Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22793.t1 | XP_003626195.1 | 98.3 | 640 | 11 | 0 | 1 | 640 | 40 | 679 | 7.60E-191 | 677.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22793.t1 | Q8RWU5 | 34.4 | 163 | 100 | 3 | 10 | 169 | 16 | 174 | 1.2e-14 | 83.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22793.t1 | G7KWK1 | 98.3 | 640 | 11 | 0 | 1 | 640 | 40 | 679 | 5.5e-191 | 677.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene22793 | 0.824262 | 8.88E-54 | -1.69E-46 |
| MS.gene04918 | MS.gene22793 | 0.820751 | 5.81E-53 | -1.69E-46 |
| MS.gene04919 | MS.gene22793 | 0.805014 | 1.64E-49 | -1.69E-46 |
| MS.gene04920 | MS.gene22793 | 0.822298 | 2.55E-53 | -1.69E-46 |
| MS.gene049283 | MS.gene22793 | 0.85401 | 1.64E-61 | -1.69E-46 |
| MS.gene049368 | MS.gene22793 | 0.83979 | 1.28E-57 | -1.69E-46 |
| MS.gene049499 | MS.gene22793 | 0.831559 | 1.56E-55 | -1.69E-46 |
| MS.gene049983 | MS.gene22793 | 0.86978 | 2.39E-66 | -1.69E-46 |
| MS.gene050085 | MS.gene22793 | 0.80938 | 1.95E-50 | -1.69E-46 |
| MS.gene050213 | MS.gene22793 | 0.837848 | 4.08E-57 | -1.69E-46 |
| MS.gene050359 | MS.gene22793 | 0.806515 | 7.93E-50 | -1.69E-46 |
| MS.gene050384 | MS.gene22793 | 0.816723 | 4.77E-52 | -1.69E-46 |
| MS.gene050386 | MS.gene22793 | 0.823261 | 1.52E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene22793 | 0.82276 | 1.99E-53 | -1.69E-46 |
| MS.gene050551 | MS.gene22793 | 0.813144 | 2.97E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene22793 | 0.858633 | 7.20E-63 | -1.69E-46 |
| MS.gene050654 | MS.gene22793 | 0.864503 | 1.16E-64 | -1.69E-46 |
| MS.gene050689 | MS.gene22793 | 0.802253 | 6.12E-49 | -1.69E-46 |
| MS.gene050737 | MS.gene22793 | 0.814931 | 1.20E-51 | -1.69E-46 |
| MS.gene050931 | MS.gene22793 | 0.888239 | 7.04E-73 | -1.69E-46 |
| MS.gene050941 | MS.gene22793 | 0.823195 | 1.58E-53 | -1.69E-46 |
| MS.gene050945 | MS.gene22793 | 0.820091 | 8.24E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene22793 | 0.833062 | 6.62E-56 | -1.69E-46 |
| MS.gene051209 | MS.gene22793 | 0.810403 | 1.17E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene22793 | 0.831212 | 1.90E-55 | -1.69E-46 |
| MS.gene051343 | MS.gene22793 | 0.828266 | 9.89E-55 | -1.69E-46 |
| MS.gene051381 | MS.gene22793 | 0.814116 | 1.82E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene22793 | 0.811664 | 6.25E-51 | -1.69E-46 |
| MS.gene052016 | MS.gene22793 | 0.816079 | 6.65E-52 | -1.69E-46 |
| MS.gene052036 | MS.gene22793 | 0.803673 | 3.12E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene22793 | 0.833415 | 5.40E-56 | -1.69E-46 |
| MS.gene052307 | MS.gene22793 | 0.834011 | 3.83E-56 | -1.69E-46 |
| MS.gene052342 | MS.gene22793 | 0.82686 | 2.15E-54 | -1.69E-46 |
| MS.gene052434 | MS.gene22793 | 0.802513 | 5.41E-49 | -1.69E-46 |
| MS.gene052463 | MS.gene22793 | 0.825231 | 5.25E-54 | -1.69E-46 |
| MS.gene052533 | MS.gene22793 | 0.811784 | 5.89E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene22793 | 0.829272 | 5.65E-55 | -1.69E-46 |
| MS.gene053079 | MS.gene22793 | 0.828338 | 9.51E-55 | -1.69E-46 |
| MS.gene053143 | MS.gene22793 | 0.803963 | 2.71E-49 | -1.69E-46 |
| MS.gene053542 | MS.gene22793 | 0.802718 | 4.91E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene22793 | 0.806953 | 6.40E-50 | -1.69E-46 |
| MS.gene053726 | MS.gene22793 | 0.802465 | 5.54E-49 | -1.69E-46 |
| MS.gene053931 | MS.gene22793 | 0.816958 | 4.23E-52 | -1.69E-46 |
| MS.gene054004 | MS.gene22793 | 0.824945 | 6.13E-54 | -1.69E-46 |
| MS.gene054178 | MS.gene22793 | 0.820339 | 7.23E-53 | -1.69E-46 |
| MS.gene054479 | MS.gene22793 | 0.810663 | 1.03E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene22793 | 0.809078 | 2.26E-50 | -1.69E-46 |
| MS.gene054709 | MS.gene22793 | 0.802069 | 6.68E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene22793 | 0.824746 | 6.83E-54 | -1.69E-46 |
| MS.gene054893 | MS.gene22793 | 0.829275 | 5.64E-55 | -1.69E-46 |
| MS.gene054957 | MS.gene22793 | 0.815088 | 1.11E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene22793 | 0.80557 | 1.25E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene22793 | 0.824122 | 9.58E-54 | -1.69E-46 |
| MS.gene056045 | MS.gene22793 | 0.825131 | 5.54E-54 | -1.69E-46 |
| MS.gene056097 | MS.gene22793 | 0.803195 | 3.91E-49 | -1.69E-46 |
| MS.gene056181 | MS.gene22793 | 0.83356 | 4.97E-56 | -1.69E-46 |
| MS.gene056308 | MS.gene22793 | 0.818561 | 1.84E-52 | -1.69E-46 |
| MS.gene056519 | MS.gene22793 | 0.807767 | 4.30E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene22793 | 0.822104 | 2.83E-53 | -1.69E-46 |
| MS.gene056776 | MS.gene22793 | 0.821154 | 4.70E-53 | -1.69E-46 |
| MS.gene056831 | MS.gene22793 | 0.810642 | 1.04E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene22793 | 0.815908 | 7.26E-52 | -1.69E-46 |
| MS.gene056973 | MS.gene22793 | 0.816294 | 5.96E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene22793 | 0.833782 | 4.38E-56 | -1.69E-46 |
| MS.gene057155 | MS.gene22793 | 0.810399 | 1.18E-50 | -1.69E-46 |
| MS.gene057174 | MS.gene22793 | 0.804723 | 1.88E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene22793 | 0.808485 | 3.03E-50 | -1.69E-46 |
| MS.gene057890 | MS.gene22793 | -0.820295 | 7.40E-53 | -1.69E-46 |
| MS.gene057919 | MS.gene22793 | 0.803684 | 3.10E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene22793 | 0.816192 | 6.28E-52 | -1.69E-46 |
| MS.gene058292 | MS.gene22793 | 0.832448 | 9.40E-56 | -1.69E-46 |
| MS.gene058427 | MS.gene22793 | 0.801405 | 9.14E-49 | -1.69E-46 |
| MS.gene058429 | MS.gene22793 | 0.800105 | 1.68E-48 | -1.69E-46 |
| MS.gene058781 | MS.gene22793 | 0.831853 | 1.32E-55 | -1.69E-46 |
| MS.gene058783 | MS.gene22793 | 0.80713 | 5.88E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene22793 | 0.848109 | 7.56E-60 | -1.69E-46 |
| MS.gene059170 | MS.gene22793 | 0.817405 | 3.35E-52 | -1.69E-46 |
| MS.gene059778 | MS.gene22793 | 0.83541 | 1.71E-56 | -1.69E-46 |
| MS.gene05985 | MS.gene22793 | -0.804093 | 2.55E-49 | -1.69E-46 |
| MS.gene060085 | MS.gene22793 | 0.806518 | 7.91E-50 | -1.69E-46 |
| MS.gene060244 | MS.gene22793 | 0.80898 | 2.37E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene22793 | 0.832076 | 1.16E-55 | -1.69E-46 |
| MS.gene060435 | MS.gene22793 | 0.807709 | 4.43E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene22793 | 0.825141 | 5.51E-54 | -1.69E-46 |
| MS.gene060932 | MS.gene22793 | 0.816695 | 4.84E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene22793 | 0.86565 | 5.06E-65 | -1.69E-46 |
| MS.gene060935 | MS.gene22793 | 0.864277 | 1.36E-64 | -1.69E-46 |
| MS.gene060937 | MS.gene22793 | 0.874558 | 6.15E-68 | -1.69E-46 |
| MS.gene061100 | MS.gene22793 | 0.856819 | 2.49E-62 | -1.69E-46 |
| MS.gene061160 | MS.gene22793 | 0.847999 | 8.10E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene22793 | MS.gene61203 | PPI |
| MS.gene22793 | MS.gene61229 | PPI |
| MS.gene89105 | MS.gene22793 | PPI |
| MS.gene22793 | MS.gene36290 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22793.t1 | MTR_7g112570 | 98.594 | 640 | 9 | 0 | 1 | 640 | 40 | 679 | 0.0 | 1253 |
| MS.gene22793.t1 | MTR_7g112570 | 98.217 | 561 | 10 | 0 | 1 | 561 | 40 | 600 | 0.0 | 1095 |
| MS.gene22793.t1 | MTR_7g112570 | 27.423 | 423 | 249 | 5 | 237 | 605 | 149 | 567 | 1.12e-31 | 130 |
| MS.gene22793.t1 | MTR_7g112570 | 98.039 | 561 | 11 | 0 | 1 | 561 | 40 | 600 | 0.0 | 1094 |
| MS.gene22793.t1 | MTR_7g112570 | 27.423 | 423 | 249 | 5 | 237 | 605 | 149 | 567 | 9.79e-32 | 131 |
| MS.gene22793.t1 | MTR_4g013255 | 40.094 | 641 | 368 | 8 | 7 | 639 | 14 | 646 | 7.17e-135 | 410 |
| MS.gene22793.t1 | MTR_2g021030 | 29.741 | 464 | 319 | 7 | 158 | 616 | 127 | 588 | 2.49e-44 | 167 |
| MS.gene22793.t1 | MTR_2g021030 | 27.800 | 500 | 324 | 8 | 55 | 549 | 132 | 599 | 8.37e-38 | 149 |
| MS.gene22793.t1 | MTR_2g021030 | 24.214 | 318 | 197 | 6 | 35 | 321 | 297 | 601 | 1.96e-11 | 67.4 |
| MS.gene22793.t1 | MTR_1g012520 | 28.884 | 457 | 286 | 15 | 145 | 575 | 163 | 606 | 2.82e-29 | 123 |
| MS.gene22793.t1 | MTR_1g012520 | 27.549 | 461 | 271 | 11 | 53 | 504 | 205 | 611 | 3.94e-25 | 110 |
| MS.gene22793.t1 | MTR_1g012520 | 27.652 | 264 | 178 | 6 | 360 | 614 | 174 | 433 | 1.68e-18 | 90.1 |
| MS.gene22793.t1 | MTR_1g114610 | 25.829 | 422 | 250 | 11 | 10 | 419 | 20 | 390 | 1.25e-28 | 119 |
| MS.gene22793.t1 | MTR_1g114610 | 28.896 | 308 | 184 | 7 | 289 | 563 | 101 | 406 | 7.51e-25 | 107 |
| MS.gene22793.t1 | MTR_1g114610 | 30.396 | 227 | 153 | 4 | 362 | 583 | 95 | 321 | 1.11e-18 | 89.4 |
| MS.gene22793.t1 | MTR_2g021030 | 29.377 | 337 | 209 | 6 | 158 | 491 | 127 | 437 | 3.23e-27 | 115 |
| MS.gene22793.t1 | MTR_2g021030 | 27.928 | 333 | 204 | 7 | 259 | 583 | 126 | 430 | 3.11e-25 | 109 |
| MS.gene22793.t1 | MTR_2g021030 | 27.463 | 335 | 207 | 7 | 55 | 385 | 132 | 434 | 2.65e-20 | 94.7 |
| MS.gene22793.t1 | MTR_4g114640 | 29.279 | 444 | 298 | 12 | 138 | 566 | 144 | 586 | 1.74e-25 | 112 |
| MS.gene22793.t1 | MTR_4g114640 | 30.000 | 260 | 176 | 5 | 360 | 614 | 165 | 423 | 8.74e-18 | 87.8 |
| MS.gene22793.t1 | MTR_4g114640 | 25.641 | 507 | 280 | 16 | 96 | 562 | 182 | 631 | 3.47e-16 | 82.8 |
| MS.gene22793.t1 | MTR_4g114640 | 26.562 | 320 | 203 | 8 | 311 | 624 | 167 | 460 | 5.66e-16 | 82.0 |
| MS.gene22793.t1 | MTR_3g107280 | 26.402 | 428 | 268 | 13 | 151 | 550 | 169 | 577 | 1.88e-24 | 108 |
| MS.gene22793.t1 | MTR_3g107280 | 25.377 | 398 | 230 | 15 | 63 | 424 | 213 | 579 | 4.26e-18 | 88.6 |
| MS.gene22793.t1 | MTR_3g107280 | 24.473 | 237 | 149 | 4 | 360 | 566 | 172 | 408 | 1.60e-15 | 80.5 |
| MS.gene22793.t1 | MTR_3g107280 | 24.267 | 375 | 238 | 11 | 63 | 424 | 265 | 606 | 1.29e-14 | 77.8 |
| MS.gene22793.t1 | MTR_8g028140 | 25.576 | 434 | 216 | 9 | 9 | 420 | 21 | 369 | 2.35e-22 | 100 |
| MS.gene22793.t1 | MTR_8g028140 | 30.928 | 194 | 104 | 4 | 376 | 568 | 71 | 235 | 5.37e-19 | 90.1 |
| MS.gene22793.t1 | MTR_8g028140 | 27.778 | 252 | 156 | 7 | 324 | 550 | 95 | 345 | 2.66e-15 | 78.6 |
| MS.gene22793.t1 | MTR_4g114650 | 27.802 | 464 | 256 | 12 | 166 | 581 | 162 | 594 | 3.90e-22 | 101 |
| MS.gene22793.t1 | MTR_4g114650 | 23.168 | 505 | 312 | 14 | 96 | 581 | 169 | 616 | 7.16e-13 | 72.0 |
| MS.gene22793.t1 | MTR_4g114650 | 27.802 | 464 | 256 | 12 | 166 | 581 | 217 | 649 | 4.92e-22 | 101 |
| MS.gene22793.t1 | MTR_4g114650 | 23.168 | 505 | 312 | 14 | 96 | 581 | 224 | 671 | 8.23e-13 | 72.0 |
| MS.gene22793.t1 | MTR_4g114650 | 27.802 | 464 | 256 | 12 | 166 | 581 | 166 | 598 | 5.21e-22 | 101 |
| MS.gene22793.t1 | MTR_4g114650 | 23.168 | 505 | 312 | 14 | 96 | 581 | 173 | 620 | 8.40e-13 | 72.0 |
| MS.gene22793.t1 | MTR_1g054625 | 33.498 | 203 | 129 | 3 | 354 | 551 | 84 | 285 | 1.69e-20 | 94.0 |
| MS.gene22793.t1 | MTR_1g054625 | 29.907 | 214 | 145 | 3 | 310 | 522 | 121 | 330 | 1.00e-17 | 85.5 |
| MS.gene22793.t1 | MTR_1g054625 | 29.565 | 345 | 191 | 12 | 82 | 414 | 25 | 329 | 1.69e-15 | 79.0 |
| MS.gene22793.t1 | MTR_1g054625 | 25.100 | 251 | 173 | 6 | 59 | 298 | 75 | 321 | 1.46e-12 | 69.7 |
| MS.gene22793.t1 | MTR_4g019320 | 26.241 | 423 | 278 | 12 | 145 | 542 | 105 | 518 | 5.94e-20 | 94.4 |
| MS.gene22793.t1 | MTR_4g019320 | 23.346 | 544 | 293 | 16 | 20 | 491 | 27 | 518 | 4.78e-11 | 66.2 |
| MS.gene22793.t1 | MTR_1g015450 | 26.809 | 470 | 280 | 15 | 103 | 550 | 343 | 770 | 6.51e-20 | 95.1 |
| MS.gene22793.t1 | MTR_1g015480 | 26.626 | 492 | 278 | 15 | 147 | 593 | 180 | 633 | 7.95e-20 | 94.7 |
| MS.gene22793.t1 | MTR_4g133640 | 23.361 | 595 | 361 | 14 | 8 | 560 | 32 | 573 | 9.90e-20 | 94.0 |
| MS.gene22793.t1 | MTR_1g054625 | 34.463 | 177 | 114 | 2 | 376 | 551 | 13 | 188 | 1.04e-19 | 89.7 |
| MS.gene22793.t1 | MTR_1g054625 | 29.907 | 214 | 145 | 3 | 310 | 522 | 24 | 233 | 7.07e-18 | 84.3 |
| MS.gene22793.t1 | MTR_1g054625 | 29.839 | 248 | 139 | 7 | 173 | 414 | 14 | 232 | 1.92e-11 | 65.1 |
| MS.gene22793.t1 | MTR_1g054625 | 26.106 | 226 | 153 | 5 | 84 | 298 | 2 | 224 | 2.23e-11 | 65.1 |
| MS.gene22793.t1 | MTR_8g028140 | 32.934 | 167 | 83 | 3 | 403 | 568 | 17 | 155 | 4.97e-19 | 89.0 |
| MS.gene22793.t1 | MTR_8g028140 | 29.078 | 282 | 169 | 5 | 141 | 420 | 37 | 289 | 1.12e-17 | 84.7 |
| MS.gene22793.t1 | MTR_8g028140 | 27.778 | 252 | 156 | 7 | 324 | 550 | 15 | 265 | 1.03e-15 | 79.0 |
| MS.gene22793.t1 | MTR_8g028140 | 26.441 | 295 | 177 | 8 | 58 | 322 | 10 | 294 | 2.00e-15 | 78.2 |
| MS.gene22793.t1 | MTR_1g029500 | 28.968 | 252 | 138 | 5 | 289 | 528 | 84 | 306 | 3.42e-18 | 87.0 |
| MS.gene22793.t1 | MTR_1g029500 | 24.865 | 370 | 186 | 13 | 110 | 449 | 29 | 336 | 1.07e-13 | 73.6 |
| MS.gene22793.t1 | MTR_4g006450 | 26.923 | 520 | 294 | 22 | 27 | 492 | 33 | 520 | 1.05e-17 | 87.4 |
| MS.gene22793.t1 | MTR_2g007590 | 23.052 | 616 | 368 | 15 | 8 | 575 | 32 | 589 | 1.23e-17 | 87.0 |
| MS.gene22793.t1 | MTR_6g016905 | 22.744 | 554 | 371 | 14 | 28 | 569 | 36 | 544 | 1.83e-17 | 86.7 |
| MS.gene22793.t1 | MTR_3g088895 | 34.437 | 151 | 97 | 2 | 348 | 496 | 127 | 277 | 2.27e-17 | 84.7 |
| MS.gene22793.t1 | MTR_3g088895 | 34.731 | 167 | 106 | 3 | 364 | 527 | 117 | 283 | 3.84e-13 | 72.0 |
| MS.gene22793.t1 | MTR_3g088895 | 25.723 | 311 | 172 | 11 | 173 | 450 | 77 | 361 | 6.82e-13 | 71.2 |
| MS.gene22793.t1 | MTR_3g074570 | 25.405 | 370 | 222 | 11 | 225 | 565 | 72 | 416 | 7.52e-17 | 84.0 |
| MS.gene22793.t1 | MTR_3g465770 | 22.917 | 576 | 371 | 17 | 19 | 577 | 33 | 552 | 1.37e-16 | 84.0 |
| MS.gene22793.t1 | MTR_5g075860 | 23.152 | 514 | 310 | 17 | 31 | 476 | 39 | 535 | 8.67e-16 | 81.3 |
| MS.gene22793.t1 | MTR_8g045150 | 24.625 | 333 | 198 | 6 | 232 | 512 | 119 | 450 | 1.97e-15 | 79.7 |
| MS.gene22793.t1 | MTR_4g094932 | 26.330 | 376 | 210 | 12 | 140 | 482 | 110 | 451 | 1.68e-14 | 77.0 |
| MS.gene22793.t1 | MTR_4g094932 | 28.125 | 320 | 214 | 12 | 234 | 542 | 120 | 434 | 2.43e-11 | 67.0 |
| MS.gene22793.t1 | MTR_6g016725 | 23.134 | 536 | 339 | 18 | 31 | 531 | 99 | 596 | 2.36e-14 | 76.6 |
| MS.gene22793.t1 | MTR_5g095830 | 24.879 | 414 | 260 | 11 | 191 | 560 | 177 | 583 | 3.06e-14 | 76.6 |
| MS.gene22793.t1 | MTR_5g095830 | 24.118 | 510 | 304 | 19 | 27 | 465 | 68 | 565 | 2.92e-13 | 73.6 |
| MS.gene22793.t1 | MTR_8g098695 | 23.333 | 600 | 358 | 22 | 12 | 582 | 9 | 535 | 9.98e-14 | 74.7 |
| MS.gene22793.t1 | MTR_8g017160 | 22.645 | 552 | 340 | 13 | 27 | 503 | 54 | 593 | 1.23e-13 | 74.3 |
| MS.gene22793.t1 | MTR_8g017160 | 23.126 | 467 | 328 | 10 | 122 | 565 | 94 | 552 | 4.01e-13 | 72.8 |
| MS.gene22793.t1 | MTR_8g037780 | 23.023 | 569 | 344 | 17 | 15 | 503 | 33 | 587 | 3.34e-13 | 73.2 |
| MS.gene22793.t1 | MTR_7g083610 | 22.204 | 599 | 367 | 19 | 9 | 582 | 3 | 527 | 5.11e-13 | 72.4 |
| MS.gene22793.t1 | MTR_4g091290 | 24.905 | 526 | 309 | 22 | 10 | 479 | 26 | 521 | 7.14e-13 | 72.0 |
| MS.gene22793.t1 | MTR_3g006050 | 23.056 | 360 | 243 | 6 | 234 | 560 | 218 | 576 | 7.57e-13 | 72.0 |
| MS.gene22793.t1 | MTR_3g110740 | 23.168 | 423 | 251 | 11 | 146 | 499 | 136 | 553 | 7.86e-13 | 72.0 |
| MS.gene22793.t1 | MTR_4g009030 | 23.818 | 571 | 322 | 15 | 25 | 544 | 23 | 531 | 8.63e-13 | 71.6 |
| MS.gene22793.t1 | MTR_4g006240 | 23.614 | 559 | 352 | 15 | 27 | 566 | 30 | 532 | 1.92e-12 | 70.5 |
| MS.gene22793.t1 | MTR_4g021765 | 24.516 | 310 | 183 | 6 | 218 | 500 | 45 | 330 | 1.04e-11 | 67.0 |
| MS.gene22793.t1 | MTR_4g024200 | 23.810 | 462 | 269 | 15 | 27 | 468 | 38 | 436 | 2.21e-11 | 67.0 |
| MS.gene22793.t1 | MTR_1g050478 | 25.685 | 292 | 204 | 6 | 219 | 499 | 197 | 486 | 3.48e-11 | 66.6 |
| MS.gene22793.t1 | MTR_1g114010 | 26.346 | 353 | 193 | 11 | 234 | 565 | 150 | 456 | 3.48e-11 | 66.6 |
| MS.gene22793.t1 | MTR_7g029535 | 22.180 | 523 | 327 | 19 | 27 | 499 | 95 | 587 | 3.87e-11 | 66.6 |
| MS.gene22793.t1 | MTR_1g114010 | 26.062 | 353 | 194 | 11 | 234 | 565 | 80 | 386 | 4.10e-11 | 66.2 |
| MS.gene22793.t1 | MTR_3g083280 | 23.596 | 445 | 279 | 14 | 55 | 492 | 82 | 472 | 4.38e-11 | 66.2 |
| MS.gene22793.t1 | MTR_1g114010 | 26.062 | 353 | 194 | 11 | 234 | 565 | 71 | 377 | 4.45e-11 | 65.9 |
| MS.gene22793.t1 | MTR_1g114010 | 26.062 | 353 | 194 | 11 | 234 | 565 | 231 | 537 | 5.74e-11 | 65.9 |
| MS.gene22793.t1 | MTR_4g435338 | 26.705 | 176 | 106 | 2 | 351 | 503 | 144 | 319 | 9.60e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22793.t1 | AT5G27920 | 57.344 | 640 | 270 | 3 | 3 | 640 | 4 | 642 | 0.0 | 656 |
| MS.gene22793.t1 | AT5G01720 | 40.345 | 637 | 369 | 7 | 7 | 639 | 13 | 642 | 4.96e-123 | 379 |
| MS.gene22793.t1 | AT4G15475 | 29.399 | 466 | 318 | 8 | 158 | 616 | 127 | 588 | 1.41e-43 | 166 |
| MS.gene22793.t1 | AT4G15475 | 26.923 | 598 | 380 | 13 | 10 | 554 | 11 | 604 | 6.09e-40 | 155 |
| MS.gene22793.t1 | AT4G15475 | 25.436 | 401 | 218 | 7 | 272 | 593 | 116 | 514 | 3.93e-23 | 104 |
| MS.gene22793.t1 | AT5G23340 | 27.273 | 429 | 244 | 12 | 10 | 427 | 10 | 381 | 4.10e-28 | 117 |
| MS.gene22793.t1 | AT5G23340 | 29.104 | 268 | 157 | 7 | 289 | 551 | 91 | 330 | 4.73e-19 | 90.5 |
| MS.gene22793.t1 | AT5G23340 | 29.596 | 223 | 152 | 5 | 388 | 605 | 85 | 307 | 2.34e-16 | 82.0 |
| MS.gene22793.t1 | AT5G23340 | 34.132 | 167 | 102 | 3 | 393 | 551 | 58 | 224 | 1.21e-14 | 77.0 |
| MS.gene22793.t1 | AT2G25490 | 27.962 | 422 | 248 | 11 | 158 | 560 | 190 | 574 | 5.62e-28 | 119 |
| MS.gene22793.t1 | AT2G25490 | 29.658 | 263 | 176 | 6 | 292 | 547 | 145 | 405 | 1.07e-20 | 97.1 |
| MS.gene22793.t1 | AT2G25490 | 26.521 | 411 | 259 | 12 | 96 | 467 | 205 | 611 | 8.73e-20 | 94.0 |
| MS.gene22793.t1 | AT2G25490 | 27.715 | 267 | 162 | 5 | 379 | 614 | 155 | 421 | 1.47e-17 | 87.0 |
| MS.gene22793.t1 | AT2G25490 | 25.176 | 425 | 204 | 10 | 111 | 422 | 194 | 617 | 3.19e-14 | 76.6 |
| MS.gene22793.t1 | AT5G25350 | 28.082 | 438 | 278 | 12 | 158 | 583 | 154 | 566 | 2.03e-26 | 114 |
| MS.gene22793.t1 | AT5G25350 | 24.724 | 453 | 272 | 12 | 65 | 504 | 195 | 591 | 3.42e-22 | 101 |
| MS.gene22793.t1 | AT5G25350 | 26.426 | 333 | 197 | 8 | 306 | 621 | 117 | 418 | 2.03e-15 | 80.1 |
| MS.gene22793.t1 | AT5G25350 | 24.941 | 425 | 252 | 11 | 53 | 465 | 235 | 604 | 1.68e-13 | 74.3 |
| MS.gene22793.t1 | AT3G58530 | 34.715 | 193 | 124 | 2 | 310 | 501 | 123 | 314 | 3.75e-21 | 95.9 |
| MS.gene22793.t1 | AT3G58530 | 29.064 | 203 | 138 | 3 | 354 | 551 | 86 | 287 | 3.04e-16 | 81.3 |
| MS.gene22793.t1 | AT3G58530 | 26.022 | 269 | 148 | 6 | 147 | 414 | 113 | 331 | 9.62e-16 | 79.7 |
| MS.gene22793.t1 | AT3G58530 | 28.099 | 242 | 166 | 5 | 219 | 455 | 109 | 347 | 3.09e-11 | 65.9 |
| MS.gene22793.t1 | AT1G77000 | 31.429 | 210 | 117 | 3 | 303 | 510 | 96 | 280 | 5.14e-19 | 89.7 |
| MS.gene22793.t1 | AT1G77000 | 30.178 | 169 | 115 | 2 | 234 | 399 | 104 | 272 | 3.38e-15 | 78.2 |
| MS.gene22793.t1 | AT1G77000 | 33.333 | 156 | 101 | 3 | 423 | 575 | 114 | 269 | 4.73e-12 | 68.6 |
| MS.gene22793.t1 | AT1G77000 | 31.429 | 210 | 117 | 3 | 303 | 510 | 96 | 280 | 5.14e-19 | 89.7 |
| MS.gene22793.t1 | AT1G77000 | 30.178 | 169 | 115 | 2 | 234 | 399 | 104 | 272 | 3.38e-15 | 78.2 |
| MS.gene22793.t1 | AT1G77000 | 33.333 | 156 | 101 | 3 | 423 | 575 | 114 | 269 | 4.73e-12 | 68.6 |
| MS.gene22793.t1 | AT1G21410 | 31.683 | 202 | 111 | 3 | 304 | 503 | 97 | 273 | 2.20e-18 | 87.8 |
| MS.gene22793.t1 | AT1G21410 | 32.584 | 178 | 115 | 5 | 403 | 575 | 92 | 269 | 1.17e-13 | 73.6 |
| MS.gene22793.t1 | AT1G21410 | 25.862 | 232 | 118 | 6 | 172 | 399 | 91 | 272 | 4.94e-12 | 68.6 |
| MS.gene22793.t1 | AT1G21410 | 24.615 | 260 | 156 | 7 | 54 | 284 | 81 | 329 | 1.52e-11 | 67.0 |
| MS.gene22793.t1 | AT1G21410 | 31.683 | 202 | 111 | 3 | 304 | 503 | 97 | 273 | 2.20e-18 | 87.8 |
| MS.gene22793.t1 | AT1G21410 | 32.584 | 178 | 115 | 5 | 403 | 575 | 92 | 269 | 1.17e-13 | 73.6 |
| MS.gene22793.t1 | AT1G21410 | 25.862 | 232 | 118 | 6 | 172 | 399 | 91 | 272 | 4.94e-12 | 68.6 |
| MS.gene22793.t1 | AT1G21410 | 24.615 | 260 | 156 | 7 | 54 | 284 | 81 | 329 | 1.52e-11 | 67.0 |
| MS.gene22793.t1 | AT4G33210 | 25.714 | 490 | 290 | 20 | 103 | 564 | 352 | 795 | 8.60e-18 | 88.2 |
| MS.gene22793.t1 | AT4G33210 | 25.705 | 319 | 203 | 10 | 245 | 545 | 265 | 567 | 4.73e-12 | 69.7 |
| MS.gene22793.t1 | AT1G80630 | 25.053 | 475 | 296 | 11 | 122 | 578 | 90 | 522 | 1.53e-17 | 87.0 |
| MS.gene22793.t1 | AT1G47056 | 24.784 | 347 | 219 | 11 | 154 | 491 | 113 | 426 | 4.69e-17 | 85.1 |
| MS.gene22793.t1 | AT4G07400 | 27.762 | 353 | 208 | 12 | 154 | 495 | 147 | 463 | 4.76e-16 | 82.0 |
| MS.gene22793.t1 | AT1G77000 | 38.931 | 131 | 78 | 2 | 364 | 492 | 106 | 236 | 4.40e-15 | 76.3 |
| MS.gene22793.t1 | AT1G77000 | 31.515 | 165 | 86 | 3 | 303 | 465 | 96 | 235 | 6.81e-12 | 66.6 |
| MS.gene22793.t1 | AT1G77000 | 38.931 | 131 | 78 | 2 | 364 | 492 | 106 | 236 | 4.40e-15 | 76.3 |
| MS.gene22793.t1 | AT1G77000 | 31.515 | 165 | 86 | 3 | 303 | 465 | 96 | 235 | 6.81e-12 | 66.6 |
| MS.gene22793.t1 | AT5G67250 | 25.982 | 331 | 208 | 7 | 154 | 477 | 116 | 416 | 8.90e-15 | 77.8 |
| MS.gene22793.t1 | AT3G07550 | 29.046 | 241 | 139 | 6 | 351 | 563 | 92 | 328 | 2.20e-14 | 75.9 |
| MS.gene22793.t1 | AT3G07550 | 22.523 | 333 | 165 | 7 | 4 | 283 | 12 | 304 | 9.57e-12 | 67.4 |
| MS.gene22793.t1 | AT3G07550 | 28.622 | 283 | 167 | 9 | 311 | 563 | 78 | 355 | 2.24e-14 | 75.9 |
| MS.gene22793.t1 | AT3G07550 | 28.622 | 283 | 167 | 9 | 311 | 563 | 78 | 355 | 2.24e-14 | 75.9 |
| MS.gene22793.t1 | AT1G55590 | 26.446 | 242 | 163 | 6 | 337 | 565 | 298 | 537 | 1.65e-13 | 74.3 |
| MS.gene22793.t1 | AT1G55590 | 28.512 | 242 | 156 | 7 | 273 | 500 | 311 | 549 | 2.62e-13 | 73.6 |
| MS.gene22793.t1 | AT1G80570 | 24.031 | 516 | 296 | 18 | 9 | 496 | 3 | 450 | 3.24e-13 | 72.8 |
| MS.gene22793.t1 | AT1G80570 | 25.676 | 370 | 206 | 8 | 308 | 611 | 81 | 447 | 1.33e-12 | 70.9 |
| MS.gene22793.t1 | AT1G80570 | 25.362 | 414 | 246 | 13 | 158 | 551 | 84 | 454 | 2.72e-11 | 66.6 |
| MS.gene22793.t1 | AT1G80570 | 24.031 | 516 | 296 | 18 | 9 | 496 | 3 | 450 | 3.24e-13 | 72.8 |
| MS.gene22793.t1 | AT1G80570 | 25.676 | 370 | 206 | 8 | 308 | 611 | 81 | 447 | 1.33e-12 | 70.9 |
| MS.gene22793.t1 | AT1G80570 | 25.362 | 414 | 246 | 13 | 158 | 551 | 84 | 454 | 2.72e-11 | 66.6 |
| MS.gene22793.t1 | AT1G80570 | 24.031 | 516 | 296 | 18 | 9 | 496 | 16 | 463 | 3.93e-13 | 72.4 |
| MS.gene22793.t1 | AT1G80570 | 25.676 | 370 | 206 | 8 | 308 | 611 | 94 | 460 | 1.49e-12 | 70.9 |
| MS.gene22793.t1 | AT1G80570 | 25.362 | 414 | 246 | 13 | 158 | 551 | 97 | 467 | 3.41e-11 | 66.6 |
| MS.gene22793.t1 | AT3G62980 | 22.679 | 560 | 302 | 21 | 10 | 489 | 9 | 517 | 3.19e-12 | 70.1 |
| MS.gene22793.t1 | AT2G17020 | 27.052 | 329 | 185 | 12 | 234 | 551 | 72 | 356 | 3.40e-12 | 69.7 |
| MS.gene22793.t1 | AT2G17020 | 27.052 | 329 | 185 | 12 | 234 | 551 | 213 | 497 | 4.20e-12 | 69.7 |
| MS.gene22793.t1 | AT2G17020 | 27.052 | 329 | 185 | 12 | 234 | 551 | 246 | 530 | 1.38e-11 | 68.2 |
| MS.gene22793.t1 | AT3G50080 | 24.927 | 341 | 225 | 9 | 154 | 492 | 114 | 425 | 3.20e-11 | 66.6 |
| MS.gene22793.t1 | AT5G07670 | 26.996 | 263 | 172 | 6 | 291 | 545 | 180 | 430 | 8.03e-11 | 65.1 |
Find 143 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGTCAAGTTCGGTCAATTT+TGG | 0.193845 | 7.3:+4101508 | None:intergenic |
| TGTTTAGGAGTTACTGATAT+TGG | 0.241724 | 7.3:-4103242 | MS.gene22793:CDS |
| GTTTCCCATTGTTGGGGTTT+TGG | 0.243732 | 7.3:-4103326 | MS.gene22793:CDS |
| TTGGTTTAAGCAAATGTATT+GGG | 0.257235 | 7.3:-4101979 | MS.gene22793:CDS |
| GGATTTACTTATCAGAGTTT+TGG | 0.273142 | 7.3:-4103669 | MS.gene22793:CDS |
| TCCGACCACAACAAGATATA+AGG | 0.274694 | 7.3:+4099920 | None:intergenic |
| ATTAATATTGATAAGTGTTT+AGG | 0.282985 | 7.3:-4103257 | MS.gene22793:CDS |
| TTGCATCCTGGAGGCGCTTC+AGG | 0.298755 | 7.3:+4099989 | None:intergenic |
| AATTGACGGTGTTCGAGTTT+CGG | 0.311508 | 7.3:-4102050 | MS.gene22793:CDS |
| TGACCTTGCACCCTCGTTCA+TGG | 0.325451 | 7.3:+4099833 | None:intergenic |
| CTGAGTCGAGTTACCGGGTT+AGG | 0.331335 | 7.3:-4103404 | MS.gene22793:CDS |
| GGGTTGCAGTTTCTTGAAAA+AGG | 0.333034 | 7.3:-4102488 | MS.gene22793:CDS |
| CGGTTGATGTTTCCCATTGT+TGG | 0.333947 | 7.3:-4103334 | MS.gene22793:CDS |
| AACTTCAGACTTGCAAGGTT+TGG | 0.334817 | 7.3:+4101842 | None:intergenic |
| GGTTGATGTTTCCCATTGTT+GGG | 0.335725 | 7.3:-4103333 | MS.gene22793:CDS |
| GTTTAGGAGTTACTGATATT+GGG | 0.356827 | 7.3:-4103241 | MS.gene22793:CDS |
| AAACTTGTAAGATTGAAGTT+AGG | 0.368296 | 7.3:-4101583 | MS.gene22793:CDS |
| CCCTTATATCTTGTTGTGGT+CGG | 0.373630 | 7.3:-4099921 | MS.gene22793:CDS |
| GTTTGGAGATTTCTGATCTT+GGG | 0.385615 | 7.3:-4103163 | MS.gene22793:CDS |
| TGTGATATGGTTACTGAGAT+TGG | 0.386765 | 7.3:-4101812 | MS.gene22793:CDS |
| TGCAGTCAGTTGCAAGAGAT+TGG | 0.388377 | 7.3:-4101187 | MS.gene22793:CDS |
| GTTGAGTTTGAAATGGTGTT+TGG | 0.390364 | 7.3:-4103180 | MS.gene22793:CDS |
| CTTGGTTTAAGCAAATGTAT+TGG | 0.391377 | 7.3:-4101980 | MS.gene22793:CDS |
| TTGATACTGAGTCGAGTTAC+CGG | 0.396382 | 7.3:-4103410 | MS.gene22793:CDS |
| TGTTTAAATGTTGTCTGAAT+CGG | 0.401098 | 7.3:-4103711 | None:intergenic |
| TGCTATTTAGTGGATGATGT+GGG | 0.402586 | 7.3:-4102509 | MS.gene22793:CDS |
| CTTGTTAATGTCACCATACA+AGG | 0.409638 | 7.3:-4099955 | MS.gene22793:CDS |
| TGTTTGGAGATTTCTGATCT+TGG | 0.412657 | 7.3:-4103164 | MS.gene22793:CDS |
| GAAGTTAGAGTCTTGTGATA+TGG | 0.414100 | 7.3:-4101825 | MS.gene22793:CDS |
| ACTACACCCAACAGCAATCT+TGG | 0.422148 | 7.3:+4103214 | None:intergenic |
| TGCTGTTGGGTGTAGTAAGT+TGG | 0.422629 | 7.3:-4103207 | MS.gene22793:CDS |
| TGCAATTGGAGCCGATGATC+TGG | 0.424186 | 7.3:+4102017 | None:intergenic |
| TTGGTCATCGAGTTGGACTC+TGG | 0.427056 | 7.3:-4103444 | MS.gene22793:CDS |
| TTTGACTAAAGATTTGCAAT+TGG | 0.432024 | 7.3:+4102003 | None:intergenic |
| TTGTTGTGGTCGGATTAAAA+AGG | 0.435833 | 7.3:-4099911 | MS.gene22793:CDS |
| CTTGACCTTACTGACTGTTC+TGG | 0.436002 | 7.3:-4101749 | MS.gene22793:CDS |
| TCAACCTAGCATATTGCAAT+AGG | 0.436371 | 7.3:-4101311 | MS.gene22793:CDS |
| TGCAAATCTTTAGTCAAACT+TGG | 0.441255 | 7.3:-4101998 | MS.gene22793:CDS |
| TGGGTTGGAGATGTTGATTA+AGG | 0.442315 | 7.3:-4103375 | MS.gene22793:CDS |
| CCGACCACAACAAGATATAA+GGG | 0.451659 | 7.3:+4099921 | None:intergenic |
| TTGATCTTTCCGTTTGTCCA+TGG | 0.452761 | 7.3:-4103502 | MS.gene22793:CDS |
| TGTATTGGGGTGACCAACTT+GGG | 0.454831 | 7.3:-4101965 | MS.gene22793:CDS |
| GGCTTGTCCGTTGTTGGAAG+CGG | 0.457675 | 7.3:-4103354 | MS.gene22793:CDS |
| TGAGTAACAAACCTTGAGAT+AGG | 0.460510 | 7.3:+4103091 | None:intergenic |
| TAGTATGCAAGGAGTTTCTC+CGG | 0.462272 | 7.3:-4103613 | MS.gene22793:CDS |
| TAAAGTTCAATTACCGATAG+AGG | 0.463621 | 7.3:+4101488 | None:intergenic |
| GACTTTATCCTCCAGATCAT+CGG | 0.466196 | 7.3:-4102028 | MS.gene22793:CDS |
| TAATGTCACCATACAAGGAT+TGG | 0.466254 | 7.3:-4099950 | MS.gene22793:CDS |
| TTGGGGATTATGCAGGTAGT+AGG | 0.470531 | 7.3:-4101947 | MS.gene22793:CDS |
| GAGTAACCTGAAGCGCCTCC+AGG | 0.471725 | 7.3:-4099995 | MS.gene22793:CDS |
| ATGTATTGGGGTGACCAACT+TGG | 0.482642 | 7.3:-4101966 | MS.gene22793:CDS |
| CTTTCAAACATCACGAGCAT+TGG | 0.483716 | 7.3:-4101222 | MS.gene22793:CDS |
| ATCACCAAAACCCCAACAAT+GGG | 0.485994 | 7.3:+4103322 | None:intergenic |
| TGTAACTGCGTTAGCCCATC+CGG | 0.488352 | 7.3:-4102301 | MS.gene22793:CDS |
| AACGAGGGTGCAAGGTCAGA+TGG | 0.489471 | 7.3:-4099828 | MS.gene22793:CDS |
| GGGCTAGCAGCACTCACAAC+CGG | 0.492449 | 7.3:-4101354 | MS.gene22793:CDS |
| TGTGTACGCATAGGAGATGA+TGG | 0.493543 | 7.3:-4101375 | MS.gene22793:CDS |
| CGGGTTAGGGTACGTTGGGT+TGG | 0.493821 | 7.3:-4103390 | MS.gene22793:CDS |
| TGGAGAAGTTGAGTTTGAAA+TGG | 0.494463 | 7.3:-4103187 | MS.gene22793:CDS |
| ATCCTCGATCCATGGACAAA+CGG | 0.494791 | 7.3:+4103493 | None:intergenic |
| AACTTGATCCAATCTGATAC+AGG | 0.498440 | 7.3:+4101789 | None:intergenic |
| TTGAGCGTAATTAGAATTGA+CGG | 0.500560 | 7.3:-4102064 | MS.gene22793:CDS |
| TATGGTGGGATGCTATTTAG+TGG | 0.503476 | 7.3:-4102519 | MS.gene22793:CDS |
| GGCTTATTATCAGTAATTAG+TGG | 0.504182 | 7.3:-4102280 | MS.gene22793:CDS |
| GAGATTGGCCTGTATCAGAT+TGG | 0.508552 | 7.3:-4101797 | MS.gene22793:CDS |
| GGAAAACCATTCGGATTCTC+CGG | 0.511234 | 7.3:-4103574 | MS.gene22793:CDS |
| GGCAAGCTCCAATCCTTGTA+TGG | 0.516053 | 7.3:+4099942 | None:intergenic |
| GGGTTGGCCAAGATTGCTGT+TGG | 0.516666 | 7.3:-4103221 | MS.gene22793:CDS |
| TCTCGATGTTTCCTATCTCA+AGG | 0.517096 | 7.3:-4103102 | MS.gene22793:intron |
| TTATTCACAAAACCTACTGC+AGG | 0.517744 | 7.3:-4101103 | MS.gene22793:intron |
| TGACCGAACTTGACCTCTAT+CGG | 0.517917 | 7.3:-4101501 | MS.gene22793:intron |
| CAACAACCCGGAAAACCATT+CGG | 0.518160 | 7.3:-4103583 | MS.gene22793:CDS |
| TTACCGGGTTAGGGTACGTT+GGG | 0.518958 | 7.3:-4103394 | MS.gene22793:CDS |
| GATTAAGGCTTGTCCGTTGT+TGG | 0.519624 | 7.3:-4103360 | MS.gene22793:CDS |
| GTTTGTCCATGGATCGAGGA+TGG | 0.519956 | 7.3:-4103491 | MS.gene22793:CDS |
| TATCGACTTTACTGAACCAT+TGG | 0.520255 | 7.3:-4103463 | MS.gene22793:CDS |
| ATGCTATTTAGTGGATGATG+TGG | 0.521818 | 7.3:-4102510 | MS.gene22793:CDS |
| CATGGCCAACTTGTTGCATC+CGG | 0.523833 | 7.3:+4101335 | None:intergenic |
| TGAACCATTGGTCATCGAGT+TGG | 0.523846 | 7.3:-4103451 | MS.gene22793:CDS |
| TATTGATCGTAAAGATTCGT+TGG | 0.528475 | 7.3:+4102571 | None:intergenic |
| GGTTGGCCAAGATTGCTGTT+GGG | 0.532427 | 7.3:-4103220 | MS.gene22793:CDS |
| GGTCTTGAGCAGATCAATGC+AGG | 0.536313 | 7.3:-4102250 | MS.gene22793:CDS |
| ACTAATTACTGATAATAAGC+CGG | 0.542644 | 7.3:+4102282 | None:intergenic |
| ACTGCTCCATCCTCGATCCA+TGG | 0.542978 | 7.3:+4103485 | None:intergenic |
| AGGAGTTACTGATATTGGGT+TGG | 0.548267 | 7.3:-4103237 | MS.gene22793:CDS |
| TTGAAGTGTATCAGCAATCT+CGG | 0.548402 | 7.3:-4101273 | MS.gene22793:CDS |
| TAATCCTATTGCAATATGCT+AGG | 0.548407 | 7.3:+4101307 | None:intergenic |
| GTTGATGTTTCCCATTGTTG+GGG | 0.555403 | 7.3:-4103332 | MS.gene22793:CDS |
| GCTGCTGCGTTATCGTGCGG+TGG | 0.555465 | 7.3:-4103293 | MS.gene22793:CDS |
| ACTCTAACTTCAGACTTGCA+AGG | 0.556844 | 7.3:+4101837 | None:intergenic |
| CTGCTGCGTTATCGTGCGGT+GGG | 0.557202 | 7.3:-4103292 | MS.gene22793:CDS |
| AGAGTTTGCTATAGTAGAGA+TGG | 0.560482 | 7.3:+4101868 | None:intergenic |
| TGGTCATCGAGTTGGACTCT+GGG | 0.561826 | 7.3:-4103443 | MS.gene22793:CDS |
| TTCCGTTTGTCCATGGATCG+AGG | 0.563226 | 7.3:-4103495 | MS.gene22793:CDS |
| TTACCGATAGAGGTCAAGTT+CGG | 0.565963 | 7.3:+4101498 | None:intergenic |
| ATCGTGCGGTGGGAAGTTGA+AGG | 0.566046 | 7.3:-4103282 | MS.gene22793:CDS |
| TATCACCAAAACCCCAACAA+TGG | 0.566383 | 7.3:+4103321 | None:intergenic |
| CTTGCCCTTATATCTTGTTG+TGG | 0.567087 | 7.3:-4099925 | MS.gene22793:CDS |
| ATCAGTAATTAGTGGACATG+AGG | 0.567675 | 7.3:-4102272 | MS.gene22793:CDS |
| TCCGGGTTGTTGATTCGACC+CGG | 0.568378 | 7.3:+4103594 | None:intergenic |
| GATTGTTTCGAGTATTTCTG+AGG | 0.574227 | 7.3:+4099855 | None:intergenic |
| AATCCATGAACGAGGGTGCA+AGG | 0.578850 | 7.3:-4099836 | MS.gene22793:CDS |
| AGTATGCAAGGAGTTTCTCC+GGG | 0.580560 | 7.3:-4103612 | MS.gene22793:CDS |
| TAGAAAAGTACCTTGAGTAG+TGG | 0.582573 | 7.3:+4102461 | None:intergenic |
| TGATACTGAGTCGAGTTACC+GGG | 0.582599 | 7.3:-4103409 | MS.gene22793:CDS |
| AAACATATCAGACATAGGAT+TGG | 0.583300 | 7.3:-4101551 | MS.gene22793:CDS |
| GACCAACTTGGGGATTATGC+AGG | 0.583311 | 7.3:-4101954 | MS.gene22793:CDS |
| GCAATAGGATTACAGACGCA+GGG | 0.586052 | 7.3:-4101296 | MS.gene22793:CDS |
| TTCTTCAAGCCGTTAGTGAG+AGG | 0.587612 | 7.3:+4102097 | None:intergenic |
| TTACGCCAGAACAGTCAGTA+AGG | 0.589278 | 7.3:+4101744 | None:intergenic |
| ACATCAACCGCTTCCAACAA+CGG | 0.589589 | 7.3:+4103347 | None:intergenic |
| AAGTGAGTAAGAATTCAATC+CGG | 0.590350 | 7.3:+4103555 | None:intergenic |
| CACAACCGGATGCAACAAGT+TGG | 0.590752 | 7.3:-4101340 | MS.gene22793:CDS |
| TGGTTTAAGCAAATGTATTG+GGG | 0.591699 | 7.3:-4101978 | MS.gene22793:CDS |
| AAAAGGATGTCCACTACTCA+AGG | 0.592117 | 7.3:-4102471 | MS.gene22793:intron |
| CTTTCAGCACCTCTCACTAA+CGG | 0.592218 | 7.3:-4102106 | MS.gene22793:CDS |
| TGCAGGCAATTGATGTATCA+AGG | 0.592534 | 7.3:-4102324 | MS.gene22793:intron |
| TGCAATAGGATTACAGACGC+AGG | 0.597246 | 7.3:-4101297 | MS.gene22793:CDS |
| TGTTCTGGCGTAAATGACAT+AGG | 0.598214 | 7.3:-4101734 | MS.gene22793:intron |
| GAGTCCAACTCGATGACCAA+TGG | 0.598813 | 7.3:+4103447 | None:intergenic |
| ATTACTGATAATAAGCCGGA+TGG | 0.599380 | 7.3:+4102286 | None:intergenic |
| ACGAGGGTGCAAGGTCAGAT+GGG | 0.601675 | 7.3:-4099827 | MS.gene22793:CDS |
| AATTGCAGCTGTGTACGCAT+AGG | 0.603745 | 7.3:-4101384 | MS.gene22793:intron |
| TGAGTCGAGTTACCGGGTTA+GGG | 0.607957 | 7.3:-4103403 | MS.gene22793:CDS |
| TACCTGCATAATCCCCAAGT+TGG | 0.609296 | 7.3:+4101952 | None:intergenic |
| TTACTGATAATAAGCCGGAT+GGG | 0.610945 | 7.3:+4102287 | None:intergenic |
| CAACCCAACGTACCCTAACC+CGG | 0.612237 | 7.3:+4103391 | None:intergenic |
| GCAATATGCTAGGTTGAGCA+TGG | 0.616920 | 7.3:+4101317 | None:intergenic |
| TTCAATCCGGAGAATCCGAA+TGG | 0.621223 | 7.3:+4103568 | None:intergenic |
| CTCGAAACAATCCATGAACG+AGG | 0.626001 | 7.3:-4099844 | MS.gene22793:CDS |
| GTTACCGGGTTAGGGTACGT+TGG | 0.627895 | 7.3:-4103395 | MS.gene22793:CDS |
| TGATACCACTGACCTGCAGT+AGG | 0.633428 | 7.3:+4101091 | None:intergenic |
| GTATTGGGGTGACCAACTTG+GGG | 0.634312 | 7.3:-4101964 | MS.gene22793:CDS |
| GCTATTTAGTGGATGATGTG+GGG | 0.635421 | 7.3:-4102508 | MS.gene22793:CDS |
| TCAGTAATTAGTGGACATGA+GGG | 0.638404 | 7.3:-4102271 | MS.gene22793:CDS |
| TGCACAAACATATCAGACAT+AGG | 0.640787 | 7.3:-4101556 | MS.gene22793:CDS |
| GTGTACGCATAGGAGATGAT+GGG | 0.645765 | 7.3:-4101374 | MS.gene22793:CDS |
| AATTGGAGCCGATGATCTGG+AGG | 0.656827 | 7.3:+4102020 | None:intergenic |
| GGTATTCTGTCACTTGACAG+AGG | 0.664098 | 7.3:-4103690 | MS.gene22793:CDS |
| ACGTGTCAGATCATGTGTTG+TGG | 0.671433 | 7.3:-4100026 | MS.gene22793:CDS |
| TCCGGGTCGAATCAACAACC+CGG | 0.677782 | 7.3:-4103595 | MS.gene22793:CDS |
| GAGGCTGCTGCGTTATCGTG+CGG | 0.680487 | 7.3:-4103296 | MS.gene22793:CDS |
| TCGAAACAATCCATGAACGA+GGG | 0.712359 | 7.3:-4099843 | MS.gene22793:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTTATAACAGTAAAATA+AGG | + | chr7.3:4101359-4101378 | None:intergenic | 15.0% |
| !! | ATTAATATTGATAAGTGTTT+AGG | - | chr7.3:4100269-4100288 | MS.gene22793:intron | 15.0% |
| !! | TAATATCATAATATGAGAAA+CGG | + | chr7.3:4103097-4103116 | None:intergenic | 15.0% |
| !!! | TCATTTTGTTCTTTATAAAT+CGG | - | chr7.3:4103020-4103039 | MS.gene22793:intron | 15.0% |
| !! | AAATTAATAAAGTTTGACCA+AGG | - | chr7.3:4101119-4101138 | MS.gene22793:CDS | 20.0% |
| !! | AATGTTGGAGATAAAATAAT+CGG | + | chr7.3:4101883-4101902 | None:intergenic | 20.0% |
| !! | AGAACAAAATGATATGATAT+TGG | + | chr7.3:4103012-4103031 | None:intergenic | 20.0% |
| !! | ATTCATTAAAATTGTAGACA+AGG | - | chr7.3:4102084-4102103 | MS.gene22793:CDS | 20.0% |
| !! | TATCCATTAATTTAATGATG+TGG | - | chr7.3:4100540-4100559 | MS.gene22793:intron | 20.0% |
| !! | TATTCGTAAAGAAATATATG+TGG | - | chr7.3:4100751-4100770 | MS.gene22793:intron | 20.0% |
| !!! | ATGTTAATTTTCGTTCAAAT+AGG | - | chr7.3:4103351-4103370 | MS.gene22793:CDS | 20.0% |
| !!! | CATCATTAAATTAATGGATA+TGG | + | chr7.3:4100540-4100559 | None:intergenic | 20.0% |
| !!! | GGCATATATTCAATTTTTAT+AGG | + | chr7.3:4102512-4102531 | None:intergenic | 20.0% |
| !!! | TGAGTTTTTATCTAAAGTTT+TGG | - | chr7.3:4101313-4101332 | MS.gene22793:CDS | 20.0% |
| ! | AAAAACAGAATGAACAAAAC+AGG | + | chr7.3:4102117-4102136 | None:intergenic | 25.0% |
| ! | AAAATTGAATATATGCCTCA+AGG | - | chr7.3:4102515-4102534 | MS.gene22793:CDS | 25.0% |
| ! | AAACTTGTAAGATTGAAGTT+AGG | - | chr7.3:4101943-4101962 | MS.gene22793:CDS | 25.0% |
| ! | ACTAATTACTGATAATAAGC+CGG | + | chr7.3:4101247-4101266 | None:intergenic | 25.0% |
| ! | ATATGTGGTAATAATGCTTA+TGG | - | chr7.3:4100766-4100785 | MS.gene22793:intron | 25.0% |
| ! | GATTGAAAAATTTATAGCCA+CGG | - | chr7.3:4102603-4102622 | MS.gene22793:intron | 25.0% |
| ! | GTCTTGTATAAAATTGATGA+TGG | - | chr7.3:4101855-4101874 | MS.gene22793:CDS | 25.0% |
| ! | TATTGACATCTTACATCATT+AGG | - | chr7.3:4100929-4100948 | MS.gene22793:intron | 25.0% |
| ! | TGCAATCAATGTTATGTATT+AGG | - | chr7.3:4103419-4103438 | MS.gene22793:CDS | 25.0% |
| ! | TTGCCACATCATTAAATTAA+TGG | + | chr7.3:4100546-4100565 | None:intergenic | 25.0% |
| ! | TTGGTTTAAGCAAATGTATT+GGG | - | chr7.3:4101547-4101566 | MS.gene22793:CDS | 25.0% |
| ! | TTTGACTAAAGATTTGCAAT+TGG | + | chr7.3:4101526-4101545 | None:intergenic | 25.0% |
| !! | AGCGTCTATTTATATTTTGT+AGG | - | chr7.3:4103321-4103340 | MS.gene22793:CDS | 25.0% |
| !! | GTAAAGTAGTTTTTGCATTT+CGG | - | chr7.3:4100659-4100678 | MS.gene22793:intron | 25.0% |
| !! | TCATCAATTTTATACAAGAC+TGG | + | chr7.3:4101855-4101874 | None:intergenic | 25.0% |
| !! | TTTGAAATAACATGTAAAGC+TGG | - | chr7.3:4102878-4102897 | MS.gene22793:intron | 25.0% |
| !! | TTTTATAGGATGATGATTGT+TGG | + | chr7.3:4102498-4102517 | None:intergenic | 25.0% |
| !!! | TCTTTCTTTCGTTTTTCTTT+TGG | + | chr7.3:4102941-4102960 | None:intergenic | 25.0% |
| !!! | TGGCTATAAATTTTTCAATC+AGG | + | chr7.3:4102603-4102622 | None:intergenic | 25.0% |
| AAACATATCAGACATAGGAT+TGG | - | chr7.3:4101975-4101994 | MS.gene22793:CDS | 30.0% | |
| AAGCGTATTGTCATTGAAAT+AGG | + | chr7.3:4100825-4100844 | None:intergenic | 30.0% | |
| AAGTGAGTAAGAATTCAATC+CGG | + | chr7.3:4099974-4099993 | None:intergenic | 30.0% | |
| ACTGGTATCTGATATACTTA+CGG | + | chr7.3:4101837-4101856 | None:intergenic | 30.0% | |
| CATTAAAATTGTAGACAAGG+TGG | - | chr7.3:4102087-4102106 | MS.gene22793:CDS | 30.0% | |
| CTTAGAAAGTAACAAATCCA+AGG | + | chr7.3:4102557-4102576 | None:intergenic | 30.0% | |
| CTTGGTTTAAGCAAATGTAT+TGG | - | chr7.3:4101546-4101565 | MS.gene22793:CDS | 30.0% | |
| GATAGTATTACAGTGTACTT+GGG | + | chr7.3:4100692-4100711 | None:intergenic | 30.0% | |
| GGCTTATTATCAGTAATTAG+TGG | - | chr7.3:4101246-4101265 | MS.gene22793:CDS | 30.0% | |
| GTCTAAAAAAATGTCACCTT+TGG | - | chr7.3:4100618-4100637 | MS.gene22793:intron | 30.0% | |
| GTTTAGGAGTTACTGATATT+GGG | - | chr7.3:4100285-4100304 | MS.gene22793:intron | 30.0% | |
| TAAAGTTCAATTACCGATAG+AGG | + | chr7.3:4102041-4102060 | None:intergenic | 30.0% | |
| TAATCCTATTGCAATATGCT+AGG | + | chr7.3:4102222-4102241 | None:intergenic | 30.0% | |
| TAATTGAACTTTAGTCAACG+TGG | - | chr7.3:4102048-4102067 | MS.gene22793:CDS | 30.0% | |
| TATAGACTAATACTGTTCCT+CGG | - | chr7.3:4101381-4101400 | MS.gene22793:intron | 30.0% | |
| TATTCTTGCATTCTCATAGA+AGG | - | chr7.3:4103131-4103150 | MS.gene22793:CDS | 30.0% | |
| TATTGATCGTAAAGATTCGT+TGG | + | chr7.3:4100958-4100977 | None:intergenic | 30.0% | |
| TGATAGTATTACAGTGTACT+TGG | + | chr7.3:4100693-4100712 | None:intergenic | 30.0% | |
| TGCAAATCTTTAGTCAAACT+TGG | - | chr7.3:4101528-4101547 | MS.gene22793:CDS | 30.0% | |
| TGGTTTAAGCAAATGTATTG+GGG | - | chr7.3:4101548-4101567 | MS.gene22793:CDS | 30.0% | |
| TGTTTAGGAGTTACTGATAT+TGG | - | chr7.3:4100284-4100303 | MS.gene22793:intron | 30.0% | |
| TTAATAAAGTTTGACCAAGG+TGG | - | chr7.3:4101122-4101141 | MS.gene22793:CDS | 30.0% | |
| TTAGATAAAAACTCACTGAG+AGG | + | chr7.3:4101308-4101327 | None:intergenic | 30.0% | |
| TTGAGCGTAATTAGAATTGA+CGG | - | chr7.3:4101462-4101481 | MS.gene22793:intron | 30.0% | |
| TTGATAAACCAAACTGGAAA+CGG | - | chr7.3:4103255-4103274 | MS.gene22793:CDS | 30.0% | |
| TTTGTATGAACTATGCACTA+TGG | - | chr7.3:4100463-4100482 | MS.gene22793:intron | 30.0% | |
| ! | AAAGCTCGAAGTTTTCATTA+TGG | - | chr7.3:4100989-4101008 | MS.gene22793:intron | 30.0% |
| ! | ATCTTTTCGATTAGTATGCA+AGG | - | chr7.3:4099902-4099921 | MS.gene22793:CDS | 30.0% |
| ! | GGACATACTTTTCTTTTAGA+AGG | + | chr7.3:4102477-4102496 | None:intergenic | 30.0% |
| ! | GGATTTACTTATCAGAGTTT+TGG | - | chr7.3:4099857-4099876 | MS.gene22793:CDS | 30.0% |
| ! | TTGCGAAAAACTTGATGATA+CGG | - | chr7.3:4102381-4102400 | MS.gene22793:intron | 30.0% |
| ! | TTGTTCTTTTAATGTGTTGC+AGG | - | chr7.3:4101185-4101204 | MS.gene22793:CDS | 30.0% |
| ! | TTTTACATTATCACCTTGCT+CGG | - | chr7.3:4100850-4100869 | MS.gene22793:intron | 30.0% |
| !! | CTTGGATTTGTTACTTTCTA+AGG | - | chr7.3:4102555-4102574 | MS.gene22793:CDS | 30.0% |
| AACTTGATCCAATCTGATAC+AGG | + | chr7.3:4101740-4101759 | None:intergenic | 35.0% | |
| AAGCACCACCTTAGATTATT+CGG | + | chr7.3:4103178-4103197 | None:intergenic | 35.0% | |
| ACACTCTTGATAAACCAAAC+TGG | - | chr7.3:4103249-4103268 | MS.gene22793:CDS | 35.0% | |
| ACATTTGCACAACTATTGAC+TGG | - | chr7.3:4102983-4103002 | MS.gene22793:intron | 35.0% | |
| AGTGTCAATTATGTTCCTTG+AGG | + | chr7.3:4102533-4102552 | None:intergenic | 35.0% | |
| AGTTAAACTTGTGACAGCAA+AGG | + | chr7.3:4102772-4102791 | None:intergenic | 35.0% | |
| ATAGACTAATACTGTTCCTC+GGG | - | chr7.3:4101382-4101401 | MS.gene22793:intron | 35.0% | |
| ATTACTGATAATAAGCCGGA+TGG | + | chr7.3:4101243-4101262 | None:intergenic | 35.0% | |
| CACTTCTAGTCAAAAACCAA+AGG | + | chr7.3:4100637-4100656 | None:intergenic | 35.0% | |
| CTTGTTAATGTCACCATACA+AGG | - | chr7.3:4103571-4103590 | MS.gene22793:CDS | 35.0% | |
| GAACATAATTGACACTACCT+TGG | - | chr7.3:4102537-4102556 | MS.gene22793:CDS | 35.0% | |
| GAGAATGCAAGAATAAGAGT+TGG | + | chr7.3:4103126-4103145 | None:intergenic | 35.0% | |
| GGTACATTTAAATACAGACG+AGG | + | chr7.3:4102686-4102705 | None:intergenic | 35.0% | |
| GTTTGGAGATTTCTGATCTT+GGG | - | chr7.3:4100363-4100382 | MS.gene22793:intron | 35.0% | |
| TAATGTCACCATACAAGGAT+TGG | - | chr7.3:4103576-4103595 | MS.gene22793:CDS | 35.0% | |
| TATAAAAGCCGTTTCCAGTT+TGG | + | chr7.3:4103266-4103285 | None:intergenic | 35.0% | |
| TCAACCTAGCATATTGCAAT+AGG | - | chr7.3:4102215-4102234 | MS.gene22793:intron | 35.0% | |
| TGAGTAACAAACCTTGAGAT+AGG | + | chr7.3:4100438-4100457 | None:intergenic | 35.0% | |
| TGCACAAACATATCAGACAT+AGG | - | chr7.3:4101970-4101989 | MS.gene22793:CDS | 35.0% | |
| TGGAGAAGTTGAGTTTGAAA+TGG | - | chr7.3:4100339-4100358 | MS.gene22793:intron | 35.0% | |
| TGGATATGGATATGACAATG+TGG | + | chr7.3:4100526-4100545 | None:intergenic | 35.0% | |
| TGTGATATGGTTACTGAGAT+TGG | - | chr7.3:4101714-4101733 | MS.gene22793:intron | 35.0% | |
| TGTTTGGAGATTTCTGATCT+TGG | - | chr7.3:4100362-4100381 | MS.gene22793:intron | 35.0% | |
| TTACTGATAATAAGCCGGAT+GGG | + | chr7.3:4101242-4101261 | None:intergenic | 35.0% | |
| TTATTCACAAAACCTACTGC+AGG | - | chr7.3:4102423-4102442 | MS.gene22793:intron | 35.0% | |
| TTGAAGTGTATCAGCAATCT+CGG | - | chr7.3:4102253-4102272 | MS.gene22793:CDS | 35.0% | |
| TTGCTTCACCGAATAATCTA+AGG | - | chr7.3:4103167-4103186 | MS.gene22793:CDS | 35.0% | |
| TTGTTGTGGTCGGATTAAAA+AGG | - | chr7.3:4103615-4103634 | MS.gene22793:CDS | 35.0% | |
| ! | ACTGGAAACGGCTTTTATAT+TGG | - | chr7.3:4103267-4103286 | MS.gene22793:CDS | 35.0% |
| ! | ATCAGTAATTAGTGGACATG+AGG | - | chr7.3:4101254-4101273 | MS.gene22793:CDS | 35.0% |
| ! | ATGCTATTTAGTGGATGATG+TGG | - | chr7.3:4101016-4101035 | MS.gene22793:intron | 35.0% |
| ! | CTCGAAGTTTTCATTATGGT+GGG | - | chr7.3:4100993-4101012 | MS.gene22793:intron | 35.0% |
| ! | GAAGTTAGAGTCTTGTGATA+TGG | - | chr7.3:4101701-4101720 | MS.gene22793:intron | 35.0% |
| ! | GATTGTTTCGAGTATTTCTG+AGG | + | chr7.3:4103674-4103693 | None:intergenic | 35.0% |
| ! | GTTGAGTTTGAAATGGTGTT+TGG | - | chr7.3:4100346-4100365 | MS.gene22793:intron | 35.0% |
| ! | TCAGTAATTAGTGGACATGA+GGG | - | chr7.3:4101255-4101274 | MS.gene22793:CDS | 35.0% |
| ! | TGCGAAAAACTTGATGATAC+GGG | - | chr7.3:4102382-4102401 | MS.gene22793:intron | 35.0% |
| ! | TGCTATTTAGTGGATGATGT+GGG | - | chr7.3:4101017-4101036 | MS.gene22793:intron | 35.0% |
| !! | AACTTGATGATACGGGTTTT+CGG | - | chr7.3:4102389-4102408 | MS.gene22793:intron | 35.0% |
| !! | AGAGTTTGCTATAGTAGAGA+TGG | + | chr7.3:4101661-4101680 | None:intergenic | 35.0% |
| !! | CTGTGCTTTTATTTGTCTTC+AGG | + | chr7.3:4102811-4102830 | None:intergenic | 35.0% |
| !! | TAGAAAAGTACCTTGAGTAG+TGG | + | chr7.3:4101068-4101087 | None:intergenic | 35.0% |
| !! | TATCGACTTTACTGAACCAT+TGG | - | chr7.3:4100063-4100082 | MS.gene22793:intron | 35.0% |
| AAAAGGATGTCCACTACTCA+AGG | - | chr7.3:4101055-4101074 | MS.gene22793:intron | 40.0% | |
| AACTTCAGACTTGCAAGGTT+TGG | + | chr7.3:4101687-4101706 | None:intergenic | 40.0% | |
| ACCCAAACAAGACACAAACT+AGG | + | chr7.3:4102648-4102667 | None:intergenic | 40.0% | |
| ACTCTAACTTCAGACTTGCA+AGG | + | chr7.3:4101692-4101711 | None:intergenic | 40.0% | |
| AGCATGTTTATTACCGAGCA+AGG | + | chr7.3:4100866-4100885 | None:intergenic | 40.0% | |
| AGGAGTTACTGATATTGGGT+TGG | - | chr7.3:4100289-4100308 | MS.gene22793:intron | 40.0% | |
| ATCACCAAAACCCCAACAAT+GGG | + | chr7.3:4100207-4100226 | None:intergenic | 40.0% | |
| ATGTACCACTTCTCTATGCA+TGG | - | chr7.3:4102699-4102718 | MS.gene22793:intron | 40.0% | |
| CCCAAACAAGACACAAACTA+GGG | + | chr7.3:4102647-4102666 | None:intergenic | 40.0% | |
| CCGACCACAACAAGATATAA+GGG | + | chr7.3:4103608-4103627 | None:intergenic | 40.0% | |
| CTTCACCGAATAATCTAAGG+TGG | - | chr7.3:4103170-4103189 | MS.gene22793:CDS | 40.0% | |
| CTTGCCCTTATATCTTGTTG+TGG | - | chr7.3:4103601-4103620 | MS.gene22793:CDS | 40.0% | |
| CTTTCAAACATCACGAGCAT+TGG | - | chr7.3:4102304-4102323 | MS.gene22793:CDS | 40.0% | |
| GACTTTATCCTCCAGATCAT+CGG | - | chr7.3:4101498-4101517 | MS.gene22793:intron | 40.0% | |
| GGGTTGCAGTTTCTTGAAAA+AGG | - | chr7.3:4101038-4101057 | MS.gene22793:intron | 40.0% | |
| GTTGATGTTTCCCATTGTTG+GGG | - | chr7.3:4100194-4100213 | MS.gene22793:intron | 40.0% | |
| TAGTATGCAAGGAGTTTCTC+CGG | - | chr7.3:4099913-4099932 | MS.gene22793:CDS | 40.0% | |
| TATCACCAAAACCCCAACAA+TGG | + | chr7.3:4100208-4100227 | None:intergenic | 40.0% | |
| TCATTGAAATAGGCTCCTGT+TGG | + | chr7.3:4100815-4100834 | None:intergenic | 40.0% | |
| TCCGACCACAACAAGATATA+AGG | + | chr7.3:4103609-4103628 | None:intergenic | 40.0% | |
| TCGAAACAATCCATGAACGA+GGG | - | chr7.3:4103683-4103702 | MS.gene22793:CDS | 40.0% | |
| TCTCGATGTTTCCTATCTCA+AGG | - | chr7.3:4100424-4100443 | MS.gene22793:intron | 40.0% | |
| TCTTGCATTCTCATAGAAGG+TGG | - | chr7.3:4103134-4103153 | MS.gene22793:CDS | 40.0% | |
| TGCAGGCAATTGATGTATCA+AGG | - | chr7.3:4101202-4101221 | MS.gene22793:CDS | 40.0% | |
| TGTACCACTTCTCTATGCAT+GGG | - | chr7.3:4102700-4102719 | MS.gene22793:intron | 40.0% | |
| TGTTCTGGCGTAAATGACAT+AGG | - | chr7.3:4101792-4101811 | MS.gene22793:CDS | 40.0% | |
| TTACCGATAGAGGTCAAGTT+CGG | + | chr7.3:4102031-4102050 | None:intergenic | 40.0% | |
| TTGATACTGAGTCGAGTTAC+CGG | - | chr7.3:4100116-4100135 | MS.gene22793:intron | 40.0% | |
| TTGATCTTTCCGTTTGTCCA+TGG | - | chr7.3:4100024-4100043 | MS.gene22793:CDS | 40.0% | |
| ! | AATTGACGGTGTTCGAGTTT+CGG | - | chr7.3:4101476-4101495 | MS.gene22793:intron | 40.0% |
| ! | ACCCTAGTTTGTGTCTTGTT+TGG | - | chr7.3:4102643-4102662 | MS.gene22793:intron | 40.0% |
| ! | AGGTCAAGTTCGGTCAATTT+TGG | + | chr7.3:4102021-4102040 | None:intergenic | 40.0% |
| ! | CCCTTATATCTTGTTGTGGT+CGG | - | chr7.3:4103605-4103624 | MS.gene22793:CDS | 40.0% |
| ! | GATACACAAGTTTTGCATCC+TGG | + | chr7.3:4103552-4103571 | None:intergenic | 40.0% |
| ! | GCTATTTAGTGGATGATGTG+GGG | - | chr7.3:4101018-4101037 | MS.gene22793:intron | 40.0% |
| ! | GCTCGAAGTTTTCATTATGG+TGG | - | chr7.3:4100992-4101011 | MS.gene22793:intron | 40.0% |
| ! | GGTCAAGTTCGGTCAATTTT+GGG | + | chr7.3:4102020-4102039 | None:intergenic | 40.0% |
| ! | GGTTGATGTTTCCCATTGTT+GGG | - | chr7.3:4100193-4100212 | MS.gene22793:intron | 40.0% |
| ! | TATGGTGGGATGCTATTTAG+TGG | - | chr7.3:4101007-4101026 | MS.gene22793:intron | 40.0% |
| ! | TGGGTTGGAGATGTTGATTA+AGG | - | chr7.3:4100151-4100170 | MS.gene22793:intron | 40.0% |
| !! | ACTTGATGATACGGGTTTTC+GGG | - | chr7.3:4102390-4102409 | MS.gene22793:intron | 40.0% |
| !! | CCCTAGTTTGTGTCTTGTTT+GGG | - | chr7.3:4102644-4102663 | MS.gene22793:intron | 40.0% |
| !!! | TCTCTGATTTTGAGTTGCGT+GGG | - | chr7.3:4102281-4102300 | MS.gene22793:CDS | 40.0% |
| AAACTAGGGTTCTTCGCCTT+TGG | + | chr7.3:4102633-4102652 | None:intergenic | 45.0% | |
| AATTGCAGCTGTGTACGCAT+AGG | - | chr7.3:4102142-4102161 | MS.gene22793:intron | 45.0% | |
| ACATCAACCGCTTCCAACAA+CGG | + | chr7.3:4100182-4100201 | None:intergenic | 45.0% | |
| ACGTGTCAGATCATGTGTTG+TGG | - | chr7.3:4103500-4103519 | MS.gene22793:CDS | 45.0% | |
| ACTACACCCAACAGCAATCT+TGG | + | chr7.3:4100315-4100334 | None:intergenic | 45.0% | |
| AGTATGCAAGGAGTTTCTCC+GGG | - | chr7.3:4099914-4099933 | MS.gene22793:CDS | 45.0% | |
| ATCCTCGATCCATGGACAAA+CGG | + | chr7.3:4100036-4100055 | None:intergenic | 45.0% | |
| ATGTATTGGGGTGACCAACT+TGG | - | chr7.3:4101560-4101579 | MS.gene22793:CDS | 45.0% | |
| CAAACTCCACAAAACCACCT+TGG | + | chr7.3:4101139-4101158 | None:intergenic | 45.0% | |
| CAACAACCCGGAAAACCATT+CGG | - | chr7.3:4099943-4099962 | MS.gene22793:CDS | 45.0% | |
| CTCGAAACAATCCATGAACG+AGG | - | chr7.3:4103682-4103701 | MS.gene22793:CDS | 45.0% | |
| CTGTTGGCAAGCGATAAGAA+CGG | + | chr7.3:4100799-4100818 | None:intergenic | 45.0% | |
| CTTTCAGCACCTCTCACTAA+CGG | - | chr7.3:4101420-4101439 | MS.gene22793:intron | 45.0% | |
| GATTAAGGCTTGTCCGTTGT+TGG | - | chr7.3:4100166-4100185 | MS.gene22793:intron | 45.0% | |
| GCAATAGGATTACAGACGCA+GGG | - | chr7.3:4102230-4102249 | MS.gene22793:intron | 45.0% | |
| GGAAAACCATTCGGATTCTC+CGG | - | chr7.3:4099952-4099971 | MS.gene22793:CDS | 45.0% | |
| GTGTACGCATAGGAGATGAT+GGG | - | chr7.3:4102152-4102171 | MS.gene22793:intron | 45.0% | |
| TACCTGCATAATCCCCAAGT+TGG | + | chr7.3:4101577-4101596 | None:intergenic | 45.0% | |
| TGAACCATTGGTCATCGAGT+TGG | - | chr7.3:4100075-4100094 | MS.gene22793:intron | 45.0% | |
| TGACCGAACTTGACCTCTAT+CGG | - | chr7.3:4102025-4102044 | MS.gene22793:CDS | 45.0% | |
| TGATACTGAGTCGAGTTACC+GGG | - | chr7.3:4100117-4100136 | MS.gene22793:intron | 45.0% | |
| TGCAATAGGATTACAGACGC+AGG | - | chr7.3:4102229-4102248 | MS.gene22793:intron | 45.0% | |
| TGCAGTCAGTTGCAAGAGAT+TGG | - | chr7.3:4102339-4102358 | MS.gene22793:intron | 45.0% | |
| TGCTGTTGGGTGTAGTAAGT+TGG | - | chr7.3:4100319-4100338 | MS.gene22793:intron | 45.0% | |
| TGTATTGGGGTGACCAACTT+GGG | - | chr7.3:4101561-4101580 | MS.gene22793:CDS | 45.0% | |
| TGTGTACGCATAGGAGATGA+TGG | - | chr7.3:4102151-4102170 | MS.gene22793:intron | 45.0% | |
| TTACGCCAGAACAGTCAGTA+AGG | + | chr7.3:4101785-4101804 | None:intergenic | 45.0% | |
| TTATAGCCACGGTCTTCCAA+AGG | - | chr7.3:4102614-4102633 | MS.gene22793:intron | 45.0% | |
| TTCAATCCGGAGAATCCGAA+TGG | + | chr7.3:4099961-4099980 | None:intergenic | 45.0% | |
| TTCTTCAAGCCGTTAGTGAG+AGG | + | chr7.3:4101432-4101451 | None:intergenic | 45.0% | |
| TTGGGGATTATGCAGGTAGT+AGG | - | chr7.3:4101579-4101598 | MS.gene22793:CDS | 45.0% | |
| ! | ACACAAGTTTTGCATCCTGG+AGG | + | chr7.3:4103549-4103568 | None:intergenic | 45.0% |
| ! | CGGTTGATGTTTCCCATTGT+TGG | - | chr7.3:4100192-4100211 | MS.gene22793:intron | 45.0% |
| ! | CTTGACCTTACTGACTGTTC+TGG | - | chr7.3:4101777-4101796 | MS.gene22793:CDS | 45.0% |
| ! | GAGAATCCGAATGGTTTTCC+GGG | + | chr7.3:4099952-4099971 | None:intergenic | 45.0% |
| ! | GCAATATGCTAGGTTGAGCA+TGG | + | chr7.3:4102212-4102231 | None:intergenic | 45.0% |
| ! | GGAGAATCCGAATGGTTTTC+CGG | + | chr7.3:4099953-4099972 | None:intergenic | 45.0% |
| ! | GGTATTCTGTCACTTGACAG+AGG | - | chr7.3:4099836-4099855 | MS.gene22793:CDS | 45.0% |
| ! | GTTTCCCATTGTTGGGGTTT+TGG | - | chr7.3:4100200-4100219 | MS.gene22793:intron | 45.0% |
| !! | GAGATTGGCCTGTATCAGAT+TGG | - | chr7.3:4101729-4101748 | MS.gene22793:intron | 45.0% |
| !! | GTTTGACCAAGGTGGTTTTG+TGG | - | chr7.3:4101130-4101149 | MS.gene22793:CDS | 45.0% |
| !! | TTGGGGTTTTGGTGATAGAG+AGG | - | chr7.3:4100211-4100230 | MS.gene22793:intron | 45.0% |
| !!! | CTCTCTGATTTTGAGTTGCG+TGG | - | chr7.3:4102280-4102299 | MS.gene22793:CDS | 45.0% |
| AATTGGAGCCGATGATCTGG+AGG | + | chr7.3:4101509-4101528 | None:intergenic | 50.0% | |
| CAAAACCTACTGCAGGTCAG+TGG | - | chr7.3:4102430-4102449 | MS.gene22793:intron | 50.0% | |
| CACAACCGGATGCAACAAGT+TGG | - | chr7.3:4102186-4102205 | MS.gene22793:intron | 50.0% | |
| CGAACCCATGCATAGAGAAG+TGG | + | chr7.3:4102707-4102726 | None:intergenic | 50.0% | |
| CGTTCTTATCGCTTGCCAAC+AGG | - | chr7.3:4100797-4100816 | MS.gene22793:intron | 50.0% | |
| GACCAACTTGGGGATTATGC+AGG | - | chr7.3:4101572-4101591 | MS.gene22793:CDS | 50.0% | |
| GAGTCCAACTCGATGACCAA+TGG | + | chr7.3:4100082-4100101 | None:intergenic | 50.0% | |
| GCTGCACGAAGACAGAATGT+TGG | + | chr7.3:4101898-4101917 | None:intergenic | 50.0% | |
| GGCAAGCTCCAATCCTTGTA+TGG | + | chr7.3:4103587-4103606 | None:intergenic | 50.0% | |
| GGTCTTGAGCAGATCAATGC+AGG | - | chr7.3:4101276-4101295 | MS.gene22793:CDS | 50.0% | |
| GTATTGGGGTGACCAACTTG+GGG | - | chr7.3:4101562-4101581 | MS.gene22793:CDS | 50.0% | |
| GTTTGTCCATGGATCGAGGA+TGG | - | chr7.3:4100035-4100054 | MS.gene22793:CDS | 50.0% | |
| TGAGTCGAGTTACCGGGTTA+GGG | - | chr7.3:4100123-4100142 | MS.gene22793:intron | 50.0% | |
| TGATACCACTGACCTGCAGT+AGG | + | chr7.3:4102438-4102457 | None:intergenic | 50.0% | |
| TGCAATTGGAGCCGATGATC+TGG | + | chr7.3:4101512-4101531 | None:intergenic | 50.0% | |
| TGTAACTGCGTTAGCCCATC+CGG | - | chr7.3:4101225-4101244 | MS.gene22793:CDS | 50.0% | |
| TTCCGTTTGTCCATGGATCG+AGG | - | chr7.3:4100031-4100050 | MS.gene22793:CDS | 50.0% | |
| ! | AATCCATGAACGAGGGTGCA+AGG | - | chr7.3:4103690-4103709 | MS.gene22793:CDS | 50.0% |
| ! | GGTTGGCCAAGATTGCTGTT+GGG | - | chr7.3:4100306-4100325 | MS.gene22793:intron | 50.0% |
| ! | GTTCCTCGGGCATTTTCTGA+AGG | - | chr7.3:4101395-4101414 | MS.gene22793:intron | 50.0% |
| ! | TTACCGGGTTAGGGTACGTT+GGG | - | chr7.3:4100132-4100151 | MS.gene22793:intron | 50.0% |
| !! | CATGGCCAACTTGTTGCATC+CGG | + | chr7.3:4102194-4102213 | None:intergenic | 50.0% |
| !! | TGGTCATCGAGTTGGACTCT+GGG | - | chr7.3:4100083-4100102 | MS.gene22793:intron | 50.0% |
| !! | TTGGTCATCGAGTTGGACTC+TGG | - | chr7.3:4100082-4100101 | MS.gene22793:intron | 50.0% |
| ACTGCTCCATCCTCGATCCA+TGG | + | chr7.3:4100044-4100063 | None:intergenic | 55.0% | |
| ATCGTGCGGTGGGAAGTTGA+AGG | - | chr7.3:4100244-4100263 | MS.gene22793:intron | 55.0% | |
| CAACCCAACGTACCCTAACC+CGG | + | chr7.3:4100138-4100157 | None:intergenic | 55.0% | |
| CTGAGTCGAGTTACCGGGTT+AGG | - | chr7.3:4100122-4100141 | MS.gene22793:intron | 55.0% | |
| GCTCCTTCAGAAAATGCCCG+AGG | + | chr7.3:4101401-4101420 | None:intergenic | 55.0% | |
| GGCTTGTCCGTTGTTGGAAG+CGG | - | chr7.3:4100172-4100191 | MS.gene22793:intron | 55.0% | |
| TCCGGGTCGAATCAACAACC+CGG | - | chr7.3:4099931-4099950 | MS.gene22793:CDS | 55.0% | |
| TGACCTTGCACCCTCGTTCA+TGG | + | chr7.3:4103696-4103715 | None:intergenic | 55.0% | |
| ! | AACGAGGGTGCAAGGTCAGA+TGG | - | chr7.3:4103698-4103717 | MS.gene22793:CDS | 55.0% |
| ! | ACGAGGGTGCAAGGTCAGAT+GGG | - | chr7.3:4103699-4103718 | MS.gene22793:CDS | 55.0% |
| ! | GTTACCGGGTTAGGGTACGT+TGG | - | chr7.3:4100131-4100150 | MS.gene22793:intron | 55.0% |
| ! | TCTTCGCCTTTGGAAGACCG+TGG | + | chr7.3:4102623-4102642 | None:intergenic | 55.0% |
| !! | GGGTTGGCCAAGATTGCTGT+TGG | - | chr7.3:4100305-4100324 | MS.gene22793:intron | 55.0% |
| !! | TCCGGGTTGTTGATTCGACC+CGG | + | chr7.3:4099935-4099954 | None:intergenic | 55.0% |
| CTGCTGCGTTATCGTGCGGT+GGG | - | chr7.3:4100234-4100253 | MS.gene22793:intron | 60.0% | |
| GAGGCTGCTGCGTTATCGTG+CGG | - | chr7.3:4100230-4100249 | MS.gene22793:intron | 60.0% | |
| ! | CGGGTTAGGGTACGTTGGGT+TGG | - | chr7.3:4100136-4100155 | MS.gene22793:intron | 60.0% |
| ! | GAGTAACCTGAAGCGCCTCC+AGG | - | chr7.3:4103531-4103550 | MS.gene22793:CDS | 60.0% |
| ! | GGGCTAGCAGCACTCACAAC+CGG | - | chr7.3:4102172-4102191 | MS.gene22793:intron | 60.0% |
| !! | TTGCATCCTGGAGGCGCTTC+AGG | + | chr7.3:4103540-4103559 | None:intergenic | 60.0% |
| GCTGCTGCGTTATCGTGCGG+TGG | - | chr7.3:4100233-4100252 | MS.gene22793:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 4099822 | 4103726 | 4099822 | ID=MS.gene22793 |
| chr7.3 | mRNA | 4099822 | 4103726 | 4099822 | ID=MS.gene22793.t1;Parent=MS.gene22793 |
| chr7.3 | exon | 4103103 | 4103726 | 4103103 | ID=MS.gene22793.t1.exon1;Parent=MS.gene22793.t1 |
| chr7.3 | CDS | 4103103 | 4103726 | 4103103 | ID=cds.MS.gene22793.t1;Parent=MS.gene22793.t1 |
| chr7.3 | exon | 4102472 | 4102597 | 4102472 | ID=MS.gene22793.t1.exon2;Parent=MS.gene22793.t1 |
| chr7.3 | CDS | 4102472 | 4102597 | 4102472 | ID=cds.MS.gene22793.t1;Parent=MS.gene22793.t1 |
| chr7.3 | exon | 4102237 | 4102341 | 4102237 | ID=MS.gene22793.t1.exon3;Parent=MS.gene22793.t1 |
| chr7.3 | CDS | 4102237 | 4102341 | 4102237 | ID=cds.MS.gene22793.t1;Parent=MS.gene22793.t1 |
| chr7.3 | exon | 4101735 | 4102131 | 4101735 | ID=MS.gene22793.t1.exon4;Parent=MS.gene22793.t1 |
| chr7.3 | CDS | 4101735 | 4102131 | 4101735 | ID=cds.MS.gene22793.t1;Parent=MS.gene22793.t1 |
| chr7.3 | exon | 4101502 | 4101631 | 4101502 | ID=MS.gene22793.t1.exon5;Parent=MS.gene22793.t1 |
| chr7.3 | CDS | 4101502 | 4101631 | 4101502 | ID=cds.MS.gene22793.t1;Parent=MS.gene22793.t1 |
| chr7.3 | exon | 4101104 | 4101398 | 4101104 | ID=MS.gene22793.t1.exon6;Parent=MS.gene22793.t1 |
| chr7.3 | CDS | 4101104 | 4101398 | 4101104 | ID=cds.MS.gene22793.t1;Parent=MS.gene22793.t1 |
| chr7.3 | exon | 4099822 | 4100067 | 4099822 | ID=MS.gene22793.t1.exon7;Parent=MS.gene22793.t1 |
| chr7.3 | CDS | 4099822 | 4100067 | 4099822 | ID=cds.MS.gene22793.t1;Parent=MS.gene22793.t1 |
| Gene Sequence |
| Protein sequence |
