Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27569.t1 | XP_003623729.1 | 98.4 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 2.00E-212 | 748 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27569.t1 | Q42800 | 87.5 | 327 | 41 | 0 | 40 | 366 | 6 | 332 | 2.3e-172 | 606.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27569.t1 | G7L0A3 | 98.4 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 1.4e-212 | 748.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene27569 | 0.855372 | 6.60E-62 | -1.69E-46 |
| MS.gene049341 | MS.gene27569 | 0.807071 | 6.05E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene27569 | 0.81454 | 1.46E-51 | -1.69E-46 |
| MS.gene049711 | MS.gene27569 | 0.814894 | 1.22E-51 | -1.69E-46 |
| MS.gene049821 | MS.gene27569 | 0.808274 | 3.36E-50 | -1.69E-46 |
| MS.gene049824 | MS.gene27569 | 0.832055 | 1.18E-55 | -1.69E-46 |
| MS.gene049825 | MS.gene27569 | 0.820021 | 8.55E-53 | -1.69E-46 |
| MS.gene049850 | MS.gene27569 | 0.806686 | 7.29E-50 | -1.69E-46 |
| MS.gene049873 | MS.gene27569 | 0.823385 | 1.43E-53 | -1.69E-46 |
| MS.gene050020 | MS.gene27569 | 0.807605 | 4.66E-50 | -1.69E-46 |
| MS.gene05016 | MS.gene27569 | 0.805148 | 1.54E-49 | -1.69E-46 |
| MS.gene05045 | MS.gene27569 | 0.823699 | 1.20E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene27569 | 0.827937 | 1.19E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene27569 | 0.827215 | 1.77E-54 | -1.69E-46 |
| MS.gene050562 | MS.gene27569 | 0.804947 | 1.69E-49 | -1.69E-46 |
| MS.gene050780 | MS.gene27569 | 0.813387 | 2.63E-51 | -1.69E-46 |
| MS.gene050807 | MS.gene27569 | 0.814943 | 1.19E-51 | -1.69E-46 |
| MS.gene050901 | MS.gene27569 | 0.802219 | 6.22E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene27569 | 0.840306 | 9.41E-58 | -1.69E-46 |
| MS.gene051279 | MS.gene27569 | 0.805533 | 1.28E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene27569 | 0.814531 | 1.47E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene27569 | 0.805577 | 1.25E-49 | -1.69E-46 |
| MS.gene051700 | MS.gene27569 | 0.80059 | 1.34E-48 | -1.69E-46 |
| MS.gene051719 | MS.gene27569 | 0.843617 | 1.26E-58 | -1.69E-46 |
| MS.gene051720 | MS.gene27569 | 0.840193 | 1.01E-57 | -1.69E-46 |
| MS.gene051744 | MS.gene27569 | 0.887941 | 9.16E-73 | -1.69E-46 |
| MS.gene051791 | MS.gene27569 | 0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene051957 | MS.gene27569 | 0.813528 | 2.45E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene27569 | 0.813205 | 2.88E-51 | -1.69E-46 |
| MS.gene052133 | MS.gene27569 | 0.830067 | 3.62E-55 | -1.69E-46 |
| MS.gene052516 | MS.gene27569 | 0.829971 | 3.82E-55 | -1.69E-46 |
| MS.gene052582 | MS.gene27569 | 0.802465 | 5.54E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene27569 | 0.818694 | 1.71E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene27569 | 0.815005 | 1.15E-51 | -1.69E-46 |
| MS.gene052732 | MS.gene27569 | 0.802188 | 6.32E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene27569 | 0.83189 | 1.29E-55 | -1.69E-46 |
| MS.gene053174 | MS.gene27569 | 0.805446 | 1.33E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene27569 | 0.854094 | 1.55E-61 | -1.69E-46 |
| MS.gene053581 | MS.gene27569 | 0.80541 | 1.35E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene27569 | 0.824044 | 9.99E-54 | -1.69E-46 |
| MS.gene053995 | MS.gene27569 | 0.801214 | 1.00E-48 | -1.69E-46 |
| MS.gene053998 | MS.gene27569 | 0.808488 | 3.02E-50 | -1.69E-46 |
| MS.gene054550 | MS.gene27569 | 0.800543 | 1.37E-48 | -1.69E-46 |
| MS.gene054576 | MS.gene27569 | 0.804287 | 2.32E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene27569 | 0.838224 | 3.27E-57 | -1.69E-46 |
| MS.gene054651 | MS.gene27569 | 0.80776 | 4.32E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene27569 | 0.81574 | 7.92E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene27569 | 0.821704 | 3.50E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene27569 | 0.803229 | 3.85E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene27569 | 0.818933 | 1.51E-52 | -1.69E-46 |
| MS.gene055537 | MS.gene27569 | 0.819567 | 1.09E-52 | -1.69E-46 |
| MS.gene055580 | MS.gene27569 | -0.829024 | 6.49E-55 | -1.69E-46 |
| MS.gene055778 | MS.gene27569 | 0.834771 | 2.47E-56 | -1.69E-46 |
| MS.gene055808 | MS.gene27569 | 0.813573 | 2.39E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene27569 | 0.8074 | 5.15E-50 | -1.69E-46 |
| MS.gene055890 | MS.gene27569 | 0.822423 | 2.39E-53 | -1.69E-46 |
| MS.gene055891 | MS.gene27569 | 0.807403 | 5.14E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene27569 | 0.809573 | 1.77E-50 | -1.69E-46 |
| MS.gene056215 | MS.gene27569 | 0.801466 | 8.89E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene27569 | 0.837076 | 6.44E-57 | -1.69E-46 |
| MS.gene056545 | MS.gene27569 | 0.803934 | 2.75E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene27569 | 0.833779 | 4.38E-56 | -1.69E-46 |
| MS.gene057314 | MS.gene27569 | 0.816192 | 6.28E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene27569 | 0.816841 | 4.49E-52 | -1.69E-46 |
| MS.gene05847 | MS.gene27569 | 0.806534 | 7.85E-50 | -1.69E-46 |
| MS.gene059015 | MS.gene27569 | 0.83985 | 1.24E-57 | -1.69E-46 |
| MS.gene059154 | MS.gene27569 | 0.80357 | 3.27E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene27569 | 0.808261 | 3.38E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene27569 | 0.808752 | 2.65E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene27569 | 0.803399 | 3.55E-49 | -1.69E-46 |
| MS.gene06001 | MS.gene27569 | 0.803746 | 3.01E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene27569 | 0.803084 | 4.13E-49 | -1.69E-46 |
| MS.gene060355 | MS.gene27569 | 0.803972 | 2.70E-49 | -1.69E-46 |
| MS.gene060429 | MS.gene27569 | 0.835263 | 1.86E-56 | -1.69E-46 |
| MS.gene060519 | MS.gene27569 | 0.815025 | 1.14E-51 | -1.69E-46 |
| MS.gene060587 | MS.gene27569 | 0.852662 | 3.98E-61 | -1.69E-46 |
| MS.gene061176 | MS.gene27569 | 0.807686 | 4.48E-50 | -1.69E-46 |
| MS.gene061177 | MS.gene27569 | 0.807652 | 4.55E-50 | -1.69E-46 |
| MS.gene061178 | MS.gene27569 | 0.807279 | 5.46E-50 | -1.69E-46 |
| MS.gene061266 | MS.gene27569 | 0.804911 | 1.72E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07198 | MS.gene27569 | PPI |
| MS.gene96090 | MS.gene27569 | PPI |
| MS.gene42158 | MS.gene27569 | PPI |
| MS.gene005617 | MS.gene27569 | PPI |
| MS.gene20715 | MS.gene27569 | PPI |
| MS.gene016221 | MS.gene27569 | PPI |
| MS.gene03038 | MS.gene27569 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27569.t1 | MTR_7g075090 | 98.361 | 366 | 6 | 0 | 1 | 366 | 1 | 366 | 0.0 | 755 |
| MS.gene27569.t1 | MTR_1g088775 | 93.169 | 366 | 25 | 0 | 1 | 366 | 1 | 366 | 0.0 | 725 |
| MS.gene27569.t1 | MTR_8g036040 | 66.667 | 345 | 115 | 0 | 22 | 366 | 14 | 358 | 2.13e-176 | 494 |
| MS.gene27569.t1 | MTR_8g036035 | 63.488 | 367 | 128 | 3 | 1 | 366 | 1 | 362 | 9.14e-166 | 468 |
| MS.gene27569.t1 | MTR_8g036020 | 68.910 | 312 | 96 | 1 | 55 | 366 | 18 | 328 | 4.68e-161 | 454 |
| MS.gene27569.t1 | MTR_8g036050 | 63.782 | 312 | 108 | 1 | 55 | 366 | 1 | 307 | 1.31e-147 | 419 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27569.t1 | AT2G45440 | 74.590 | 366 | 92 | 1 | 1 | 366 | 1 | 365 | 0.0 | 576 |
| MS.gene27569.t1 | AT3G60880 | 73.770 | 366 | 95 | 1 | 1 | 366 | 1 | 365 | 0.0 | 563 |
| MS.gene27569.t1 | AT3G60880 | 73.770 | 366 | 94 | 2 | 1 | 366 | 1 | 364 | 0.0 | 560 |
Find 101 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGGAATATTAAGGTTAT+TGG | 0.186837 | 7.2:-30428942 | MS.gene27569:CDS |
| AAGGATAGAATTTGCCAATT+TGG | 0.190236 | 7.2:-30428346 | MS.gene27569:CDS |
| ACCAATTTCCTTCACCAAAT+TGG | 0.224725 | 7.2:+30428332 | None:intergenic |
| GCCAATTTGGTGAAGGAAAT+TGG | 0.226319 | 7.2:-30428333 | MS.gene27569:CDS |
| ATTAAGGTTATTGGAAATAC+TGG | 0.273517 | 7.2:-30428933 | MS.gene27569:CDS |
| GCGCACACCGTCAACTGTTT+TGG | 0.304655 | 7.2:-30428963 | MS.gene27569:CDS |
| TGTTGCAAGCAATTTGATTC+CGG | 0.308700 | 7.2:-30428547 | MS.gene27569:CDS |
| CATTATTCAGGAACTCTTCC+TGG | 0.320905 | 7.2:-30429766 | MS.gene27569:intron |
| AGCTGCTTGTGTAGGCTTCC+AGG | 0.338802 | 7.2:+30429748 | None:intergenic |
| CTTTCAAAGTGTGCTTTCCA+TGG | 0.342943 | 7.2:-30428790 | MS.gene27569:CDS |
| GCCATTTGTACCTCTCCCTT+TGG | 0.355708 | 7.2:-30428373 | MS.gene27569:CDS |
| CACGATGCTAGATGGGGTTA+TGG | 0.357163 | 7.2:-30428588 | MS.gene27569:CDS |
| TACCTCTCCCTTTGGAGAAA+AGG | 0.366582 | 7.2:-30428365 | MS.gene27569:CDS |
| GTGAAGGCCAACTAATGAAC+TGG | 0.368307 | 7.2:-30429007 | MS.gene27569:CDS |
| GTTGCAAGCAATTTGATTCC+GGG | 0.368402 | 7.2:-30428546 | MS.gene27569:CDS |
| TTAATGCGAGAGCTCATGTT+TGG | 0.368556 | 7.2:-30428522 | MS.gene27569:CDS |
| GTGTTCAAACCAATGGGATT+TGG | 0.372649 | 7.2:+30428438 | None:intergenic |
| AGCTCTTGCCTTTGATTGAC+TGG | 0.378010 | 7.2:-30428473 | MS.gene27569:CDS |
| TAATGCGAGAGCTCATGTTT+GGG | 0.389995 | 7.2:-30428521 | MS.gene27569:CDS |
| ACGATGCTAGATGGGGTTAT+GGG | 0.392947 | 7.2:-30428587 | MS.gene27569:CDS |
| ATGAATGCCACGATGCTAGA+TGG | 0.396310 | 7.2:-30428596 | MS.gene27569:CDS |
| TTGCTCAACTTGGAGTTGTC+AGG | 0.401383 | 7.2:-30428410 | MS.gene27569:CDS |
| AACACGGCTCTTGCTCAACT+TGG | 0.407658 | 7.2:-30428420 | MS.gene27569:CDS |
| GCTCTTCCCAGTTCATTAGT+TGG | 0.415200 | 7.2:+30429000 | None:intergenic |
| GGCTGGTGTCAAGGAATGTA+TGG | 0.417544 | 7.2:-30428679 | MS.gene27569:CDS |
| GCTACATTCAAGACCTATAC+TGG | 0.420080 | 7.2:-30431005 | MS.gene27569:CDS |
| TCATCTCATAACTACGCATT+GGG | 0.424346 | 7.2:+30429705 | None:intergenic |
| AGTTGCATGAATTGCTTCCC+TGG | 0.424932 | 7.2:+30428899 | None:intergenic |
| CTTCATATAAACCCTTACTA+TGG | 0.428403 | 7.2:-30428843 | MS.gene27569:CDS |
| AGATGGGGTTATGGGGCTAC+TGG | 0.429920 | 7.2:-30428579 | MS.gene27569:CDS |
| ACAAATGGCAGCCTGAAAAC+TGG | 0.430651 | 7.2:+30428387 | None:intergenic |
| TTTCAAAGTGTGCTTTCCAT+GGG | 0.432753 | 7.2:-30428789 | MS.gene27569:CDS |
| GGAGTTGAAGGTGTTATTGT+TGG | 0.435948 | 7.2:-30429041 | MS.gene27569:CDS |
| GTTATTGTTGGTGGCACAAC+TGG | 0.447799 | 7.2:-30429029 | MS.gene27569:CDS |
| GCTCAAAGTACTTGCTTGGC+TGG | 0.459949 | 7.2:-30428696 | MS.gene27569:CDS |
| TCATATATAATGTGCCTTCA+CGG | 0.466811 | 7.2:-30428758 | MS.gene27569:CDS |
| AGCAATTCATGCAACTGAGC+AGG | 0.472668 | 7.2:-30428892 | MS.gene27569:CDS |
| CTTAGCTCAAAGTACTTGCT+TGG | 0.473911 | 7.2:-30428700 | MS.gene27569:CDS |
| TTCATCTCATAACTACGCAT+TGG | 0.474360 | 7.2:+30429704 | None:intergenic |
| TATACTGGCGTATGCTTCAC+AGG | 0.477913 | 7.2:-30430990 | MS.gene27569:CDS |
| CAAAACCTCCTTGGAAGGTA+TGG | 0.482290 | 7.2:-30428820 | MS.gene27569:CDS |
| GTTGAAGGTGTTATTGTTGG+TGG | 0.483414 | 7.2:-30429038 | MS.gene27569:CDS |
| TCAAGATCAAATCGACCGTC+AGG | 0.487193 | 7.2:+30429101 | None:intergenic |
| TTACTATGGCAAAACCTCCT+TGG | 0.496884 | 7.2:-30428829 | MS.gene27569:CDS |
| TATAATGTGCCTTCACGGAC+TGG | 0.501920 | 7.2:-30428753 | MS.gene27569:CDS |
| TTGTCAGTGGTAACATTGGA+AGG | 0.502303 | 7.2:+30430948 | None:intergenic |
| GTGAATATGCAGATTGAGAA+TGG | 0.503509 | 7.2:-30429062 | MS.gene27569:CDS |
| GATTTCACAGCTGCTTGTGT+AGG | 0.510543 | 7.2:+30429740 | None:intergenic |
| AACCAATGGGATTTGGCATG+TGG | 0.510972 | 7.2:+30428445 | None:intergenic |
| TACTTGCTTGGCTGGTGTCA+AGG | 0.511271 | 7.2:-30428688 | MS.gene27569:CDS |
| AGGAATGTATGGGAAATGAC+AGG | 0.516838 | 7.2:-30428668 | MS.gene27569:CDS |
| AAGAGCTTAGAATTCAATGT+AGG | 0.522936 | 7.2:+30428489 | None:intergenic |
| TGTTGGAACTGAAGACGTCC+AGG | 0.522988 | 7.2:-30428298 | MS.gene27569:CDS |
| AAGAGCCGTGTTCAAACCAA+TGG | 0.526094 | 7.2:+30428431 | None:intergenic |
| TCCAAAGGGAGAGGTACAAA+TGG | 0.530348 | 7.2:+30428372 | None:intergenic |
| ATTCCCACCAAAACAGTTGA+CGG | 0.533028 | 7.2:+30428956 | None:intergenic |
| AGAATTTGCCAATTTGGTGA+AGG | 0.533742 | 7.2:-30428340 | MS.gene27569:CDS |
| AATCGACCGTCAGGTAGGTA+TGG | 0.533788 | 7.2:+30429110 | None:intergenic |
| GGCACATTATATATGATTGT+GGG | 0.534618 | 7.2:+30428765 | None:intergenic |
| TGTGAAGCATACGCCAGTAT+AGG | 0.536807 | 7.2:+30430992 | None:intergenic |
| AGGCACATTATATATGATTG+TGG | 0.538234 | 7.2:+30428764 | None:intergenic |
| AATGCGAGAGCTCATGTTTG+GGG | 0.539435 | 7.2:-30428520 | MS.gene27569:CDS |
| CAGATTGAGAATGGAGTTGA+AGG | 0.544549 | 7.2:-30429053 | MS.gene27569:CDS |
| TTCCACATGCCAAATCCCAT+TGG | 0.545798 | 7.2:-30428447 | MS.gene27569:CDS |
| TCTTGAATCATATGATGCCT+TGG | 0.551015 | 7.2:-30429084 | MS.gene27569:CDS |
| TGAATGCCACGATGCTAGAT+GGG | 0.551513 | 7.2:-30428595 | MS.gene27569:CDS |
| GCAATTCATGCAACTGAGCA+GGG | 0.554140 | 7.2:-30428891 | MS.gene27569:CDS |
| AGTCGTCGTCATCAAGAACC+TGG | 0.556999 | 7.2:+30428280 | None:intergenic |
| TCTCAGACACTTTATGTCCT+CGG | 0.562351 | 7.2:+30429154 | None:intergenic |
| ATACTGGAAGCAACTCAACC+AGG | 0.563622 | 7.2:-30428917 | MS.gene27569:CDS |
| ACGCATTGGGAGGTGAAAAG+TGG | 0.566127 | 7.2:+30429718 | None:intergenic |
| TATGGCAAAACCTCCTTGGA+AGG | 0.570023 | 7.2:-30428825 | MS.gene27569:CDS |
| TGGAAAAGCCAGTCAATCAA+AGG | 0.572095 | 7.2:+30428465 | None:intergenic |
| AGAGCCGTGTTCAAACCAAT+GGG | 0.577523 | 7.2:+30428432 | None:intergenic |
| ATGAGCTCTCGCATTAAACC+CGG | 0.593075 | 7.2:+30428528 | None:intergenic |
| ATAGAATTGCTGTGTGGAGT+GGG | 0.595797 | 7.2:-30428626 | MS.gene27569:CDS |
| ATATATGATTGTGGGCCCCA+TGG | 0.599404 | 7.2:+30428773 | None:intergenic |
| GTGAGCAACCATACCTTCCA+AGG | 0.605193 | 7.2:+30428812 | None:intergenic |
| CGATGCTAGATGGGGTTATG+GGG | 0.609310 | 7.2:-30428586 | MS.gene27569:CDS |
| TATTTACAGGACTTGTACCG+AGG | 0.611279 | 7.2:-30429171 | MS.gene27569:intron |
| TTCAAAGTGTGCTTTCCATG+GGG | 0.611441 | 7.2:-30428788 | MS.gene27569:CDS |
| ATGCGAGAGCTCATGTTTGG+GGG | 0.614814 | 7.2:-30428519 | MS.gene27569:CDS |
| AAATCCCATTGGTTTGAACA+CGG | 0.620889 | 7.2:-30428436 | MS.gene27569:CDS |
| GGAAGGATGAAGCGGAAAAG+CGG | 0.623856 | 7.2:+30430965 | None:intergenic |
| TGAAGGCCAACTAATGAACT+GGG | 0.625991 | 7.2:-30429006 | MS.gene27569:CDS |
| TACTGGAAGCAACTCAACCA+GGG | 0.628120 | 7.2:-30428916 | MS.gene27569:CDS |
| AATAGAATTGCTGTGTGGAG+TGG | 0.632726 | 7.2:-30428627 | MS.gene27569:CDS |
| CTCAATCTGCATATTCACCA+AGG | 0.638337 | 7.2:+30429067 | None:intergenic |
| GCTGGTGTCAAGGAATGTAT+GGG | 0.645660 | 7.2:-30428678 | MS.gene27569:CDS |
| ATGTCTTGACCAGTCCGTGA+AGG | 0.650374 | 7.2:+30428744 | None:intergenic |
| GTTGGTGGCACAACTGGTGA+AGG | 0.654935 | 7.2:-30429023 | MS.gene27569:CDS |
| GATCAAATCGACCGTCAGGT+AGG | 0.655832 | 7.2:+30429105 | None:intergenic |
| TCTCATAACTACGCATTGGG+AGG | 0.661369 | 7.2:+30429708 | None:intergenic |
| GGAATGTATGGGAAATGACA+GGG | 0.665453 | 7.2:-30428667 | MS.gene27569:CDS |
| TTACCACTGACAAAACCACT+AGG | 0.673289 | 7.2:-30430938 | MS.gene27569:intron |
| AAAACTCCATACCTACCTGA+CGG | 0.675250 | 7.2:-30429116 | MS.gene27569:CDS |
| GTAACATTGGAAGGATGAAG+CGG | 0.682034 | 7.2:+30430957 | None:intergenic |
| AGCAACCATACCTTCCAAGG+AGG | 0.704764 | 7.2:+30428815 | None:intergenic |
| GAATGCCACGATGCTAGATG+GGG | 0.719711 | 7.2:-30428594 | MS.gene27569:CDS |
| CATAACCCCATCTAGCATCG+TGG | 0.731383 | 7.2:+30428589 | None:intergenic |
| CTGATAATAGAATTGCTGTG+TGG | 0.757477 | 7.2:-30428632 | MS.gene27569:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAATTAAGATTGTAA+GGG | - | chr7.2:30429052-30429071 | MS.gene27569:CDS | 10.0% |
| !!! | TTTTTTCAATTAAGATAATA+GGG | - | chr7.2:30428748-30428767 | MS.gene27569:CDS | 10.0% |
| !!! | TTTTTTTAATTAAGATTGTA+AGG | - | chr7.2:30429051-30429070 | MS.gene27569:CDS | 10.0% |
| !!! | TTTTTTTCAATTAAGATAAT+AGG | - | chr7.2:30428747-30428766 | MS.gene27569:CDS | 10.0% |
| !! | ACATTAAACAAACAAAAAAT+TGG | + | chr7.2:30429465-30429484 | None:intergenic | 15.0% |
| !! | TCTGTTTGATAAAAAAATAT+CGG | - | chr7.2:30428867-30428886 | MS.gene27569:CDS | 15.0% |
| !!! | TTTTTCAATTAAGATAATAG+GGG | - | chr7.2:30428749-30428768 | MS.gene27569:CDS | 15.0% |
| !! | AAGCTATATATTGTATTTAC+AGG | - | chr7.2:30430081-30430100 | MS.gene27569:intron | 20.0% |
| !! | TAAGCTTGTATAACTAAAAA+AGG | + | chr7.2:30429200-30429219 | None:intergenic | 20.0% |
| !! | TATGCTTTATATATATTGTG+TGG | - | chr7.2:30429687-30429706 | MS.gene27569:intron | 20.0% |
| !! | TATGGAGTATATTTAAAAAG+TGG | - | chr7.2:30429972-30429991 | MS.gene27569:intron | 20.0% |
| !! | TGGAAAATATAGAATTTAGT+AGG | + | chr7.2:30429637-30429656 | None:intergenic | 20.0% |
| !!! | ATAACTAAAAAAGGTTTGTT+TGG | + | chr7.2:30429191-30429210 | None:intergenic | 20.0% |
| !!! | TATTTTCTTTTTCTGCTATA+AGG | - | chr7.2:30429352-30429371 | MS.gene27569:intron | 20.0% |
| !!! | TTAATACTGATTTTGTGATA+CGG | + | chr7.2:30430059-30430078 | None:intergenic | 20.0% |
| !!! | TTTACACATTGAACATATTT+TGG | - | chr7.2:30429859-30429878 | MS.gene27569:intron | 20.0% |
| ! | AAGACATGTTTATGTATGTT+TGG | + | chr7.2:30429251-30429270 | None:intergenic | 25.0% |
| ! | AATCTCAAACTGAATAATAG+AGG | + | chr7.2:30429894-30429913 | None:intergenic | 25.0% |
| ! | AATGAGACGATTAAAACAAA+TGG | + | chr7.2:30429657-30429676 | None:intergenic | 25.0% |
| ! | AATGATGACAAAACATATTG+GGG | + | chr7.2:30429322-30429341 | None:intergenic | 25.0% |
| ! | AGTAGGAAAACTAATGAATT+TGG | + | chr7.2:30429620-30429639 | None:intergenic | 25.0% |
| ! | ATTAAGGTTATTGGAAATAC+TGG | - | chr7.2:30430332-30430351 | MS.gene27569:intron | 25.0% |
| ! | CAAACAAAAAATTGGATTCA+TGG | + | chr7.2:30429457-30429476 | None:intergenic | 25.0% |
| ! | CAATGATGACAAAACATATT+GGG | + | chr7.2:30429323-30429342 | None:intergenic | 25.0% |
| ! | GTAGTTATGAGATGAAAAAT+AGG | - | chr7.2:30429568-30429587 | MS.gene27569:intron | 25.0% |
| ! | TCAATGATGACAAAACATAT+TGG | + | chr7.2:30429324-30429343 | None:intergenic | 25.0% |
| ! | TTATGAGATGAAAAATAGGT+AGG | - | chr7.2:30429572-30429591 | MS.gene27569:intron | 25.0% |
| !! | GCTGATAATGATAAGTAAAA+TGG | + | chr7.2:30428363-30428382 | None:intergenic | 25.0% |
| !! | GTAGTGTTTTGTAAAATTAG+CGG | - | chr7.2:30428970-30428989 | MS.gene27569:CDS | 25.0% |
| !!! | AGTTAGTTTATAGTTGATAG+CGG | - | chr7.2:30428926-30428945 | MS.gene27569:CDS | 25.0% |
| !!! | GAATTTCTTTTGTTGTTCAT+CGG | - | chr7.2:30428558-30428577 | MS.gene27569:CDS | 25.0% |
| !!! | TAATACTGATTTTGTGATAC+GGG | + | chr7.2:30430058-30430077 | None:intergenic | 25.0% |
| !!! | TGCGTTGATTTGTTAAAAAT+TGG | - | chr7.2:30428511-30428530 | MS.gene27569:CDS | 25.0% |
| !!! | TTTAATCGTCTCATTTTTTC+AGG | - | chr7.2:30429662-30429681 | MS.gene27569:intron | 25.0% |
| AAGAGCTTAGAATTCAATGT+AGG | + | chr7.2:30430779-30430798 | None:intergenic | 30.0% | |
| AAGGATAGAATTTGCCAATT+TGG | - | chr7.2:30430919-30430938 | MS.gene27569:intron | 30.0% | |
| AATGGAAAATTTGAACCTAG+TGG | + | chr7.2:30428345-30428364 | None:intergenic | 30.0% | |
| AGGCACATTATATATGATTG+TGG | + | chr7.2:30430504-30430523 | None:intergenic | 30.0% | |
| ATACACTTGTGAGAAAATGA+TGG | - | chr7.2:30428834-30428853 | MS.gene27569:CDS | 30.0% | |
| ATAGAGGAGATTTAGACAAT+AGG | - | chr7.2:30429826-30429845 | MS.gene27569:intron | 30.0% | |
| ATGATAAGCTATGAGTTACT+TGG | - | chr7.2:30428789-30428808 | MS.gene27569:CDS | 30.0% | |
| ATGTCTTATACTGTGTAGAT+TGG | - | chr7.2:30429712-30429731 | MS.gene27569:CDS | 30.0% | |
| CTTCATATAAACCCTTACTA+TGG | - | chr7.2:30430422-30430441 | MS.gene27569:intron | 30.0% | |
| GGCACATTATATATGATTGT+GGG | + | chr7.2:30430503-30430522 | None:intergenic | 30.0% | |
| TATTGTCTAAATCTCCTCTA+TGG | + | chr7.2:30429827-30429846 | None:intergenic | 30.0% | |
| TCATATATAATGTGCCTTCA+CGG | - | chr7.2:30430507-30430526 | MS.gene27569:intron | 30.0% | |
| TCGAATTTCGCAATTAGTAA+AGG | + | chr7.2:30428538-30428557 | None:intergenic | 30.0% | |
| TGAGAAAATGATGGTTACTA+AGG | - | chr7.2:30428843-30428862 | MS.gene27569:CDS | 30.0% | |
| ! | AATTCTATCCTTTTCTCCAA+AGG | + | chr7.2:30430911-30430930 | None:intergenic | 30.0% |
| ! | ATAAGCTAGCTTATAGAAGA+TGG | - | chr7.2:30428897-30428916 | MS.gene27569:CDS | 30.0% |
| ! | ATTCTATCCTTTTCTCCAAA+GGG | + | chr7.2:30430910-30430929 | None:intergenic | 30.0% |
| ! | CTGATTGAATTTTCAGTGTT+TGG | - | chr7.2:30428658-30428677 | MS.gene27569:CDS | 30.0% |
| AACGTTTGTCTGCATTATTC+AGG | - | chr7.2:30429487-30429506 | MS.gene27569:intron | 35.0% | |
| ACCAATTTCCTTCACCAAAT+TGG | + | chr7.2:30430936-30430955 | None:intergenic | 35.0% | |
| ATACTCCATAAAACATGCAG+TGG | + | chr7.2:30429962-30429981 | None:intergenic | 35.0% | |
| CTGATAATAGAATTGCTGTG+TGG | - | chr7.2:30430633-30430652 | MS.gene27569:intron | 35.0% | |
| CTTATACTGTGTAGATTGGA+GGG | - | chr7.2:30429716-30429735 | MS.gene27569:CDS | 35.0% | |
| CTTTATGAACATTGTCGATG+AGG | - | chr7.2:30428469-30428488 | MS.gene27569:CDS | 35.0% | |
| GGTGGGAATATTAAGGTTAT+TGG | - | chr7.2:30430323-30430342 | MS.gene27569:intron | 35.0% | |
| GTGAATATGCAGATTGAGAA+TGG | - | chr7.2:30430203-30430222 | MS.gene27569:intron | 35.0% | |
| TCATCTCATAACTACGCATT+GGG | + | chr7.2:30429563-30429582 | None:intergenic | 35.0% | |
| TCTTATACTGTGTAGATTGG+AGG | - | chr7.2:30429715-30429734 | MS.gene27569:CDS | 35.0% | |
| TCTTGAATCATATGATGCCT+TGG | - | chr7.2:30430181-30430200 | MS.gene27569:intron | 35.0% | |
| TGTTGCAAGCAATTTGATTC+CGG | - | chr7.2:30430718-30430737 | MS.gene27569:intron | 35.0% | |
| TTCATCTCATAACTACGCAT+TGG | + | chr7.2:30429564-30429583 | None:intergenic | 35.0% | |
| TTTCAAAGTGTGCTTTCCAT+GGG | - | chr7.2:30430476-30430495 | MS.gene27569:intron | 35.0% | |
| ! | AGAATTTGCCAATTTGGTGA+AGG | - | chr7.2:30430925-30430944 | MS.gene27569:intron | 35.0% |
| !! | AAATCCCATTGGTTTGAACA+CGG | - | chr7.2:30430829-30430848 | MS.gene27569:intron | 35.0% |
| !! | AGGTAGGTATGGAGTTTTAA+TGG | + | chr7.2:30430147-30430166 | None:intergenic | 35.0% |
| !!! | AAGTTTTGAATCACATGTGG+AGG | + | chr7.2:30430548-30430567 | None:intergenic | 35.0% |
| !!! | CTGTTTTGGTGGGAATATTA+AGG | - | chr7.2:30430316-30430335 | MS.gene27569:intron | 35.0% |
| !!! | GCTAAGTTTTGAATCACATG+TGG | + | chr7.2:30430551-30430570 | None:intergenic | 35.0% |
| !!! | TTCATCGGTTTTGTGGTAAA+TGG | - | chr7.2:30428573-30428592 | MS.gene27569:CDS | 35.0% |
| !!! | TTTGTTGTTCATCGGTTTTG+TGG | - | chr7.2:30428566-30428585 | MS.gene27569:CDS | 35.0% |
| AAAACTCCATACCTACCTGA+CGG | - | chr7.2:30430149-30430168 | MS.gene27569:intron | 40.0% | |
| AAAGTGGTCTCATGTGTTTC+TGG | - | chr7.2:30429988-30430007 | MS.gene27569:intron | 40.0% | |
| AACTGTAGAATGCATGCTCT+GGG | - | chr7.2:30429746-30429765 | MS.gene27569:CDS | 40.0% | |
| AATAGAATTGCTGTGTGGAG+TGG | - | chr7.2:30430638-30430657 | MS.gene27569:intron | 40.0% | |
| AGGAATGTATGGGAAATGAC+AGG | - | chr7.2:30430597-30430616 | MS.gene27569:intron | 40.0% | |
| ATAGAATTGCTGTGTGGAGT+GGG | - | chr7.2:30430639-30430658 | MS.gene27569:intron | 40.0% | |
| ATGGTGATCTACTAGAGTGA+AGG | - | chr7.2:30428592-30428611 | MS.gene27569:CDS | 40.0% | |
| ATTCCCACCAAAACAGTTGA+CGG | + | chr7.2:30430312-30430331 | None:intergenic | 40.0% | |
| CAAAACATATTGGGGCTCTT+CGG | + | chr7.2:30429314-30429333 | None:intergenic | 40.0% | |
| CAGATTGAGAATGGAGTTGA+AGG | - | chr7.2:30430212-30430231 | MS.gene27569:intron | 40.0% | |
| CATTATTCAGGAACTCTTCC+TGG | - | chr7.2:30429499-30429518 | MS.gene27569:intron | 40.0% | |
| CTCAATCTGCATATTCACCA+AGG | + | chr7.2:30430201-30430220 | None:intergenic | 40.0% | |
| CTTTCAAAGTGTGCTTTCCA+TGG | - | chr7.2:30430475-30430494 | MS.gene27569:intron | 40.0% | |
| GATCTGTGATGAAACCATAG+AGG | - | chr7.2:30429810-30429829 | MS.gene27569:intron | 40.0% | |
| GCTACATTCAAGACCTATAC+TGG | - | chr7.2:30428260-30428279 | MS.gene27569:CDS | 40.0% | |
| GGAATGTATGGGAAATGACA+GGG | - | chr7.2:30430598-30430617 | MS.gene27569:intron | 40.0% | |
| GTAACATTGGAAGGATGAAG+CGG | + | chr7.2:30428311-30428330 | None:intergenic | 40.0% | |
| GTGTTCAAACCAATGGGATT+TGG | + | chr7.2:30430830-30430849 | None:intergenic | 40.0% | |
| GTTGCAAGCAATTTGATTCC+GGG | - | chr7.2:30430719-30430738 | MS.gene27569:intron | 40.0% | |
| TAATGCGAGAGCTCATGTTT+GGG | - | chr7.2:30430744-30430763 | MS.gene27569:intron | 40.0% | |
| TATTTACAGGACTTGTACCG+AGG | - | chr7.2:30430094-30430113 | MS.gene27569:intron | 40.0% | |
| TCGTACATGAAGACAGATAC+AGG | + | chr7.2:30429392-30429411 | None:intergenic | 40.0% | |
| TCTCAGACACTTTATGTCCT+CGG | + | chr7.2:30430114-30430133 | None:intergenic | 40.0% | |
| TGAAGGCCAACTAATGAACT+GGG | - | chr7.2:30430259-30430278 | MS.gene27569:intron | 40.0% | |
| TGGAAAAGCCAGTCAATCAA+AGG | + | chr7.2:30430803-30430822 | None:intergenic | 40.0% | |
| TGTATCTGTCTTCATGTACG+AGG | - | chr7.2:30429391-30429410 | MS.gene27569:intron | 40.0% | |
| TTAATGCGAGAGCTCATGTT+TGG | - | chr7.2:30430743-30430762 | MS.gene27569:intron | 40.0% | |
| TTACCACTGACAAAACCACT+AGG | - | chr7.2:30428327-30428346 | MS.gene27569:CDS | 40.0% | |
| TTACTATGGCAAAACCTCCT+TGG | - | chr7.2:30430436-30430455 | MS.gene27569:intron | 40.0% | |
| TTCAAAGTGTGCTTTCCATG+GGG | - | chr7.2:30430477-30430496 | MS.gene27569:intron | 40.0% | |
| TTGTCAGTGGTAACATTGGA+AGG | + | chr7.2:30428320-30428339 | None:intergenic | 40.0% | |
| ! | AAGGAGGTTTTGCCATAGTA+AGG | + | chr7.2:30430437-30430456 | None:intergenic | 40.0% |
| ! | AGGAGGTTTTGCCATAGTAA+GGG | + | chr7.2:30430436-30430455 | None:intergenic | 40.0% |
| ! | ATTGGTCGACAGCATTTTGT+TGG | - | chr7.2:30430950-30430969 | MS.gene27569:CDS | 40.0% |
| ! | CTGTACCACTGCATGTTTTA+TGG | - | chr7.2:30429954-30429973 | MS.gene27569:intron | 40.0% |
| ! | CTTAGCTCAAAGTACTTGCT+TGG | - | chr7.2:30430565-30430584 | MS.gene27569:intron | 40.0% |
| ! | GCCAATTTGGTGAAGGAAAT+TGG | - | chr7.2:30430932-30430951 | MS.gene27569:intron | 40.0% |
| !! | GGAGTTGAAGGTGTTATTGT+TGG | - | chr7.2:30430224-30430243 | MS.gene27569:intron | 40.0% |
| !! | GGTTTTGTCAGTGGTAACAT+TGG | + | chr7.2:30428324-30428343 | None:intergenic | 40.0% |
| !! | GTTGAAGGTGTTATTGTTGG+TGG | - | chr7.2:30430227-30430246 | MS.gene27569:intron | 40.0% |
| !! | TGATGACGACGACTTTTTCT+TGG | - | chr7.2:30430994-30431013 | MS.gene27569:CDS | 40.0% |
| AACCAATGGGATTTGGCATG+TGG | + | chr7.2:30430823-30430842 | None:intergenic | 45.0% | |
| AAGAGCCGTGTTCAAACCAA+TGG | + | chr7.2:30430837-30430856 | None:intergenic | 45.0% | |
| AATGCGAGAGCTCATGTTTG+GGG | - | chr7.2:30430745-30430764 | MS.gene27569:intron | 45.0% | |
| ACAAATGGCAGCCTGAAAAC+TGG | + | chr7.2:30430881-30430900 | None:intergenic | 45.0% | |
| ACGATGCTAGATGGGGTTAT+GGG | - | chr7.2:30430678-30430697 | MS.gene27569:intron | 45.0% | |
| AGAGCCGTGTTCAAACCAAT+GGG | + | chr7.2:30430836-30430855 | None:intergenic | 45.0% | |
| AGCAATTCATGCAACTGAGC+AGG | - | chr7.2:30430373-30430392 | MS.gene27569:intron | 45.0% | |
| AGCTCTTGCCTTTGATTGAC+TGG | - | chr7.2:30430792-30430811 | MS.gene27569:intron | 45.0% | |
| AGTTGCATGAATTGCTTCCC+TGG | + | chr7.2:30430369-30430388 | None:intergenic | 45.0% | |
| ATACTGGAAGCAACTCAACC+AGG | - | chr7.2:30430348-30430367 | MS.gene27569:intron | 45.0% | |
| ATATATGATTGTGGGCCCCA+TGG | + | chr7.2:30430495-30430514 | None:intergenic | 45.0% | |
| ATGAATGCCACGATGCTAGA+TGG | - | chr7.2:30430669-30430688 | MS.gene27569:intron | 45.0% | |
| ATGAGCTCTCGCATTAAACC+CGG | + | chr7.2:30430740-30430759 | None:intergenic | 45.0% | |
| CAAAACCTCCTTGGAAGGTA+TGG | - | chr7.2:30430445-30430464 | MS.gene27569:intron | 45.0% | |
| GAACTGTAGAATGCATGCTC+TGG | - | chr7.2:30429745-30429764 | MS.gene27569:CDS | 45.0% | |
| GATTTCACAGCTGCTTGTGT+AGG | + | chr7.2:30429528-30429547 | None:intergenic | 45.0% | |
| GCAATTCATGCAACTGAGCA+GGG | - | chr7.2:30430374-30430393 | MS.gene27569:intron | 45.0% | |
| GCTCTTCCCAGTTCATTAGT+TGG | + | chr7.2:30430268-30430287 | None:intergenic | 45.0% | |
| GTGAAGGCCAACTAATGAAC+TGG | - | chr7.2:30430258-30430277 | MS.gene27569:intron | 45.0% | |
| TACTGGAAGCAACTCAACCA+GGG | - | chr7.2:30430349-30430368 | MS.gene27569:intron | 45.0% | |
| TATAATGTGCCTTCACGGAC+TGG | - | chr7.2:30430512-30430531 | MS.gene27569:intron | 45.0% | |
| TATACTGGCGTATGCTTCAC+AGG | - | chr7.2:30428275-30428294 | MS.gene27569:CDS | 45.0% | |
| TATGGCAAAACCTCCTTGGA+AGG | - | chr7.2:30430440-30430459 | MS.gene27569:intron | 45.0% | |
| TCAAGATCAAATCGACCGTC+AGG | + | chr7.2:30430167-30430186 | None:intergenic | 45.0% | |
| TCTACTAGAGTGAAGGACTC+TGG | - | chr7.2:30428599-30428618 | MS.gene27569:CDS | 45.0% | |
| TCTCATAACTACGCATTGGG+AGG | + | chr7.2:30429560-30429579 | None:intergenic | 45.0% | |
| TGAATGCCACGATGCTAGAT+GGG | - | chr7.2:30430670-30430689 | MS.gene27569:intron | 45.0% | |
| TGTGAAGCATACGCCAGTAT+AGG | + | chr7.2:30428276-30428295 | None:intergenic | 45.0% | |
| TTCCACATGCCAAATCCCAT+TGG | - | chr7.2:30430818-30430837 | MS.gene27569:intron | 45.0% | |
| TTGCTCAACTTGGAGTTGTC+AGG | - | chr7.2:30430855-30430874 | MS.gene27569:intron | 45.0% | |
| ! | ATCCTTTTCTCCAAAGGGAG+AGG | + | chr7.2:30430905-30430924 | None:intergenic | 45.0% |
| ! | GCTGGTGTCAAGGAATGTAT+GGG | - | chr7.2:30430587-30430606 | MS.gene27569:intron | 45.0% |
| ! | TACCTCTCCCTTTGGAGAAA+AGG | - | chr7.2:30430900-30430919 | MS.gene27569:intron | 45.0% |
| ! | TCCAAAGGGAGAGGTACAAA+TGG | + | chr7.2:30430896-30430915 | None:intergenic | 45.0% |
| !! | CTCATGTGTTTCTGGCATCA+TGG | - | chr7.2:30429996-30430015 | MS.gene27569:intron | 45.0% |
| !! | GTTATTGTTGGTGGCACAAC+TGG | - | chr7.2:30430236-30430255 | MS.gene27569:intron | 45.0% |
| !!! | ACACCGTCAACTGTTTTGGT+GGG | - | chr7.2:30430306-30430325 | MS.gene27569:intron | 45.0% |
| !!! | GAACCTAGTGGTTTTGTCAG+TGG | + | chr7.2:30428333-30428352 | None:intergenic | 45.0% |
| AACACGGCTCTTGCTCAACT+TGG | - | chr7.2:30430845-30430864 | MS.gene27569:intron | 50.0% | |
| AATCGACCGTCAGGTAGGTA+TGG | + | chr7.2:30430158-30430177 | None:intergenic | 50.0% | |
| ACGCATTGGGAGGTGAAAAG+TGG | + | chr7.2:30429550-30429569 | None:intergenic | 50.0% | |
| AGCAACCATACCTTCCAAGG+AGG | + | chr7.2:30430453-30430472 | None:intergenic | 50.0% | |
| AGTCGTCGTCATCAAGAACC+TGG | + | chr7.2:30430988-30431007 | None:intergenic | 50.0% | |
| ATGCGAGAGCTCATGTTTGG+GGG | - | chr7.2:30430746-30430765 | MS.gene27569:intron | 50.0% | |
| ATGTCTTGACCAGTCCGTGA+AGG | + | chr7.2:30430524-30430543 | None:intergenic | 50.0% | |
| CACGATGCTAGATGGGGTTA+TGG | - | chr7.2:30430677-30430696 | MS.gene27569:intron | 50.0% | |
| CATAACCCCATCTAGCATCG+TGG | + | chr7.2:30430679-30430698 | None:intergenic | 50.0% | |
| CGATGCTAGATGGGGTTATG+GGG | - | chr7.2:30430679-30430698 | MS.gene27569:intron | 50.0% | |
| GAATGCCACGATGCTAGATG+GGG | - | chr7.2:30430671-30430690 | MS.gene27569:intron | 50.0% | |
| GATCAAATCGACCGTCAGGT+AGG | + | chr7.2:30430163-30430182 | None:intergenic | 50.0% | |
| GCCATTTGTACCTCTCCCTT+TGG | - | chr7.2:30430892-30430911 | MS.gene27569:intron | 50.0% | |
| GGAAGGATGAAGCGGAAAAG+CGG | + | chr7.2:30428303-30428322 | None:intergenic | 50.0% | |
| GTGAGCAACCATACCTTCCA+AGG | + | chr7.2:30430456-30430475 | None:intergenic | 50.0% | |
| TGTTGGAACTGAAGACGTCC+AGG | - | chr7.2:30430967-30430986 | MS.gene27569:CDS | 50.0% | |
| ! | CATGCTCTGGGTAGGATTTC+TGG | - | chr7.2:30429758-30429777 | MS.gene27569:CDS | 50.0% |
| ! | GAGTTGTCAGGCCAGTTTTC+AGG | - | chr7.2:30430867-30430886 | MS.gene27569:intron | 50.0% |
| ! | GCTCAAAGTACTTGCTTGGC+TGG | - | chr7.2:30430569-30430588 | MS.gene27569:intron | 50.0% |
| ! | GGCTGGTGTCAAGGAATGTA+TGG | - | chr7.2:30430586-30430605 | MS.gene27569:intron | 50.0% |
| ! | GGTTTTGCGGTTGGAATGCA+TGG | - | chr7.2:30430395-30430414 | MS.gene27569:intron | 50.0% |
| ! | GTAGAATGCATGCTCTGGGT+AGG | - | chr7.2:30429750-30429769 | MS.gene27569:CDS | 50.0% |
| ! | TACTTGCTTGGCTGGTGTCA+AGG | - | chr7.2:30430577-30430596 | MS.gene27569:intron | 50.0% |
| ! | TGCAACTGAGCAGGGTTTTG+CGG | - | chr7.2:30430382-30430401 | MS.gene27569:intron | 50.0% |
| !! | CACACCGTCAACTGTTTTGG+TGG | - | chr7.2:30430305-30430324 | MS.gene27569:intron | 50.0% |
| AGATGGGGTTATGGGGCTAC+TGG | - | chr7.2:30430686-30430705 | MS.gene27569:intron | 55.0% | |
| AGCTGCTTGTGTAGGCTTCC+AGG | + | chr7.2:30429520-30429539 | None:intergenic | 55.0% | |
| ! | ACTGAGCAGGGTTTTGCGGT+TGG | - | chr7.2:30430386-30430405 | MS.gene27569:intron | 55.0% |
| ! | GCGCACACCGTCAACTGTTT+TGG | - | chr7.2:30430302-30430321 | MS.gene27569:intron | 55.0% |
| !! | GTTGGTGGCACAACTGGTGA+AGG | - | chr7.2:30430242-30430261 | MS.gene27569:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 30428257 | 30431030 | 30428257 | ID=MS.gene27569 |
| chr7.2 | mRNA | 30428257 | 30431030 | 30428257 | ID=MS.gene27569.t1;Parent=MS.gene27569 |
| chr7.2 | exon | 30430939 | 30431030 | 30430939 | ID=MS.gene27569.t1.exon1;Parent=MS.gene27569.t1 |
| chr7.2 | CDS | 30430939 | 30431030 | 30430939 | ID=cds.MS.gene27569.t1;Parent=MS.gene27569.t1 |
| chr7.2 | exon | 30429698 | 30429778 | 30429698 | ID=MS.gene27569.t1.exon2;Parent=MS.gene27569.t1 |
| chr7.2 | CDS | 30429698 | 30429778 | 30429698 | ID=cds.MS.gene27569.t1;Parent=MS.gene27569.t1 |
| chr7.2 | exon | 30428257 | 30429184 | 30428257 | ID=MS.gene27569.t1.exon3;Parent=MS.gene27569.t1 |
| chr7.2 | CDS | 30428257 | 30429184 | 30428257 | ID=cds.MS.gene27569.t1;Parent=MS.gene27569.t1 |
| Gene Sequence |
| Protein sequence |
