Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42125.t1 | ACU18580.1 | 84.6 | 39 | 6 | 0 | 5 | 43 | 199 | 237 | 5.10E-08 | 67.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42125.t1 | A0A0B2QEG0 | 84.6 | 39 | 6 | 0 | 5 | 43 | 199 | 237 | 3.7e-08 | 67.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene42125 | 0.803623 | 3.19E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene42125 | 0.882392 | 1.08E-70 | -1.69E-46 |
| MS.gene049255 | MS.gene42125 | 0.801985 | 6.95E-49 | -1.69E-46 |
| MS.gene049404 | MS.gene42125 | 0.805499 | 1.30E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene42125 | 0.833562 | 4.97E-56 | -1.69E-46 |
| MS.gene049452 | MS.gene42125 | 0.816394 | 5.66E-52 | -1.69E-46 |
| MS.gene049821 | MS.gene42125 | 0.817665 | 2.93E-52 | -1.69E-46 |
| MS.gene050442 | MS.gene42125 | 0.842905 | 1.94E-58 | -1.69E-46 |
| MS.gene050605 | MS.gene42125 | 0.832062 | 1.17E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene42125 | -0.822933 | 1.82E-53 | -1.69E-46 |
| MS.gene050654 | MS.gene42125 | 0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene42125 | 0.828299 | 9.71E-55 | -1.69E-46 |
| MS.gene050815 | MS.gene42125 | 0.817549 | 3.11E-52 | -1.69E-46 |
| MS.gene050953 | MS.gene42125 | 0.806162 | 9.40E-50 | -1.69E-46 |
| MS.gene050962 | MS.gene42125 | 0.81441 | 1.56E-51 | -1.69E-46 |
| MS.gene051066 | MS.gene42125 | 0.8053 | 1.43E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene42125 | 0.862242 | 5.82E-64 | -1.69E-46 |
| MS.gene051243 | MS.gene42125 | 0.821399 | 4.12E-53 | -1.69E-46 |
| MS.gene051328 | MS.gene42125 | 0.817226 | 3.68E-52 | -1.69E-46 |
| MS.gene051368 | MS.gene42125 | 0.82158 | 3.74E-53 | -1.69E-46 |
| MS.gene051452 | MS.gene42125 | 0.807757 | 4.32E-50 | -1.69E-46 |
| MS.gene051800 | MS.gene42125 | 0.802218 | 6.23E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene42125 | 0.824091 | 9.74E-54 | -1.69E-46 |
| MS.gene05215 | MS.gene42125 | 0.802951 | 4.40E-49 | -1.69E-46 |
| MS.gene052426 | MS.gene42125 | 0.809744 | 1.63E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene42125 | 0.801426 | 9.05E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene42125 | 0.80024 | 1.58E-48 | -1.69E-46 |
| MS.gene052863 | MS.gene42125 | 0.823437 | 1.39E-53 | -1.69E-46 |
| MS.gene05288 | MS.gene42125 | 0.818694 | 1.72E-52 | -1.69E-46 |
| MS.gene05289 | MS.gene42125 | 0.823828 | 1.12E-53 | -1.69E-46 |
| MS.gene053008 | MS.gene42125 | 0.864408 | 1.24E-64 | -1.69E-46 |
| MS.gene053216 | MS.gene42125 | 0.803242 | 3.83E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene42125 | 0.831975 | 1.23E-55 | -1.69E-46 |
| MS.gene053931 | MS.gene42125 | 0.808604 | 2.85E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene42125 | 0.803253 | 3.81E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene42125 | 0.821188 | 4.61E-53 | -1.69E-46 |
| MS.gene054405 | MS.gene42125 | 0.800956 | 1.13E-48 | -1.69E-46 |
| MS.gene054472 | MS.gene42125 | 0.80593 | 1.05E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene42125 | 0.800469 | 1.42E-48 | -1.69E-46 |
| MS.gene054657 | MS.gene42125 | 0.826889 | 2.12E-54 | -1.69E-46 |
| MS.gene054658 | MS.gene42125 | 0.825964 | 3.52E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene42125 | 0.818465 | 1.93E-52 | -1.69E-46 |
| MS.gene05510 | MS.gene42125 | 0.845634 | 3.59E-59 | -1.69E-46 |
| MS.gene05517 | MS.gene42125 | 0.84009 | 1.07E-57 | -1.69E-46 |
| MS.gene055222 | MS.gene42125 | 0.816872 | 4.42E-52 | -1.69E-46 |
| MS.gene055608 | MS.gene42125 | 0.818172 | 2.25E-52 | -1.69E-46 |
| MS.gene055623 | MS.gene42125 | 0.836543 | 8.80E-57 | -1.69E-46 |
| MS.gene055701 | MS.gene42125 | 0.813679 | 2.27E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene42125 | 0.816883 | 4.39E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene42125 | 0.828419 | 9.09E-55 | -1.69E-46 |
| MS.gene056173 | MS.gene42125 | 0.800924 | 1.15E-48 | -1.69E-46 |
| MS.gene056174 | MS.gene42125 | 0.811384 | 7.19E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene42125 | 0.809792 | 1.59E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene42125 | 0.810535 | 1.10E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene42125 | 0.818504 | 1.89E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene42125 | 0.804309 | 2.30E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene42125 | 0.842015 | 3.35E-58 | -1.69E-46 |
| MS.gene057869 | MS.gene42125 | 0.833072 | 6.58E-56 | -1.69E-46 |
| MS.gene057915 | MS.gene42125 | 0.823934 | 1.06E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene42125 | 0.809323 | 2.00E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene42125 | 0.817586 | 3.05E-52 | -1.69E-46 |
| MS.gene058146 | MS.gene42125 | 0.836634 | 8.34E-57 | -1.69E-46 |
| MS.gene058548 | MS.gene42125 | 0.848412 | 6.23E-60 | -1.69E-46 |
| MS.gene058549 | MS.gene42125 | 0.833798 | 4.34E-56 | -1.69E-46 |
| MS.gene058595 | MS.gene42125 | 0.82646 | 2.68E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene42125 | 0.807797 | 4.24E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene42125 | 0.820185 | 7.84E-53 | -1.69E-46 |
| MS.gene059161 | MS.gene42125 | 0.808255 | 3.39E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene42125 | 0.800778 | 1.23E-48 | -1.69E-46 |
| MS.gene059725 | MS.gene42125 | 0.804199 | 2.42E-49 | -1.69E-46 |
| MS.gene05979 | MS.gene42125 | 0.851349 | 9.40E-61 | -1.69E-46 |
| MS.gene059842 | MS.gene42125 | 0.874931 | 4.59E-68 | -1.69E-46 |
| MS.gene060011 | MS.gene42125 | 0.814836 | 1.26E-51 | -1.69E-46 |
| MS.gene060296 | MS.gene42125 | 0.819604 | 1.06E-52 | -1.69E-46 |
| MS.gene060310 | MS.gene42125 | 0.849608 | 2.90E-60 | -1.69E-46 |
| MS.gene060322 | MS.gene42125 | 0.83286 | 7.43E-56 | -1.69E-46 |
| MS.gene060429 | MS.gene42125 | 0.827509 | 1.50E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene42125 | 0.802544 | 5.33E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene42125 | 0.834284 | 3.28E-56 | -1.69E-46 |
| MS.gene060685 | MS.gene42125 | 0.834199 | 3.44E-56 | -1.69E-46 |
| MS.gene060802 | MS.gene42125 | 0.865643 | 5.09E-65 | -1.69E-46 |
| MS.gene060803 | MS.gene42125 | 0.874551 | 6.18E-68 | -1.69E-46 |
| MS.gene060998 | MS.gene42125 | 0.823573 | 1.29E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42125.t1 | MTR_6g004810 | 85.217 | 115 | 10 | 1 | 5 | 112 | 202 | 316 | 1.35e-31 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 71 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGTGCATTTGCCTTCTT+TGG | 0.267077 | 7.3:-33269368 | None:intergenic |
| GGTAGGTCTGGCAGTGCTTA+TGG | 0.308374 | 7.3:+33269479 | MS.gene42125:CDS |
| GCTAGTGGAGCTTCCTTCTA+TGG | 0.310496 | 7.3:+33269788 | MS.gene42125:CDS |
| GCTGGTCAATATCATCCTTA+TGG | 0.340155 | 7.3:+33269833 | MS.gene42125:CDS |
| GATGGATTTGGTGGCGGATT+TGG | 0.341068 | 7.3:+33269458 | MS.gene42125:CDS |
| GCCAGCCTTGGCGTTGGATA+TGG | 0.345581 | 7.3:+33269758 | MS.gene42125:CDS |
| TCCACCTCTGCTTCCATAGA+AGG | 0.351882 | 7.3:-33269801 | None:intergenic |
| GGTGGATATGCTGGAGCAAT+GGG | 0.361158 | 7.3:+33269551 | MS.gene42125:CDS |
| GGAGATGCTTATGATGGATT+TGG | 0.368480 | 7.3:+33269446 | MS.gene42125:CDS |
| CTGGCAGTGCTTATGGTGGT+AGG | 0.388131 | 7.3:+33269486 | MS.gene42125:CDS |
| TATGGAAGCAGAGGTGGATA+TGG | 0.395763 | 7.3:+33269806 | MS.gene42125:CDS |
| GGCTATGGAAGTGAGTTTGC+TGG | 0.412667 | 7.3:+33269524 | MS.gene42125:CDS |
| AGGCAACAAACTCTTGCAAA+TGG | 0.425471 | 7.3:-33269105 | None:intergenic |
| CTAGCATATGCAGGTCGTTA+TGG | 0.428760 | 7.3:+33269599 | MS.gene42125:CDS |
| GGCAACAAACTCTTGCAAAT+GGG | 0.429927 | 7.3:-33269104 | None:intergenic |
| CCTAGTGGGTATGGCGGACT+TGG | 0.432034 | 7.3:+33269647 | MS.gene42125:CDS |
| GCTGGGTATGGTGGATATGC+TGG | 0.433435 | 7.3:+33269542 | MS.gene42125:CDS |
| CTTTGAGTCATTGTAGCGCT+TGG | 0.451111 | 7.3:-33269399 | None:intergenic |
| GGAAGTGAGTTTGCTGGGTA+TGG | 0.452480 | 7.3:+33269530 | MS.gene42125:CDS |
| TCCATATCCAACGCCAAGGC+TGG | 0.457806 | 7.3:-33269759 | None:intergenic |
| TGGCAGTGCTTATGGTGGTA+GGG | 0.459037 | 7.3:+33269487 | MS.gene42125:CDS |
| TGGTGGATATGCTGGAGCAA+TGG | 0.461072 | 7.3:+33269550 | MS.gene42125:CDS |
| TCATACATCAGTGGTGGGTA+TGG | 0.467506 | 7.3:+33269425 | MS.gene42125:CDS |
| GGTGGCGGATTTGGTAGGTC+TGG | 0.474553 | 7.3:+33269467 | MS.gene42125:CDS |
| ATATCATCCTTATGGAAGAT+AGG | 0.474716 | 7.3:+33269841 | MS.gene42125:CDS |
| GGCTATGATCCTAGTGGGTA+TGG | 0.490193 | 7.3:+33269638 | MS.gene42125:CDS |
| CAAGAAGGCTGAACCAAAGA+AGG | 0.494018 | 7.3:+33269355 | MS.gene42125:CDS |
| GGTGGTCCGTATGGTGGCTA+TGG | 0.495116 | 7.3:+33269509 | MS.gene42125:CDS |
| GGCAGTGCTTATGGTGGTAG+GGG | 0.498411 | 7.3:+33269488 | MS.gene42125:CDS |
| GGTGGTAGGGGTGGTCCGTA+TGG | 0.504580 | 7.3:+33269500 | MS.gene42125:CDS |
| ATAACTGCCTATCTTCCATA+AGG | 0.509101 | 7.3:-33269848 | None:intergenic |
| AGTGCTTATGGTGGTAGGGG+TGG | 0.514243 | 7.3:+33269491 | MS.gene42125:CDS |
| TCCTTCTATGGAAGCAGAGG+TGG | 0.516993 | 7.3:+33269800 | MS.gene42125:CDS |
| AGTGAGTTTGCTGGGTATGG+TGG | 0.521591 | 7.3:+33269533 | MS.gene42125:CDS |
| TTTGTAGGTGGAAATCAAGA+AGG | 0.536506 | 7.3:+33269340 | MS.gene42125:intron |
| AGTGGCTATGATGCCAGCCT+TGG | 0.544416 | 7.3:+33269746 | MS.gene42125:intron |
| GATTTGGTGGCGGATTTGGT+AGG | 0.544659 | 7.3:+33269462 | MS.gene42125:CDS |
| AGAGGTGGATATGGTGGTGC+TGG | 0.552625 | 7.3:+33269815 | MS.gene42125:CDS |
| TCATTGTAGCGCTTGGATGA+TGG | 0.553767 | 7.3:-33269392 | None:intergenic |
| AGCCTTGGCGTTGGATATGG+AGG | 0.558812 | 7.3:+33269761 | MS.gene42125:CDS |
| GATCCTTCTCTAGCATATGC+AGG | 0.559447 | 7.3:+33269590 | MS.gene42125:CDS |
| GCTATGGAAGTGAGTTTGCT+GGG | 0.562673 | 7.3:+33269525 | MS.gene42125:CDS |
| CGACCTGCATATGCTAGAGA+AGG | 0.563559 | 7.3:-33269593 | None:intergenic |
| GCAACAAACTCTTGCAAATG+GGG | 0.563782 | 7.3:-33269103 | None:intergenic |
| TAGAGAAGGATCTCCTCTGT+AGG | 0.567608 | 7.3:-33269579 | None:intergenic |
| GGTAGGGGTGGTCCGTATGG+TGG | 0.570641 | 7.3:+33269503 | MS.gene42125:CDS |
| TGGATATGCTGGAGCAATGG+GGG | 0.572776 | 7.3:+33269553 | MS.gene42125:CDS |
| GATGCTTATGATGGATTTGG+TGG | 0.573529 | 7.3:+33269449 | MS.gene42125:CDS |
| CCAAGTCCGCCATACCCACT+AGG | 0.573852 | 7.3:-33269647 | None:intergenic |
| GGGTATGGAGATGCTTATGA+TGG | 0.574308 | 7.3:+33269440 | MS.gene42125:CDS |
| AGAGAAGGATCTCCTCTGTA+GGG | 0.575562 | 7.3:-33269578 | None:intergenic |
| AAGTCTTCATACATCAGTGG+TGG | 0.577289 | 7.3:+33269419 | MS.gene42125:CDS |
| GCTTATGATGGATTTGGTGG+CGG | 0.594491 | 7.3:+33269452 | MS.gene42125:CDS |
| GCATATGCAGGTCGTTATGG+TGG | 0.601840 | 7.3:+33269602 | MS.gene42125:CDS |
| GGATATGCTGGAGCAATGGG+GGG | 0.602473 | 7.3:+33269554 | MS.gene42125:CDS |
| TCACTTCCATAGCCACCATA+CGG | 0.613738 | 7.3:-33269515 | None:intergenic |
| TATGATGCCAGCCTTGGCGT+TGG | 0.617671 | 7.3:+33269752 | MS.gene42125:CDS |
| TAGCGCTTGGATGATGGAGG+TGG | 0.622852 | 7.3:-33269386 | None:intergenic |
| GCAGAGGCTATGATCCTAGT+GGG | 0.624317 | 7.3:+33269633 | MS.gene42125:CDS |
| AGTCTTCATACATCAGTGGT+GGG | 0.625749 | 7.3:+33269420 | MS.gene42125:CDS |
| GGATATGGAGGAGCTGCTAG+TGG | 0.626427 | 7.3:+33269773 | MS.gene42125:CDS |
| GCTTCCTTCTATGGAAGCAG+AGG | 0.626636 | 7.3:+33269797 | MS.gene42125:CDS |
| CTCCTCCATATCCAACGCCA+AGG | 0.636818 | 7.3:-33269763 | None:intergenic |
| AGCAGAGGCTATGATCCTAG+TGG | 0.638315 | 7.3:+33269632 | MS.gene42125:CDS |
| GTGGATATGCTGGAGCAATG+GGG | 0.652433 | 7.3:+33269552 | MS.gene42125:CDS |
| TCAAAGTCTTCATACATCAG+TGG | 0.669588 | 7.3:+33269416 | MS.gene42125:CDS |
| GGAAGCAGAGGTGGATATGG+TGG | 0.673211 | 7.3:+33269809 | MS.gene42125:CDS |
| AGGTCTGGCAGTGCTTATGG+TGG | 0.677321 | 7.3:+33269482 | MS.gene42125:CDS |
| TATGGTGGAAGCTTTAGCAG+AGG | 0.678683 | 7.3:+33269617 | MS.gene42125:CDS |
| TTGTAGCGCTTGGATGATGG+AGG | 0.684955 | 7.3:-33269389 | None:intergenic |
| TATGATCCTAGTGGGTATGG+CGG | 0.710234 | 7.3:+33269641 | MS.gene42125:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGTAAAGAAAAAATGA+TGG | - | chr7.3:33269244-33269263 | None:intergenic | 15.0% |
| !! | AATAAAACAAAACAAAAATC+TGG | - | chr7.3:33269270-33269289 | None:intergenic | 15.0% |
| !! | ATAAAACAAAACAAAAATCT+GGG | - | chr7.3:33269269-33269288 | None:intergenic | 15.0% |
| !! | ATTGAATAATGTATTAATGA+AGG | - | chr7.3:33269128-33269147 | None:intergenic | 15.0% |
| !! | TAAAAAATGATTGTAACTCA+AGG | - | chr7.3:33269207-33269226 | None:intergenic | 20.0% |
| !! | TTCAATTTATCATGTAAATC+TGG | + | chr7.3:33269142-33269161 | MS.gene42125:intron | 20.0% |
| ! | AATTTATCATGTAAATCTGG+AGG | + | chr7.3:33269145-33269164 | MS.gene42125:intron | 25.0% |
| ! | TCTTAAATTCAAGTGTTTAC+TGG | + | chr7.3:33269175-33269194 | MS.gene42125:intron | 25.0% |
| !! | CTTTGTTATCTTTACTTTGT+AGG | + | chr7.3:33269325-33269344 | MS.gene42125:intron | 25.0% |
| ATATCATCCTTATGGAAGAT+AGG | + | chr7.3:33269841-33269860 | MS.gene42125:CDS | 30.0% | |
| TGTTATCTTTACTTTGTAGG+TGG | + | chr7.3:33269328-33269347 | MS.gene42125:intron | 30.0% | |
| ATAACTGCCTATCTTCCATA+AGG | - | chr7.3:33269851-33269870 | None:intergenic | 35.0% | |
| TCAAAGTCTTCATACATCAG+TGG | + | chr7.3:33269416-33269435 | MS.gene42125:CDS | 35.0% | |
| TTTGTAGGTGGAAATCAAGA+AGG | + | chr7.3:33269340-33269359 | MS.gene42125:intron | 35.0% | |
| AAGTCTTCATACATCAGTGG+TGG | + | chr7.3:33269419-33269438 | MS.gene42125:CDS | 40.0% | |
| AGGCAACAAACTCTTGCAAA+TGG | - | chr7.3:33269108-33269127 | None:intergenic | 40.0% | |
| AGTCTTCATACATCAGTGGT+GGG | + | chr7.3:33269420-33269439 | MS.gene42125:CDS | 40.0% | |
| GCAACAAACTCTTGCAAATG+GGG | - | chr7.3:33269106-33269125 | None:intergenic | 40.0% | |
| GCTGGTCAATATCATCCTTA+TGG | + | chr7.3:33269833-33269852 | MS.gene42125:CDS | 40.0% | |
| GGCAACAAACTCTTGCAAAT+GGG | - | chr7.3:33269107-33269126 | None:intergenic | 40.0% | |
| !! | GATGCTTATGATGGATTTGG+TGG | + | chr7.3:33269449-33269468 | MS.gene42125:CDS | 40.0% |
| !! | GGAGATGCTTATGATGGATT+TGG | + | chr7.3:33269446-33269465 | MS.gene42125:CDS | 40.0% |
| AGAGAAGGATCTCCTCTGTA+GGG | - | chr7.3:33269581-33269600 | None:intergenic | 45.0% | |
| CAAGAAGGCTGAACCAAAGA+AGG | + | chr7.3:33269355-33269374 | MS.gene42125:CDS | 45.0% | |
| CTAGCATATGCAGGTCGTTA+TGG | + | chr7.3:33269599-33269618 | MS.gene42125:CDS | 45.0% | |
| CTTTGAGTCATTGTAGCGCT+TGG | - | chr7.3:33269402-33269421 | None:intergenic | 45.0% | |
| GATCCTTCTCTAGCATATGC+AGG | + | chr7.3:33269590-33269609 | MS.gene42125:CDS | 45.0% | |
| GGGTATGGAGATGCTTATGA+TGG | + | chr7.3:33269440-33269459 | MS.gene42125:CDS | 45.0% | |
| TAGAGAAGGATCTCCTCTGT+AGG | - | chr7.3:33269582-33269601 | None:intergenic | 45.0% | |
| TATGGAAGCAGAGGTGGATA+TGG | + | chr7.3:33269806-33269825 | MS.gene42125:CDS | 45.0% | |
| TCACTTCCATAGCCACCATA+CGG | - | chr7.3:33269518-33269537 | None:intergenic | 45.0% | |
| TCATTGTAGCGCTTGGATGA+TGG | - | chr7.3:33269395-33269414 | None:intergenic | 45.0% | |
| ! | GCTATGGAAGTGAGTTTGCT+GGG | + | chr7.3:33269525-33269544 | MS.gene42125:CDS | 45.0% |
| ! | TATGATCCTAGTGGGTATGG+CGG | + | chr7.3:33269641-33269660 | MS.gene42125:CDS | 45.0% |
| ! | TATGGTGGAAGCTTTAGCAG+AGG | + | chr7.3:33269617-33269636 | MS.gene42125:CDS | 45.0% |
| !! | GCTTATGATGGATTTGGTGG+CGG | + | chr7.3:33269452-33269471 | MS.gene42125:CDS | 45.0% |
| !! | TCATACATCAGTGGTGGGTA+TGG | + | chr7.3:33269425-33269444 | MS.gene42125:CDS | 45.0% |
| AGCAGAGGCTATGATCCTAG+TGG | + | chr7.3:33269632-33269651 | MS.gene42125:CDS | 50.0% | |
| CGACCTGCATATGCTAGAGA+AGG | - | chr7.3:33269596-33269615 | None:intergenic | 50.0% | |
| GCAGAGGCTATGATCCTAGT+GGG | + | chr7.3:33269633-33269652 | MS.gene42125:CDS | 50.0% | |
| GCATATGCAGGTCGTTATGG+TGG | + | chr7.3:33269602-33269621 | MS.gene42125:CDS | 50.0% | |
| GCTAGTGGAGCTTCCTTCTA+TGG | + | chr7.3:33269788-33269807 | MS.gene42125:CDS | 50.0% | |
| GCTTCCTTCTATGGAAGCAG+AGG | + | chr7.3:33269797-33269816 | MS.gene42125:CDS | 50.0% | |
| GGCTATGGAAGTGAGTTTGC+TGG | + | chr7.3:33269524-33269543 | MS.gene42125:CDS | 50.0% | |
| GGTGGATATGCTGGAGCAAT+GGG | + | chr7.3:33269551-33269570 | MS.gene42125:CDS | 50.0% | |
| GGTGGTGCATTTGCCTTCTT+TGG | - | chr7.3:33269371-33269390 | None:intergenic | 50.0% | |
| GTGGATATGCTGGAGCAATG+GGG | + | chr7.3:33269552-33269571 | MS.gene42125:CDS | 50.0% | |
| TCCACCTCTGCTTCCATAGA+AGG | - | chr7.3:33269804-33269823 | None:intergenic | 50.0% | |
| TCCTTCTATGGAAGCAGAGG+TGG | + | chr7.3:33269800-33269819 | MS.gene42125:CDS | 50.0% | |
| TGGATATGCTGGAGCAATGG+GGG | + | chr7.3:33269553-33269572 | MS.gene42125:CDS | 50.0% | |
| TGGCAGTGCTTATGGTGGTA+GGG | + | chr7.3:33269487-33269506 | MS.gene42125:CDS | 50.0% | |
| ! | GAGAGTTATGGGGCATTTGG+TGG | + | chr7.3:33269671-33269690 | MS.gene42125:intron | 50.0% |
| ! | GGCTATGATCCTAGTGGGTA+TGG | + | chr7.3:33269638-33269657 | MS.gene42125:CDS | 50.0% |
| ! | GGTGAGAGTTATGGGGCATT+TGG | + | chr7.3:33269668-33269687 | MS.gene42125:intron | 50.0% |
| ! | TGGTGGATATGCTGGAGCAA+TGG | + | chr7.3:33269550-33269569 | MS.gene42125:CDS | 50.0% |
| ! | TTGTAGCGCTTGGATGATGG+AGG | - | chr7.3:33269392-33269411 | None:intergenic | 50.0% |
| !! | AGTGAGTTTGCTGGGTATGG+TGG | + | chr7.3:33269533-33269552 | MS.gene42125:CDS | 50.0% |
| !! | CGGACTTGGTGAGAGTTATG+GGG | + | chr7.3:33269661-33269680 | MS.gene42125:intron | 50.0% |
| !! | GATGGATTTGGTGGCGGATT+TGG | + | chr7.3:33269458-33269477 | MS.gene42125:CDS | 50.0% |
| !! | GATTTGGTGGCGGATTTGGT+AGG | + | chr7.3:33269462-33269481 | MS.gene42125:CDS | 50.0% |
| !! | GCGGACTTGGTGAGAGTTAT+GGG | + | chr7.3:33269660-33269679 | MS.gene42125:intron | 50.0% |
| !! | GGAAGTGAGTTTGCTGGGTA+TGG | + | chr7.3:33269530-33269549 | MS.gene42125:CDS | 50.0% |
| !! | GGTGCTGGTGCATATCAAAG+TGG | + | chr7.3:33269728-33269747 | MS.gene42125:intron | 50.0% |
| AGGTCTGGCAGTGCTTATGG+TGG | + | chr7.3:33269482-33269501 | MS.gene42125:CDS | 55.0% | |
| AGTGCTTATGGTGGTAGGGG+TGG | + | chr7.3:33269491-33269510 | MS.gene42125:CDS | 55.0% | |
| AGTGGCTATGATGCCAGCCT+TGG | + | chr7.3:33269746-33269765 | MS.gene42125:intron | 55.0% | |
| CTCCTCCATATCCAACGCCA+AGG | - | chr7.3:33269766-33269785 | None:intergenic | 55.0% | |
| CTGGCAGTGCTTATGGTGGT+AGG | + | chr7.3:33269486-33269505 | MS.gene42125:CDS | 55.0% | |
| GGAAGCAGAGGTGGATATGG+TGG | + | chr7.3:33269809-33269828 | MS.gene42125:CDS | 55.0% | |
| GGATATGCTGGAGCAATGGG+GGG | + | chr7.3:33269554-33269573 | MS.gene42125:CDS | 55.0% | |
| GGATATGGAGGAGCTGCTAG+TGG | + | chr7.3:33269773-33269792 | MS.gene42125:CDS | 55.0% | |
| GGCAGTGCTTATGGTGGTAG+GGG | + | chr7.3:33269488-33269507 | MS.gene42125:CDS | 55.0% | |
| GGTAGGTCTGGCAGTGCTTA+TGG | + | chr7.3:33269479-33269498 | MS.gene42125:CDS | 55.0% | |
| TATGATGCCAGCCTTGGCGT+TGG | + | chr7.3:33269752-33269771 | MS.gene42125:CDS | 55.0% | |
| TCCATATCCAACGCCAAGGC+TGG | - | chr7.3:33269762-33269781 | None:intergenic | 55.0% | |
| ! | AGAGGTGGATATGGTGGTGC+TGG | + | chr7.3:33269815-33269834 | MS.gene42125:CDS | 55.0% |
| ! | AGCCTTGGCGTTGGATATGG+AGG | + | chr7.3:33269761-33269780 | MS.gene42125:CDS | 55.0% |
| !! | GCTGGGTATGGTGGATATGC+TGG | + | chr7.3:33269542-33269561 | MS.gene42125:CDS | 55.0% |
| !! | GGCGGACTTGGTGAGAGTTA+TGG | + | chr7.3:33269659-33269678 | MS.gene42125:intron | 55.0% |
| !! | TAGCGCTTGGATGATGGAGG+TGG | - | chr7.3:33269389-33269408 | None:intergenic | 55.0% |
| !! | TATGGGGCATTTGGTGGTGC+AGG | + | chr7.3:33269677-33269696 | MS.gene42125:intron | 55.0% |
| AGAAGAACCACCTCCGCCAG+CGG | - | chr7.3:33269708-33269727 | None:intergenic | 60.0% | |
| CCAAGTCCGCCATACCCACT+AGG | - | chr7.3:33269650-33269669 | None:intergenic | 60.0% | |
| GGAGGTGGTTCTTCTGGTGC+TGG | + | chr7.3:33269713-33269732 | MS.gene42125:intron | 60.0% | |
| GGTGGTCCGTATGGTGGCTA+TGG | + | chr7.3:33269509-33269528 | MS.gene42125:CDS | 60.0% | |
| ! | GCCAGCCTTGGCGTTGGATA+TGG | + | chr7.3:33269758-33269777 | MS.gene42125:CDS | 60.0% |
| !! | CCTAGTGGGTATGGCGGACT+TGG | + | chr7.3:33269647-33269666 | MS.gene42125:CDS | 60.0% |
| !! | GGTGGCGGATTTGGTAGGTC+TGG | + | chr7.3:33269467-33269486 | MS.gene42125:CDS | 60.0% |
| GCAATGGGGGGACCCTACAG+AGG | + | chr7.3:33269566-33269585 | MS.gene42125:CDS | 65.0% | |
| GCTGGCGGAGGTGGTTCTTC+TGG | + | chr7.3:33269707-33269726 | MS.gene42125:intron | 65.0% | |
| GGTAGGGGTGGTCCGTATGG+TGG | + | chr7.3:33269503-33269522 | MS.gene42125:CDS | 65.0% | |
| GGTGGTAGGGGTGGTCCGTA+TGG | + | chr7.3:33269500-33269519 | MS.gene42125:CDS | 65.0% | |
| ! | GGTGCAGGTGCTGCCGCTGG+CGG | + | chr7.3:33269692-33269711 | MS.gene42125:intron | 75.0% |
| ! | GGTGGTGCAGGTGCTGCCGC+TGG | + | chr7.3:33269689-33269708 | MS.gene42125:intron | 75.0% |
| !! | GCAGGTGCTGCCGCTGGCGG+AGG | + | chr7.3:33269695-33269714 | MS.gene42125:intron | 80.0% |
| !! | GGTGCTGCCGCTGGCGGAGG+TGG | + | chr7.3:33269698-33269717 | MS.gene42125:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 33269099 | 33269875 | 33269099 | ID=MS.gene42125 |
| chr7.3 | mRNA | 33269099 | 33269875 | 33269099 | ID=MS.gene42125.t1;Parent=MS.gene42125 |
| chr7.3 | exon | 33269099 | 33269116 | 33269099 | ID=MS.gene42125.t1.exon1;Parent=MS.gene42125.t1 |
| chr7.3 | CDS | 33269099 | 33269116 | 33269099 | ID=cds.MS.gene42125.t1;Parent=MS.gene42125.t1 |
| chr7.3 | exon | 33269347 | 33269668 | 33269347 | ID=MS.gene42125.t1.exon2;Parent=MS.gene42125.t1 |
| chr7.3 | CDS | 33269347 | 33269668 | 33269347 | ID=cds.MS.gene42125.t1;Parent=MS.gene42125.t1 |
| chr7.3 | exon | 33269748 | 33269875 | 33269748 | ID=MS.gene42125.t1.exon3;Parent=MS.gene42125.t1 |
| chr7.3 | CDS | 33269748 | 33269875 | 33269748 | ID=cds.MS.gene42125.t1;Parent=MS.gene42125.t1 |
| Gene Sequence |
| Protein sequence |
