AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32587


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32587.t1 MTR_3g108560 91.250 240 17 1 14 253 14 249 2.83e-160 447
MS.gene32587.t1 MTR_3g108560 91.250 240 17 1 14 253 14 249 1.53e-159 448
MS.gene32587.t1 MTR_3g108150 52.800 250 105 5 12 257 6 246 1.82e-75 234
MS.gene32587.t1 MTR_0492s0020 53.878 245 97 7 7 248 74 305 3.89e-70 222
MS.gene32587.t1 MTR_0492s0020 65.079 63 16 1 9 71 3 59 3.88e-18 83.6
MS.gene32587.t1 MTR_0543s0010 53.878 245 97 7 7 248 74 305 8.22e-70 222
MS.gene32587.t1 MTR_0543s0010 65.079 63 16 1 9 71 3 59 3.98e-18 83.6
MS.gene32587.t1 MTR_7g088260 53.879 232 91 7 23 247 90 312 2.58e-69 221
MS.gene32587.t1 MTR_3g109982 50.725 207 81 5 1 200 1 193 4.26e-50 176
MS.gene32587.t1 MTR_3g109982 61.290 93 35 1 137 229 222 313 2.85e-26 107
MS.gene32587.t1 MTR_3g087260 53.261 184 70 4 23 203 11 181 6.01e-50 170
MS.gene32587.t1 MTR_3g087260 51.515 132 57 3 120 248 184 311 3.49e-30 117
MS.gene32587.t1 MTR_3g110010 50.244 205 85 4 1 200 1 193 6.47e-50 175
MS.gene32587.t1 MTR_3g110010 61.290 93 35 1 137 229 222 313 3.66e-26 107
MS.gene32587.t1 MTR_7g056020 45.267 243 109 7 10 248 4 226 2.44e-45 161
MS.gene32587.t1 MTR_7g115270 38.075 239 122 5 12 229 5 238 3.68e-40 143
MS.gene32587.t1 MTR_1g041245 39.914 233 126 6 24 247 11 238 1.03e-39 142
MS.gene32587.t1 MTR_7g056447 37.946 224 123 7 23 234 8 227 5.18e-38 135
MS.gene32587.t1 MTR_7g056433 41.048 229 119 7 14 230 4 228 5.43e-38 137
MS.gene32587.t1 MTR_8g085430 41.709 199 93 7 24 203 11 205 6.51e-37 133
MS.gene32587.t1 MTR_7g032380 37.549 253 124 11 24 261 11 244 8.13e-37 134
MS.gene32587.t1 MTR_4g134150 42.222 180 96 4 23 198 13 188 1.22e-36 130
MS.gene32587.t1 MTR_3g036250 38.009 221 127 4 21 231 2 222 2.29e-34 127
MS.gene32587.t1 MTR_3g040700 40.957 188 101 5 24 201 43 230 3.06e-34 128
MS.gene32587.t1 MTR_7g034110 37.788 217 119 5 24 227 11 224 5.34e-34 126
MS.gene32587.t1 MTR_5g073420 37.838 222 111 6 24 229 11 221 6.40e-34 126
MS.gene32587.t1 MTR_7g033990 38.235 238 129 7 24 248 11 243 1.25e-33 126
MS.gene32587.t1 MTR_7g098480 37.238 239 127 7 1 228 1 227 5.87e-33 125
MS.gene32587.t1 MTR_7g098570 40.777 206 107 5 2 199 4 202 1.14e-32 125
MS.gene32587.t1 MTR_7g033915 36.555 238 127 6 24 254 11 231 4.45e-32 121
MS.gene32587.t1 MTR_7g098510 37.603 242 123 8 1 228 1 228 6.33e-32 121
MS.gene32587.t1 MTR_7g056277 35.685 241 141 5 19 248 254 491 1.03e-31 123
MS.gene32587.t1 MTR_7g056287 35.169 236 139 5 23 247 2 234 1.05e-31 120
MS.gene32587.t1 MTR_7g032370 38.164 207 106 6 36 231 2 197 5.92e-31 118
MS.gene32587.t1 MTR_7g034115 42.857 182 94 4 24 196 11 191 1.41e-30 117
MS.gene32587.t1 MTR_7g056420 40.092 217 97 6 23 231 8 199 1.97e-30 120
MS.gene32587.t1 MTR_7g056430 40.092 217 97 6 23 231 8 199 2.34e-30 120
MS.gene32587.t1 MTR_7g033945 42.262 168 79 6 24 176 11 175 1.87e-29 110
MS.gene32587.t1 MTR_1g066830 33.898 236 142 7 24 249 8 239 3.39e-28 111
MS.gene32587.t1 MTR_5g058100 40.415 193 107 5 17 201 2 194 4.79e-28 110
MS.gene32587.t1 MTR_4g080610 33.735 249 123 6 1 248 1 208 8.53e-28 109
MS.gene32587.t1 MTR_7g007080 35.371 229 124 7 22 231 2 225 1.44e-27 109
MS.gene32587.t1 MTR_3g023630 38.298 188 104 6 24 201 8 193 2.47e-27 108
MS.gene32587.t1 MTR_7g114710 35.326 184 109 4 24 198 13 195 2.59e-27 108
MS.gene32587.t1 MTR_5g061680 37.173 191 94 4 24 196 11 193 3.40e-27 107
MS.gene32587.t1 MTR_1g085120 34.553 246 131 8 23 248 91 326 3.51e-27 109
MS.gene32587.t1 MTR_1g085120 34.553 246 131 8 23 248 178 413 3.54e-27 109
MS.gene32587.t1 MTR_5g008920 36.818 220 121 8 26 233 14 227 4.05e-27 108
MS.gene32587.t1 MTR_3g114200 41.104 163 84 5 1 156 1 158 4.11e-27 103
MS.gene32587.t1 MTR_1g085120 34.553 246 131 8 23 248 166 401 6.26e-27 109
MS.gene32587.t1 MTR_6g011460 32.636 239 138 8 24 248 46 275 8.69e-27 108
MS.gene32587.t1 MTR_3g082890 37.264 212 109 8 1 200 81 280 1.42e-26 108
MS.gene32587.t1 MTR_3g082890 37.264 212 109 8 1 200 1 200 1.52e-26 107
MS.gene32587.t1 MTR_5g012840 36.923 195 106 5 48 230 13 202 3.00e-26 104
MS.gene32587.t1 MTR_3g467400 37.129 202 96 7 24 198 3 200 5.81e-26 105
MS.gene32587.t1 MTR_7g007340 33.858 254 127 10 16 258 5 228 1.25e-25 103
MS.gene32587.t1 MTR_3g095600 36.036 222 101 8 24 230 4 199 4.22e-25 101
MS.gene32587.t1 MTR_4g039440 29.114 237 152 4 24 249 34 265 4.44e-25 103
MS.gene32587.t1 MTR_6g022500 35.683 227 133 6 14 229 91 315 4.53e-25 103
MS.gene32587.t1 MTR_5g058000 40.884 181 98 5 24 196 8 187 1.37e-24 101
MS.gene32587.t1 MTR_3g105060 36.649 191 112 5 24 206 14 203 1.74e-24 100
MS.gene32587.t1 MTR_7g033940 40.152 132 75 1 5 132 75 206 4.68e-24 97.1
MS.gene32587.t1 MTR_7g060470 32.031 256 142 8 23 248 2 255 6.64e-24 99.8
MS.gene32587.t1 MTR_7g007370 35.455 220 103 8 10 227 3 185 1.50e-23 98.2
MS.gene32587.t1 MTR_1g108800 37.850 214 93 6 24 228 8 190 1.83e-23 97.8
MS.gene32587.t1 MTR_1g108820 35.106 188 114 3 18 199 2 187 2.03e-23 98.2
MS.gene32587.t1 MTR_1g108820 35.106 188 114 3 18 199 2 187 2.28e-23 97.8
MS.gene32587.t1 MTR_1089s0010 33.906 233 141 7 18 240 2 231 3.35e-23 97.4
MS.gene32587.t1 MTR_6g044560 30.662 287 147 9 8 248 161 441 3.37e-23 99.0
MS.gene32587.t1 MTR_6g044572 31.111 270 135 8 24 248 2 265 6.25e-23 97.1
MS.gene32587.t1 MTR_3g071850 34.247 219 125 7 24 227 24 238 1.27e-22 97.4
MS.gene32587.t1 MTR_6g045333 35.648 216 126 6 24 227 61 275 1.59e-22 96.3
MS.gene32587.t1 MTR_7g026500 33.333 228 127 7 18 227 8 228 5.72e-22 94.4
MS.gene32587.t1 MTR_6g040270 32.883 222 138 6 26 237 10 230 1.06e-21 93.6
MS.gene32587.t1 MTR_3g107100 34.673 199 113 6 19 204 6 200 1.63e-21 93.2
MS.gene32587.t1 MTR_7g055943 37.097 186 104 6 24 198 40 223 1.69e-21 93.2
MS.gene32587.t1 MTR_2g007500 35.533 197 88 8 24 201 14 190 4.78e-21 90.9
MS.gene32587.t1 MTR_5g008950 30.962 239 129 9 26 246 1 221 1.02e-20 90.5
MS.gene32587.t1 MTR_2g005990 34.328 201 108 8 24 201 6 205 2.68e-20 89.7
MS.gene32587.t1 MTR_3g107160 31.556 225 132 7 20 227 6 225 5.46e-20 88.6
MS.gene32587.t1 MTR_5g045510 34.579 214 126 9 24 228 12 220 8.66e-20 88.2
MS.gene32587.t1 MTR_5g083890 31.939 263 134 10 23 248 5 259 1.02e-19 88.6
MS.gene32587.t1 MTR_7g081290 50.476 105 43 4 1 102 1 99 1.17e-19 85.9
MS.gene32587.t1 MTR_5g084070 35.945 217 119 9 8 217 3 206 1.78e-19 87.4
MS.gene32587.t1 MTR_1g107385 32.540 252 108 10 23 229 31 265 3.70e-19 86.7
MS.gene32587.t1 MTR_3g099830 31.579 247 140 9 13 248 1 229 4.98e-19 85.9
MS.gene32587.t1 MTR_0009s0080 36.916 214 118 9 26 226 20 229 5.49e-19 86.3
MS.gene32587.t1 MTR_2g007400 31.472 197 112 4 24 197 12 208 2.23e-18 84.3
MS.gene32587.t1 MTR_7g075820 28.114 281 144 11 22 258 4 270 7.20e-18 82.8
MS.gene32587.t1 MTR_5g073340 34.831 178 94 4 24 199 8 165 8.27e-18 81.6
MS.gene32587.t1 MTR_1g095750 48.148 81 40 1 24 102 46 126 2.03e-17 77.0
MS.gene32587.t1 MTR_2g020170 38.655 119 59 4 22 130 20 134 2.92e-17 76.6
MS.gene32587.t1 MTR_4g093690 35.204 196 100 9 20 196 14 201 4.39e-17 79.3
MS.gene32587.t1 MTR_3g113782 45.570 79 35 2 1 78 1 72 4.67e-17 74.7
MS.gene32587.t1 MTR_2g007360 29.464 224 111 8 24 229 12 206 5.08e-17 80.1
MS.gene32587.t1 MTR_3g107120 31.304 230 127 7 24 227 9 233 5.43e-17 80.1
MS.gene32587.t1 MTR_8g467800 26.609 233 150 6 5 222 1 227 5.44e-17 79.7
MS.gene32587.t1 MTR_4g098590 32.367 207 98 9 26 201 1 196 6.30e-17 79.7
MS.gene32587.t1 MTR_7g098590 43.269 104 53 1 1 104 1 98 7.17e-17 75.5
MS.gene32587.t1 MTR_1g053025 34.359 195 111 6 24 201 2 196 9.84e-17 79.3
MS.gene32587.t1 MTR_8g467800 26.609 233 150 6 5 222 1 227 1.27e-16 79.3
MS.gene32587.t1 MTR_7g021630 32.836 201 103 9 17 195 10 200 1.92e-16 78.2
MS.gene32587.t1 MTR_7g021630 32.836 201 103 9 17 195 10 200 1.94e-16 78.2
MS.gene32587.t1 MTR_5g058350 34.254 181 85 5 24 196 8 162 6.56e-16 73.9
MS.gene32587.t1 MTR_5g007410 35.326 184 106 6 26 198 28 209 1.13e-15 76.6
MS.gene32587.t1 MTR_2g007450 31.050 219 118 8 7 196 2 216 1.63e-15 75.9
MS.gene32587.t1 MTR_2g082800 33.520 179 103 6 8 175 11 184 2.54e-15 75.5
MS.gene32587.t1 MTR_7g083740 30.556 180 107 4 24 201 17 180 2.92e-15 75.1
MS.gene32587.t1 MTR_5g065100 31.308 214 132 7 22 226 6 213 3.06e-15 75.1
MS.gene32587.t1 MTR_3g095640 33.537 164 93 5 18 165 12 175 3.42e-15 72.0
MS.gene32587.t1 MTR_8g062310 30.939 181 114 6 24 197 25 201 3.95e-15 75.1
MS.gene32587.t1 MTR_7g056280 36.145 166 89 5 20 169 2 166 6.50e-15 74.7
MS.gene32587.t1 MTR_6g022360 29.508 244 149 8 19 253 38 267 6.74e-15 74.3
MS.gene32587.t1 MTR_5g013500 28.696 230 110 8 23 234 8 201 6.83e-15 73.9
MS.gene32587.t1 MTR_1g090900 34.118 170 99 5 18 177 5 171 7.21e-15 71.6
MS.gene32587.t1 MTR_3g023270 34.146 164 101 5 19 177 7 168 7.50e-15 73.6
MS.gene32587.t1 MTR_2g008310 28.226 248 167 7 24 261 2 248 7.57e-15 73.9
MS.gene32587.t1 MTR_8g014290 30.822 146 81 2 15 140 1 146 9.99e-15 70.5
MS.gene32587.t1 MTR_4g056040 32.443 262 124 13 20 234 5 260 1.05e-14 73.9
MS.gene32587.t1 MTR_5g073370 30.453 243 147 9 21 248 2 237 1.22e-14 73.2
MS.gene32587.t1 MTR_2g099980 30.052 193 111 7 2 173 9 198 1.28e-14 73.6
MS.gene32587.t1 MTR_5g045170 36.170 188 99 9 26 198 16 197 1.29e-14 73.2
MS.gene32587.t1 MTR_5g063950 30.556 216 113 8 24 228 8 197 1.43e-14 73.2
MS.gene32587.t1 MTR_3g023330 35.088 171 94 8 19 177 10 175 1.49e-14 72.8
MS.gene32587.t1 MTR_8g468910 27.895 190 120 6 4 178 28 215 1.56e-14 73.2
MS.gene32587.t1 MTR_2g072720 32.692 208 112 8 17 202 32 233 2.02e-14 72.8
MS.gene32587.t1 MTR_2g008320 28.906 256 159 10 24 261 52 302 2.96e-14 72.4
MS.gene32587.t1 MTR_1g038710 33.505 194 107 8 22 196 17 207 3.07e-14 72.4
MS.gene32587.t1 MTR_3g048290 31.343 201 103 7 24 200 23 212 4.12e-14 72.0
MS.gene32587.t1 MTR_5g021550 36.111 108 56 2 19 119 14 115 8.03e-14 67.8
MS.gene32587.t1 MTR_8g445780 31.795 195 115 7 17 196 6 197 9.13e-14 70.9
MS.gene32587.t1 MTR_5g080710 36.683 199 106 10 20 204 29 221 1.09e-13 70.9
MS.gene32587.t1 MTR_7g017280 29.508 183 113 5 9 177 133 313 1.15e-13 70.9
MS.gene32587.t1 MTR_8g014160 30.693 202 114 7 20 197 37 236 2.01e-13 69.7
MS.gene32587.t1 MTR_7g023310 28.191 188 126 3 21 200 23 209 2.67e-13 69.7
MS.gene32587.t1 MTR_5g039970 29.787 188 119 3 21 196 16 202 4.10e-13 68.6
MS.gene32587.t1 MTR_6g022390 37.209 129 62 5 24 136 5 130 4.12e-13 65.9
MS.gene32587.t1 MTR_6g018600 32.353 136 85 4 20 150 48 181 4.18e-13 68.9
MS.gene32587.t1 MTR_4g056030 33.480 227 116 12 20 219 5 223 4.34e-13 68.9
MS.gene32587.t1 MTR_8g017280 38.889 72 44 0 23 94 35 106 4.38e-13 68.2
MS.gene32587.t1 MTR_4g056020 34.821 224 117 13 20 219 5 223 4.43e-13 68.9
MS.gene32587.t1 MTR_4g056070 32.342 269 103 16 20 219 5 263 5.50e-13 68.6
MS.gene32587.t1 MTR_2g082880 31.771 192 118 7 21 202 7 195 5.86e-13 68.6
MS.gene32587.t1 MTR_8g058965 29.224 219 117 10 15 198 1 216 6.64e-13 68.6
MS.gene32587.t1 MTR_8g468810 28.782 271 140 10 16 236 10 277 8.26e-13 67.8
MS.gene32587.t1 MTR_8g468810 28.417 278 146 10 16 243 10 284 8.41e-13 67.8
MS.gene32587.t1 MTR_8g017280 38.889 72 44 0 23 94 35 106 8.65e-13 68.2
MS.gene32587.t1 MTR_8g468810 28.417 278 146 10 16 243 10 284 8.73e-13 67.8
MS.gene32587.t1 MTR_1g090883 31.980 197 111 7 21 200 16 206 8.92e-13 67.8
MS.gene32587.t1 MTR_2g100590 29.902 204 105 10 21 196 39 232 9.04e-13 68.2
MS.gene32587.t1 MTR_2g100590 29.902 204 105 10 21 196 39 232 1.06e-12 67.8
MS.gene32587.t1 MTR_8g468810 28.782 271 140 10 16 236 10 277 1.10e-12 67.4
MS.gene32587.t1 MTR_7g034090 33.793 145 78 4 23 153 3 143 1.43e-12 67.4
MS.gene32587.t1 MTR_7g034120 35.443 158 84 8 87 229 1 155 1.52e-12 66.6
MS.gene32587.t1 MTR_8g468810 28.417 278 146 10 16 243 10 284 1.61e-12 67.4
MS.gene32587.t1 MTR_2g100590 29.902 204 105 10 21 196 39 232 1.63e-12 67.4
MS.gene32587.t1 MTR_8g070950 28.293 205 119 8 14 199 5 200 1.65e-12 67.4
MS.gene32587.t1 MTR_4g024780 29.480 173 109 4 17 178 139 309 2.26e-12 67.0
MS.gene32587.t1 MTR_5g061410 32.195 205 114 9 26 226 7 190 2.48e-12 65.9
MS.gene32587.t1 MTR_4g024680 28.095 210 137 7 22 222 152 356 3.59e-12 66.6
MS.gene32587.t1 MTR_3g007790 32.203 177 103 6 17 178 18 192 3.80e-12 65.9
MS.gene32587.t1 MTR_5g063450 36.697 109 55 4 23 128 26 123 3.97e-12 65.9
MS.gene32587.t1 MTR_8g015830 27.928 222 126 6 18 206 2 222 5.11e-12 65.9
MS.gene32587.t1 MTR_4g032730 32.178 202 112 8 19 197 10 209 5.63e-12 65.9
MS.gene32587.t1 MTR_8g015830 27.928 222 126 6 18 206 2 222 5.73e-12 65.9
MS.gene32587.t1 MTR_4g050930 29.493 217 126 9 4 204 15 220 7.42e-12 65.1
MS.gene32587.t1 MTR_4g081030 30.939 181 115 5 21 196 14 189 8.21e-12 65.1
MS.gene32587.t1 MTR_4g080590 29.167 192 111 8 21 196 20 202 9.02e-12 64.7
MS.gene32587.t1 MTR_5g087940 30.864 162 108 3 18 177 20 179 1.04e-11 64.7
MS.gene32587.t1 MTR_2g101950 30.256 195 121 8 3 192 24 208 1.06e-11 64.7
MS.gene32587.t1 MTR_2g101950 30.256 195 121 8 3 192 66 250 1.07e-11 64.7
MS.gene32587.t1 MTR_4g055990 29.412 238 114 10 20 206 5 239 1.11e-11 64.7
MS.gene32587.t1 MTR_4g055990 29.412 238 114 10 20 206 5 239 1.15e-11 64.7
MS.gene32587.t1 MTR_5g039950 29.834 181 110 4 23 196 22 192 1.15e-11 64.7
MS.gene32587.t1 MTR_4g050930 30.137 219 122 10 4 204 15 220 1.21e-11 64.7
MS.gene32587.t1 MTR_4g080590 29.167 192 111 8 21 196 20 202 1.26e-11 64.7
MS.gene32587.t1 MTR_6g092430 30.601 183 103 8 15 178 1 178 1.26e-11 64.3
MS.gene32587.t1 MTR_2g101950 30.256 195 121 8 3 192 66 250 1.43e-11 64.3
MS.gene32587.t1 MTR_2g101950 30.256 195 121 8 3 192 65 249 1.45e-11 64.3
MS.gene32587.t1 MTR_8g058970 29.032 217 115 10 18 197 13 227 1.77e-11 64.3
MS.gene32587.t1 MTR_6g025160 28.889 135 89 4 21 150 98 230 1.91e-11 63.9
MS.gene32587.t1 MTR_3g007830 32.203 177 101 8 18 178 5 178 2.08e-11 63.9
MS.gene32587.t1 MTR_5g031970 31.183 186 98 7 24 196 16 184 2.89e-11 63.2
MS.gene32587.t1 MTR_2g083840 30.198 202 118 8 17 197 14 213 3.24e-11 63.5
MS.gene32587.t1 MTR_3g463830 39.080 87 49 2 19 103 58 142 3.64e-11 62.8
MS.gene32587.t1 MTR_8g062010 28.426 197 117 9 20 198 5 195 3.74e-11 63.2
MS.gene32587.t1 MTR_2g072730 33.333 120 71 2 17 127 9 128 4.64e-11 62.8
MS.gene32587.t1 MTR_2g072530 30.093 216 122 11 17 218 6 206 4.96e-11 62.8
MS.gene32587.t1 MTR_4g051480 32.374 139 87 3 18 150 19 156 7.42e-11 62.8
MS.gene32587.t1 MTR_4g092300 32.374 139 87 3 18 150 19 156 7.95e-11 62.4
MS.gene32587.t1 MTR_4g092440 33.981 103 60 3 1 101 13 109 8.28e-11 62.0
MS.gene32587.t1 MTR_4g055580 29.344 259 121 11 20 219 96 351 9.24e-11 62.0
MS.gene32587.t1 MTR_1g492880 38.636 88 52 1 21 106 3 90 9.34e-11 58.2
MS.gene32587.t1 MTR_2g036470 31.081 222 128 9 24 225 14 230 9.49e-11 62.0
MS.gene32587.t1 MTR_1g492880 38.636 88 52 1 21 106 3 90 9.60e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32587.t1 AT3G59200 36.316 190 101 7 24 196 7 193 1.65e-23 98.2
MS.gene32587.t1 AT3G59200 36.316 190 101 7 24 196 7 193 7.38e-23 97.8
MS.gene32587.t1 AT5G44940 34.896 192 107 6 21 197 2 190 3.84e-22 94.7
MS.gene32587.t1 AT5G44980 35.106 188 108 7 22 197 2 187 5.05e-22 93.2
MS.gene32587.t1 AT5G44980 35.106 188 108 7 22 197 2 187 5.05e-22 93.2
MS.gene32587.t1 AT2G26030 33.333 186 105 8 24 196 4 183 1.82e-21 93.2
MS.gene32587.t1 AT2G26030 33.333 186 105 8 24 196 4 183 1.82e-21 93.2
MS.gene32587.t1 AT2G26030 33.333 186 105 8 24 196 4 183 1.96e-21 93.2
MS.gene32587.t1 AT5G41840 35.000 200 100 8 24 196 14 210 1.96e-21 93.6
MS.gene32587.t1 AT5G44980 35.106 188 108 7 22 197 2 187 2.29e-21 93.2
MS.gene32587.t1 AT5G44980 35.106 188 108 7 22 197 2 187 2.29e-21 93.2
MS.gene32587.t1 AT4G00160 36.898 187 101 8 23 196 15 197 3.72e-21 92.4
MS.gene32587.t1 AT5G53635 32.432 185 106 5 26 197 2 180 6.55e-21 91.7
MS.gene32587.t1 AT5G22660 34.615 182 107 6 23 196 12 189 1.33e-20 89.7
MS.gene32587.t1 AT4G14103 37.245 196 101 11 24 202 8 198 1.55e-20 90.9
MS.gene32587.t1 AT4G14103 36.923 195 103 10 24 202 8 198 1.75e-20 90.1
MS.gene32587.t1 AT4G14103 36.923 195 103 10 24 202 8 198 1.75e-20 90.1
MS.gene32587.t1 AT4G14096 37.696 191 103 9 24 201 8 195 1.79e-20 90.5
MS.gene32587.t1 AT4G14096 37.696 191 103 9 24 201 8 195 1.79e-20 90.5
MS.gene32587.t1 AT5G44960 33.862 189 111 6 21 197 2 188 1.91e-20 90.1
MS.gene32587.t1 AT1G16930 31.746 189 117 5 17 196 8 193 2.01e-20 90.5
MS.gene32587.t1 AT1G16930 31.746 189 117 5 17 196 8 193 2.01e-20 90.5
MS.gene32587.t1 AT1G16930 31.746 189 117 5 17 196 8 193 2.01e-20 90.5
MS.gene32587.t1 AT5G22660 34.615 182 107 6 23 196 12 189 3.43e-20 89.7
MS.gene32587.t1 AT5G44950 33.333 186 105 6 24 196 4 183 1.19e-19 88.2
MS.gene32587.t1 AT3G58880 33.624 229 127 10 24 234 3 224 1.19e-19 88.2
MS.gene32587.t1 AT4G26340 35.000 180 110 3 24 196 2 181 1.60e-19 87.8
MS.gene32587.t1 AT2G26860 37.634 186 102 6 24 196 2 186 1.85e-19 87.4
MS.gene32587.t1 AT2G26860 37.634 186 102 6 24 196 2 186 1.85e-19 87.4
MS.gene32587.t1 AT3G26922 33.333 207 106 9 23 206 13 210 2.16e-19 86.3
MS.gene32587.t1 AT3G26922 33.333 207 106 9 23 206 13 210 2.16e-19 86.3
MS.gene32587.t1 AT5G53640 28.729 181 119 4 22 196 20 196 2.84e-19 84.3
MS.gene32587.t1 AT5G22700 33.889 180 109 5 24 196 6 182 2.92e-19 87.0
MS.gene32587.t1 AT5G22700 33.889 180 109 5 24 196 6 182 2.92e-19 87.0
MS.gene32587.t1 AT5G22700 33.889 180 109 5 24 196 6 182 2.92e-19 87.0
MS.gene32587.t1 AT5G22700 33.889 180 109 5 24 196 6 182 2.92e-19 87.0
MS.gene32587.t1 AT5G22700 33.889 180 109 5 24 196 43 219 3.83e-19 86.7
MS.gene32587.t1 AT5G22700 33.889 180 109 5 24 196 43 219 4.81e-19 86.7
MS.gene32587.t1 AT3G52680 35.176 199 108 10 23 205 20 213 2.02e-18 84.7
MS.gene32587.t1 AT4G10400 32.075 212 126 5 24 218 2 212 2.40e-18 84.3
MS.gene32587.t1 AT4G10400 32.075 212 126 5 24 218 2 212 2.40e-18 84.3
MS.gene32587.t1 AT4G10400 32.075 212 126 5 24 218 2 212 2.40e-18 84.3
MS.gene32587.t1 AT3G52680 35.176 199 108 10 23 205 20 213 2.81e-18 83.6
MS.gene32587.t1 AT1G06630 31.980 197 110 7 24 199 12 205 3.24e-18 82.8
MS.gene32587.t1 AT1G58310 34.286 210 93 11 24 196 8 209 5.00e-18 83.6
MS.gene32587.t1 AT1G06630 31.980 197 110 7 24 199 12 205 5.40e-18 82.8
MS.gene32587.t1 AT1G06630 31.980 197 110 7 24 199 12 205 5.40e-18 82.8
MS.gene32587.t1 AT3G58940 32.323 198 107 7 24 196 2 197 5.66e-18 83.6
MS.gene32587.t1 AT3G58940 32.323 198 107 7 24 196 2 197 5.66e-18 83.6
MS.gene32587.t1 AT1G06630 31.980 197 110 7 24 199 12 205 5.98e-18 83.2
MS.gene32587.t1 AT1G06630 31.980 197 110 7 24 199 12 205 5.98e-18 83.2
MS.gene32587.t1 AT1G06630 31.980 197 110 7 24 199 12 205 5.98e-18 83.2
MS.gene32587.t1 AT1G06630 31.980 197 110 7 24 199 12 205 5.98e-18 83.2
MS.gene32587.t1 AT4G26350 36.413 184 102 7 24 196 2 181 6.29e-18 83.2
MS.gene32587.t1 AT1G06630 31.980 197 110 7 24 199 21 214 6.82e-18 82.8
MS.gene32587.t1 AT1G55660 34.409 186 108 6 24 196 53 237 1.03e-17 82.0
MS.gene32587.t1 AT3G58930 33.010 206 110 10 24 204 2 204 1.10e-17 82.8
MS.gene32587.t1 AT3G58930 33.010 206 110 10 24 204 2 204 1.10e-17 82.8
MS.gene32587.t1 AT3G58930 33.010 206 110 10 24 204 2 204 1.10e-17 82.8
MS.gene32587.t1 AT1G55660 34.409 186 108 6 24 196 53 237 1.12e-17 82.8
MS.gene32587.t1 AT1G06630 31.980 197 110 7 24 199 12 205 1.16e-17 82.4
MS.gene32587.t1 AT5G56420 34.054 185 105 5 24 196 6 185 1.44e-17 82.0
MS.gene32587.t1 AT5G56420 34.054 185 105 5 24 196 6 185 1.44e-17 82.0
MS.gene32587.t1 AT5G56420 34.054 185 105 5 24 196 6 185 1.44e-17 82.0
MS.gene32587.t1 AT5G41830 34.171 199 102 8 24 196 13 208 2.15e-17 82.0
MS.gene32587.t1 AT4G00320 36.816 201 94 11 24 196 13 208 2.34e-17 81.6
MS.gene32587.t1 AT1G66310 30.159 189 119 6 17 196 12 196 2.49e-17 81.6
MS.gene32587.t1 AT1G32375 33.514 185 109 5 24 196 2 184 2.68e-17 81.3
MS.gene32587.t1 AT1G32375 33.514 185 109 5 24 196 2 184 2.68e-17 81.3
MS.gene32587.t1 AT5G38590 33.168 202 111 8 24 206 2 198 5.10e-17 79.3
MS.gene32587.t1 AT3G59240 29.902 204 107 8 23 201 7 199 6.65e-17 80.5
MS.gene32587.t1 AT5G38590 33.168 202 111 8 24 206 2 198 8.20e-17 79.7
MS.gene32587.t1 AT1G51370 30.270 185 123 4 15 196 10 191 9.53e-17 79.3
MS.gene32587.t1 AT1G66290 29.902 204 122 8 3 194 7 201 1.22e-16 79.3
MS.gene32587.t1 AT4G00315 32.973 185 112 6 24 196 2 186 1.27e-16 79.3
MS.gene32587.t1 AT5G56560 34.343 198 114 6 21 206 2 195 1.29e-16 79.7
MS.gene32587.t1 AT1G51370 30.270 185 123 4 15 196 10 191 1.49e-16 79.0
MS.gene32587.t1 AT1G51370 30.270 185 123 4 15 196 10 191 1.50e-16 79.3
MS.gene32587.t1 AT1G48400 33.333 192 111 7 24 200 10 199 1.54e-16 79.3
MS.gene32587.t1 AT5G22610 30.108 186 118 4 23 196 17 202 1.72e-16 79.0
MS.gene32587.t1 AT3G58860 33.503 197 107 8 19 196 2 193 1.85e-16 79.0
MS.gene32587.t1 AT1G48400 33.333 192 111 7 24 200 10 199 1.88e-16 79.0
MS.gene32587.t1 AT5G56380 35.263 190 103 7 24 196 2 188 1.89e-16 79.0
MS.gene32587.t1 AT5G56380 35.263 190 103 7 24 196 2 188 1.89e-16 79.0
MS.gene32587.t1 AT1G69630 32.275 189 110 6 21 196 15 198 1.91e-16 79.0
MS.gene32587.t1 AT5G22610 30.108 186 118 4 23 196 17 202 1.98e-16 79.0
MS.gene32587.t1 AT1G13780 32.474 194 107 7 24 196 10 200 2.10e-16 78.2
MS.gene32587.t1 AT4G09920 32.418 182 113 4 24 196 2 182 2.31e-16 77.4
MS.gene32587.t1 AT4G09920 32.418 182 113 4 24 196 2 182 2.31e-16 77.4
MS.gene32587.t1 AT4G09920 32.418 182 113 4 24 196 2 182 2.31e-16 77.4
MS.gene32587.t1 AT1G13780 32.474 194 107 7 24 196 10 200 2.67e-16 78.6
MS.gene32587.t1 AT2G04230 33.158 190 108 8 23 196 12 198 3.45e-16 78.2
MS.gene32587.t1 AT3G26922 31.707 205 87 8 23 206 13 185 3.62e-16 76.6
MS.gene32587.t1 AT4G09920 32.418 182 113 4 24 196 2 182 4.05e-16 77.0
MS.gene32587.t1 AT4G09920 32.418 182 113 4 24 196 2 182 4.05e-16 77.0
MS.gene32587.t1 AT3G56780 32.402 179 109 6 26 196 9 183 4.13e-16 77.8
MS.gene32587.t1 AT5G56560 35.135 185 107 5 21 196 2 182 4.53e-16 77.8
MS.gene32587.t1 AT3G56780 32.402 179 109 6 26 196 9 183 4.96e-16 77.8
MS.gene32587.t1 AT3G56780 32.402 179 109 6 26 196 9 183 7.77e-16 77.0
MS.gene32587.t1 AT5G53840 31.720 186 114 6 19 196 13 193 7.85e-16 77.0
MS.gene32587.t1 AT5G25850 31.217 189 110 7 24 201 20 199 8.38e-16 77.0
MS.gene32587.t1 AT3G60040 32.683 205 106 8 24 199 13 214 1.16e-15 77.0
MS.gene32587.t1 AT3G49040 32.161 199 98 5 21 196 14 198 1.19e-15 75.9
MS.gene32587.t1 AT5G44490 28.421 190 120 6 20 196 13 199 1.23e-15 76.6
MS.gene32587.t1 AT3G60040 32.683 205 106 8 24 199 232 433 1.35e-15 76.6
MS.gene32587.t1 AT3G60040 32.683 205 106 8 24 199 233 434 1.36e-15 76.6
MS.gene32587.t1 AT5G44490 28.421 190 120 6 20 196 13 199 1.59e-15 76.3
MS.gene32587.t1 AT3G60040 32.683 205 106 8 24 199 230 431 1.97e-15 76.3
MS.gene32587.t1 AT3G60040 32.683 205 106 8 24 199 232 433 1.99e-15 76.3
MS.gene32587.t1 AT3G50710 33.155 187 108 6 24 196 2 185 2.29e-15 75.9
MS.gene32587.t1 AT5G56370 36.126 191 101 9 24 202 2 183 2.43e-15 75.1
MS.gene32587.t1 AT3G59190 32.663 199 109 9 19 196 7 201 2.51e-15 75.5
MS.gene32587.t1 AT5G56370 36.126 191 101 9 24 202 2 183 2.75e-15 75.5
MS.gene32587.t1 AT5G56370 36.126 191 101 9 24 202 2 183 2.75e-15 75.5
MS.gene32587.t1 AT5G27750 31.959 194 106 7 24 196 5 193 3.29e-15 75.1
MS.gene32587.t1 AT3G51530 28.723 282 135 11 23 248 29 300 3.41e-15 75.1
MS.gene32587.t1 AT5G27750 31.959 194 106 7 24 196 5 193 3.56e-15 75.1
MS.gene32587.t1 AT5G41630 31.841 201 102 8 24 196 12 205 4.15e-15 75.1
MS.gene32587.t1 AT3G59190 32.663 199 109 9 19 196 7 201 4.48e-15 75.1
MS.gene32587.t1 AT3G42770 32.474 194 103 7 26 196 1 189 4.94e-15 75.1
MS.gene32587.t1 AT3G58900 32.642 193 106 9 24 197 2 189 6.18e-15 73.6
MS.gene32587.t1 AT3G58900 32.143 196 109 9 24 200 2 192 6.98e-15 73.6
MS.gene32587.t1 AT3G58900 32.143 196 109 9 24 200 2 192 6.98e-15 73.6
MS.gene32587.t1 AT5G22670 32.432 185 113 6 23 199 10 190 7.60e-15 74.3
MS.gene32587.t1 AT2G42720 31.651 218 123 7 24 222 2 212 7.75e-15 74.3
MS.gene32587.t1 AT3G59210 32.995 197 108 9 19 196 2 193 9.06e-15 73.9
MS.gene32587.t1 AT3G59210 32.995 197 108 9 19 196 2 193 9.06e-15 73.9
MS.gene32587.t1 AT3G59210 32.995 197 108 9 19 196 2 193 9.06e-15 73.9
MS.gene32587.t1 AT3G59210 32.995 197 108 9 19 196 2 193 9.06e-15 73.9
MS.gene32587.t1 AT3G59210 32.995 197 108 9 19 196 2 193 9.06e-15 73.9
MS.gene32587.t1 AT3G44060 31.280 211 123 8 26 220 1 205 9.44e-15 73.9
MS.gene32587.t1 AT1G78750 31.818 198 110 8 22 199 16 208 1.42e-14 73.6
MS.gene32587.t1 AT1G78750 31.818 198 110 8 22 199 16 208 1.42e-14 73.6
MS.gene32587.t1 AT4G22280 33.333 180 112 4 24 196 2 180 1.49e-14 73.2
MS.gene32587.t1 AT5G25860 29.612 206 115 6 24 201 12 215 1.51e-14 73.2
MS.gene32587.t1 AT3G03040 29.956 227 129 9 24 230 2 218 1.58e-14 73.2
MS.gene32587.t1 AT3G58900 32.000 200 112 9 24 204 2 196 1.62e-14 73.2
MS.gene32587.t1 AT4G15060 30.583 206 124 6 5 196 9 209 1.63e-14 73.2
MS.gene32587.t1 AT4G22280 33.333 180 112 4 24 196 2 180 1.72e-14 72.4
MS.gene32587.t1 AT5G56820 32.973 185 116 6 18 197 9 190 1.93e-14 73.2
MS.gene32587.t1 AT1G66300 27.111 225 129 10 3 205 7 218 2.69e-14 72.8
MS.gene32587.t1 AT3G59230 27.723 202 123 6 23 202 11 211 2.92e-14 72.4
MS.gene32587.t1 AT3G49030 30.435 184 118 5 22 196 19 201 7.65e-14 71.2
MS.gene32587.t1 AT3G49030 30.435 184 118 5 22 196 19 201 7.94e-14 71.2
MS.gene32587.t1 AT4G15060 32.086 187 110 5 24 196 172 355 8.59e-14 71.2
MS.gene32587.t1 AT4G13965 32.222 180 112 6 24 196 10 186 1.09e-13 70.9
MS.gene32587.t1 AT4G27050 30.348 201 113 5 22 196 2 201 1.26e-13 70.5
MS.gene32587.t1 AT4G27050 30.348 201 113 5 22 196 2 201 1.26e-13 70.5
MS.gene32587.t1 AT4G27050 30.348 201 113 5 22 196 2 201 1.26e-13 70.5
MS.gene32587.t1 AT4G27050 30.348 201 113 5 22 196 2 201 1.26e-13 70.5
MS.gene32587.t1 AT4G27050 30.348 201 113 5 22 196 2 201 1.26e-13 70.5
MS.gene32587.t1 AT5G22730 29.348 184 117 6 23 196 27 207 1.62e-13 70.5
MS.gene32587.t1 AT5G22730 29.348 184 117 6 23 196 27 207 1.62e-13 70.5
MS.gene32587.t1 AT5G22730 29.348 184 117 6 23 196 27 207 1.86e-13 70.1
MS.gene32587.t1 AT5G38390 33.155 187 114 7 24 204 2 183 1.98e-13 70.1
MS.gene32587.t1 AT5G38392 34.158 202 105 11 24 201 2 199 2.03e-13 68.2
MS.gene32587.t1 AT2G42730 30.964 197 108 9 23 196 4 195 2.32e-13 69.7
MS.gene32587.t1 AT1G78760 28.191 188 116 6 22 196 14 195 2.65e-13 69.7
MS.gene32587.t1 AT4G13960 32.461 191 105 8 24 196 2 186 3.22e-13 69.3
MS.gene32587.t1 AT4G13960 32.461 191 105 8 24 196 2 186 3.22e-13 69.3
MS.gene32587.t1 AT5G56440 33.696 184 108 6 24 196 2 182 3.43e-13 69.3
MS.gene32587.t1 AT3G59000 33.523 176 92 8 24 177 2 174 3.43e-13 69.3
MS.gene32587.t1 AT3G49150 28.141 199 114 9 19 196 11 201 3.79e-13 69.3
MS.gene32587.t1 AT5G56690 30.978 184 114 6 26 196 4 187 4.26e-13 68.9
MS.gene32587.t1 AT1G80470 28.037 214 128 8 14 206 5 213 4.51e-13 68.9
MS.gene32587.t1 AT3G58930 31.282 195 94 8 24 204 2 170 5.60e-13 68.6
MS.gene32587.t1 AT3G58930 31.282 195 94 8 24 204 2 170 5.60e-13 68.6
MS.gene32587.t1 AT2G29930 30.645 186 107 7 24 196 12 188 9.17e-13 68.2
MS.gene32587.t1 AT2G29930 30.645 186 107 7 24 196 12 188 9.17e-13 68.2
MS.gene32587.t1 AT5G22720 27.419 186 121 5 22 196 21 203 1.29e-12 67.8
MS.gene32587.t1 AT3G58960 30.319 188 111 8 24 196 2 184 1.32e-12 67.8
MS.gene32587.t1 AT3G58980 31.250 192 105 9 24 196 2 185 1.49e-12 67.8
MS.gene32587.t1 AT1G55030 30.726 179 115 4 24 196 19 194 1.51e-12 67.4
MS.gene32587.t1 AT1G55030 30.726 179 115 4 24 196 9 184 1.90e-12 67.0
MS.gene32587.t1 AT3G44810 31.053 190 110 7 26 196 9 196 2.29e-12 67.0
MS.gene32587.t1 AT1G64540 35.165 182 101 10 26 200 7 178 2.30e-12 67.0
MS.gene32587.t1 AT1G64540 35.165 182 101 10 26 200 7 178 2.30e-12 67.0
MS.gene32587.t1 AT3G26922 30.526 190 100 9 40 206 1 181 2.42e-12 65.9
MS.gene32587.t1 AT3G26922 30.526 190 100 9 40 206 1 181 2.42e-12 65.9
MS.gene32587.t1 AT5G38396 31.841 201 101 11 24 196 2 194 2.59e-12 66.6
MS.gene32587.t1 AT3G49020 31.683 202 117 7 22 206 20 217 2.65e-12 66.6
MS.gene32587.t1 AT5G18780 29.121 182 117 4 23 196 10 187 2.78e-12 66.6
MS.gene32587.t1 AT5G18780 29.121 182 117 4 23 196 10 187 2.78e-12 66.6
MS.gene32587.t1 AT3G14710 29.756 205 116 8 20 210 22 212 2.89e-12 66.6
MS.gene32587.t1 AT1G19070 42.169 83 44 2 24 103 2 83 3.15e-12 61.6
MS.gene32587.t1 AT5G02700 31.250 192 99 8 21 196 24 198 3.18e-12 66.6
MS.gene32587.t1 AT1G60400 28.108 185 118 6 24 196 14 195 3.19e-12 66.2
MS.gene32587.t1 AT1G22000 33.333 192 115 8 14 196 16 203 3.34e-12 66.2
MS.gene32587.t1 AT5G18780 29.121 182 117 4 23 196 10 187 3.47e-12 66.2
MS.gene32587.t1 AT5G18780 29.121 182 117 4 23 196 10 187 3.47e-12 66.2
MS.gene32587.t1 AT5G50270 32.836 201 116 7 24 206 2 201 3.80e-12 65.5
MS.gene32587.t1 AT5G50270 33.880 183 110 5 24 196 2 183 6.38e-12 65.5
MS.gene32587.t1 AT1G78730 25.269 186 100 5 24 196 22 181 6.54e-12 65.5
MS.gene32587.t1 AT3G58920 27.273 209 110 8 24 201 2 199 9.51e-12 65.1
MS.gene32587.t1 AT3G59000 36.752 117 60 5 24 127 2 117 1.27e-11 64.3
MS.gene32587.t1 AT5G15620 30.481 187 105 8 24 196 2 177 1.36e-11 64.7
MS.gene32587.t1 AT1G50980 32.727 165 82 6 15 175 22 161 1.39e-11 64.3
MS.gene32587.t1 AT1G66320 27.041 196 127 7 14 196 15 207 1.57e-11 64.3
MS.gene32587.t1 AT5G56810 31.915 188 118 6 18 196 9 195 1.83e-11 63.5
MS.gene32587.t1 AT5G56810 31.915 188 118 6 18 196 9 195 2.51e-11 63.9
MS.gene32587.t1 AT1G16940 26.396 197 123 5 17 201 4 190 4.62e-11 62.8
MS.gene32587.t1 AT5G02930 30.270 185 104 8 24 196 28 199 5.03e-11 62.8
MS.gene32587.t1 AT3G03030 28.718 195 113 8 24 196 2 192 5.27e-11 62.4
MS.gene32587.t1 AT1G60410 29.167 192 118 8 19 196 5 192 8.58e-11 62.0
MS.gene32587.t1 AT3G58820 35.043 117 62 4 24 127 2 117 9.62e-11 62.0

Find 74 sgRNAs with CRISPR-Local

Find 93 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATACCTTGTCGTGTGTTTC+TGG 0.090694 3.1:-85399079 MS.gene32587:CDS
TCCATCTGTTTCACATATTA+TGG 0.165550 3.1:-85399171 MS.gene32587:CDS
CACACGACAAGGTATCTTTA+TGG 0.236534 3.1:+85399086 None:intergenic
TCCCTACGGCTTTCATTCTA+AGG 0.250763 3.1:-85399290 MS.gene32587:CDS
GCCAACAAGCTTATCCAATT+TGG 0.334639 3.1:-85399046 MS.gene32587:CDS
TTGGAAAAGGTTACAGTCTC+TGG 0.339449 3.1:+85399471 None:intergenic
TCACATATTATGGACATATC+AGG 0.341356 3.1:-85399161 MS.gene32587:CDS
ATGTTATCCTCTTCAATTTG+AGG 0.360335 3.1:+85399250 None:intergenic
TGTCACGGCGGCTGCGGCAG+CGG 0.366954 3.1:-85399689 MS.gene32587:CDS
TGCTTCCAACTCTTGTAGAA+TGG 0.387005 3.1:+85399119 None:intergenic
AATGTTAGCTCTGACCAAAT+TGG 0.390378 3.1:+85399032 None:intergenic
TGTAGTAGTGACACTTGATA+TGG 0.393009 3.1:+85399394 None:intergenic
ATACCTTGTCGTGTGTTTCT+GGG 0.397938 3.1:-85399078 MS.gene32587:CDS
CCATAGCGGTTTCCACCTCT+TGG 0.405216 3.1:+85399533 None:intergenic
CCGCGATGTCACGGCGGCTG+CGG 0.419082 3.1:-85399695 None:intergenic
AGACAGAATCAGTGCTCTTC+CGG 0.422094 3.1:-85399622 MS.gene32587:CDS
ATGTGAAACAGATGGATTCC+AGG 0.435339 3.1:+85399178 None:intergenic
CACGGCGGCTGCGGCAGCGG+CGG 0.438047 3.1:-85399686 MS.gene32587:CDS
GTGGAAACCGCTATGGCTCT+TGG 0.439890 3.1:-85399526 MS.gene32587:CDS
GCTTCCAACTCTTGTAGAAT+GGG 0.440611 3.1:+85399120 None:intergenic
TTTGAGGACAGACAAGGTTT+CGG 0.443242 3.1:+85399266 None:intergenic
GGAGAGGATGGTTGTGGAGG+CGG 0.445656 3.1:+85399554 None:intergenic
CGCAAGTAGGCGCATATGTT+GGG 0.450467 3.1:+85398963 None:intergenic
ACCAAATTGGATAAGCTTGT+TGG 0.450733 3.1:+85399045 None:intergenic
TAGCATTAGAAACAAATTTG+TGG 0.474187 3.1:+85399361 None:intergenic
CCTCTTGGAGAGGATGGTTG+TGG 0.476562 3.1:+85399548 None:intergenic
ATTATGCATGGGAGAGATGT+TGG 0.483648 3.1:+85399008 None:intergenic
CCGCAAGTAGGCGCATATGT+TGG 0.484727 3.1:+85398962 None:intergenic
CACTCTTCGCCGCGATGTCA+CGG 0.485959 3.1:-85399704 None:intergenic
TTTCCACCTCTTGGAGAGGA+TGG 0.496918 3.1:+85399542 None:intergenic
ATATGATGAACAAGTGAGTC+CGG 0.502688 3.1:+85399603 None:intergenic
CAACTTCGTCGACTCACTCA+TGG 0.505897 3.1:-85399451 MS.gene32587:CDS
GGCGTCTTTCGACGGAAGAA+AGG 0.516491 3.1:+85399575 None:intergenic
AGCGGGAGAGATCAATGGTT+AGG 0.516583 3.1:+85399319 None:intergenic
GTGGAGGCGGCGTCTTTCGA+CGG 0.519264 3.1:+85399567 None:intergenic
CATGAGTGAGTCGACGAAGT+TGG 0.539453 3.1:+85399452 None:intergenic
GTTTCACAATTTAACCCACC+TGG 0.541909 3.1:-85398651 MS.gene32587:CDS
GTCGCTCAAACTCCTTCACC+TGG 0.548571 3.1:-85399196 MS.gene32587:CDS
TGAGTCGACGAAGTTGGAAA+AGG 0.554868 3.1:+85399458 None:intergenic
CTTCAATTTGAGGACAGACA+AGG 0.555021 3.1:+85399260 None:intergenic
TAAAGTTCAATGTAAGCTCC+AGG 0.559639 3.1:+85398633 None:intergenic
ATCTGAGCGGGAGAGATCAA+TGG 0.565352 3.1:+85399314 None:intergenic
CCAAGAGGTGGAAACCGCTA+TGG 0.565646 3.1:-85399533 MS.gene32587:CDS
ATGTCCCATTCTACAAGAGT+TGG 0.565975 3.1:-85399124 MS.gene32587:CDS
CTCCCGCTCAGATTTCCCTA+CGG 0.568994 3.1:-85399304 MS.gene32587:CDS
GCGATCAAGCAAATTATGCA+TGG 0.570982 3.1:+85398996 None:intergenic
AGCCGTAGGGAAATCTGAGC+GGG 0.573586 3.1:+85399302 None:intergenic
TCCATAATATGTGAAACAGA+TGG 0.573720 3.1:+85399170 None:intergenic
AAAGGTTACAGTCTCTGGAA+AGG 0.577336 3.1:+85399476 None:intergenic
GACACTTGATATGGAATGAG+AGG 0.580314 3.1:+85399403 None:intergenic
AAGGTTACAGTCTCTGGAAA+GGG 0.582606 3.1:+85399477 None:intergenic
AGCGACGGAAGATCAACGAC+AGG 0.590697 3.1:+85399213 None:intergenic
CGATCAAGCAAATTATGCAT+GGG 0.597728 3.1:+85398997 None:intergenic
TGTCTGTCCTCAAATTGAAG+AGG 0.599406 3.1:-85399257 MS.gene32587:CDS
TCCTTAGAATGAAAGCCGTA+GGG 0.602699 3.1:+85399289 None:intergenic
AACAGATGGATTCCAGGTGA+AGG 0.605969 3.1:+85399184 None:intergenic
GCATATGTTGGGCGTTACGA+AGG 0.606778 3.1:+85398974 None:intergenic
TTACAGTCTCTGGAAAGGGT+TGG 0.607618 3.1:+85399481 None:intergenic
CCAACATATGCGCCTACTTG+CGG 0.611512 3.1:-85398962 MS.gene32587:intron
GAAAGGGTTGGTGATTGAAG+TGG 0.612668 3.1:+85399493 None:intergenic
GCGGTTTCCACCTCTTGGAG+AGG 0.613621 3.1:+85399538 None:intergenic
CAACCATCCTCTCCAAGAGG+TGG 0.618548 3.1:-85399545 MS.gene32587:CDS
GTCCTTAGAATGAAAGCCGT+AGG 0.619468 3.1:+85399288 None:intergenic
TTGATATGGAATGAGAGGAT+AGG 0.621762 3.1:+85399408 None:intergenic
CTTGGAGAGGATGGTTGTGG+AGG 0.631716 3.1:+85399551 None:intergenic
GAACCCAGAAACACACGACA+AGG 0.636895 3.1:+85399075 None:intergenic
AGGATAACATTGAACTACGA+AGG 0.654558 3.1:-85399237 MS.gene32587:CDS
GTTCAATGTAAGCTCCAGGT+GGG 0.655993 3.1:+85398637 None:intergenic
AGGTGAAGGAGTTTGAGCGA+CGG 0.665820 3.1:+85399198 None:intergenic
AGTTCAATGTAAGCTCCAGG+TGG 0.666124 3.1:+85398636 None:intergenic
CCACAACCATCCTCTCCAAG+AGG 0.673281 3.1:-85399548 MS.gene32587:CDS
ATGAGTTCCAAGAGCCATAG+CGG 0.682661 3.1:+85399519 None:intergenic
AAGCCGTAGGGAAATCTGAG+CGG 0.734235 3.1:+85399301 None:intergenic
TCTTCGCCGCGATGTCACGG+CGG 0.759764 3.1:-85399701 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTACTAGTTCAAATTTA+AGG - chr3.1:85399411-85399430 MS.gene32587:CDS 15.0%
!! AAATTACTTGTTCAAATTTA+AGG - chr3.1:85399456-85399475 MS.gene32587:CDS 15.0%
!! AATTACTAGTTCAAATTTAA+GGG - chr3.1:85399412-85399431 MS.gene32587:CDS 15.0%
!! AATTACTTGTTCAAATTTAA+GGG - chr3.1:85399457-85399476 MS.gene32587:CDS 15.0%
!! TTAAATTTGAACAAGTAATT+TGG + chr3.1:85399457-85399476 None:intergenic 15.0%
!! TTAAATTTGAACTAGTAATT+TGG + chr3.1:85399412-85399431 None:intergenic 15.0%
! AACTAGTAATTTGGTCATAT+AGG + chr3.1:85399403-85399422 None:intergenic 25.0%
! TAGCATTAGAAACAAATTTG+TGG + chr3.1:85398958-85398977 None:intergenic 25.0%
! TGCTTATATGACCAAATTAT+TGG - chr3.1:85399496-85399515 MS.gene32587:CDS 25.0%
!! ATGACCAAATTATTGGTTAA+GGG - chr3.1:85399503-85399522 MS.gene32587:CDS 25.0%
!! TATGACCAAATTATTGGTTA+AGG - chr3.1:85399502-85399521 MS.gene32587:CDS 25.0%
ATGTTATCCTCTTCAATTTG+AGG + chr3.1:85399069-85399088 None:intergenic 30.0%
ATTTCTCTAACTATGAGTGT+GGG - chr3.1:85399537-85399556 MS.gene32587:CDS 30.0%
CACAAAGACAAAATATTGCA+GGG + chr3.1:85399609-85399628 None:intergenic 30.0%
TACTCCCTTAACCAATAATT+TGG + chr3.1:85399510-85399529 None:intergenic 30.0%
TATTTCTCTAACTATGAGTG+TGG - chr3.1:85399536-85399555 MS.gene32587:CDS 30.0%
TCACAAAGACAAAATATTGC+AGG + chr3.1:85399610-85399629 None:intergenic 30.0%
TCACATATTATGGACATATC+AGG - chr3.1:85399155-85399174 MS.gene32587:CDS 30.0%
TCCATAATATGTGAAACAGA+TGG + chr3.1:85399149-85399168 None:intergenic 30.0%
TCCATCTGTTTCACATATTA+TGG - chr3.1:85399145-85399164 MS.gene32587:CDS 30.0%
! CATATCAGGAAACTTTTATC+TGG - chr3.1:85399169-85399188 MS.gene32587:CDS 30.0%
!!! AGGTTGAGTGTTATTTTGAT+TGG + chr3.1:85398891-85398910 None:intergenic 30.0%
ACCAAATTGGATAAGCTTGT+TGG + chr3.1:85399274-85399293 None:intergenic 35.0%
AGGATAACATTGAACTACGA+AGG - chr3.1:85399079-85399098 MS.gene32587:CDS 35.0%
ATATGATGAACAAGTGAGTC+CGG + chr3.1:85398716-85398735 None:intergenic 35.0%
CGATCAAGCAAATTATGCAT+GGG + chr3.1:85399322-85399341 None:intergenic 35.0%
TAAAGTTCAATGTAAGCTCC+AGG + chr3.1:85399686-85399705 None:intergenic 35.0%
TCTTCTTCTTCTTCTTCTTC+TGG + chr3.1:85398674-85398693 None:intergenic 35.0%
TGTAGTAGTGACACTTGATA+TGG + chr3.1:85398925-85398944 None:intergenic 35.0%
TTGATATGGAATGAGAGGAT+AGG + chr3.1:85398911-85398930 None:intergenic 35.0%
! TTTTGATACATACCGCAAGT+AGG + chr3.1:85399369-85399388 None:intergenic 35.0%
!! AATGTTAGCTCTGACCAAAT+TGG + chr3.1:85399287-85399306 None:intergenic 35.0%
ATACCTTGTCGTGTGTTTCT+GGG - chr3.1:85399238-85399257 MS.gene32587:CDS 40.0%
ATGTCCCATTCTACAAGAGT+TGG - chr3.1:85399192-85399211 MS.gene32587:CDS 40.0%
ATTATGCATGGGAGAGATGT+TGG + chr3.1:85399311-85399330 None:intergenic 40.0%
CAGGGATGCGTAGAAAAAAA+TGG + chr3.1:85399591-85399610 None:intergenic 40.0%
CTTCAATTTGAGGACAGACA+AGG + chr3.1:85399059-85399078 None:intergenic 40.0%
GACACTTGATATGGAATGAG+AGG + chr3.1:85398916-85398935 None:intergenic 40.0%
GCCAACAAGCTTATCCAATT+TGG - chr3.1:85399270-85399289 MS.gene32587:CDS 40.0%
GCGATCAAGCAAATTATGCA+TGG + chr3.1:85399323-85399342 None:intergenic 40.0%
GCTTCCAACTCTTGTAGAAT+GGG + chr3.1:85399199-85399218 None:intergenic 40.0%
GGATGCGTAGAAAAAAATGG+CGG + chr3.1:85399588-85399607 None:intergenic 40.0%
GTTTCACAATTTAACCCACC+TGG - chr3.1:85399665-85399684 MS.gene32587:CDS 40.0%
TCCTTAGAATGAAAGCCGTA+GGG + chr3.1:85399030-85399049 None:intergenic 40.0%
TGCTTCCAACTCTTGTAGAA+TGG + chr3.1:85399200-85399219 None:intergenic 40.0%
TGTCTGTCCTCAAATTGAAG+AGG - chr3.1:85399059-85399078 MS.gene32587:CDS 40.0%
TTGGAAAAGGTTACAGTCTC+TGG + chr3.1:85398848-85398867 None:intergenic 40.0%
TTTGAGGACAGACAAGGTTT+CGG + chr3.1:85399053-85399072 None:intergenic 40.0%
! AAAAAAATGGCGGAGAACAC+AGG + chr3.1:85399578-85399597 None:intergenic 40.0%
! AAAGGTTACAGTCTCTGGAA+AGG + chr3.1:85398843-85398862 None:intergenic 40.0%
! AAGGTTACAGTCTCTGGAAA+GGG + chr3.1:85398842-85398861 None:intergenic 40.0%
! ATGTGAAACAGATGGATTCC+AGG + chr3.1:85399141-85399160 None:intergenic 40.0%
! CACACGACAAGGTATCTTTA+TGG + chr3.1:85399233-85399252 None:intergenic 40.0%
AGACAGAATCAGTGCTCTTC+CGG - chr3.1:85398694-85398713 MS.gene32587:intron 45.0%
AGTTCAATGTAAGCTCCAGG+TGG + chr3.1:85399683-85399702 None:intergenic 45.0%
ATGAGTTCCAAGAGCCATAG+CGG + chr3.1:85398800-85398819 None:intergenic 45.0%
GATACCTTGTCGTGTGTTTC+TGG - chr3.1:85399237-85399256 MS.gene32587:CDS 45.0%
GTCCTTAGAATGAAAGCCGT+AGG + chr3.1:85399031-85399050 None:intergenic 45.0%
GTTCAATGTAAGCTCCAGGT+GGG + chr3.1:85399682-85399701 None:intergenic 45.0%
TCCCTACGGCTTTCATTCTA+AGG - chr3.1:85399026-85399045 MS.gene32587:CDS 45.0%
TGAGTCGACGAAGTTGGAAA+AGG + chr3.1:85398861-85398880 None:intergenic 45.0%
! AACAGATGGATTCCAGGTGA+AGG + chr3.1:85399135-85399154 None:intergenic 45.0%
! TTACAGTCTCTGGAAAGGGT+TGG + chr3.1:85398838-85398857 None:intergenic 45.0%
!! GAAAGGGTTGGTGATTGAAG+TGG + chr3.1:85398826-85398845 None:intergenic 45.0%
AAGCCGTAGGGAAATCTGAG+CGG + chr3.1:85399018-85399037 None:intergenic 50.0%
AGCGGGAGAGATCAATGGTT+AGG + chr3.1:85399000-85399019 None:intergenic 50.0%
AGGTGAAGGAGTTTGAGCGA+CGG + chr3.1:85399121-85399140 None:intergenic 50.0%
ATCTGAGCGGGAGAGATCAA+TGG + chr3.1:85399005-85399024 None:intergenic 50.0%
CATGAGTGAGTCGACGAAGT+TGG + chr3.1:85398867-85398886 None:intergenic 50.0%
CCAACATATGCGCCTACTTG+CGG - chr3.1:85399354-85399373 MS.gene32587:CDS 50.0%
CGCAAGTAGGCGCATATGTT+GGG + chr3.1:85399356-85399375 None:intergenic 50.0%
GAACCCAGAAACACACGACA+AGG + chr3.1:85399244-85399263 None:intergenic 50.0%
GCATATGTTGGGCGTTACGA+AGG + chr3.1:85399345-85399364 None:intergenic 50.0%
TTTCCACCTCTTGGAGAGGA+TGG + chr3.1:85398777-85398796 None:intergenic 50.0%
!! CAACTTCGTCGACTCACTCA+TGG - chr3.1:85398865-85398884 MS.gene32587:intron 50.0%
AGCCGTAGGGAAATCTGAGC+GGG + chr3.1:85399017-85399036 None:intergenic 55.0%
AGCGACGGAAGATCAACGAC+AGG + chr3.1:85399106-85399125 None:intergenic 55.0%
CAACCATCCTCTCCAAGAGG+TGG - chr3.1:85398771-85398790 MS.gene32587:intron 55.0%
CCAAGAGGTGGAAACCGCTA+TGG - chr3.1:85398783-85398802 MS.gene32587:intron 55.0%
CCACAACCATCCTCTCCAAG+AGG - chr3.1:85398768-85398787 MS.gene32587:intron 55.0%
CCATAGCGGTTTCCACCTCT+TGG + chr3.1:85398786-85398805 None:intergenic 55.0%
CCGCAAGTAGGCGCATATGT+TGG + chr3.1:85399357-85399376 None:intergenic 55.0%
CCTCTTGGAGAGGATGGTTG+TGG + chr3.1:85398771-85398790 None:intergenic 55.0%
CTCCCGCTCAGATTTCCCTA+CGG - chr3.1:85399012-85399031 MS.gene32587:CDS 55.0%
CTTGGAGAGGATGGTTGTGG+AGG + chr3.1:85398768-85398787 None:intergenic 55.0%
GGCGTCTTTCGACGGAAGAA+AGG + chr3.1:85398744-85398763 None:intergenic 55.0%
GTCGCTCAAACTCCTTCACC+TGG - chr3.1:85399120-85399139 MS.gene32587:CDS 55.0%
GTGGAAACCGCTATGGCTCT+TGG - chr3.1:85398790-85398809 MS.gene32587:intron 55.0%
GCGGTTTCCACCTCTTGGAG+AGG + chr3.1:85398781-85398800 None:intergenic 60.0%
GGAGAGGATGGTTGTGGAGG+CGG + chr3.1:85398765-85398784 None:intergenic 60.0%
GTGGAGGCGGCGTCTTTCGA+CGG + chr3.1:85398752-85398771 None:intergenic 65.0%
TGTCACGGCGGCTGCGGCAG+CGG - chr3.1:85398627-85398646 MS.gene32587:CDS 75.0%
! CACGGCGGCTGCGGCAGCGG+CGG - chr3.1:85398630-85398649 MS.gene32587:CDS 85.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 85398626 85399712 85398626 ID=MS.gene32587
chr3.1 mRNA 85398626 85399712 85398626 ID=MS.gene32587.t1;Parent=MS.gene32587
chr3.1 exon 85398963 85399712 85398963 ID=MS.gene32587.t1.exon1;Parent=MS.gene32587.t1
chr3.1 CDS 85398963 85399712 85398963 ID=cds.MS.gene32587.t1;Parent=MS.gene32587.t1
chr3.1 exon 85398626 85398676 85398626 ID=MS.gene32587.t1.exon2;Parent=MS.gene32587.t1
chr3.1 CDS 85398626 85398676 85398626 ID=cds.MS.gene32587.t1;Parent=MS.gene32587.t1
Gene Sequence

>MS.gene32587

ATGTCACGGCGGCTGCGGCAGCGGCGGCAGCTGCAGCTTTCAATTCCAGAAGAAGAAGAAGAAGAAGAAGACAGAATCAGTGCTCTTCCGGACTCACTTGTTCATCATATTCTCTCCTTTCTTCCGTCGAAAGACGCCGCCTCCACAACCATCCTCTCCAAGAGGTGGAAACCGCTATGGCTCTTGGAACTCATCATCCACTTCAATCACCAACCCTTTCCAGAGACTGTAACCTTTTCCAACTTCGTCGACTCACTCATGGCCAATCAAAATAACACTCAACCTATCCTCTCATTCCATATCAAGTGTCACTACTACAATTGTGATATCCACAAATTTGTTTCTAATGCTATTCAACGACGAGTTCAAAACCTAACCATTGATCTCTCCCGCTCAGATTTCCCTACGGCTTTCATTCTAAGGACCGAAACCTTGTCTGTCCTCAAATTGAAGAGGATAACATTGAACTACGAAGGTCCTGTCGTTGATCTTCCGTCGCTCAAACTCCTTCACCTGGAATCCATCTGTTTCACATATTATGGACATATCAGGAAACTTTTATCTGGATGTCCCATTCTACAAGAGTTGGAAGCAAATGATCTAACCATAAAGATACCTTGTCGTGTGTTTCTGGGTTCTTCACAGCCAACAAGCTTATCCAATTTGGTCAGAGCTAACATTTCCAACATCTCTCCCATGCATAATTTGCTTGATCGCCTTCGTAACGCCCAACATATGCGCCTACTTGCGGTATGTATCAAAATATTTTTTCTGCCTATATGACCAAATTACTAGTTCAAATTTAAGGGATTTTTTCTGCTTATATGACCAAATTACTTGTTCAAATTTAAGGGAATATTTTTTTTTTTTTGCTTATATGACCAAATTATTGGTTAAGGGAGTAAATTTTTATTTCTCTAACTATGAGTGTGGGTGTCAAAACTTCAAACCTGTGTTCTCCGCCATTTTTTTCTACGCATCCCTGCAATATTTTGTCTTTGTGACTGATGCAGAAGTATTCATATGAACTACATAGCGTGTTTCACAATTTAACCCACCTGGAGCTTACATTGAACTTTATGCCTAA

Protein sequence

>MS.gene32587.t1

MSRRLRQRRQLQLSIPEEEEEEEDRISALPDSLVHHILSFLPSKDAASTTILSKRWKPLWLLELIIHFNHQPFPETVTFSNFVDSLMANQNNTQPILSFHIKCHYYNCDIHKFVSNAIQRRVQNLTIDLSRSDFPTAFILRTETLSVLKLKRITLNYEGPVVDLPSLKLLHLESICFTYYGHIRKLLSGCPILQELEANDLTIKIPCRVFLGSSQPTSLSNLVRANISNISPMHNLLDRLRNAQHMRLLARVSQFNPPGAYIELYA