Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23060.t1 | XP_013450273.1 | 98.2 | 437 | 5 | 1 | 1 | 434 | 45 | 481 | 8.10E-237 | 829.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23060.t1 | Q9FG14 | 45.8 | 456 | 207 | 9 | 16 | 432 | 64 | 518 | 1.4e-88 | 328.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23060.t1 | A0A072U4M5 | 98.2 | 437 | 5 | 1 | 1 | 434 | 45 | 481 | 5.9e-237 | 829.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049368 | MS.gene23060 | 0.821181 | 4.63E-53 | -1.69E-46 |
| MS.gene049411 | MS.gene23060 | 0.822472 | 2.33E-53 | -1.69E-46 |
| MS.gene049580 | MS.gene23060 | 0.812963 | 3.25E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene23060 | 0.803274 | 3.77E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene23060 | 0.807623 | 4.62E-50 | -1.69E-46 |
| MS.gene050752 | MS.gene23060 | 0.822918 | 1.83E-53 | -1.69E-46 |
| MS.gene050838 | MS.gene23060 | 0.836456 | 9.26E-57 | -1.69E-46 |
| MS.gene050945 | MS.gene23060 | 0.820948 | 5.24E-53 | -1.69E-46 |
| MS.gene051003 | MS.gene23060 | 0.826832 | 2.18E-54 | -1.69E-46 |
| MS.gene051043 | MS.gene23060 | 0.816204 | 6.24E-52 | -1.69E-46 |
| MS.gene051233 | MS.gene23060 | 0.808019 | 3.80E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene23060 | 0.824459 | 7.98E-54 | -1.69E-46 |
| MS.gene051343 | MS.gene23060 | 0.847509 | 1.11E-59 | -1.69E-46 |
| MS.gene051363 | MS.gene23060 | 0.813922 | 2.00E-51 | -1.69E-46 |
| MS.gene051365 | MS.gene23060 | 0.844371 | 7.88E-59 | -1.69E-46 |
| MS.gene051676 | MS.gene23060 | 0.850213 | 1.96E-60 | -1.69E-46 |
| MS.gene051856 | MS.gene23060 | 0.809263 | 2.06E-50 | -1.69E-46 |
| MS.gene05188 | MS.gene23060 | 0.821314 | 4.31E-53 | -1.69E-46 |
| MS.gene051902 | MS.gene23060 | 0.95253 | 1.99E-110 | -1.69E-46 |
| MS.gene051975 | MS.gene23060 | 0.843977 | 1.01E-58 | -1.69E-46 |
| MS.gene052072 | MS.gene23060 | 0.848349 | 6.49E-60 | -1.69E-46 |
| MS.gene052296 | MS.gene23060 | 0.823404 | 1.41E-53 | -1.69E-46 |
| MS.gene052307 | MS.gene23060 | 0.805312 | 1.42E-49 | -1.69E-46 |
| MS.gene052342 | MS.gene23060 | 0.804583 | 2.02E-49 | -1.69E-46 |
| MS.gene052434 | MS.gene23060 | 0.814706 | 1.34E-51 | -1.69E-46 |
| MS.gene052479 | MS.gene23060 | 0.805714 | 1.17E-49 | -1.69E-46 |
| MS.gene052818 | MS.gene23060 | -0.811561 | 6.58E-51 | -1.69E-46 |
| MS.gene052932 | MS.gene23060 | 0.809232 | 2.09E-50 | -1.69E-46 |
| MS.gene053045 | MS.gene23060 | 0.823287 | 1.50E-53 | -1.69E-46 |
| MS.gene053058 | MS.gene23060 | 0.825424 | 4.72E-54 | -1.69E-46 |
| MS.gene053298 | MS.gene23060 | 0.801282 | 9.69E-49 | -1.69E-46 |
| MS.gene053564 | MS.gene23060 | 0.809656 | 1.70E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene23060 | 0.815971 | 7.03E-52 | -1.69E-46 |
| MS.gene053786 | MS.gene23060 | 0.80253 | 5.37E-49 | -1.69E-46 |
| MS.gene053879 | MS.gene23060 | 0.821008 | 5.07E-53 | -1.69E-46 |
| MS.gene054403 | MS.gene23060 | 0.823981 | 1.03E-53 | -1.69E-46 |
| MS.gene054413 | MS.gene23060 | 0.800311 | 1.53E-48 | -1.69E-46 |
| MS.gene05469 | MS.gene23060 | 0.833373 | 5.54E-56 | -1.69E-46 |
| MS.gene054709 | MS.gene23060 | 0.808413 | 3.14E-50 | -1.69E-46 |
| MS.gene055311 | MS.gene23060 | 0.825831 | 3.78E-54 | -1.69E-46 |
| MS.gene055313 | MS.gene23060 | 0.816797 | 4.60E-52 | -1.69E-46 |
| MS.gene055314 | MS.gene23060 | 0.825482 | 4.58E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene23060 | 0.809022 | 2.32E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene23060 | 0.819255 | 1.28E-52 | -1.69E-46 |
| MS.gene056181 | MS.gene23060 | 0.807806 | 4.22E-50 | -1.69E-46 |
| MS.gene056390 | MS.gene23060 | 0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene056986 | MS.gene23060 | 0.850093 | 2.12E-60 | -1.69E-46 |
| MS.gene057102 | MS.gene23060 | 0.848212 | 7.08E-60 | -1.69E-46 |
| MS.gene057234 | MS.gene23060 | 0.805534 | 1.27E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene23060 | 0.806764 | 7.02E-50 | -1.69E-46 |
| MS.gene05781 | MS.gene23060 | 0.826045 | 3.36E-54 | -1.69E-46 |
| MS.gene057890 | MS.gene23060 | -0.810575 | 1.08E-50 | -1.69E-46 |
| MS.gene057999 | MS.gene23060 | 0.811665 | 6.25E-51 | -1.69E-46 |
| MS.gene058074 | MS.gene23060 | 0.826056 | 3.34E-54 | -1.69E-46 |
| MS.gene058261 | MS.gene23060 | 0.820679 | 6.04E-53 | -1.69E-46 |
| MS.gene059146 | MS.gene23060 | 0.837821 | 4.15E-57 | -1.69E-46 |
| MS.gene059171 | MS.gene23060 | 0.82173 | 3.46E-53 | -1.69E-46 |
| MS.gene059227 | MS.gene23060 | 0.821949 | 3.08E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene23060 | -0.83172 | 1.42E-55 | -1.69E-46 |
| MS.gene06011 | MS.gene23060 | 0.830691 | 2.55E-55 | -1.69E-46 |
| MS.gene060763 | MS.gene23060 | 0.831639 | 1.49E-55 | -1.69E-46 |
| MS.gene060933 | MS.gene23060 | 0.805178 | 1.51E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene23060 | 0.821257 | 4.45E-53 | -1.69E-46 |
| MS.gene060937 | MS.gene23060 | 0.838405 | 2.93E-57 | -1.69E-46 |
| MS.gene061100 | MS.gene23060 | 0.811055 | 8.48E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23060 | MS.gene034642 | PPI |
| MS.gene034642 | MS.gene23060 | PPI |
| MS.gene007068 | MS.gene23060 | PPI |
| MS.gene23060 | MS.gene39222 | PPI |
| MS.gene46447 | MS.gene23060 | PPI |
| MS.gene23060 | MS.gene46447 | PPI |
| MS.gene23060 | MS.gene051902 | PPI |
| MS.gene57045 | MS.gene23060 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23060.t1 | MTR_7g107000 | 98.169 | 437 | 5 | 1 | 1 | 434 | 45 | 481 | 0.0 | 888 |
| MS.gene23060.t1 | MTR_1g054835 | 63.182 | 440 | 139 | 8 | 13 | 434 | 52 | 486 | 0.0 | 539 |
| MS.gene23060.t1 | MTR_4g130400 | 42.857 | 119 | 65 | 1 | 22 | 140 | 5 | 120 | 3.53e-19 | 89.7 |
| MS.gene23060.t1 | MTR_1g070350 | 45.545 | 101 | 54 | 1 | 20 | 119 | 526 | 626 | 3.41e-16 | 81.6 |
| MS.gene23060.t1 | MTR_5g078300 | 44.737 | 76 | 42 | 0 | 26 | 101 | 620 | 695 | 2.20e-12 | 69.7 |
| MS.gene23060.t1 | MTR_0168s0060 | 33.333 | 186 | 101 | 7 | 26 | 210 | 334 | 497 | 1.42e-11 | 66.6 |
| MS.gene23060.t1 | MTR_4g093150 | 32.692 | 104 | 70 | 0 | 22 | 125 | 72 | 175 | 7.02e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23060.t1 | AT5G06560 | 50.547 | 457 | 186 | 10 | 15 | 432 | 63 | 518 | 1.64e-139 | 409 |
| MS.gene23060.t1 | AT3G11850 | 44.105 | 458 | 207 | 8 | 16 | 432 | 55 | 504 | 2.81e-119 | 357 |
| MS.gene23060.t1 | AT3G11850 | 44.105 | 458 | 207 | 8 | 16 | 432 | 55 | 504 | 2.81e-119 | 357 |
| MS.gene23060.t1 | AT3G54740 | 40.139 | 431 | 182 | 10 | 15 | 428 | 15 | 386 | 3.09e-89 | 276 |
| MS.gene23060.t1 | AT3G54740 | 40.139 | 431 | 182 | 10 | 15 | 428 | 15 | 386 | 3.09e-89 | 276 |
| MS.gene23060.t1 | AT3G54740 | 40.139 | 431 | 182 | 10 | 15 | 428 | 15 | 386 | 3.09e-89 | 276 |
| MS.gene23060.t1 | AT3G54740 | 40.139 | 431 | 182 | 10 | 15 | 428 | 15 | 386 | 3.09e-89 | 276 |
| MS.gene23060.t1 | AT3G54740 | 40.139 | 431 | 182 | 10 | 15 | 428 | 63 | 434 | 4.39e-88 | 275 |
| MS.gene23060.t1 | AT3G54740 | 40.139 | 431 | 182 | 10 | 15 | 428 | 63 | 434 | 4.39e-88 | 275 |
| MS.gene23060.t1 | AT3G54740 | 40.139 | 431 | 182 | 10 | 15 | 428 | 63 | 434 | 4.39e-88 | 275 |
| MS.gene23060.t1 | AT3G54740 | 40.139 | 431 | 182 | 10 | 15 | 428 | 63 | 434 | 4.39e-88 | 275 |
| MS.gene23060.t1 | AT5G16720 | 43.966 | 116 | 59 | 1 | 10 | 125 | 350 | 459 | 2.17e-20 | 94.4 |
| MS.gene23060.t1 | AT4G30830 | 44.860 | 107 | 59 | 0 | 20 | 126 | 12 | 118 | 1.82e-19 | 89.7 |
| MS.gene23060.t1 | AT4G30830 | 44.860 | 107 | 59 | 0 | 20 | 126 | 12 | 118 | 1.82e-19 | 89.7 |
| MS.gene23060.t1 | AT5G57830 | 44.697 | 132 | 65 | 1 | 1 | 132 | 2 | 125 | 3.89e-19 | 89.4 |
| MS.gene23060.t1 | AT2G24140 | 43.519 | 108 | 61 | 0 | 21 | 128 | 14 | 121 | 1.99e-17 | 83.2 |
| MS.gene23060.t1 | AT2G24140 | 43.519 | 108 | 61 | 0 | 21 | 128 | 14 | 121 | 1.99e-17 | 83.2 |
| MS.gene23060.t1 | AT1G70750 | 44.000 | 100 | 56 | 0 | 26 | 125 | 416 | 515 | 4.19e-15 | 78.2 |
| MS.gene23060.t1 | AT4G13630 | 47.525 | 101 | 52 | 1 | 24 | 123 | 222 | 322 | 1.77e-14 | 75.9 |
| MS.gene23060.t1 | AT4G13630 | 47.525 | 101 | 52 | 1 | 24 | 123 | 222 | 322 | 1.77e-14 | 75.9 |
| MS.gene23060.t1 | AT2G30690 | 41.584 | 101 | 58 | 1 | 20 | 119 | 609 | 709 | 5.12e-14 | 74.7 |
| MS.gene23060.t1 | AT2G30690 | 41.584 | 101 | 58 | 1 | 20 | 119 | 609 | 709 | 5.12e-14 | 74.7 |
| MS.gene23060.t1 | AT1G04890 | 49.474 | 95 | 48 | 0 | 26 | 120 | 114 | 208 | 1.92e-13 | 72.0 |
| MS.gene23060.t1 | AT1G08800 | 37.391 | 115 | 72 | 0 | 5 | 119 | 872 | 986 | 4.06e-13 | 72.0 |
| MS.gene23060.t1 | AT1G08800 | 37.391 | 115 | 72 | 0 | 5 | 119 | 872 | 986 | 4.06e-13 | 72.0 |
| MS.gene23060.t1 | AT1G08800 | 37.391 | 115 | 72 | 0 | 5 | 119 | 872 | 986 | 4.06e-13 | 72.0 |
| MS.gene23060.t1 | AT1G08800 | 37.391 | 115 | 72 | 0 | 5 | 119 | 872 | 986 | 4.06e-13 | 72.0 |
| MS.gene23060.t1 | AT4G13160 | 47.368 | 95 | 50 | 0 | 26 | 120 | 117 | 211 | 9.31e-13 | 68.9 |
| MS.gene23060.t1 | AT1G74830 | 42.056 | 107 | 58 | 2 | 26 | 131 | 305 | 408 | 1.13e-12 | 70.1 |
| MS.gene23060.t1 | AT2G24140 | 48.571 | 70 | 36 | 0 | 59 | 128 | 1 | 70 | 8.07e-12 | 65.9 |
| MS.gene23060.t1 | AT2G24140 | 48.571 | 70 | 36 | 0 | 59 | 128 | 1 | 70 | 8.07e-12 | 65.9 |
Find 111 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGGATCGTTTGAGGAATT+TGG | 0.149872 | 7.2:+7236658 | MS.gene23060:CDS |
| ATTATCTACCTTCTTAAAAT+TGG | 0.151355 | 7.2:-7236915 | None:intergenic |
| TAGAGGAATTGTTGTATAAA+AGG | 0.183383 | 7.2:+7236420 | MS.gene23060:CDS |
| GGCGTTGTTCGCGTTGAAAT+TGG | 0.298444 | 7.2:+7236167 | MS.gene23060:CDS |
| CAAAACAAGCTGTGCTTTAT+CGG | 0.300589 | 7.2:-7237155 | None:intergenic |
| GTAACAACTCCTAGGGAGTT+TGG | 0.317502 | 7.2:+7237025 | MS.gene23060:CDS |
| GCGTTGTTCGCGTTGAAATT+GGG | 0.320768 | 7.2:+7236168 | MS.gene23060:CDS |
| TCAAGATTTGTGTTCTGAAT+TGG | 0.320822 | 7.2:+7236241 | MS.gene23060:CDS |
| TCCTAGGGAGTTTGGAAATC+AGG | 0.328062 | 7.2:+7237033 | MS.gene23060:CDS |
| AGGAAGAGGAATAATAATAA+TGG | 0.334301 | 7.2:+7236878 | MS.gene23060:CDS |
| TTCACTTACGTGTGAAGTTC+AGG | 0.346138 | 7.2:+7236457 | MS.gene23060:CDS |
| TCATGTGACTCGTCGTCGTT+TGG | 0.362096 | 7.2:+7236812 | MS.gene23060:CDS |
| AGGAATAATAATAATGGGTC+AGG | 0.364109 | 7.2:+7236884 | MS.gene23060:CDS |
| GATGTTGAGAAGTATGTGTT+TGG | 0.365629 | 7.2:+7236626 | MS.gene23060:CDS |
| ACATTAACTCTCTTCTGTTC+TGG | 0.372528 | 7.2:-7237214 | None:intergenic |
| TGTGACTGTAGGTATATGTT+TGG | 0.373845 | 7.2:+7238218 | MS.gene23060:intron |
| GGGTTGCATCGATTGTTTCC+TGG | 0.382694 | 7.2:+7237429 | MS.gene23060:CDS |
| ATATGTTTCAAGAATGCAAT+TGG | 0.391625 | 7.2:+7238307 | MS.gene23060:CDS |
| CATCCATCTGACTATAAGTT+GGG | 0.397922 | 7.2:-7236709 | None:intergenic |
| AGAGGAATTGTTGTATAAAA+GGG | 0.403693 | 7.2:+7236421 | MS.gene23060:CDS |
| ATGTAAAGCTTCTTTACATA+AGG | 0.410091 | 7.2:-7237070 | None:intergenic |
| ATGTTGAGAAGTATGTGTTT+GGG | 0.413739 | 7.2:+7236627 | MS.gene23060:CDS |
| GGAAGAGGAATAATAATAAT+GGG | 0.420804 | 7.2:+7236879 | MS.gene23060:CDS |
| CAAGGCTCAATGGTAGCTTT+AGG | 0.421216 | 7.2:+7236858 | MS.gene23060:CDS |
| CTCGAATGTTTATTCGTACT+AGG | 0.424909 | 7.2:-7236782 | None:intergenic |
| ATGAATATGTAACAACTCCT+AGG | 0.433427 | 7.2:+7237017 | MS.gene23060:CDS |
| TTCAAGCACTTGAGGCGGAC+AGG | 0.436618 | 7.2:+7237098 | MS.gene23060:CDS |
| TTGATGACCTCTCTTTCTCC+AGG | 0.447921 | 7.2:-7237447 | None:intergenic |
| GTTATAGAGAAGGTGATAGT+TGG | 0.451471 | 7.2:+7236752 | MS.gene23060:CDS |
| AAGCATAGAATGCTGAGTTA+TGG | 0.453031 | 7.2:+7236485 | MS.gene23060:CDS |
| CCATCCATCTGACTATAAGT+TGG | 0.462484 | 7.2:-7236710 | None:intergenic |
| GGAGAATAGAATATCTCAAA+TGG | 0.476799 | 7.2:+7236679 | MS.gene23060:CDS |
| TTGACTGAGTCAGAGGTAGA+AGG | 0.478966 | 7.2:+7236509 | MS.gene23060:CDS |
| CGTTGTTCGCGTTGAAATTG+GGG | 0.481816 | 7.2:+7236169 | MS.gene23060:CDS |
| AAATTGAACGGTGGTGGTGA+TGG | 0.481967 | 7.2:+7236146 | MS.gene23060:CDS |
| AGTAAGCCAGTGTTGCTAGA+TGG | 0.483817 | 7.2:-7238245 | None:intergenic |
| AAATTCCTCAAACGATCCCT+TGG | 0.484142 | 7.2:-7236656 | None:intergenic |
| CTAGTACGAATAAACATTCG+AGG | 0.497895 | 7.2:+7236783 | MS.gene23060:CDS |
| TGCATTACATTACATTTCAA+AGG | 0.506111 | 7.2:-7236566 | None:intergenic |
| GTGACTGTAGGTATATGTTT+GGG | 0.510027 | 7.2:+7238219 | MS.gene23060:intron |
| CAACTTATAGTCAGATGGAT+GGG | 0.510170 | 7.2:+7236711 | MS.gene23060:CDS |
| TCTGAATTCAAAAGCGGACC+TGG | 0.510414 | 7.2:+7236986 | MS.gene23060:CDS |
| TTTGTGTTCTGAATTGGAAG+AGG | 0.512404 | 7.2:+7236247 | MS.gene23060:CDS |
| GTTAATGTGAGATCCTTTGT+TGG | 0.516782 | 7.2:+7237229 | MS.gene23060:CDS |
| TATGTTTCAAGAATGCAATT+GGG | 0.520875 | 7.2:+7238308 | MS.gene23060:CDS |
| GTAGATAATTTGTCCGAGGC+TGG | 0.522155 | 7.2:+7236929 | MS.gene23060:CDS |
| CTAAAGCTACCATTGAGCCT+TGG | 0.523326 | 7.2:-7236857 | None:intergenic |
| AAACTCCAAGGGATCGTTTG+AGG | 0.524729 | 7.2:+7236651 | MS.gene23060:CDS |
| AGATGGATGGGGATTTCAAT+GGG | 0.525949 | 7.2:+7236723 | MS.gene23060:CDS |
| CAGATGGATGGGGATTTCAA+TGG | 0.526604 | 7.2:+7236722 | MS.gene23060:CDS |
| GAAACACCATGAAATGGAAA+AGG | 0.526709 | 7.2:+7236118 | None:intergenic |
| TGAGAAGGCTGAGCTTGAGA+TGG | 0.528315 | 7.2:+7236331 | MS.gene23060:CDS |
| AATGTGAGATCCTTTGTTGG+CGG | 0.533294 | 7.2:+7237232 | MS.gene23060:CDS |
| GTGGGGAAATTGAACGGTGG+TGG | 0.533876 | 7.2:+7236140 | MS.gene23060:CDS |
| TTCAAAGGAGGATACTCATA+AGG | 0.534931 | 7.2:-7236551 | None:intergenic |
| GGAATAATAATAATGGGTCA+GGG | 0.535516 | 7.2:+7236885 | MS.gene23060:CDS |
| TTGACAAAGGACATCATGTA+AGG | 0.537139 | 7.2:+7238276 | MS.gene23060:CDS |
| GAATGTGAAGCCGCCAACAA+AGG | 0.544205 | 7.2:-7237242 | None:intergenic |
| GGAGAATCCGACACAAACTC+AGG | 0.544748 | 7.2:-7236836 | None:intergenic |
| TCGGATTCTCCAAGGCTCAA+TGG | 0.544952 | 7.2:+7236848 | MS.gene23060:CDS |
| CATGAGGCTTCAAGCACTTG+AGG | 0.547249 | 7.2:+7237090 | MS.gene23060:CDS |
| CCTAGGGAGTTTGGAAATCA+GGG | 0.549475 | 7.2:+7237034 | MS.gene23060:CDS |
| TCAATGGTAGCTTTAGGAAG+AGG | 0.551484 | 7.2:+7236864 | MS.gene23060:CDS |
| CGTCATATTATCACCAGCCT+CGG | 0.554657 | 7.2:-7236942 | None:intergenic |
| GGACAGGGAATCAATGAGGC+AGG | 0.555216 | 7.2:+7237114 | MS.gene23060:CDS |
| AACCCCAACTTATAGTCAGA+TGG | 0.560746 | 7.2:+7236706 | MS.gene23060:CDS |
| ATGTGTTTGGGGAAACTCCA+AGG | 0.561976 | 7.2:+7236639 | MS.gene23060:CDS |
| TCAAGCACTTGAGGCGGACA+GGG | 0.562181 | 7.2:+7237099 | MS.gene23060:CDS |
| GAGGACGTGTCATGACCAGC+AGG | 0.563649 | 7.2:+7236385 | MS.gene23060:CDS |
| AAGGACATCATGTAAGGTCG+TGG | 0.564376 | 7.2:+7238282 | MS.gene23060:CDS |
| ATGTGTGGCTTTACGTGAAG+CGG | 0.564878 | 7.2:+7236196 | MS.gene23060:CDS |
| CACCATGAAATGGAAAAGGT+GGG | 0.566484 | 7.2:+7236122 | None:intergenic |
| AGTTTGTGTCGGATTCTCCA+AGG | 0.567679 | 7.2:+7236840 | MS.gene23060:CDS |
| ACACCATGAAATGGAAAAGG+TGG | 0.568062 | 7.2:+7236121 | None:intergenic |
| GTTTGGCCCTGAGTTTGTGT+CGG | 0.571530 | 7.2:+7236829 | MS.gene23060:CDS |
| GTTCTGAATTGGAAGAGGAA+AGG | 0.572811 | 7.2:+7236252 | MS.gene23060:CDS |
| TGGGAAGAATGTTATAGAGA+AGG | 0.574569 | 7.2:+7236742 | MS.gene23060:CDS |
| CTAAAGCTAAAAGCTCCTGC+TGG | 0.583273 | 7.2:-7236400 | None:intergenic |
| TTACATGATGTCCTTTGTCA+AGG | 0.584012 | 7.2:-7238274 | None:intergenic |
| CCAACTTATAGTCAGATGGA+TGG | 0.584768 | 7.2:+7236710 | MS.gene23060:CDS |
| GGGCTACCATCTAGCAACAC+TGG | 0.588233 | 7.2:+7238239 | MS.gene23060:CDS |
| CCCTGATTTCCAAACTCCCT+AGG | 0.591505 | 7.2:-7237034 | None:intergenic |
| GAAAAGGTGGGGAAATTGAA+CGG | 0.592525 | 7.2:+7236134 | MS.gene23060:CDS |
| ATTACATTACATTTCAAAGG+AGG | 0.595172 | 7.2:-7236563 | None:intergenic |
| ATCCATCTGACTATAAGTTG+GGG | 0.600695 | 7.2:-7236708 | None:intergenic |
| AAAGGAGGATACTCATAAGG+TGG | 0.605904 | 7.2:-7236548 | None:intergenic |
| TGAATATGTAACAACTCCTA+GGG | 0.605927 | 7.2:+7237018 | MS.gene23060:CDS |
| AACTTATAGTCAGATGGATG+GGG | 0.607336 | 7.2:+7236712 | MS.gene23060:CDS |
| GAATAATAATAATGGGTCAG+GGG | 0.608186 | 7.2:+7236886 | MS.gene23060:CDS |
| AAGGAACGCTGCTTCGTCCG+CGG | 0.613406 | 7.2:+7236271 | MS.gene23060:CDS |
| ACCATGAAATGGAAAAGGTG+GGG | 0.614402 | 7.2:+7236123 | None:intergenic |
| ATTGACTCTGAATTCAAAAG+CGG | 0.615809 | 7.2:+7236980 | MS.gene23060:CDS |
| TGTTCGCGTTGAAATTGGGG+AGG | 0.616199 | 7.2:+7236172 | MS.gene23060:CDS |
| ATTGTTTCCTGGAGAAAGAG+AGG | 0.622679 | 7.2:+7237440 | MS.gene23060:CDS |
| TTATGGCTTGACTGAGTCAG+AGG | 0.625650 | 7.2:+7236502 | MS.gene23060:CDS |
| TTACTAATGCTCCTTGACAA+AGG | 0.626578 | 7.2:+7238263 | MS.gene23060:CDS |
| TGAAATTGGGGAGGAATGTG+TGG | 0.627744 | 7.2:+7236181 | MS.gene23060:CDS |
| ATGTAAAGAAGCTTTACATG+AGG | 0.629070 | 7.2:+7237074 | MS.gene23060:CDS |
| ATTGAGATTGCAGACTGAGA+AGG | 0.630429 | 7.2:+7236316 | MS.gene23060:CDS |
| CGAGGCTGGTGATAATATGA+CGG | 0.632376 | 7.2:+7236943 | MS.gene23060:CDS |
| TGTTGAGAAGTATGTGTTTG+GGG | 0.637549 | 7.2:+7236628 | MS.gene23060:CDS |
| GAAGGTAGATAATTTGTCCG+AGG | 0.640933 | 7.2:+7236925 | MS.gene23060:CDS |
| TGTGTTTGGGGAAACTCCAA+GGG | 0.642552 | 7.2:+7236640 | MS.gene23060:CDS |
| ACATATTCATCAAAAGCACC+AGG | 0.644085 | 7.2:-7237004 | None:intergenic |
| GAGAATCCGACACAAACTCA+GGG | 0.656277 | 7.2:-7236835 | None:intergenic |
| TAATGTAATGCATGTTTCTG+CGG | 0.660930 | 7.2:+7236577 | MS.gene23060:CDS |
| CGACATTGTTTCATTCGCCG+CGG | 0.664931 | 7.2:-7236288 | None:intergenic |
| AGGCGGACAGGGAATCAATG+AGG | 0.683449 | 7.2:+7237110 | MS.gene23060:CDS |
| ACTGAGTCAGAGGTAGAAGG+TGG | 0.685416 | 7.2:+7236512 | MS.gene23060:CDS |
| GAGGCTTCAAGCACTTGAGG+CGG | 0.691923 | 7.2:+7237093 | MS.gene23060:CDS |
| AAGGTGGGGAAATTGAACGG+TGG | 0.706112 | 7.2:+7236137 | MS.gene23060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAACATGTATAATATCAT+AGG | - | chr7.2:7237718-7237737 | None:intergenic | 15.0% |
| !!! | ACTAATTTTTTAAGAGATTA+TGG | - | chr7.2:7237776-7237795 | None:intergenic | 15.0% |
| !!! | TAATGGATAATTAATTTCAA+GGG | + | chr7.2:7237819-7237838 | MS.gene23060:intron | 15.0% |
| !! | AATGGATAATTAATTTCAAG+GGG | + | chr7.2:7237820-7237839 | MS.gene23060:intron | 20.0% |
| !! | ATTATCTACCTTCTTAAAAT+TGG | - | chr7.2:7236918-7236937 | None:intergenic | 20.0% |
| !! | GAAATTAATTATCCATTACT+TGG | - | chr7.2:7237817-7237836 | None:intergenic | 20.0% |
| !!! | AAACTATTGTTTTCTTTCAA+TGG | - | chr7.2:7237605-7237624 | None:intergenic | 20.0% |
| !!! | AAATCTGTTATTGATTTTAG+TGG | + | chr7.2:7237847-7237866 | MS.gene23060:intron | 20.0% |
| !!! | GTAATGGATAATTAATTTCA+AGG | + | chr7.2:7237818-7237837 | MS.gene23060:intron | 20.0% |
| ! | AGAGGAATTGTTGTATAAAA+GGG | + | chr7.2:7236421-7236440 | MS.gene23060:CDS | 25.0% |
| ! | AGGAAGAGGAATAATAATAA+TGG | + | chr7.2:7236878-7236897 | MS.gene23060:CDS | 25.0% |
| ! | ATAGAAAATGTTTGTTTGAG+AGG | - | chr7.2:7237987-7238006 | None:intergenic | 25.0% |
| ! | ATATGTTTCAAGAATGCAAT+TGG | + | chr7.2:7238307-7238326 | MS.gene23060:CDS | 25.0% |
| ! | ATCTAAGCATATCCTTATAT+TGG | + | chr7.2:7237961-7237980 | MS.gene23060:intron | 25.0% |
| ! | ATGATGCATTGAAATTTCAT+AGG | - | chr7.2:7237695-7237714 | None:intergenic | 25.0% |
| ! | ATGGATAATTAATTTCAAGG+GGG | + | chr7.2:7237821-7237840 | MS.gene23060:intron | 25.0% |
| ! | ATGTAAAGCTTCTTTACATA+AGG | - | chr7.2:7237073-7237092 | None:intergenic | 25.0% |
| ! | ATTACATTACATTTCAAAGG+AGG | - | chr7.2:7236566-7236585 | None:intergenic | 25.0% |
| ! | GGAAGAGGAATAATAATAAT+GGG | + | chr7.2:7236879-7236898 | MS.gene23060:CDS | 25.0% |
| ! | TAAGGTAATTTAATTGCAGA+TGG | + | chr7.2:7237276-7237295 | MS.gene23060:intron | 25.0% |
| ! | TAGAGGAATTGTTGTATAAA+AGG | + | chr7.2:7236420-7236439 | MS.gene23060:CDS | 25.0% |
| ! | TATGTTTCAAGAATGCAATT+GGG | + | chr7.2:7238308-7238327 | MS.gene23060:CDS | 25.0% |
| ! | TGCATTACATTACATTTCAA+AGG | - | chr7.2:7236569-7236588 | None:intergenic | 25.0% |
| !! | AGTCTTTGTTTCAAAATGTA+TGG | + | chr7.2:7237494-7237513 | MS.gene23060:intron | 25.0% |
| !! | TGAAACAGAATAAGTATTGT+TGG | - | chr7.2:7237390-7237409 | None:intergenic | 25.0% |
| !! | TGTTTTCTTTCAATGGTTTA+TGG | - | chr7.2:7237598-7237617 | None:intergenic | 25.0% |
| !!! | ACAATTTAAACGTTTTGTTG+AGG | + | chr7.2:7236361-7236380 | MS.gene23060:CDS | 25.0% |
| !!! | TATTGATTTTAGTGGAGAAA+TGG | + | chr7.2:7237855-7237874 | MS.gene23060:intron | 25.0% |
| ATGAATATGTAACAACTCCT+AGG | + | chr7.2:7237017-7237036 | MS.gene23060:CDS | 30.0% | |
| ATGTAAAGAAGCTTTACATG+AGG | + | chr7.2:7237074-7237093 | MS.gene23060:CDS | 30.0% | |
| CAGGCAATCTATATTTCTTA+AGG | + | chr7.2:7237658-7237677 | MS.gene23060:intron | 30.0% | |
| CTTAAGAAATATAGATTGCC+TGG | - | chr7.2:7237660-7237679 | None:intergenic | 30.0% | |
| GGAGAATAGAATATCTCAAA+TGG | + | chr7.2:7236679-7236698 | MS.gene23060:CDS | 30.0% | |
| TGAATATGTAACAACTCCTA+GGG | + | chr7.2:7237018-7237037 | MS.gene23060:CDS | 30.0% | |
| TTGTATCTAGCAACTATGAT+AGG | + | chr7.2:7238026-7238045 | MS.gene23060:intron | 30.0% | |
| TTTCCTATAGTGAGTTTAGA+GGG | + | chr7.2:7238111-7238130 | MS.gene23060:intron | 30.0% | |
| ! | ATCTTTCTTTTGTGTACAGT+GGG | + | chr7.2:7237409-7237428 | MS.gene23060:intron | 30.0% |
| ! | ATGTTGAGAAGTATGTGTTT+GGG | + | chr7.2:7236627-7236646 | MS.gene23060:CDS | 30.0% |
| ! | ATTGACTCTGAATTCAAAAG+CGG | + | chr7.2:7236980-7236999 | MS.gene23060:CDS | 30.0% |
| ! | CACATTCTTCACAGTTTTTA+AGG | + | chr7.2:7237258-7237277 | MS.gene23060:CDS | 30.0% |
| ! | GAAATGGTGATTACTGATTA+AGG | + | chr7.2:7237871-7237890 | MS.gene23060:intron | 30.0% |
| ! | TAATGTAATGCATGTTTCTG+CGG | + | chr7.2:7236577-7236596 | MS.gene23060:CDS | 30.0% |
| ! | TCAAGATTTGTGTTCTGAAT+TGG | + | chr7.2:7236241-7236260 | MS.gene23060:CDS | 30.0% |
| ! | TTTTCCTATAGTGAGTTTAG+AGG | + | chr7.2:7238110-7238129 | MS.gene23060:intron | 30.0% |
| !! | AGGAATAATAATAATGGGTC+AGG | + | chr7.2:7236884-7236903 | MS.gene23060:CDS | 30.0% |
| !! | GAATAATAATAATGGGTCAG+GGG | + | chr7.2:7236886-7236905 | MS.gene23060:CDS | 30.0% |
| !! | GGAATAATAATAATGGGTCA+GGG | + | chr7.2:7236885-7236904 | MS.gene23060:CDS | 30.0% |
| !! | GGATTTCTCCAATTTTAAGA+AGG | + | chr7.2:7236907-7236926 | MS.gene23060:CDS | 30.0% |
| !! | TTTTACTGATAATGCATACC+AGG | + | chr7.2:7237639-7237658 | MS.gene23060:intron | 30.0% |
| AACTTATAGTCAGATGGATG+GGG | + | chr7.2:7236712-7236731 | MS.gene23060:CDS | 35.0% | |
| AAGCATAGAATGCTGAGTTA+TGG | + | chr7.2:7236485-7236504 | MS.gene23060:CDS | 35.0% | |
| AATCATCTCAATCGAACCTT+GGG | - | chr7.2:7237344-7237363 | None:intergenic | 35.0% | |
| AATTTAATTGCAGATGGTGC+AGG | + | chr7.2:7237282-7237301 | MS.gene23060:intron | 35.0% | |
| ACATTAACTCTCTTCTGTTC+TGG | - | chr7.2:7237217-7237236 | None:intergenic | 35.0% | |
| ACTACTTATCATACTAGGTG+AGG | - | chr7.2:7237521-7237540 | None:intergenic | 35.0% | |
| AGCTGACTACTTATCATACT+AGG | - | chr7.2:7237526-7237545 | None:intergenic | 35.0% | |
| ATCCATCTGACTATAAGTTG+GGG | - | chr7.2:7236711-7236730 | None:intergenic | 35.0% | |
| CAAAACAAGCTGTGCTTTAT+CGG | - | chr7.2:7237158-7237177 | None:intergenic | 35.0% | |
| CAAATCAAGTAAGTAGTCAG+TGG | + | chr7.2:7237467-7237486 | MS.gene23060:intron | 35.0% | |
| CAACTTATAGTCAGATGGAT+GGG | + | chr7.2:7236711-7236730 | MS.gene23060:CDS | 35.0% | |
| CATCCATCTGACTATAAGTT+GGG | - | chr7.2:7236712-7236731 | None:intergenic | 35.0% | |
| CTAGTACGAATAAACATTCG+AGG | + | chr7.2:7236783-7236802 | MS.gene23060:CDS | 35.0% | |
| CTCGAATGTTTATTCGTACT+AGG | - | chr7.2:7236785-7236804 | None:intergenic | 35.0% | |
| GAATACTGACACAGTTTCTA+TGG | + | chr7.2:7237903-7237922 | MS.gene23060:intron | 35.0% | |
| GTGACTGTAGGTATATGTTT+GGG | + | chr7.2:7238219-7238238 | MS.gene23060:intron | 35.0% | |
| GTTAATGTGAGATCCTTTGT+TGG | + | chr7.2:7237229-7237248 | MS.gene23060:CDS | 35.0% | |
| GTTATAGAGAAGGTGATAGT+TGG | + | chr7.2:7236752-7236771 | MS.gene23060:CDS | 35.0% | |
| TGGGAAGAATGTTATAGAGA+AGG | + | chr7.2:7236742-7236761 | MS.gene23060:CDS | 35.0% | |
| TGTGACTGTAGGTATATGTT+TGG | + | chr7.2:7238218-7238237 | MS.gene23060:intron | 35.0% | |
| TTACATGATGTCCTTTGTCA+AGG | - | chr7.2:7238277-7238296 | None:intergenic | 35.0% | |
| TTACTAATGCTCCTTGACAA+AGG | + | chr7.2:7238263-7238282 | MS.gene23060:CDS | 35.0% | |
| TTCAAAGGAGGATACTCATA+AGG | - | chr7.2:7236554-7236573 | None:intergenic | 35.0% | |
| TTGACAAAGGACATCATGTA+AGG | + | chr7.2:7238276-7238295 | MS.gene23060:CDS | 35.0% | |
| TTGTTTGAGAGGCCAATATA+AGG | - | chr7.2:7237976-7237995 | None:intergenic | 35.0% | |
| ! | AGTTTCTATGGAATGCCTTT+TGG | + | chr7.2:7237915-7237934 | MS.gene23060:intron | 35.0% |
| ! | CATCTTTCTTTTGTGTACAG+TGG | + | chr7.2:7237408-7237427 | MS.gene23060:intron | 35.0% |
| ! | GATGTTGAGAAGTATGTGTT+TGG | + | chr7.2:7236626-7236645 | MS.gene23060:CDS | 35.0% |
| ! | TGTTGAGAAGTATGTGTTTG+GGG | + | chr7.2:7236628-7236647 | MS.gene23060:CDS | 35.0% |
| ! | TTTGTGTTCTGAATTGGAAG+AGG | + | chr7.2:7236247-7236266 | MS.gene23060:CDS | 35.0% |
| !! | ACATATTCATCAAAAGCACC+AGG | - | chr7.2:7237007-7237026 | None:intergenic | 35.0% |
| !! | TTAAACGTTTTGTTGAGGAG+AGG | + | chr7.2:7236366-7236385 | MS.gene23060:CDS | 35.0% |
| AAAGGAGGATACTCATAAGG+TGG | - | chr7.2:7236551-7236570 | None:intergenic | 40.0% | |
| AAATTCCTCAAACGATCCCT+TGG | - | chr7.2:7236659-7236678 | None:intergenic | 40.0% | |
| AACCCCAACTTATAGTCAGA+TGG | + | chr7.2:7236706-7236725 | MS.gene23060:CDS | 40.0% | |
| AAGGGATCGTTTGAGGAATT+TGG | + | chr7.2:7236658-7236677 | MS.gene23060:CDS | 40.0% | |
| AATGTGAGATCCTTTGTTGG+CGG | + | chr7.2:7237232-7237251 | MS.gene23060:CDS | 40.0% | |
| AGATGGATGGGGATTTCAAT+GGG | + | chr7.2:7236723-7236742 | MS.gene23060:CDS | 40.0% | |
| ATTGAGATTGCAGACTGAGA+AGG | + | chr7.2:7236316-7236335 | MS.gene23060:CDS | 40.0% | |
| ATTGTTTCCTGGAGAAAGAG+AGG | + | chr7.2:7237440-7237459 | MS.gene23060:CDS | 40.0% | |
| CAATCATCTCAATCGAACCT+TGG | - | chr7.2:7237345-7237364 | None:intergenic | 40.0% | |
| CCAACTTATAGTCAGATGGA+TGG | + | chr7.2:7236710-7236729 | MS.gene23060:CDS | 40.0% | |
| CCATCCATCTGACTATAAGT+TGG | - | chr7.2:7236713-7236732 | None:intergenic | 40.0% | |
| GAAAAGGTGGGGAAATTGAA+CGG | + | chr7.2:7236134-7236153 | MS.gene23060:CDS | 40.0% | |
| GTACCCTCTAAACTCACTAT+AGG | - | chr7.2:7238117-7238136 | None:intergenic | 40.0% | |
| TACACGTTAGTCAGTCCAAA+AGG | - | chr7.2:7237933-7237952 | None:intergenic | 40.0% | |
| TCTGAACTCATTGTGACTGT+AGG | + | chr7.2:7238207-7238226 | MS.gene23060:intron | 40.0% | |
| TTCACTTACGTGTGAAGTTC+AGG | + | chr7.2:7236457-7236476 | MS.gene23060:CDS | 40.0% | |
| TTTGCAGCAATGCCAAGTAA+TGG | + | chr7.2:7237802-7237821 | MS.gene23060:intron | 40.0% | |
| ! | GAAGGTAGATAATTTGTCCG+AGG | + | chr7.2:7236925-7236944 | MS.gene23060:CDS | 40.0% |
| ! | GTTCTGAATTGGAAGAGGAA+AGG | + | chr7.2:7236252-7236271 | MS.gene23060:CDS | 40.0% |
| !! | TCAATGGTAGCTTTAGGAAG+AGG | + | chr7.2:7236864-7236883 | MS.gene23060:CDS | 40.0% |
| !!! | GCTTGCTCTCTTTTTTTCAC+AGG | - | chr7.2:7238157-7238176 | None:intergenic | 40.0% |
| AAACTCCAAGGGATCGTTTG+AGG | + | chr7.2:7236651-7236670 | MS.gene23060:CDS | 45.0% | |
| AAGGACATCATGTAAGGTCG+TGG | + | chr7.2:7238282-7238301 | MS.gene23060:CDS | 45.0% | |
| AGTTTGTGTCGGATTCTCCA+AGG | + | chr7.2:7236840-7236859 | MS.gene23060:CDS | 45.0% | |
| ATGTGTTTGGGGAAACTCCA+AGG | + | chr7.2:7236639-7236658 | MS.gene23060:CDS | 45.0% | |
| CAAGGCTCAATGGTAGCTTT+AGG | + | chr7.2:7236858-7236877 | MS.gene23060:CDS | 45.0% | |
| CAGATGGATGGGGATTTCAA+TGG | + | chr7.2:7236722-7236741 | MS.gene23060:CDS | 45.0% | |
| CCTAGGGAGTTTGGAAATCA+GGG | + | chr7.2:7237034-7237053 | MS.gene23060:CDS | 45.0% | |
| CGAACCTTGGGCTGAAAAAT+GGG | - | chr7.2:7237332-7237351 | None:intergenic | 45.0% | |
| CGAGGCTGGTGATAATATGA+CGG | + | chr7.2:7236943-7236962 | MS.gene23060:CDS | 45.0% | |
| CGTCATATTATCACCAGCCT+CGG | - | chr7.2:7236945-7236964 | None:intergenic | 45.0% | |
| CGTTGTTCGCGTTGAAATTG+GGG | + | chr7.2:7236169-7236188 | MS.gene23060:CDS | 45.0% | |
| CTAAAGCTAAAAGCTCCTGC+TGG | - | chr7.2:7236403-7236422 | None:intergenic | 45.0% | |
| CTAAAGCTACCATTGAGCCT+TGG | - | chr7.2:7236860-7236879 | None:intergenic | 45.0% | |
| GAGAATCCGACACAAACTCA+GGG | - | chr7.2:7236838-7236857 | None:intergenic | 45.0% | |
| GCGTTGTTCGCGTTGAAATT+GGG | + | chr7.2:7236168-7236187 | MS.gene23060:CDS | 45.0% | |
| GGACTGACTAACGTGTACAA+TGG | + | chr7.2:7237936-7237955 | MS.gene23060:intron | 45.0% | |
| GTAACAACTCCTAGGGAGTT+TGG | + | chr7.2:7237025-7237044 | MS.gene23060:CDS | 45.0% | |
| TCCTAGGGAGTTTGGAAATC+AGG | + | chr7.2:7237033-7237052 | MS.gene23060:CDS | 45.0% | |
| TCGAACCTTGGGCTGAAAAA+TGG | - | chr7.2:7237333-7237352 | None:intergenic | 45.0% | |
| TCTGAATTCAAAAGCGGACC+TGG | + | chr7.2:7236986-7237005 | MS.gene23060:CDS | 45.0% | |
| TGAAATTGGGGAGGAATGTG+TGG | + | chr7.2:7236181-7236200 | MS.gene23060:CDS | 45.0% | |
| TGTGTTTGGGGAAACTCCAA+GGG | + | chr7.2:7236640-7236659 | MS.gene23060:CDS | 45.0% | |
| TTATGGCTTGACTGAGTCAG+AGG | + | chr7.2:7236502-7236521 | MS.gene23060:CDS | 45.0% | |
| TTGACTGAGTCAGAGGTAGA+AGG | + | chr7.2:7236509-7236528 | MS.gene23060:CDS | 45.0% | |
| ! | AAATTGAACGGTGGTGGTGA+TGG | + | chr7.2:7236146-7236165 | MS.gene23060:CDS | 45.0% |
| ! | AGTAAGCCAGTGTTGCTAGA+TGG | - | chr7.2:7238248-7238267 | None:intergenic | 45.0% |
| ! | ATGTGTGGCTTTACGTGAAG+CGG | + | chr7.2:7236196-7236215 | MS.gene23060:CDS | 45.0% |
| ! | GTAGATAATTTGTCCGAGGC+TGG | + | chr7.2:7236929-7236948 | MS.gene23060:CDS | 45.0% |
| ! | TTGATGACCTCTCTTTCTCC+AGG | - | chr7.2:7237450-7237469 | None:intergenic | 45.0% |
| !! | TTTGCCCATTTTTCAGCCCA+AGG | + | chr7.2:7237325-7237344 | MS.gene23060:intron | 45.0% |
| !!! | AGCACAGCTTGTTTTGCTCA+AGG | + | chr7.2:7237162-7237181 | MS.gene23060:CDS | 45.0% |
| !!! | GCAGGAGCTTTTAGCTTTAG+AGG | + | chr7.2:7236403-7236422 | MS.gene23060:CDS | 45.0% |
| AAGGTGGGGAAATTGAACGG+TGG | + | chr7.2:7236137-7236156 | MS.gene23060:CDS | 50.0% | |
| ACTGAGTCAGAGGTAGAAGG+TGG | + | chr7.2:7236512-7236531 | MS.gene23060:CDS | 50.0% | |
| CATGAGGCTTCAAGCACTTG+AGG | + | chr7.2:7237090-7237109 | MS.gene23060:CDS | 50.0% | |
| CCCTGATTTCCAAACTCCCT+AGG | - | chr7.2:7237037-7237056 | None:intergenic | 50.0% | |
| CGACATTGTTTCATTCGCCG+CGG | - | chr7.2:7236291-7236310 | None:intergenic | 50.0% | |
| GAATGTGAAGCCGCCAACAA+AGG | - | chr7.2:7237245-7237264 | None:intergenic | 50.0% | |
| GGAGAATCCGACACAAACTC+AGG | - | chr7.2:7236839-7236858 | None:intergenic | 50.0% | |
| GGCGTTGTTCGCGTTGAAAT+TGG | + | chr7.2:7236167-7236186 | MS.gene23060:CDS | 50.0% | |
| GTTTGGCCCTGAGTTTGTGT+CGG | + | chr7.2:7236829-7236848 | MS.gene23060:CDS | 50.0% | |
| TCATGTGACTCGTCGTCGTT+TGG | + | chr7.2:7236812-7236831 | MS.gene23060:CDS | 50.0% | |
| TCGGATTCTCCAAGGCTCAA+TGG | + | chr7.2:7236848-7236867 | MS.gene23060:CDS | 50.0% | |
| TGAGAAGGCTGAGCTTGAGA+TGG | + | chr7.2:7236331-7236350 | MS.gene23060:CDS | 50.0% | |
| TGTTCGCGTTGAAATTGGGG+AGG | + | chr7.2:7236172-7236191 | MS.gene23060:CDS | 50.0% | |
| !! | GGGTTGCATCGATTGTTTCC+TGG | + | chr7.2:7237429-7237448 | MS.gene23060:CDS | 50.0% |
| AGGCGGACAGGGAATCAATG+AGG | + | chr7.2:7237110-7237129 | MS.gene23060:CDS | 55.0% | |
| GAGGCTTCAAGCACTTGAGG+CGG | + | chr7.2:7237093-7237112 | MS.gene23060:CDS | 55.0% | |
| GGACAGGGAATCAATGAGGC+AGG | + | chr7.2:7237114-7237133 | MS.gene23060:CDS | 55.0% | |
| GGGCTACCATCTAGCAACAC+TGG | + | chr7.2:7238239-7238258 | MS.gene23060:CDS | 55.0% | |
| GTGGGGAAATTGAACGGTGG+TGG | + | chr7.2:7236140-7236159 | MS.gene23060:CDS | 55.0% | |
| TCAAGCACTTGAGGCGGACA+GGG | + | chr7.2:7237099-7237118 | MS.gene23060:CDS | 55.0% | |
| TTCAAGCACTTGAGGCGGAC+AGG | + | chr7.2:7237098-7237117 | MS.gene23060:CDS | 55.0% | |
| AAGGAACGCTGCTTCGTCCG+CGG | + | chr7.2:7236271-7236290 | MS.gene23060:CDS | 60.0% | |
| GAGGACGTGTCATGACCAGC+AGG | + | chr7.2:7236385-7236404 | MS.gene23060:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 7236131 | 7238337 | 7236131 | ID=MS.gene23060 |
| chr7.2 | mRNA | 7236131 | 7238337 | 7236131 | ID=MS.gene23060.t1;Parent=MS.gene23060 |
| chr7.2 | exon | 7236131 | 7237279 | 7236131 | ID=MS.gene23060.t1.exon1;Parent=MS.gene23060.t1 |
| chr7.2 | CDS | 7236131 | 7237279 | 7236131 | ID=cds.MS.gene23060.t1;Parent=MS.gene23060.t1 |
| chr7.2 | exon | 7237428 | 7237474 | 7237428 | ID=MS.gene23060.t1.exon2;Parent=MS.gene23060.t1 |
| chr7.2 | CDS | 7237428 | 7237474 | 7237428 | ID=cds.MS.gene23060.t1;Parent=MS.gene23060.t1 |
| chr7.2 | exon | 7238229 | 7238337 | 7238229 | ID=MS.gene23060.t1.exon3;Parent=MS.gene23060.t1 |
| chr7.2 | CDS | 7238229 | 7238337 | 7238229 | ID=cds.MS.gene23060.t1;Parent=MS.gene23060.t1 |
| Gene Sequence |
| Protein sequence |
