | 0.84013 | 1.05E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene20445 | 0.899153 | 2.63E-77 | -1.69E-46 |
| MS.gene054802 | MS.gene20445 | 0.8214 | 4.12E-53 | -1.69E-46 |
| MS.gene054803 | MS.gene20445 | 0.818108 | 2.33E-52 | -1.69E-46 |
| MS.gene054804 | MS.gene20445 | 0.826461 | 2.68E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene20445 | 0.866821 | 2.15E-65 | -1.69E-46 |
| MS.gene05505 | MS.gene20445 | 0.829893 | 3.99E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene20445 | 0.813295 | 2.75E-51 | -1.69E-46 |
| MS.gene055212 | MS.gene20445 | 0.824057 | 9.92E-54 | -1.69E-46 |
| MS.gene055254 | MS.gene20445 | 0.838288 | 3.14E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene20445 | 0.868939 | 4.50E-66 | -1.69E-46 |
| MS.gene055397 | MS.gene20445 | 0.884409 | 1.97E-71 | -1.69E-46 |
| MS.gene055499 | MS.gene20445 | 0.847863 | 8.84E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene20445 | 0.829651 | 4.57E-55 | -1.69E-46 |
| MS.gene055634 | MS.gene20445 | 0.809622 | 1.73E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene20445 | 0.867619 | 1.20E-65 | -1.69E-46 |
| MS.gene055638 | MS.gene20445 | 0.864639 | 1.05E-64 | -1.69E-46 |
| MS.gene055647 | MS.gene20445 | 0.85877 | 6.56E-63 | -1.69E-46 |
| MS.gene055722 | MS.gene20445 | 0.872595 | 2.82E-67 | -1.69E-46 |
| MS.gene055776 | MS.gene20445 | 0.832268 | 1.04E-55 | -1.69E-46 |
| MS.gene05592 | MS.gene20445 | 0.884791 | 1.42E-71 | -1.69E-46 |
| MS.gene055941 | MS.gene20445 | 0.806179 | 9.33E-50 | -1.69E-46 |
| MS.gene055956 | MS.gene20445 | -0.811415 | 7.08E-51 | -1.69E-46 |
| MS.gene056083 | MS.gene20445 | 0.80174 | 7.81E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene20445 | 0.903383 | 3.67E-79 | -1.69E-46 |
| MS.gene056422 | MS.gene20445 | 0.803178 | 3.95E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene20445 | 0.818416 | 1.98E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene20445 | 0.815844 | 7.51E-52 | -1.69E-46 |
| MS.gene056510 | MS.gene20445 | 0.835507 | 1.61E-56 | -1.69E-46 |
| MS.gene056549 | MS.gene20445 | 0.801855 | 7.39E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene20445 | 0.818102 | 2.34E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene20445 | 0.894934 | 1.55E-75 | -1.69E-46 |
| MS.gene057011 | MS.gene20445 | 0.80082 | 1.20E-48 | -1.69E-46 |
| MS.gene057129 | MS.gene20445 | 0.890405 | 1.01E-73 | -1.69E-46 |
| MS.gene057331 | MS.gene20445 | 0.842023 | 3.33E-58 | -1.69E-46 |
| MS.gene05735 | MS.gene20445 | 0.803858 | 2.85E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene20445 | 0.853699 | 2.01E-61 | -1.69E-46 |
| MS.gene057926 | MS.gene20445 | 0.856327 | 3.47E-62 | -1.69E-46 |
| MS.gene058019 | MS.gene20445 | 0.8229 | 1.85E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene20445 | 0.803192 | 3.92E-49 | -1.69E-46 |
| MS.gene058323 | MS.gene20445 | 0.811771 | 5.93E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene20445 | 0.876046 | 1.91E-68 | -1.69E-46 |
| MS.gene058459 | MS.gene20445 | 0.830256 | 3.25E-55 | -1.69E-46 |
| MS.gene058723 | MS.gene20445 | 0.848447 | 6.10E-60 | -1.69E-46 |
| MS.gene058773 | MS.gene20445 | 0.836977 | 6.82E-57 | -1.69E-46 |
| MS.gene058903 | MS.gene20445 | 0.856245 | 3.66E-62 | -1.69E-46 |
| MS.gene059022 | MS.gene20445 | 0.863508 | 2.37E-64 | -1.69E-46 |
| MS.gene059029 | MS.gene20445 | 0.837078 | 6.43E-57 | -1.69E-46 |
| MS.gene05913 | MS.gene20445 | 0.833348 | 5.62E-56 | -1.69E-46 |
| MS.gene059367 | MS.gene20445 | 0.815823 | 7.59E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene20445 | 0.804378 | 2.22E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene20445 | 0.858228 | 9.52E-63 | -1.69E-46 |
| MS.gene059711 | MS.gene20445 | 0.841592 | 4.33E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene20445 | 0.836135 | 1.12E-56 | -1.69E-46 |
| MS.gene059858 | MS.gene20445 | 0.818267 | 2.14E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene20445 | 0.836474 | 9.16E-57 | -1.69E-46 |
| MS.gene059960 | MS.gene20445 | 0.854114 | 1.53E-61 | -1.69E-46 |
| MS.gene059974 | MS.gene20445 | 0.80088 | 1.17E-48 | -1.69E-46 |
| MS.gene060005 | MS.gene20445 | 0.800574 | 1.35E-48 | -1.69E-46 |
| MS.gene060193 | MS.gene20445 | 0.83912 | 1.92E-57 | -1.69E-46 |
| MS.gene060341 | MS.gene20445 | 0.805434 | 1.34E-49 | -1.69E-46 |
| MS.gene060356 | MS.gene20445 | 0.842803 | 2.07E-58 | -1.69E-46 |
| MS.gene060482 | MS.gene20445 | 0.829261 | 5.68E-55 | -1.69E-46 |
| MS.gene060703 | MS.gene20445 | 0.813727 | 2.21E-51 | -1.69E-46 |
| MS.gene060727 | MS.gene20445 | 0.80792 | 3.99E-50 | -1.69E-46 |
| MS.gene060728 | MS.gene20445 | 0.813174 | 2.93E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene20445 | 0.853004 | 3.18E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene20445 | 0.843072 | 1.75E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene20445 | 0.805577 | 1.25E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene20445 | 0.829017 | 6.51E-55 | -1.69E-46 |
| MS.gene061134 | MS.gene20445 | 0.843053 | 1.78E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene20445 | 0.836004 | 1.21E-56 | -1.69E-46 |
| MS.gene061171 | MS.gene20445 | 0.805321 | 1.41E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene20445 | 0.877219 | 7.49E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene99767 | MS.gene20445 | PPI |
| MS.gene031028 | MS.gene20445 | PPI |
| MS.gene20445 | MS.gene028321 | PPI |
| MS.gene20445 | MS.gene031030 | PPI |
| MS.gene20446 | MS.gene20445 | PPI |
| MS.gene20444 | MS.gene20445 | PPI |
| MS.gene20445 | MS.gene35137 | PPI |
| MS.gene20445 | MS.gene93362 | PPI |
| MS.gene38046 | MS.gene20445 | PPI |
| MS.gene20445 | MS.gene88379 | PPI |
| MS.gene36470 | MS.gene20445 | PPI |
| MS.gene20445 | MS.gene03545 | PPI |
| MS.gene031355 | MS.gene20445 | PPI |
| MS.gene20443 | MS.gene20445 | PPI |
| MS.gene031016 | MS.gene20445 | PPI |
| MS.gene028321 | MS.gene20445 | PPI |
| MS.gene023132 | MS.gene20445 | PPI |
| MS.gene38214 | MS.gene20445 | PPI |
| MS.gene20445 | MS.gene020883 | PPI |
| MS.gene81230 | MS.gene20445 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20445.t1 | MTR_6g011890 | 97.358 | 265 | 7 | 0 | 1 | 265 | 1 | 265 | 0.0 | 525 |
| MS.gene20445.t1 | MTR_6g012080 | 92.830 | 265 | 19 | 0 | 1 | 265 | 1 | 265 | 0.0 | 510 |
| MS.gene20445.t1 | MTR_6g011880 | 95.849 | 265 | 11 | 0 | 1 | 265 | 1 | 265 | 0.0 | 505 |
| MS.gene20445.t1 | MTR_6g011870 | 95.849 | 265 | 11 | 0 | 1 | 265 | 1 | 265 | 0.0 | 504 |
| MS.gene20445.t1 | MTR_6g012110 | 92.830 | 265 | 19 | 0 | 1 | 265 | 1 | 265 | 3.91e-179 | 493 |
| MS.gene20445.t1 | MTR_4g094605 | 89.850 | 266 | 26 | 1 | 1 | 265 | 1 | 266 | 1.38e-178 | 492 |
| MS.gene20445.t1 | MTR_5g097280 | 75.281 | 267 | 58 | 3 | 4 | 265 | 2 | 265 | 7.96e-148 | 414 |
| MS.gene20445.t1 | MTR_6g043600 | 82.700 | 237 | 20 | 2 | 29 | 265 | 14 | 229 | 2.83e-139 | 391 |
| MS.gene20445.t1 | MTR_2g081090 | 77.523 | 218 | 47 | 2 | 49 | 264 | 19 | 236 | 5.18e-119 | 340 |
| MS.gene20445.t1 | MTR_2g081090 | 77.523 | 218 | 47 | 2 | 49 | 264 | 46 | 263 | 8.83e-119 | 340 |
| MS.gene20445.t1 | MTR_6g060175 | 53.110 | 209 | 89 | 4 | 49 | 253 | 71 | 274 | 1.77e-64 | 203 |
| MS.gene20445.t1 | MTR_1g026550 | 45.038 | 262 | 131 | 8 | 4 | 253 | 62 | 322 | 6.92e-62 | 198 |
| MS.gene20445.t1 | MTR_6g060175 | 51.196 | 209 | 83 | 5 | 49 | 253 | 71 | 264 | 4.72e-58 | 186 |
| MS.gene20445.t1 | MTR_5g098785 | 36.264 | 273 | 139 | 9 | 6 | 253 | 7 | 269 | 8.16e-37 | 132 |
| MS.gene20445.t1 | MTR_5g098780 | 35.943 | 281 | 135 | 11 | 3 | 253 | 2 | 267 | 1.15e-36 | 131 |
| MS.gene20445.t1 | MTR_6g033320 | 43.005 | 193 | 90 | 6 | 66 | 253 | 56 | 233 | 2.22e-36 | 129 |
| MS.gene20445.t1 | MTR_8g023790 | 35.055 | 271 | 124 | 12 | 9 | 262 | 28 | 263 | 3.79e-36 | 129 |
| MS.gene20445.t1 | MTR_3g101670 | 38.424 | 203 | 93 | 6 | 64 | 249 | 66 | 253 | 4.37e-34 | 124 |
| MS.gene20445.t1 | MTR_2g042720 | 36.726 | 226 | 107 | 9 | 52 | 260 | 60 | 266 | 9.87e-32 | 118 |
| MS.gene20445.t1 | MTR_3g435460 | 35.533 | 197 | 103 | 5 | 65 | 252 | 62 | 243 | 6.21e-30 | 113 |
| MS.gene20445.t1 | MTR_1g026550 | 43.333 | 150 | 80 | 4 | 23 | 168 | 82 | 230 | 1.34e-28 | 109 |
| MS.gene20445.t1 | MTR_4g015570 | 43.293 | 164 | 78 | 7 | 91 | 253 | 132 | 281 | 1.43e-27 | 107 |
| MS.gene20445.t1 | MTR_3g435460 | 34.392 | 189 | 100 | 5 | 73 | 252 | 9 | 182 | 3.35e-26 | 101 |
| MS.gene20445.t1 | MTR_3g070340 | 44.872 | 156 | 65 | 8 | 92 | 243 | 136 | 274 | 2.16e-21 | 90.9 |
| MS.gene20445.t1 | MTR_5g098770 | 55.405 | 74 | 32 | 1 | 181 | 253 | 13 | 86 | 3.02e-21 | 85.9 |
| MS.gene20445.t1 | MTR_2g008610 | 32.850 | 207 | 89 | 8 | 66 | 242 | 73 | 259 | 1.44e-17 | 80.1 |
| MS.gene20445.t1 | MTR_2g436960 | 50.685 | 73 | 29 | 2 | 180 | 252 | 27 | 92 | 7.88e-13 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20445.t1 | AT1G29930 | 86.891 | 267 | 33 | 2 | 1 | 265 | 1 | 267 | 6.34e-171 | 473 |
| MS.gene20445.t1 | AT1G29920 | 86.517 | 267 | 34 | 2 | 1 | 265 | 1 | 267 | 4.42e-170 | 470 |
| MS.gene20445.t1 | AT1G29910 | 86.517 | 267 | 34 | 2 | 1 | 265 | 1 | 267 | 4.42e-170 | 470 |
| MS.gene20445.t1 | AT2G34430 | 87.266 | 267 | 31 | 3 | 1 | 265 | 1 | 266 | 1.89e-169 | 469 |
| MS.gene20445.t1 | AT2G34420 | 85.768 | 267 | 34 | 3 | 1 | 265 | 1 | 265 | 1.23e-166 | 461 |
| MS.gene20445.t1 | AT3G27690 | 77.491 | 271 | 50 | 4 | 2 | 265 | 32 | 298 | 2.98e-151 | 424 |
| MS.gene20445.t1 | AT2G05070 | 77.985 | 268 | 49 | 5 | 4 | 265 | 2 | 265 | 1.27e-150 | 421 |
| MS.gene20445.t1 | AT3G27690 | 77.695 | 269 | 49 | 4 | 4 | 265 | 2 | 266 | 1.39e-150 | 421 |
| MS.gene20445.t1 | AT2G05100 | 76.866 | 268 | 52 | 4 | 4 | 265 | 2 | 265 | 2.45e-149 | 418 |
| MS.gene20445.t1 | AT2G05100 | 75.417 | 240 | 49 | 4 | 4 | 237 | 2 | 237 | 5.86e-127 | 363 |
| MS.gene20445.t1 | AT5G54270 | 78.995 | 219 | 42 | 4 | 49 | 264 | 47 | 264 | 5.85e-119 | 341 |
| MS.gene20445.t1 | AT1G76570 | 47.186 | 231 | 112 | 5 | 33 | 253 | 90 | 320 | 9.19e-63 | 200 |
| MS.gene20445.t1 | AT4G10340 | 51.675 | 209 | 92 | 4 | 49 | 253 | 62 | 265 | 2.97e-60 | 192 |
| MS.gene20445.t1 | AT3G54890 | 44.041 | 193 | 88 | 6 | 66 | 253 | 55 | 232 | 1.46e-37 | 132 |
| MS.gene20445.t1 | AT1G61520 | 41.014 | 217 | 93 | 9 | 62 | 253 | 59 | 265 | 3.58e-37 | 132 |
| MS.gene20445.t1 | AT1G61520 | 41.014 | 217 | 93 | 9 | 62 | 253 | 59 | 265 | 3.58e-37 | 132 |
| MS.gene20445.t1 | AT1G45474 | 41.969 | 193 | 97 | 5 | 66 | 249 | 56 | 242 | 2.07e-36 | 130 |
| MS.gene20445.t1 | AT1G45474 | 41.969 | 193 | 97 | 5 | 66 | 249 | 56 | 242 | 2.07e-36 | 130 |
| MS.gene20445.t1 | AT3G61470 | 38.596 | 228 | 98 | 10 | 52 | 262 | 50 | 252 | 1.14e-35 | 128 |
| MS.gene20445.t1 | AT1G61520 | 39.614 | 207 | 90 | 9 | 73 | 254 | 15 | 211 | 8.25e-34 | 122 |
| MS.gene20445.t1 | AT3G47470 | 40.625 | 192 | 100 | 7 | 65 | 252 | 63 | 244 | 4.75e-31 | 116 |
| MS.gene20445.t1 | AT1G19150 | 36.283 | 226 | 108 | 8 | 52 | 260 | 63 | 269 | 4.93e-31 | 116 |
| MS.gene20445.t1 | AT3G08940 | 34.686 | 271 | 107 | 12 | 27 | 253 | 35 | 279 | 1.97e-28 | 110 |
| MS.gene20445.t1 | AT5G01530 | 44.512 | 164 | 76 | 8 | 91 | 253 | 133 | 282 | 3.58e-27 | 106 |
| MS.gene20445.t1 | AT3G54890 | 38.220 | 191 | 68 | 6 | 66 | 253 | 55 | 198 | 6.03e-24 | 96.3 |
| MS.gene20445.t1 | AT3G54890 | 40.764 | 157 | 74 | 5 | 66 | 218 | 55 | 196 | 8.42e-24 | 95.9 |
| MS.gene20445.t1 | AT2G40100 | 41.935 | 155 | 70 | 7 | 92 | 243 | 135 | 272 | 8.01e-23 | 94.7 |
| MS.gene20445.t1 | AT1G15820 | 34.300 | 207 | 86 | 8 | 66 | 242 | 70 | 256 | 2.09e-18 | 82.4 |
| MS.gene20445.t1 | AT5G28450 | 52.632 | 76 | 28 | 3 | 189 | 262 | 99 | 168 | 5.64e-14 | 68.6 |
| MS.gene20445.t1 | AT3G54890 | 42.353 | 85 | 41 | 2 | 66 | 149 | 55 | 132 | 2.66e-11 | 61.2 |
Find 107 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAAGCATCCTTGCTATT+TGG | 0.098078 | 6.3:+6553027 | MS.gene20445:CDS |
| GTCTCTCTCTTCTTCATCAT+TGG | 0.251189 | 6.3:+6552584 | MS.gene20445:CDS |
| TTTGTTCAAGCTATTGTTAC+TGG | 0.254583 | 6.3:+6553248 | MS.gene20445:CDS |
| GCCCATGCATTGTTGTTAAC+TGG | 0.254828 | 6.3:-6553311 | None:intergenic |
| GGCTTGCCAAGTTATCTTAA+TGG | 0.266805 | 6.3:+6553049 | MS.gene20445:CDS |
| CTCTCTTCTTCATCATTGGT+TGG | 0.280485 | 6.3:+6552588 | MS.gene20445:CDS |
| TCCAGAAGGGACGTTCTTCT+TGG | 0.287137 | 6.3:-6552682 | None:intergenic |
| ATGGGCTATGTTGGGTGCCT+TGG | 0.311551 | 6.3:+6552875 | MS.gene20445:CDS |
| ACAAAGCATCCTTGCTATTT+GGG | 0.328738 | 6.3:+6553028 | MS.gene20445:CDS |
| TATCTCACTGGTGAATTTCC+TGG | 0.333598 | 6.3:+6552768 | MS.gene20445:CDS |
| CCAACATAGCCCATCTACTA+TGG | 0.333705 | 6.3:-6552866 | None:intergenic |
| TGAGGGTGGGCTTGACTACT+TGG | 0.346197 | 6.3:+6552983 | MS.gene20445:CDS |
| TCGAGGTCATCCATAGTAGA+TGG | 0.361117 | 6.3:+6552856 | MS.gene20445:CDS |
| GGTGAATTTCCTGGTGACTA+TGG | 0.363361 | 6.3:+6552777 | MS.gene20445:CDS |
| GCTTGCCAAGTTATCTTAAT+GGG | 0.373943 | 6.3:+6553050 | MS.gene20445:CDS |
| TTCAACTCTGCAAAAGCCTC+TGG | 0.374792 | 6.3:-6553173 | None:intergenic |
| TTCTTCATCATTGGTTGGGC+AGG | 0.375767 | 6.3:+6552593 | MS.gene20445:CDS |
| GTCGAGGGTTATCGTATTGC+TGG | 0.376706 | 6.3:+6553077 | MS.gene20445:CDS |
| TCTCTTCTTCATCATTGGTT+GGG | 0.384635 | 6.3:+6552589 | MS.gene20445:CDS |
| AAGTACTTGGGTCCATTCTC+TGG | 0.385387 | 6.3:+6552732 | MS.gene20445:CDS |
| CTTTGTGCATGGACTAGACT+TGG | 0.388090 | 6.3:-6553011 | None:intergenic |
| TCCCCTTCCACCCAAGACTT+TGG | 0.392962 | 6.3:+6552627 | MS.gene20445:CDS |
| TGGGCTATGTTGGGTGCCTT+GGG | 0.394640 | 6.3:+6552876 | MS.gene20445:CDS |
| CTTTCCAGGGGCAAAGTTTG+TGG | 0.397939 | 6.3:-6553339 | None:intergenic |
| ACCAAGAAGAACGTCCCTTC+TGG | 0.405063 | 6.3:+6552681 | MS.gene20445:CDS |
| ATGTGTCTTCCCCGAGCTCT+TGG | 0.408051 | 6.3:+6552899 | MS.gene20445:CDS |
| CCCAAGTACTTGACACGGTC+TGG | 0.412244 | 6.3:-6552720 | None:intergenic |
| CCCATGCATTGTTGTTAACT+GGG | 0.415433 | 6.3:-6553310 | None:intergenic |
| TCCAGACCGTGTCAAGTACT+TGG | 0.415714 | 6.3:+6552719 | MS.gene20445:CDS |
| GCTCGCAATGGTGTCAAATT+CGG | 0.416188 | 6.3:+6552921 | MS.gene20445:CDS |
| TTCTTCCCACTCCAAAGTCT+TGG | 0.418354 | 6.3:-6552638 | None:intergenic |
| GGGTCGTCAGCGAGGCCTAA+TGG | 0.426822 | 6.3:-6553152 | None:intergenic |
| CGGTGAGGCCGTGTGGTTCA+AGG | 0.437405 | 6.3:+6552941 | MS.gene20445:CDS |
| CCATTGCGAGCCAAGAGCTC+GGG | 0.440871 | 6.3:-6552909 | None:intergenic |
| GGAGGAAGCTTTGATCCATT+AGG | 0.441127 | 6.3:+6553137 | MS.gene20445:CDS |
| TCTTCCCACTCCAAAGTCTT+GGG | 0.445773 | 6.3:-6552637 | None:intergenic |
| CAGCTCCCATTAAGATAACT+TGG | 0.448665 | 6.3:-6553055 | None:intergenic |
| CCATAGTAGATGGGCTATGT+TGG | 0.453074 | 6.3:+6552866 | MS.gene20445:CDS |
| CGTATTGCTGGTGGACCTCT+CGG | 0.477663 | 6.3:+6553089 | MS.gene20445:CDS |
| CATAGTAGATGGGCTATGTT+GGG | 0.478780 | 6.3:+6552867 | MS.gene20445:CDS |
| CCCGAGCTCTTGGCTCGCAA+TGG | 0.480396 | 6.3:+6552909 | MS.gene20445:CDS |
| ACCATTGCGAGCCAAGAGCT+CGG | 0.485012 | 6.3:-6552910 | None:intergenic |
| AGGGGCAAAGTTTGTGGCAT+AGG | 0.488535 | 6.3:-6553333 | None:intergenic |
| TATGGATGACCTCGAGTTCA+CGG | 0.489522 | 6.3:-6552848 | None:intergenic |
| AATTTCCTGGTGACTATGGT+TGG | 0.489803 | 6.3:+6552781 | MS.gene20445:CDS |
| CAAGCTATTGTTACTGGGAA+AGG | 0.491561 | 6.3:+6553254 | MS.gene20445:CDS |
| ACCCAGTTAACAACAATGCA+TGG | 0.495325 | 6.3:+6553309 | MS.gene20445:CDS |
| TCCAAAGTCTTGGGTGGAAG+GGG | 0.496093 | 6.3:-6552628 | None:intergenic |
| AATTCACCAGTGAGATAAGA+TGG | 0.497319 | 6.3:-6552762 | None:intergenic |
| CTCCAAAGTCTTGGGTGGAA+GGG | 0.499181 | 6.3:-6552629 | None:intergenic |
| AATGGATCAAAGCTTCCTCC+TGG | 0.501671 | 6.3:-6553134 | None:intergenic |
| AGCTTCCTCCTGGGTAGAGT+GGG | 0.512596 | 6.3:-6553124 | None:intergenic |
| CTCAAATCTTTAGTGAGGGT+GGG | 0.514800 | 6.3:+6552970 | MS.gene20445:CDS |
| AGAAGGGACGTTCTTCTTGG+TGG | 0.518277 | 6.3:-6552679 | None:intergenic |
| GATGGAGCTTCACCAGAGAA+TGG | 0.521371 | 6.3:-6552744 | None:intergenic |
| GACTATGGTTGGGATACTGC+TGG | 0.521378 | 6.3:+6552792 | MS.gene20445:CDS |
| ACTCCAAAGTCTTGGGTGGA+AGG | 0.521517 | 6.3:-6552630 | None:intergenic |
| TATCTTAATGGGAGCTGTCG+AGG | 0.526516 | 6.3:+6553061 | MS.gene20445:CDS |
| TTGTTCAAGCTATTGTTACT+GGG | 0.528641 | 6.3:+6553249 | MS.gene20445:CDS |
| GAAGCTCCATCTTATCTCAC+TGG | 0.536768 | 6.3:+6552756 | MS.gene20445:CDS |
| GAGGCCGTGTGGTTCAAGGC+AGG | 0.541085 | 6.3:+6552945 | MS.gene20445:CDS |
| TATGCCACAAACTTTGCCCC+TGG | 0.544109 | 6.3:+6553335 | MS.gene20445:CDS |
| ATTTCCTGGTGACTATGGTT+GGG | 0.544993 | 6.3:+6552782 | MS.gene20445:CDS |
| AGACATTGTTGAAGCAGCCA+TGG | 0.546418 | 6.3:-6552565 | None:intergenic |
| TGGTCAGCAAGATTCTCTAT+AGG | 0.546492 | 6.3:-6553278 | None:intergenic |
| ATCTTAATGGGAGCTGTCGA+GGG | 0.551338 | 6.3:+6553062 | MS.gene20445:CDS |
| TCCCACTCCAAAGTCTTGGG+TGG | 0.554739 | 6.3:-6552634 | None:intergenic |
| TCTCAAATCTTTAGTGAGGG+TGG | 0.555153 | 6.3:+6552969 | MS.gene20445:CDS |
| AAGCTTCCTCCTGGGTAGAG+TGG | 0.560457 | 6.3:-6553125 | None:intergenic |
| CCTTCTGGAAGCCCATGGTA+TGG | 0.562749 | 6.3:+6552696 | MS.gene20445:CDS |
| ACACGGTCTGGACCATACCA+TGG | 0.565732 | 6.3:-6552708 | None:intergenic |
| TCCACCCAAGACTTTGGAGT+GGG | 0.566644 | 6.3:+6552633 | MS.gene20445:CDS |
| TGTTGTTAACTGGGTCCGCA+AGG | 0.569379 | 6.3:-6553301 | None:intergenic |
| TCAACTCTGCAAAAGCCTCT+GGG | 0.572161 | 6.3:-6553172 | None:intergenic |
| CGAGGTCATCCATAGTAGAT+GGG | 0.575820 | 6.3:+6552857 | MS.gene20445:CDS |
| GAGGGTTATCGTATTGCTGG+TGG | 0.577740 | 6.3:+6553080 | MS.gene20445:CDS |
| CCATACCATGGGCTTCCAGA+AGG | 0.582962 | 6.3:-6552696 | None:intergenic |
| TAGCAAGGATGCTTTGTGCA+TGG | 0.585942 | 6.3:-6553022 | None:intergenic |
| CACGGTCTGGACCATACCAT+GGG | 0.588277 | 6.3:-6552707 | None:intergenic |
| TGGTGGACCTCTCGGTGAGG+TGG | 0.589632 | 6.3:+6553097 | MS.gene20445:CDS |
| CCAGACCGTGTCAAGTACTT+GGG | 0.589728 | 6.3:+6552720 | MS.gene20445:CDS |
| CCCAGTTAACAACAATGCAT+GGG | 0.594599 | 6.3:+6553310 | MS.gene20445:CDS |
| ATGGATCAAAGCTTCCTCCT+GGG | 0.598932 | 6.3:-6553133 | None:intergenic |
| CTTGGCAAGCCCAAATAGCA+AGG | 0.601875 | 6.3:-6553037 | None:intergenic |
| CATACCATGGGCTTCCAGAA+GGG | 0.602558 | 6.3:-6552695 | None:intergenic |
| CATTGCGAGCCAAGAGCTCG+GGG | 0.614226 | 6.3:-6552908 | None:intergenic |
| TGTTAACTGGGTCCGCAAGG+TGG | 0.616453 | 6.3:-6553298 | None:intergenic |
| TTTGTGCATGGACTAGACTT+GGG | 0.616758 | 6.3:-6553010 | None:intergenic |
| AGGATCTCAAATCTTTAGTG+AGG | 0.620360 | 6.3:+6552965 | MS.gene20445:CDS |
| GAGGGTGGGCTTGACTACTT+GGG | 0.623436 | 6.3:+6552984 | MS.gene20445:CDS |
| AAGCCTCTGGGTCGTCAGCG+AGG | 0.627327 | 6.3:-6553160 | None:intergenic |
| GTATCCCAACCATAGTCACC+AGG | 0.627588 | 6.3:-6552786 | None:intergenic |
| TCAAATTCGGTGAGGCCGTG+TGG | 0.635138 | 6.3:+6552934 | MS.gene20445:CDS |
| ACGTCCCTTCTGGAAGCCCA+TGG | 0.638490 | 6.3:+6552691 | MS.gene20445:CDS |
| GGATCTCAAATCTTTAGTGA+GGG | 0.655185 | 6.3:+6552966 | MS.gene20445:CDS |
| TGCTGGTGGACCTCTCGGTG+AGG | 0.655216 | 6.3:+6553094 | MS.gene20445:CDS |
| TTCCACCCAAGACTTTGGAG+TGG | 0.655299 | 6.3:+6552632 | MS.gene20445:CDS |
| CTCGGGGAAGACACATCCCA+AGG | 0.667407 | 6.3:-6552892 | None:intergenic |
| GAATCTTGCTGACCACCTTG+CGG | 0.669848 | 6.3:+6553286 | MS.gene20445:CDS |
| GTGGTCGACCCACTCTACCC+AGG | 0.672866 | 6.3:+6553116 | MS.gene20445:CDS |
| AGATCCTGCCTTGAACCACA+CGG | 0.672978 | 6.3:-6552949 | None:intergenic |
| GGGTCGACCACCTCACCGAG+AGG | 0.690074 | 6.3:-6553104 | None:intergenic |
| AGGCCTCGCTGACGACCCAG+AGG | 0.694133 | 6.3:+6553157 | MS.gene20445:CDS |
| CAATGGTGTCAAATTCGGTG+AGG | 0.696354 | 6.3:+6552926 | MS.gene20445:CDS |
| ATGGACCCAAGTACTTGACA+CGG | 0.711188 | 6.3:-6552725 | None:intergenic |
| GTCGACCCACTCTACCCAGG+AGG | 0.724884 | 6.3:+6553119 | MS.gene20445:CDS |
| GAGTGGGAAGAATCTCCATG+AGG | 0.760427 | 6.3:+6552649 | MS.gene20445:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAGGTGAAAGAACTCAAAAA+TGG | + | chr6.3:6553194-6553213 | MS.gene20445:CDS | 30.0% | |
| TTGTTCAAGCTATTGTTACT+GGG | + | chr6.3:6553249-6553268 | MS.gene20445:CDS | 30.0% | |
| TTTGTTCAAGCTATTGTTAC+TGG | + | chr6.3:6553248-6553267 | MS.gene20445:CDS | 30.0% | |
| ! | CTAGCTATGTTTTCTATGTT+TGG | + | chr6.3:6553221-6553240 | MS.gene20445:CDS | 30.0% |
| AATTCACCAGTGAGATAAGA+TGG | - | chr6.3:6552765-6552784 | None:intergenic | 35.0% | |
| AGGATCTCAAATCTTTAGTG+AGG | + | chr6.3:6552965-6552984 | MS.gene20445:CDS | 35.0% | |
| GCTTGCCAAGTTATCTTAAT+GGG | + | chr6.3:6553050-6553069 | MS.gene20445:CDS | 35.0% | |
| GGATCTCAAATCTTTAGTGA+GGG | + | chr6.3:6552966-6552985 | MS.gene20445:CDS | 35.0% | |
| ! | TCTCTTCTTCATCATTGGTT+GGG | + | chr6.3:6552589-6552608 | MS.gene20445:CDS | 35.0% |
| !! | ACAAAGCATCCTTGCTATTT+GGG | + | chr6.3:6553028-6553047 | MS.gene20445:CDS | 35.0% |
| AATTTCCTGGTGACTATGGT+TGG | + | chr6.3:6552781-6552800 | MS.gene20445:CDS | 40.0% | |
| ACCCAGTTAACAACAATGCA+TGG | + | chr6.3:6553309-6553328 | MS.gene20445:CDS | 40.0% | |
| ATTTCCTGGTGACTATGGTT+GGG | + | chr6.3:6552782-6552801 | MS.gene20445:CDS | 40.0% | |
| CAAGCTATTGTTACTGGGAA+AGG | + | chr6.3:6553254-6553273 | MS.gene20445:CDS | 40.0% | |
| CAGCTCCCATTAAGATAACT+TGG | - | chr6.3:6553058-6553077 | None:intergenic | 40.0% | |
| CCCAGTTAACAACAATGCAT+GGG | + | chr6.3:6553310-6553329 | MS.gene20445:CDS | 40.0% | |
| CTCAAATCTTTAGTGAGGGT+GGG | + | chr6.3:6552970-6552989 | MS.gene20445:CDS | 40.0% | |
| CTCTCTTCTTCATCATTGGT+TGG | + | chr6.3:6552588-6552607 | MS.gene20445:CDS | 40.0% | |
| GGCTTGCCAAGTTATCTTAA+TGG | + | chr6.3:6553049-6553068 | MS.gene20445:CDS | 40.0% | |
| GTCTCTCTCTTCTTCATCAT+TGG | + | chr6.3:6552584-6552603 | MS.gene20445:CDS | 40.0% | |
| TATCTCACTGGTGAATTTCC+TGG | + | chr6.3:6552768-6552787 | MS.gene20445:CDS | 40.0% | |
| TCTCAAATCTTTAGTGAGGG+TGG | + | chr6.3:6552969-6552988 | MS.gene20445:CDS | 40.0% | |
| TGGTCAGCAAGATTCTCTAT+AGG | - | chr6.3:6553281-6553300 | None:intergenic | 40.0% | |
| ! | CCCATGCATTGTTGTTAACT+GGG | - | chr6.3:6553313-6553332 | None:intergenic | 40.0% |
| !! | CACAAAGCATCCTTGCTATT+TGG | + | chr6.3:6553027-6553046 | MS.gene20445:CDS | 40.0% |
| !! | CATAGTAGATGGGCTATGTT+GGG | + | chr6.3:6552867-6552886 | MS.gene20445:CDS | 40.0% |
| !! | GAGTTCACGGTTTTTAGAGA+AGG | - | chr6.3:6552838-6552857 | None:intergenic | 40.0% |
| !! | TTTGTGCATGGACTAGACTT+GGG | - | chr6.3:6553013-6553032 | None:intergenic | 40.0% |
| AAGTACTTGGGTCCATTCTC+TGG | + | chr6.3:6552732-6552751 | MS.gene20445:CDS | 45.0% | |
| AATGGATCAAAGCTTCCTCC+TGG | - | chr6.3:6553137-6553156 | None:intergenic | 45.0% | |
| ATCTTAATGGGAGCTGTCGA+GGG | + | chr6.3:6553062-6553081 | MS.gene20445:CDS | 45.0% | |
| ATGGACCCAAGTACTTGACA+CGG | - | chr6.3:6552728-6552747 | None:intergenic | 45.0% | |
| ATGGATCAAAGCTTCCTCCT+GGG | - | chr6.3:6553136-6553155 | None:intergenic | 45.0% | |
| CCAACATAGCCCATCTACTA+TGG | - | chr6.3:6552869-6552888 | None:intergenic | 45.0% | |
| CGAGGTCATCCATAGTAGAT+GGG | + | chr6.3:6552857-6552876 | MS.gene20445:CDS | 45.0% | |
| GAAGCTCCATCTTATCTCAC+TGG | + | chr6.3:6552756-6552775 | MS.gene20445:CDS | 45.0% | |
| GGTGAATTTCCTGGTGACTA+TGG | + | chr6.3:6552777-6552796 | MS.gene20445:CDS | 45.0% | |
| TAGCAAGGATGCTTTGTGCA+TGG | - | chr6.3:6553025-6553044 | None:intergenic | 45.0% | |
| TATCTTAATGGGAGCTGTCG+AGG | + | chr6.3:6553061-6553080 | MS.gene20445:CDS | 45.0% | |
| TATGGATGACCTCGAGTTCA+CGG | - | chr6.3:6552851-6552870 | None:intergenic | 45.0% | |
| TCAACTCTGCAAAAGCCTCT+GGG | - | chr6.3:6553175-6553194 | None:intergenic | 45.0% | |
| TCGAGGTCATCCATAGTAGA+TGG | + | chr6.3:6552856-6552875 | MS.gene20445:CDS | 45.0% | |
| TCTTCCCACTCCAAAGTCTT+GGG | - | chr6.3:6552640-6552659 | None:intergenic | 45.0% | |
| TTCAACTCTGCAAAAGCCTC+TGG | - | chr6.3:6553176-6553195 | None:intergenic | 45.0% | |
| TTCTTCCCACTCCAAAGTCT+TGG | - | chr6.3:6552641-6552660 | None:intergenic | 45.0% | |
| ! | AGAGGCTTTTGCAGAGTTGA+AGG | + | chr6.3:6553175-6553194 | MS.gene20445:CDS | 45.0% |
| ! | CAATGGTGTCAAATTCGGTG+AGG | + | chr6.3:6552926-6552945 | MS.gene20445:CDS | 45.0% |
| ! | CTCTAAAAACCGTGAACTCG+AGG | + | chr6.3:6552839-6552858 | MS.gene20445:CDS | 45.0% |
| ! | GCCCATGCATTGTTGTTAAC+TGG | - | chr6.3:6553314-6553333 | None:intergenic | 45.0% |
| ! | GCTCGCAATGGTGTCAAATT+CGG | + | chr6.3:6552921-6552940 | MS.gene20445:CDS | 45.0% |
| ! | GGAGGAAGCTTTGATCCATT+AGG | + | chr6.3:6553137-6553156 | MS.gene20445:CDS | 45.0% |
| ! | TTCTTCATCATTGGTTGGGC+AGG | + | chr6.3:6552593-6552612 | MS.gene20445:CDS | 45.0% |
| !! | CCATAGTAGATGGGCTATGT+TGG | + | chr6.3:6552866-6552885 | MS.gene20445:CDS | 45.0% |
| !! | CGGTTTTTAGAGAAGGTCTC+TGG | - | chr6.3:6552831-6552850 | None:intergenic | 45.0% |
| !! | CTTGGTGGTTGTTTTCCTCA+TGG | - | chr6.3:6552667-6552686 | None:intergenic | 45.0% |
| !! | CTTTGTGCATGGACTAGACT+TGG | - | chr6.3:6553014-6553033 | None:intergenic | 45.0% |
| ACCAAGAAGAACGTCCCTTC+TGG | + | chr6.3:6552681-6552700 | MS.gene20445:CDS | 50.0% | |
| ACTCCAAAGTCTTGGGTGGA+AGG | - | chr6.3:6552633-6552652 | None:intergenic | 50.0% | |
| AGAAGGGACGTTCTTCTTGG+TGG | - | chr6.3:6552682-6552701 | None:intergenic | 50.0% | |
| AGATCCTGCCTTGAACCACA+CGG | - | chr6.3:6552952-6552971 | None:intergenic | 50.0% | |
| AGGGGCAAAGTTTGTGGCAT+AGG | - | chr6.3:6553336-6553355 | None:intergenic | 50.0% | |
| CATACCATGGGCTTCCAGAA+GGG | - | chr6.3:6552698-6552717 | None:intergenic | 50.0% | |
| CCAGACCGTGTCAAGTACTT+GGG | + | chr6.3:6552720-6552739 | MS.gene20445:CDS | 50.0% | |
| CTCCAAAGTCTTGGGTGGAA+GGG | - | chr6.3:6552632-6552651 | None:intergenic | 50.0% | |
| CTTGGCAAGCCCAAATAGCA+AGG | - | chr6.3:6553040-6553059 | None:intergenic | 50.0% | |
| CTTTCCAGGGGCAAAGTTTG+TGG | - | chr6.3:6553342-6553361 | None:intergenic | 50.0% | |
| GAATCTTGCTGACCACCTTG+CGG | + | chr6.3:6553286-6553305 | MS.gene20445:CDS | 50.0% | |
| GACTATGGTTGGGATACTGC+TGG | + | chr6.3:6552792-6552811 | MS.gene20445:CDS | 50.0% | |
| GAGGGTTATCGTATTGCTGG+TGG | + | chr6.3:6553080-6553099 | MS.gene20445:CDS | 50.0% | |
| GAGTGGGAAGAATCTCCATG+AGG | + | chr6.3:6552649-6552668 | MS.gene20445:CDS | 50.0% | |
| GATGGAGCTTCACCAGAGAA+TGG | - | chr6.3:6552747-6552766 | None:intergenic | 50.0% | |
| GTATCCCAACCATAGTCACC+AGG | - | chr6.3:6552789-6552808 | None:intergenic | 50.0% | |
| GTCGAGGGTTATCGTATTGC+TGG | + | chr6.3:6553077-6553096 | MS.gene20445:CDS | 50.0% | |
| TATGCCACAAACTTTGCCCC+TGG | + | chr6.3:6553335-6553354 | MS.gene20445:CDS | 50.0% | |
| TCCAAAGTCTTGGGTGGAAG+GGG | - | chr6.3:6552631-6552650 | None:intergenic | 50.0% | |
| TCCAGAAGGGACGTTCTTCT+TGG | - | chr6.3:6552685-6552704 | None:intergenic | 50.0% | |
| TCCAGACCGTGTCAAGTACT+TGG | + | chr6.3:6552719-6552738 | MS.gene20445:CDS | 50.0% | |
| TGTTGTTAACTGGGTCCGCA+AGG | - | chr6.3:6553304-6553323 | None:intergenic | 50.0% | |
| ! | TTCCACCCAAGACTTTGGAG+TGG | + | chr6.3:6552632-6552651 | MS.gene20445:CDS | 50.0% |
| !! | TCCACCCAAGACTTTGGAGT+GGG | + | chr6.3:6552633-6552652 | MS.gene20445:CDS | 50.0% |
| AAGCTTCCTCCTGGGTAGAG+TGG | - | chr6.3:6553128-6553147 | None:intergenic | 55.0% | |
| ACACGGTCTGGACCATACCA+TGG | - | chr6.3:6552711-6552730 | None:intergenic | 55.0% | |
| ACCATTGCGAGCCAAGAGCT+CGG | - | chr6.3:6552913-6552932 | None:intergenic | 55.0% | |
| AGCTTCCTCCTGGGTAGAGT+GGG | - | chr6.3:6553127-6553146 | None:intergenic | 55.0% | |
| ATGTGTCTTCCCCGAGCTCT+TGG | + | chr6.3:6552899-6552918 | MS.gene20445:CDS | 55.0% | |
| CACGGTCTGGACCATACCAT+GGG | - | chr6.3:6552710-6552729 | None:intergenic | 55.0% | |
| CCATACCATGGGCTTCCAGA+AGG | - | chr6.3:6552699-6552718 | None:intergenic | 55.0% | |
| CCCAAGTACTTGACACGGTC+TGG | - | chr6.3:6552723-6552742 | None:intergenic | 55.0% | |
| TCCCACTCCAAAGTCTTGGG+TGG | - | chr6.3:6552637-6552656 | None:intergenic | 55.0% | |
| TCCCCTTCCACCCAAGACTT+TGG | + | chr6.3:6552627-6552646 | MS.gene20445:CDS | 55.0% | |
| TGGGCTATGTTGGGTGCCTT+GGG | + | chr6.3:6552876-6552895 | MS.gene20445:CDS | 55.0% | |
| TGTTAACTGGGTCCGCAAGG+TGG | - | chr6.3:6553301-6553320 | None:intergenic | 55.0% | |
| ! | ATGGGCTATGTTGGGTGCCT+TGG | + | chr6.3:6552875-6552894 | MS.gene20445:CDS | 55.0% |
| ! | CCTTCTGGAAGCCCATGGTA+TGG | + | chr6.3:6552696-6552715 | MS.gene20445:CDS | 55.0% |
| ! | CGTATTGCTGGTGGACCTCT+CGG | + | chr6.3:6553089-6553108 | MS.gene20445:CDS | 55.0% |
| ! | GAGGGTGGGCTTGACTACTT+GGG | + | chr6.3:6552984-6553003 | MS.gene20445:CDS | 55.0% |
| ! | TCAAATTCGGTGAGGCCGTG+TGG | + | chr6.3:6552934-6552953 | MS.gene20445:CDS | 55.0% |
| ! | TGAGGGTGGGCTTGACTACT+TGG | + | chr6.3:6552983-6553002 | MS.gene20445:CDS | 55.0% |
| CATTGCGAGCCAAGAGCTCG+GGG | - | chr6.3:6552911-6552930 | None:intergenic | 60.0% | |
| CCATTGCGAGCCAAGAGCTC+GGG | - | chr6.3:6552912-6552931 | None:intergenic | 60.0% | |
| CTCGGGGAAGACACATCCCA+AGG | - | chr6.3:6552895-6552914 | None:intergenic | 60.0% | |
| ! | ACGTCCCTTCTGGAAGCCCA+TGG | + | chr6.3:6552691-6552710 | MS.gene20445:CDS | 60.0% |
| AAGCCTCTGGGTCGTCAGCG+AGG | - | chr6.3:6553163-6553182 | None:intergenic | 65.0% | |
| CGGTGAGGCCGTGTGGTTCA+AGG | + | chr6.3:6552941-6552960 | MS.gene20445:CDS | 65.0% | |
| GAGGCCGTGTGGTTCAAGGC+AGG | + | chr6.3:6552945-6552964 | MS.gene20445:CDS | 65.0% | |
| GGGTCGTCAGCGAGGCCTAA+TGG | - | chr6.3:6553155-6553174 | None:intergenic | 65.0% | |
| GTCGACCCACTCTACCCAGG+AGG | + | chr6.3:6553119-6553138 | MS.gene20445:CDS | 65.0% | |
| GTGGTCGACCCACTCTACCC+AGG | + | chr6.3:6553116-6553135 | MS.gene20445:CDS | 65.0% | |
| ! | CCCGAGCTCTTGGCTCGCAA+TGG | + | chr6.3:6552909-6552928 | MS.gene20445:CDS | 65.0% |
| ! | TGCTGGTGGACCTCTCGGTG+AGG | + | chr6.3:6553094-6553113 | MS.gene20445:CDS | 65.0% |
| ! | TGGTGGACCTCTCGGTGAGG+TGG | + | chr6.3:6553097-6553116 | MS.gene20445:CDS | 65.0% |
| AGGCCTCGCTGACGACCCAG+AGG | + | chr6.3:6553157-6553176 | MS.gene20445:CDS | 70.0% | |
| GGGTCGACCACCTCACCGAG+AGG | - | chr6.3:6553107-6553126 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 6552567 | 6553364 | 6552567 | ID=MS.gene20445 |
| chr6.3 | mRNA | 6552567 | 6553364 | 6552567 | ID=MS.gene20445.t1;Parent=MS.gene20445 |
| chr6.3 | exon | 6552567 | 6553364 | 6552567 | ID=MS.gene20445.t1.exon1;Parent=MS.gene20445.t1 |
| chr6.3 | CDS | 6552567 | 6553364 | 6552567 | ID=cds.MS.gene20445.t1;Parent=MS.gene20445.t1 |
| Gene Sequence |
| Protein sequence |
