Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42307.t1 | XP_024633877.1 | 96 | 352 | 10 | 1 | 1 | 348 | 1 | 352 | 5.80E-185 | 656.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42307.t1 | P74038 | 45.6 | 270 | 147 | 0 | 66 | 335 | 4 | 273 | 9.1e-62 | 238.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42307.t1 | A0A072VDF7 | 96.0 | 352 | 10 | 1 | 1 | 348 | 1 | 352 | 4.2e-185 | 656.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene42307 | 0.854661 | 1.06E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene42307 | 0.814386 | 1.58E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene42307 | 0.844098 | 9.33E-59 | -1.69E-46 |
| MS.gene049232 | MS.gene42307 | 0.803792 | 2.94E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene42307 | 0.837323 | 5.56E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene42307 | 0.820002 | 8.63E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene42307 | 0.813541 | 2.43E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene42307 | 0.810981 | 8.79E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene42307 | 0.833029 | 6.74E-56 | -1.69E-46 |
| MS.gene050165 | MS.gene42307 | 0.848545 | 5.72E-60 | -1.69E-46 |
| MS.gene050170 | MS.gene42307 | 0.82094 | 5.26E-53 | -1.69E-46 |
| MS.gene050323 | MS.gene42307 | 0.82633 | 2.88E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene42307 | 0.807746 | 4.35E-50 | -1.69E-46 |
| MS.gene050338 | MS.gene42307 | -0.807964 | 3.91E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene42307 | 0.858688 | 6.94E-63 | -1.69E-46 |
| MS.gene050518 | MS.gene42307 | 0.824754 | 6.80E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene42307 | 0.846695 | 1.85E-59 | -1.69E-46 |
| MS.gene050612 | MS.gene42307 | 0.841885 | 3.62E-58 | -1.69E-46 |
| MS.gene05080 | MS.gene42307 | 0.800639 | 1.31E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene42307 | 0.840616 | 7.81E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene42307 | 0.837378 | 5.39E-57 | -1.69E-46 |
| MS.gene050876 | MS.gene42307 | 0.812484 | 4.14E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene42307 | 0.853591 | 2.16E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene42307 | 0.811248 | 7.70E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene42307 | 0.834573 | 2.77E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene42307 | 0.836463 | 9.22E-57 | -1.69E-46 |
| MS.gene052482 | MS.gene42307 | 0.829233 | 5.77E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene42307 | 0.83919 | 1.84E-57 | -1.69E-46 |
| MS.gene052822 | MS.gene42307 | 0.804275 | 2.34E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene42307 | 0.814277 | 1.67E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene42307 | 0.81711 | 3.91E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene42307 | 0.800239 | 1.58E-48 | -1.69E-46 |
| MS.gene053824 | MS.gene42307 | 0.818692 | 1.72E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene42307 | 0.800484 | 1.41E-48 | -1.69E-46 |
| MS.gene054642 | MS.gene42307 | 0.812124 | 4.96E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene42307 | -0.8027 | 4.95E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene42307 | 0.863258 | 2.83E-64 | -1.69E-46 |
| MS.gene054954 | MS.gene42307 | 0.840584 | 7.96E-58 | -1.69E-46 |
| MS.gene055362 | MS.gene42307 | 0.817843 | 2.67E-52 | -1.69E-46 |
| MS.gene055502 | MS.gene42307 | 0.856759 | 2.59E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene42307 | 0.852106 | 5.74E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene42307 | 0.852897 | 3.41E-61 | -1.69E-46 |
| MS.gene055750 | MS.gene42307 | 0.811491 | 6.82E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene42307 | 0.851865 | 6.72E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene42307 | 0.854929 | 8.87E-62 | -1.69E-46 |
| MS.gene056504 | MS.gene42307 | 0.852514 | 4.39E-61 | -1.69E-46 |
| MS.gene056510 | MS.gene42307 | 0.81291 | 3.34E-51 | -1.69E-46 |
| MS.gene056549 | MS.gene42307 | 0.801721 | 7.88E-49 | -1.69E-46 |
| MS.gene056550 | MS.gene42307 | -0.807413 | 5.12E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene42307 | 0.814347 | 1.61E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene42307 | 0.853259 | 2.69E-61 | -1.69E-46 |
| MS.gene056694 | MS.gene42307 | -0.800067 | 1.71E-48 | -1.69E-46 |
| MS.gene056898 | MS.gene42307 | 0.82339 | 1.42E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene42307 | 0.813747 | 2.19E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene42307 | 0.800015 | 1.76E-48 | -1.69E-46 |
| MS.gene058334 | MS.gene42307 | -0.823433 | 1.39E-53 | -1.69E-46 |
| MS.gene058335 | MS.gene42307 | 0.837509 | 4.98E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene42307 | 0.826346 | 2.85E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene42307 | 0.844656 | 6.60E-59 | -1.69E-46 |
| MS.gene058544 | MS.gene42307 | 0.816222 | 6.18E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene42307 | 0.82307 | 1.69E-53 | -1.69E-46 |
| MS.gene058838 | MS.gene42307 | 0.820264 | 7.52E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene42307 | 0.838865 | 2.23E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene42307 | 0.845219 | 4.65E-59 | -1.69E-46 |
| MS.gene059079 | MS.gene42307 | 0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene05912 | MS.gene42307 | 0.817694 | 2.89E-52 | -1.69E-46 |
| MS.gene05914 | MS.gene42307 | 0.816804 | 4.58E-52 | -1.69E-46 |
| MS.gene059526 | MS.gene42307 | -0.802359 | 5.82E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene42307 | 0.843473 | 1.37E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene42307 | 0.819058 | 1.42E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene42307 | 0.832441 | 9.44E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene42307 | 0.833682 | 4.63E-56 | -1.69E-46 |
| MS.gene06000 | MS.gene42307 | 0.81112 | 8.21E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene42307 | 0.834637 | 2.67E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene42307 | 0.87628 | 1.58E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene42307 | 0.807568 | 4.74E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene42307 | 0.851341 | 9.45E-61 | -1.69E-46 |
| MS.gene060823 | MS.gene42307 | -0.830081 | 3.59E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene42307 | 0.856941 | 2.29E-62 | -1.69E-46 |
| MS.gene061044 | MS.gene42307 | -0.818733 | 1.68E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene42307 | 0.813477 | 2.51E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42307.t1 | MTR_3g112310 | 96.023 | 352 | 10 | 1 | 1 | 348 | 1 | 352 | 0.0 | 682 |
| MS.gene42307.t1 | MTR_3g112310 | 96.037 | 328 | 9 | 1 | 1 | 324 | 1 | 328 | 0.0 | 638 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42307.t1 | AT1G45110 | 72.260 | 292 | 81 | 0 | 55 | 346 | 46 | 337 | 3.82e-159 | 449 |
Find 87 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTGCGTTGCGGAAATT+TGG | 0.163996 | 3.2:+89585191 | MS.gene42307:CDS |
| ATTACAAGTTTATTATTATC+TGG | 0.272068 | 3.2:-89581774 | None:intergenic |
| CTAAGAGAATTAATTGAAAA+TGG | 0.305796 | 3.2:+89584254 | MS.gene42307:CDS |
| AGATGGAGTTCGGAGGATAA+AGG | 0.316784 | 3.2:-89581741 | None:intergenic |
| TGCATGCCCTTCAATCAATA+TGG | 0.318102 | 3.2:-89584186 | None:intergenic |
| ACGAATAGAAAATTCTTTGC+TGG | 0.338729 | 3.2:-89584144 | None:intergenic |
| CACTTGCGTTGCGGAAATTT+GGG | 0.343746 | 3.2:+89585192 | MS.gene42307:CDS |
| TCCACTGATGAATTTACATT+TGG | 0.349806 | 3.2:+89582607 | MS.gene42307:CDS |
| GGGGAAAAGGTAAGTTGCTT+TGG | 0.355232 | 3.2:-89581720 | None:intergenic |
| ACTCGGGATCAAGAAGAAAA+AGG | 0.373239 | 3.2:+89582741 | MS.gene42307:CDS |
| CACCATTGTTCAGGGCTCTC+CGG | 0.379351 | 3.2:+89582119 | MS.gene42307:intron |
| CTTCTTGATCCCGAGTGCTT+TGG | 0.381141 | 3.2:-89582734 | None:intergenic |
| AATCCCAGGTCCATGTGCTT+TGG | 0.393976 | 3.2:+89582558 | MS.gene42307:CDS |
| GATGGAGTTCGGAGGATAAA+GGG | 0.399268 | 3.2:-89581740 | None:intergenic |
| GGACCTGGGATTGGAACAAC+AGG | 0.427981 | 3.2:-89582547 | None:intergenic |
| GGCAGTGGAAAACGCCATCC+AGG | 0.443924 | 3.2:-89581661 | None:intergenic |
| ATCTTGAAGACATCACCTTC+AGG | 0.445097 | 3.2:+89581948 | MS.gene42307:CDS |
| CTTTCTCAGTTTCTTGAAGA+GGG | 0.449860 | 3.2:+89582821 | MS.gene42307:CDS |
| GGTATCGGCTCTTTCTGCCT+CGG | 0.453758 | 3.2:+89582579 | MS.gene42307:CDS |
| AGGTCCATGTGCTTTGGTAT+CGG | 0.460351 | 3.2:+89582564 | MS.gene42307:CDS |
| GTATCGGCTCTTTCTGCCTC+GGG | 0.462242 | 3.2:+89582580 | MS.gene42307:CDS |
| CGGAAGACACGAGGCACTCT+GGG | 0.466378 | 3.2:+89582170 | MS.gene42307:CDS |
| ACCATTGTTCAGGGCTCTCC+GGG | 0.474185 | 3.2:+89582120 | MS.gene42307:intron |
| AATATGGTAAGTTCTCCCTT+TGG | 0.477519 | 3.2:-89584170 | None:intergenic |
| CAGTGGAAGAGGTGCGGCAG+TGG | 0.480861 | 3.2:-89581676 | None:intergenic |
| AAAGCACATGGACCTGGGAT+TGG | 0.488329 | 3.2:-89582556 | None:intergenic |
| TCGGAAGACACGAGGCACTC+TGG | 0.490083 | 3.2:+89582169 | MS.gene42307:CDS |
| GAACTTACCATATTGATTGA+AGG | 0.490717 | 3.2:+89584179 | MS.gene42307:CDS |
| ATAAGTGACGCTGGAACGCC+TGG | 0.495165 | 3.2:+89582385 | MS.gene42307:CDS |
| AAAGGTAAGTTGCTTTGGAA+TGG | 0.495257 | 3.2:-89581715 | None:intergenic |
| AAAGAGGGAAAATGTTGCTT+CGG | 0.496095 | 3.2:+89581631 | None:intergenic |
| TTCGGAGGATAAAGGGGAAA+AGG | 0.500366 | 3.2:-89581733 | None:intergenic |
| GTTCCTGTTGTTCCAATCCC+AGG | 0.500390 | 3.2:+89582544 | MS.gene42307:CDS |
| CGCTCGCAGCATCTCAAACC+CGG | 0.501413 | 3.2:+89581896 | MS.gene42307:CDS |
| ACGCCTGGTATCAGTGATCC+TGG | 0.507533 | 3.2:+89582400 | MS.gene42307:CDS |
| AAGTTGCTTTGGAATGGAAA+AGG | 0.508393 | 3.2:-89581709 | None:intergenic |
| CATGGCTTCAGCAGAGCAAA+CGG | 0.510069 | 3.2:+89582766 | MS.gene42307:CDS |
| CTCCGCTGATGTTATACTAT+CGG | 0.517324 | 3.2:+89582150 | MS.gene42307:CDS |
| GAAGAAGAATACAGTGGAAG+AGG | 0.520210 | 3.2:-89581687 | None:intergenic |
| CAGTGATCCTGGTATGGAGT+TGG | 0.526144 | 3.2:+89582411 | MS.gene42307:CDS |
| CAAATTCAATGAATCACAAA+GGG | 0.528109 | 3.2:+89582315 | MS.gene42307:CDS |
| GATACCAAAGCACATGGACC+TGG | 0.530974 | 3.2:-89582562 | None:intergenic |
| GCTTTCTCAGTTTCTTGAAG+AGG | 0.533813 | 3.2:+89582820 | MS.gene42307:CDS |
| TGTTGCTTCGGCGATTACCC+TGG | 0.538601 | 3.2:+89581643 | MS.gene42307:CDS |
| TTCTCAAGCTCAATGTCCGA+TGG | 0.538928 | 3.2:-89584227 | None:intergenic |
| TTCTAAAGTTGAACCTCCAT+CGG | 0.541066 | 3.2:+89584211 | MS.gene42307:CDS |
| AAACCCGGTCTTTATCTCGT+TGG | 0.542040 | 3.2:+89581911 | MS.gene42307:CDS |
| AAAGGGAACAACTTGTGCTC+AGG | 0.542988 | 3.2:+89582332 | MS.gene42307:CDS |
| TGGTATCAGTGATCCTGGTA+TGG | 0.543755 | 3.2:+89582405 | MS.gene42307:CDS |
| ATACTTACCAACTCCATACC+AGG | 0.545915 | 3.2:-89582418 | None:intergenic |
| GATGTCTTCAAGATTTCCGA+TGG | 0.546308 | 3.2:-89581939 | None:intergenic |
| ATGGAGTTCGGAGGATAAAG+GGG | 0.547386 | 3.2:-89581739 | None:intergenic |
| AACTTACCATATTGATTGAA+GGG | 0.547874 | 3.2:+89584180 | MS.gene42307:CDS |
| GCTTCGGCGATTACCCTGGA+TGG | 0.551601 | 3.2:+89581647 | MS.gene42307:CDS |
| ATTTGGGAAGCAACTTGAAG+TGG | 0.553937 | 3.2:+89585208 | MS.gene42307:CDS |
| TGGGAAGCAACTTGAAGTGG+AGG | 0.557381 | 3.2:+89585211 | MS.gene42307:CDS |
| TGTTCCAACGAGATAAAGAC+CGG | 0.559367 | 3.2:-89581915 | None:intergenic |
| CTATATATTCACTTGCGTTG+CGG | 0.562841 | 3.2:+89585183 | MS.gene42307:CDS |
| TATCTCGTTGGAACACCCAT+CGG | 0.564506 | 3.2:+89581923 | MS.gene42307:CDS |
| TATCTGGATGTTGAGTGAGA+TGG | 0.568564 | 3.2:-89581758 | None:intergenic |
| ATGTTGAGTGAGATGGAGTT+CGG | 0.577685 | 3.2:-89581751 | None:intergenic |
| GGGAACAACTTGTGCTCAGG+AGG | 0.587717 | 3.2:+89582335 | MS.gene42307:CDS |
| ACAAATTCAATGAATCACAA+AGG | 0.598902 | 3.2:+89582314 | MS.gene42307:CDS |
| GAAAAGGAAGAAGAATACAG+TGG | 0.600108 | 3.2:-89581693 | None:intergenic |
| GCAGTGGAAAACGCCATCCA+GGG | 0.611925 | 3.2:-89581660 | None:intergenic |
| AACTGAGAAAGCTTGTGAGG+AGG | 0.612873 | 3.2:-89582809 | None:intergenic |
| AATGACAAAGTTTCACGAAG+AGG | 0.615304 | 3.2:+89583228 | MS.gene42307:CDS |
| AGAAACTGAGAAAGCTTGTG+AGG | 0.623622 | 3.2:-89582812 | None:intergenic |
| ACCAAATGTAAATTCATCAG+TGG | 0.627138 | 3.2:-89582608 | None:intergenic |
| GTGGCACTTATAAGTGACGC+TGG | 0.634936 | 3.2:+89582376 | MS.gene42307:CDS |
| ATGTCTTCAAGATTTCCGAT+GGG | 0.635435 | 3.2:-89581938 | None:intergenic |
| ATACCAAAGCACATGGACCT+GGG | 0.636160 | 3.2:-89582561 | None:intergenic |
| ATACCAGGATCACTGATACC+AGG | 0.638129 | 3.2:-89582403 | None:intergenic |
| TCAAGCTCAATGTCCGATGG+AGG | 0.640534 | 3.2:-89584224 | None:intergenic |
| TTCCGATAGTATAACATCAG+CGG | 0.642678 | 3.2:-89582152 | None:intergenic |
| GTTGAAACAAGGTGAGATTG+TGG | 0.644732 | 3.2:+89582357 | MS.gene42307:CDS |
| AGAATACAGTGGAAGAGGTG+CGG | 0.646714 | 3.2:-89581682 | None:intergenic |
| AAATGGCGAGAGTCTTTCCA+CGG | 0.651793 | 3.2:+89584271 | MS.gene42307:CDS |
| ATGCAGGCCAAATTATGTGT+TGG | 0.654583 | 3.2:+89582514 | MS.gene42307:intron |
| TTGAGTGAGATGGAGTTCGG+AGG | 0.659766 | 3.2:-89581748 | None:intergenic |
| ATTGGTAGCTGAAAGAACAT+CGG | 0.668003 | 3.2:+89585148 | MS.gene42307:CDS |
| GTGCTCAGGAGGTTGAAACA+AGG | 0.672276 | 3.2:+89582346 | MS.gene42307:CDS |
| TTCATCAGTGGATAAACCCG+AGG | 0.672572 | 3.2:-89582596 | None:intergenic |
| CATCAGCGGAGTTCAACACC+CGG | 0.673155 | 3.2:-89582138 | None:intergenic |
| AGAGCCGATACCAAAGCACA+TGG | 0.677490 | 3.2:-89582568 | None:intergenic |
| TTATACTATCGGAAGACACG+AGG | 0.685377 | 3.2:+89582161 | MS.gene42307:CDS |
| GTTCCAACGAGATAAAGACC+GGG | 0.703315 | 3.2:-89581914 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTAAAAATAATCAAATTA+TGG | + | chr3.2:89584341-89584360 | MS.gene42307:intron | 10.0% |
| !!! | ATTTAAGTTTATCATAATAA+TGG | - | chr3.2:89583960-89583979 | None:intergenic | 10.0% |
| !! | AATAATCAAATTATGGAATA+TGG | + | chr3.2:89584348-89584367 | MS.gene42307:intron | 15.0% |
| !! | ATTACAAGTTTATTATTATC+TGG | - | chr3.2:89581777-89581796 | None:intergenic | 15.0% |
| !!! | AAATTGATTTTTAATCAACT+TGG | + | chr3.2:89584665-89584684 | MS.gene42307:intron | 15.0% |
| !!! | TCATGAATTATTTTAATTGA+AGG | + | chr3.2:89583921-89583940 | MS.gene42307:intron | 15.0% |
| !!! | TTGATTAAAAATCAATTTTG+AGG | - | chr3.2:89584663-89584682 | None:intergenic | 15.0% |
| !! | ACTAGAAAAAATACATTGAT+GGG | - | chr3.2:89582704-89582723 | None:intergenic | 20.0% |
| !! | CAACTCAAAAATATAAAAGT+GGG | - | chr3.2:89582970-89582989 | None:intergenic | 20.0% |
| !! | CATAAGATGAATAAAATTCA+AGG | - | chr3.2:89583082-89583101 | None:intergenic | 20.0% |
| !! | CTAAGAGAATTAATTGAAAA+TGG | + | chr3.2:89584254-89584273 | MS.gene42307:CDS | 20.0% |
| !! | TAAAATTGAATGTGTCTATT+GGG | - | chr3.2:89584306-89584325 | None:intergenic | 20.0% |
| !! | TGACAAAAATTAAGATATGT+GGG | - | chr3.2:89584908-89584927 | None:intergenic | 20.0% |
| !! | TTGACAAAAATTAAGATATG+TGG | - | chr3.2:89584909-89584928 | None:intergenic | 20.0% |
| !! | TTGTTAAAATAAGAACAAAC+AGG | - | chr3.2:89584031-89584050 | None:intergenic | 20.0% |
| !!! | AAATTTGTTGAGAATGAAAA+TGG | - | chr3.2:89584601-89584620 | None:intergenic | 20.0% |
| !!! | ACATTTTTCATTATGCATTT+TGG | + | chr3.2:89581977-89581996 | MS.gene42307:intron | 20.0% |
| !!! | ATCAATGTATTTTTTCTAGT+CGG | + | chr3.2:89582704-89582723 | MS.gene42307:intron | 20.0% |
| !!! | CATGAAAAAGAAATTGTTTT+AGG | + | chr3.2:89583495-89583514 | MS.gene42307:intron | 20.0% |
| !!! | GTTAAAAGTAAAAAAGCATT+TGG | + | chr3.2:89584401-89584420 | MS.gene42307:intron | 20.0% |
| !!! | TAATCATTTTGAAGTGAATA+TGG | + | chr3.2:89584496-89584515 | MS.gene42307:intron | 20.0% |
| !!! | TTATTTGATATTAGCTTTCA+AGG | - | chr3.2:89584468-89584487 | None:intergenic | 20.0% |
| !!! | TTTGTTGAGAGTATTATAAA+GGG | + | chr3.2:89584819-89584838 | MS.gene42307:intron | 20.0% |
| !!! | TTTTGTTGAGAGTATTATAA+AGG | + | chr3.2:89584818-89584837 | MS.gene42307:intron | 20.0% |
| ! | AAGATGAATAAAATTCAAGG+TGG | - | chr3.2:89583079-89583098 | None:intergenic | 25.0% |
| ! | AATCGTTGAAAAAATTTAGC+AGG | - | chr3.2:89583522-89583541 | None:intergenic | 25.0% |
| ! | ACAAATTCAATGAATCACAA+AGG | + | chr3.2:89582314-89582333 | MS.gene42307:CDS | 25.0% |
| ! | AGATGAATAAAATTCAAGGT+GGG | - | chr3.2:89583078-89583097 | None:intergenic | 25.0% |
| ! | ATGAGTGATGTATATTCATT+GGG | - | chr3.2:89583905-89583924 | None:intergenic | 25.0% |
| ! | ATTACGATTAAGGAAAAGTT+TGG | - | chr3.2:89582874-89582893 | None:intergenic | 25.0% |
| ! | CAAATCAAACAAACAGTTTA+AGG | - | chr3.2:89583046-89583065 | None:intergenic | 25.0% |
| ! | CAAATTCAATGAATCACAAA+GGG | + | chr3.2:89582315-89582334 | MS.gene42307:CDS | 25.0% |
| ! | CATTTGGATTTCAACATATA+TGG | + | chr3.2:89584417-89584436 | MS.gene42307:intron | 25.0% |
| ! | CCAACTCAAAAATATAAAAG+TGG | - | chr3.2:89582971-89582990 | None:intergenic | 25.0% |
| ! | CTAAAATTGAATGTGTCTAT+TGG | - | chr3.2:89584307-89584326 | None:intergenic | 25.0% |
| ! | GACTAGAAAAAATACATTGA+TGG | - | chr3.2:89582705-89582724 | None:intergenic | 25.0% |
| ! | GCATATGAGTTAAAAAACTA+AGG | - | chr3.2:89583388-89583407 | None:intergenic | 25.0% |
| ! | TAAGGAATAAAAGAGAAAGT+TGG | - | chr3.2:89583730-89583749 | None:intergenic | 25.0% |
| ! | TCACAAAATTAGCAAATCAA+TGG | - | chr3.2:89582999-89583018 | None:intergenic | 25.0% |
| ! | TCTCTTGTTAATGTAATGTA+CGG | + | chr3.2:89583636-89583655 | MS.gene42307:intron | 25.0% |
| ! | TGAGAAAAACAATAACATGA+TGG | - | chr3.2:89583477-89583496 | None:intergenic | 25.0% |
| ! | TTAATTCATTCCATTAGTGT+TGG | - | chr3.2:89583410-89583429 | None:intergenic | 25.0% |
| !! | AACTTACCATATTGATTGAA+GGG | + | chr3.2:89584180-89584199 | MS.gene42307:CDS | 25.0% |
| !! | AATTTGCTTAAGCTTATCTT+AGG | + | chr3.2:89584689-89584708 | MS.gene42307:intron | 25.0% |
| !! | ATTGACTCATGCTTATTAAT+TGG | + | chr3.2:89585047-89585066 | MS.gene42307:intron | 25.0% |
| !! | ATTTTCACCAACACATAATT+TGG | - | chr3.2:89582524-89582543 | None:intergenic | 25.0% |
| !! | TCTCTTTTATTCCTTAACTA+CGG | + | chr3.2:89583734-89583753 | MS.gene42307:intron | 25.0% |
| !! | TGGAAATATTTTCATAGCAT+AGG | - | chr3.2:89584581-89584600 | None:intergenic | 25.0% |
| !!! | AACATAATCATTGCTTTTTG+CGG | - | chr3.2:89583859-89583878 | None:intergenic | 25.0% |
| !!! | AGTACTTTTAATTTAACCAG+TGG | + | chr3.2:89583352-89583371 | MS.gene42307:intron | 25.0% |
| !!! | ATGTTTTTAGGCTGTTAAAT+TGG | + | chr3.2:89585130-89585149 | MS.gene42307:intron | 25.0% |
| !!! | CCACTTTTATATTTTTGAGT+TGG | + | chr3.2:89582968-89582987 | MS.gene42307:intron | 25.0% |
| !!! | GTACTTTTAATTTAACCAGT+GGG | + | chr3.2:89583353-89583372 | MS.gene42307:intron | 25.0% |
| !!! | TGCTAATTATCTTATTTCTG+TGG | + | chr3.2:89583309-89583328 | MS.gene42307:intron | 25.0% |
| !!! | TTATTTTAACAACGTTCTCT+AGG | + | chr3.2:89584039-89584058 | MS.gene42307:intron | 25.0% |
| !!! | TTGATTTGTTTTCCATGATT+GGG | + | chr3.2:89583580-89583599 | MS.gene42307:intron | 25.0% |
| AAAAACTGAGTGAATGTTGA+GGG | - | chr3.2:89581834-89581853 | None:intergenic | 30.0% | |
| AATAAGAACAAACAGGTCAT+TGG | - | chr3.2:89584024-89584043 | None:intergenic | 30.0% | |
| AATGCATTTGGAAAAGACTT+CGG | - | chr3.2:89584877-89584896 | None:intergenic | 30.0% | |
| AATTAACTGACTGAACGATA+TGG | + | chr3.2:89582631-89582650 | MS.gene42307:intron | 30.0% | |
| AATTTAACCAGTGGGAATAA+AGG | + | chr3.2:89583361-89583380 | MS.gene42307:intron | 30.0% | |
| ACCAAATGTAAATTCATCAG+TGG | - | chr3.2:89582611-89582630 | None:intergenic | 30.0% | |
| ACCTAGAGATAAAATATGCT+AGG | - | chr3.2:89585025-89585044 | None:intergenic | 30.0% | |
| ACGAATAGAAAATTCTTTGC+TGG | - | chr3.2:89584147-89584166 | None:intergenic | 30.0% | |
| AGAACATAGTACTTATGTTC+AGG | - | chr3.2:89582911-89582930 | None:intergenic | 30.0% | |
| ATTAACTGACTGAACGATAT+GGG | + | chr3.2:89582632-89582651 | MS.gene42307:intron | 30.0% | |
| ATTAATTCCTGTCATAAGTG+TGG | + | chr3.2:89583978-89583997 | MS.gene42307:intron | 30.0% | |
| CAATAACATGATGGTAAAGA+AGG | - | chr3.2:89583468-89583487 | None:intergenic | 30.0% | |
| CATGAGTGATGTATATTCAT+TGG | - | chr3.2:89583906-89583925 | None:intergenic | 30.0% | |
| CTTCATTTGAATGATATTGC+AGG | + | chr3.2:89583185-89583204 | MS.gene42307:intron | 30.0% | |
| GAAAAATGTTTCATACCTGA+AGG | - | chr3.2:89581966-89581985 | None:intergenic | 30.0% | |
| GAAAAGTAAAGCCTAGAAAA+TGG | - | chr3.2:89581812-89581831 | None:intergenic | 30.0% | |
| TAAGCATGCAATTACGATTA+AGG | - | chr3.2:89582884-89582903 | None:intergenic | 30.0% | |
| TCCACTGATGAATTTACATT+TGG | + | chr3.2:89582607-89582626 | MS.gene42307:CDS | 30.0% | |
| TTAATTCCTGTCATAAGTGT+GGG | + | chr3.2:89583979-89583998 | MS.gene42307:intron | 30.0% | |
| ! | AAACAACACTTAGCTCATTT+TGG | + | chr3.2:89582092-89582111 | MS.gene42307:intron | 30.0% |
| ! | ACCTAGCATATTTTATCTCT+AGG | + | chr3.2:89585021-89585040 | MS.gene42307:intron | 30.0% |
| ! | GAACTTACCATATTGATTGA+AGG | + | chr3.2:89584179-89584198 | MS.gene42307:CDS | 30.0% |
| ! | GCACATCAATTTTGTAGTTT+TGG | + | chr3.2:89584102-89584121 | MS.gene42307:intron | 30.0% |
| ! | TCATTTTCGTTCCATTTTCT+AGG | + | chr3.2:89581798-89581817 | MS.gene42307:intron | 30.0% |
| ! | TTTCTTTTACTAACATGAGC+AGG | - | chr3.2:89584554-89584573 | None:intergenic | 30.0% |
| ! | TTTTCTGTTTGTAACTTCTC+TGG | + | chr3.2:89583806-89583825 | MS.gene42307:intron | 30.0% |
| !! | TTGAGAGTATTATAAAGGGA+GGG | + | chr3.2:89584823-89584842 | MS.gene42307:intron | 30.0% |
| !!! | CTTGATTTGTTTTCCATGAT+TGG | + | chr3.2:89583579-89583598 | MS.gene42307:intron | 30.0% |
| AACTCATATGCCAACACTAA+TGG | + | chr3.2:89583397-89583416 | MS.gene42307:intron | 35.0% | |
| AATAAATCCTCATGCAAGGT+GGG | + | chr3.2:89584938-89584957 | MS.gene42307:intron | 35.0% | |
| AATATGGTAAGTTCTCCCTT+TGG | - | chr3.2:89584173-89584192 | None:intergenic | 35.0% | |
| AATGAAGAGTCAACCAATCT+AGG | - | chr3.2:89583172-89583191 | None:intergenic | 35.0% | |
| AATGACAAAGTTTCACGAAG+AGG | + | chr3.2:89583228-89583247 | MS.gene42307:CDS | 35.0% | |
| AGGTGGAGGAGAATATATAT+GGG | + | chr3.2:89584787-89584806 | MS.gene42307:intron | 35.0% | |
| AGTGATACCTATGTTCGTTA+GGG | + | chr3.2:89583132-89583151 | MS.gene42307:intron | 35.0% | |
| ATAGTTCTCTTGCTCTTTCT+TGG | + | chr3.2:89583676-89583695 | MS.gene42307:intron | 35.0% | |
| ATCAAGAAGAAAAAGGCTCA+TGG | + | chr3.2:89582748-89582767 | MS.gene42307:CDS | 35.0% | |
| ATCCTTCTGACGTCAATATT+TGG | + | chr3.2:89583265-89583284 | MS.gene42307:intron | 35.0% | |
| ATGTCTTCAAGATTTCCGAT+GGG | - | chr3.2:89581941-89581960 | None:intergenic | 35.0% | |
| CAAAAACTGAGTGAATGTTG+AGG | - | chr3.2:89581835-89581854 | None:intergenic | 35.0% | |
| CTATATATTCACTTGCGTTG+CGG | + | chr3.2:89585183-89585202 | MS.gene42307:CDS | 35.0% | |
| CTTTCTCAGTTTCTTGAAGA+GGG | + | chr3.2:89582821-89582840 | MS.gene42307:CDS | 35.0% | |
| GAAAAGGAAGAAGAATACAG+TGG | - | chr3.2:89581696-89581715 | None:intergenic | 35.0% | |
| GAGTAATAAATCCTCATGCA+AGG | + | chr3.2:89584934-89584953 | MS.gene42307:intron | 35.0% | |
| TAATAAATCCTCATGCAAGG+TGG | + | chr3.2:89584937-89584956 | MS.gene42307:intron | 35.0% | |
| TACCAAATATTGACGTCAGA+AGG | - | chr3.2:89583270-89583289 | None:intergenic | 35.0% | |
| TAGTTCTCTTGCTCTTTCTT+GGG | + | chr3.2:89583677-89583696 | MS.gene42307:intron | 35.0% | |
| TGAAATGAAATTTCCCGAAG+TGG | - | chr3.2:89582253-89582272 | None:intergenic | 35.0% | |
| TGATAAGAGTAAACAAGCAC+AGG | - | chr3.2:89582453-89582472 | None:intergenic | 35.0% | |
| TTCCGATAGTATAACATCAG+CGG | - | chr3.2:89582155-89582174 | None:intergenic | 35.0% | |
| ! | ATTGGTAGCTGAAAGAACAT+CGG | + | chr3.2:89585148-89585167 | MS.gene42307:CDS | 35.0% |
| ! | ATTTTCTATTCGTCAGCCAA+AGG | + | chr3.2:89584154-89584173 | MS.gene42307:CDS | 35.0% |
| ! | CATTGATGGGCAATTACTTT+AGG | - | chr3.2:89582691-89582710 | None:intergenic | 35.0% |
| ! | TTTTCTATTCGTCAGCCAAA+GGG | + | chr3.2:89584155-89584174 | MS.gene42307:CDS | 35.0% |
| !! | AAAGGTAAGTTGCTTTGGAA+TGG | - | chr3.2:89581718-89581737 | None:intergenic | 35.0% |
| !! | AAGTTGCTTTGGAATGGAAA+AGG | - | chr3.2:89581712-89581731 | None:intergenic | 35.0% |
| !! | AGCTTATCTTAGGCTTTGTT+TGG | + | chr3.2:89584699-89584718 | MS.gene42307:intron | 35.0% |
| !! | ATTTGTTTTCCATGATTGGG+AGG | + | chr3.2:89583583-89583602 | MS.gene42307:intron | 35.0% |
| !! | GCTTATCTTAGGCTTTGTTT+GGG | + | chr3.2:89584700-89584719 | MS.gene42307:intron | 35.0% |
| !! | GTTGAGAGTATTATAAAGGG+AGG | + | chr3.2:89584822-89584841 | MS.gene42307:intron | 35.0% |
| !! | TTCTAAAGTTGAACCTCCAT+CGG | + | chr3.2:89584211-89584230 | MS.gene42307:CDS | 35.0% |
| !!! | TCAATTTTGTAGTTTTGGCG+CGG | + | chr3.2:89584107-89584126 | MS.gene42307:intron | 35.0% |
| AAAAGGAAGAGGCTTACAAG+GGG | - | chr3.2:89582226-89582245 | None:intergenic | 40.0% | |
| ACAGCCTAAAAACATGTCAG+TGG | - | chr3.2:89585125-89585144 | None:intergenic | 40.0% | |
| ACTACTTCCCTAACGAACAT+AGG | - | chr3.2:89583142-89583161 | None:intergenic | 40.0% | |
| ACTCGGGATCAAGAAGAAAA+AGG | + | chr3.2:89582741-89582760 | MS.gene42307:CDS | 40.0% | |
| AGAAACTGAGAAAGCTTGTG+AGG | - | chr3.2:89582815-89582834 | None:intergenic | 40.0% | |
| AGCAGGCAAAATCAACCAAA+TGG | - | chr3.2:89584537-89584556 | None:intergenic | 40.0% | |
| AGTAGTAGCAAGTCCTAGAT+TGG | + | chr3.2:89583156-89583175 | MS.gene42307:intron | 40.0% | |
| ATACTTACCAACTCCATACC+AGG | - | chr3.2:89582421-89582440 | None:intergenic | 40.0% | |
| ATATGCTAGGTTTGCGTGTT+TGG | - | chr3.2:89585012-89585031 | None:intergenic | 40.0% | |
| ATCTTGAAGACATCACCTTC+AGG | + | chr3.2:89581948-89581967 | MS.gene42307:CDS | 40.0% | |
| ATGAAATTTCCCGAAGTGGA+AGG | - | chr3.2:89582249-89582268 | None:intergenic | 40.0% | |
| ATGCAGGCCAAATTATGTGT+TGG | + | chr3.2:89582514-89582533 | MS.gene42307:intron | 40.0% | |
| ATGTTGAGTGAGATGGAGTT+CGG | - | chr3.2:89581754-89581773 | None:intergenic | 40.0% | |
| ATTCCTCAACTCTGGTTGAA+GGG | + | chr3.2:89583539-89583558 | MS.gene42307:intron | 40.0% | |
| ATTTGGGAAGCAACTTGAAG+TGG | + | chr3.2:89585208-89585227 | MS.gene42307:CDS | 40.0% | |
| CAGTGATACCTATGTTCGTT+AGG | + | chr3.2:89583131-89583150 | MS.gene42307:intron | 40.0% | |
| CATGAATATCATCACGCACA+AGG | - | chr3.2:89582497-89582516 | None:intergenic | 40.0% | |
| CTCCGCTGATGTTATACTAT+CGG | + | chr3.2:89582150-89582169 | MS.gene42307:CDS | 40.0% | |
| GAAAAGGAAGAGGCTTACAA+GGG | - | chr3.2:89582227-89582246 | None:intergenic | 40.0% | |
| GAAGAAGAATACAGTGGAAG+AGG | - | chr3.2:89581690-89581709 | None:intergenic | 40.0% | |
| GAGGTGGAGGAGAATATATA+TGG | + | chr3.2:89584786-89584805 | MS.gene42307:intron | 40.0% | |
| GAGTTAAGAGGGTAAGGAAT+GGG | + | chr3.2:89584722-89584741 | MS.gene42307:intron | 40.0% | |
| GATGTCTTCAAGATTTCCGA+TGG | - | chr3.2:89581942-89581961 | None:intergenic | 40.0% | |
| GCAGGCAAAATCAACCAAAT+GGG | - | chr3.2:89584536-89584555 | None:intergenic | 40.0% | |
| GCTTTCTCAGTTTCTTGAAG+AGG | + | chr3.2:89582820-89582839 | MS.gene42307:CDS | 40.0% | |
| GTGCTATAAAGCTCCAATCA+TGG | - | chr3.2:89583708-89583727 | None:intergenic | 40.0% | |
| GTTGAAACAAGGTGAGATTG+TGG | + | chr3.2:89582357-89582376 | MS.gene42307:CDS | 40.0% | |
| TATAAAAGTGGGAGACGAGA+AGG | - | chr3.2:89582959-89582978 | None:intergenic | 40.0% | |
| TATCTGGATGTTGAGTGAGA+TGG | - | chr3.2:89581761-89581780 | None:intergenic | 40.0% | |
| TGCATGCCCTTCAATCAATA+TGG | - | chr3.2:89584189-89584208 | None:intergenic | 40.0% | |
| TGGGAACTCACAAATGCATT+TGG | - | chr3.2:89584889-89584908 | None:intergenic | 40.0% | |
| TGTTCCAACGAGATAAAGAC+CGG | - | chr3.2:89581918-89581937 | None:intergenic | 40.0% | |
| TTATACTATCGGAAGACACG+AGG | + | chr3.2:89582161-89582180 | MS.gene42307:CDS | 40.0% | |
| TTCATGTTCCTGCAAGTGAA+GGG | - | chr3.2:89581864-89581883 | None:intergenic | 40.0% | |
| TTGGTTCACACCATTGTTCA+GGG | + | chr3.2:89582111-89582130 | MS.gene42307:intron | 40.0% | |
| TTTCAACGATTCCTCAACTC+TGG | + | chr3.2:89583531-89583550 | MS.gene42307:intron | 40.0% | |
| TTTCATGTTCCTGCAAGTGA+AGG | - | chr3.2:89581865-89581884 | None:intergenic | 40.0% | |
| ! | CGTCAATTTTCGGAGATACA+AGG | + | chr3.2:89582846-89582865 | MS.gene42307:CDS | 40.0% |
| ! | GAAGAGGGTTCGTCAATTTT+CGG | + | chr3.2:89582836-89582855 | MS.gene42307:CDS | 40.0% |
| ! | GAGAATCCCTCATCTTGTTT+GGG | + | chr3.2:89584747-89584766 | MS.gene42307:intron | 40.0% |
| ! | TCGACCACTGACATGTTTTT+AGG | + | chr3.2:89585118-89585137 | MS.gene42307:intron | 40.0% |
| ! | TCTTCCTTTTCCTTCCACTT+CGG | + | chr3.2:89582236-89582255 | MS.gene42307:intron | 40.0% |
| ! | TTCTCGTCTTTTCTCCCATT+TGG | + | chr3.2:89584519-89584538 | MS.gene42307:intron | 40.0% |
| ! | TTTGGTTCACACCATTGTTC+AGG | + | chr3.2:89582110-89582129 | MS.gene42307:intron | 40.0% |
| !! | CTTGTTTGGGAGGTTGTTTT+TGG | + | chr3.2:89584760-89584779 | MS.gene42307:intron | 40.0% |
| !! | GCTTTGTTTGGGAGTTAAGA+GGG | + | chr3.2:89584711-89584730 | MS.gene42307:intron | 40.0% |
| AAACCCGGTCTTTATCTCGT+TGG | + | chr3.2:89581911-89581930 | MS.gene42307:CDS | 45.0% | |
| AAAGGGAACAACTTGTGCTC+AGG | + | chr3.2:89582332-89582351 | MS.gene42307:CDS | 45.0% | |
| AAATGGCGAGAGTCTTTCCA+CGG | + | chr3.2:89584271-89584290 | MS.gene42307:CDS | 45.0% | |
| AACTGACTGAACGATATGGG+CGG | + | chr3.2:89582635-89582654 | MS.gene42307:intron | 45.0% | |
| AACTGAGAAAGCTTGTGAGG+AGG | - | chr3.2:89582812-89582831 | None:intergenic | 45.0% | |
| ACAACCTCCCAAACAAGATG+AGG | - | chr3.2:89584757-89584776 | None:intergenic | 45.0% | |
| AGAATACAGTGGAAGAGGTG+CGG | - | chr3.2:89581685-89581704 | None:intergenic | 45.0% | |
| AGATGGAGTTCGGAGGATAA+AGG | - | chr3.2:89581744-89581763 | None:intergenic | 45.0% | |
| AGGAGAAAGAGAGGAGGAAA+GGG | - | chr3.2:89584980-89584999 | None:intergenic | 45.0% | |
| AGGTCCATGTGCTTTGGTAT+CGG | + | chr3.2:89582564-89582583 | MS.gene42307:CDS | 45.0% | |
| ATAAAGGGAGGGAGACAAGA+TGG | + | chr3.2:89584834-89584853 | MS.gene42307:intron | 45.0% | |
| ATACCAAAGCACATGGACCT+GGG | - | chr3.2:89582564-89582583 | None:intergenic | 45.0% | |
| ATACCAGGATCACTGATACC+AGG | - | chr3.2:89582406-89582425 | None:intergenic | 45.0% | |
| ATGGAGTTCGGAGGATAAAG+GGG | - | chr3.2:89581742-89581761 | None:intergenic | 45.0% | |
| CAACCTCCCAAACAAGATGA+GGG | - | chr3.2:89584756-89584775 | None:intergenic | 45.0% | |
| CACTTGCGTTGCGGAAATTT+GGG | + | chr3.2:89585192-89585211 | MS.gene42307:CDS | 45.0% | |
| CTAAGGACCTTTATTCCCAC+TGG | - | chr3.2:89583371-89583390 | None:intergenic | 45.0% | |
| CTATTGGGAAGCTATTACCG+TGG | - | chr3.2:89584291-89584310 | None:intergenic | 45.0% | |
| GAAGTGGAAGGAAAAGGAAG+AGG | - | chr3.2:89582237-89582256 | None:intergenic | 45.0% | |
| GATGGAGTTCGGAGGATAAA+GGG | - | chr3.2:89581743-89581762 | None:intergenic | 45.0% | |
| GATTCCTCAACTCTGGTTGA+AGG | + | chr3.2:89583538-89583557 | MS.gene42307:intron | 45.0% | |
| GGAAAAGGAAGAGGCTTACA+AGG | - | chr3.2:89582228-89582247 | None:intergenic | 45.0% | |
| GGAGAATCCCTCATCTTGTT+TGG | + | chr3.2:89584746-89584765 | MS.gene42307:intron | 45.0% | |
| GGAGTTAAGAGGGTAAGGAA+TGG | + | chr3.2:89584721-89584740 | MS.gene42307:intron | 45.0% | |
| GGGGAAAAGGTAAGTTGCTT+TGG | - | chr3.2:89581723-89581742 | None:intergenic | 45.0% | |
| GGTATCACTGATGCAACTTG+TGG | - | chr3.2:89583121-89583140 | None:intergenic | 45.0% | |
| GTGCGTGATGATATTCATGC+AGG | + | chr3.2:89582498-89582517 | MS.gene42307:intron | 45.0% | |
| GTTCCAACGAGATAAAGACC+GGG | - | chr3.2:89581917-89581936 | None:intergenic | 45.0% | |
| GTTTGGGAGTTAAGAGGGTA+AGG | + | chr3.2:89584716-89584735 | MS.gene42307:intron | 45.0% | |
| TATCTCGTTGGAACACCCAT+CGG | + | chr3.2:89581923-89581942 | MS.gene42307:CDS | 45.0% | |
| TATGTGCCCACACTTATGAC+AGG | - | chr3.2:89583988-89584007 | None:intergenic | 45.0% | |
| TCACTTGCGTTGCGGAAATT+TGG | + | chr3.2:89585191-89585210 | MS.gene42307:CDS | 45.0% | |
| TCCATGATTGGGAGGTTATG+CGG | + | chr3.2:89583591-89583610 | MS.gene42307:intron | 45.0% | |
| TCCTCAAGATTGGTGAAGCT+GGG | + | chr3.2:89583774-89583793 | MS.gene42307:intron | 45.0% | |
| TGGTATCAGTGATCCTGGTA+TGG | + | chr3.2:89582405-89582424 | MS.gene42307:CDS | 45.0% | |
| TGGTGCAGTAACCGTAGTTA+AGG | - | chr3.2:89583748-89583767 | None:intergenic | 45.0% | |
| TTAAGAGGGTAAGGAATGGG+AGG | + | chr3.2:89584725-89584744 | MS.gene42307:intron | 45.0% | |
| TTCATCAGTGGATAAACCCG+AGG | - | chr3.2:89582599-89582618 | None:intergenic | 45.0% | |
| TTCGGAGGATAAAGGGGAAA+AGG | - | chr3.2:89581736-89581755 | None:intergenic | 45.0% | |
| TTCTCAAGCTCAATGTCCGA+TGG | - | chr3.2:89584230-89584249 | None:intergenic | 45.0% | |
| TTCTTGGGTCATGCCATGAT+TGG | + | chr3.2:89583692-89583711 | MS.gene42307:intron | 45.0% | |
| TTTCCCGAAGTGGAAGGAAA+AGG | - | chr3.2:89582243-89582262 | None:intergenic | 45.0% | |
| ! | AATCCCTCATCTTGTTTGGG+AGG | + | chr3.2:89584750-89584769 | MS.gene42307:intron | 45.0% |
| ! | CTGGTTGAAGGGATGCTTTT+GGG | + | chr3.2:89583550-89583569 | MS.gene42307:intron | 45.0% |
| ! | CTTCCTTTTCCTTCCACTTC+GGG | + | chr3.2:89582237-89582256 | MS.gene42307:intron | 45.0% |
| ! | TCTGGTTGAAGGGATGCTTT+TGG | + | chr3.2:89583549-89583568 | MS.gene42307:intron | 45.0% |
| !! | AGAGCTTTGAGGAGAAAGAG+AGG | - | chr3.2:89584989-89585008 | None:intergenic | 45.0% |
| !! | CGGTTTTCTTCCAAAGCACT+CGG | + | chr3.2:89582724-89582743 | MS.gene42307:CDS | 45.0% |
| !! | GGCTTTGTTTGGGAGTTAAG+AGG | + | chr3.2:89584710-89584729 | MS.gene42307:intron | 45.0% |
| !! | GGTTTTCTTCCAAAGCACTC+GGG | + | chr3.2:89582725-89582744 | MS.gene42307:CDS | 45.0% |
| !!! | TAGTTTTGGCGCGGTACTTT+TGG | + | chr3.2:89584116-89584135 | MS.gene42307:intron | 45.0% |
| AAAGAGAGGAGGAAAGGGGA+AGG | - | chr3.2:89584975-89584994 | None:intergenic | 50.0% | |
| AAAGCACATGGACCTGGGAT+TGG | - | chr3.2:89582559-89582578 | None:intergenic | 50.0% | |
| AATCCCAGGTCCATGTGCTT+TGG | + | chr3.2:89582558-89582577 | MS.gene42307:CDS | 50.0% | |
| ACCAATCTTGAGGAGAGGCA+TGG | - | chr3.2:89583768-89583787 | None:intergenic | 50.0% | |
| ACCATGCCTCTCCTCAAGAT+TGG | + | chr3.2:89583764-89583783 | MS.gene42307:intron | 50.0% | |
| AGAGCCGATACCAAAGCACA+TGG | - | chr3.2:89582571-89582590 | None:intergenic | 50.0% | |
| CAGTGATCCTGGTATGGAGT+TGG | + | chr3.2:89582411-89582430 | MS.gene42307:CDS | 50.0% | |
| CATCCCTTCAACCAGAGTTG+AGG | - | chr3.2:89583545-89583564 | None:intergenic | 50.0% | |
| CATGGCTTCAGCAGAGCAAA+CGG | + | chr3.2:89582766-89582785 | MS.gene42307:CDS | 50.0% | |
| CCTCAAGATTGGTGAAGCTG+GGG | + | chr3.2:89583775-89583794 | MS.gene42307:intron | 50.0% | |
| CTCCTCAAGATTGGTGAAGC+TGG | + | chr3.2:89583773-89583792 | MS.gene42307:intron | 50.0% | |
| CTTCTTGATCCCGAGTGCTT+TGG | - | chr3.2:89582737-89582756 | None:intergenic | 50.0% | |
| GAGGAGAAAGAGAGGAGGAA+AGG | - | chr3.2:89584981-89585000 | None:intergenic | 50.0% | |
| GATACCAAAGCACATGGACC+TGG | - | chr3.2:89582565-89582584 | None:intergenic | 50.0% | |
| GCTTCACCAATCTTGAGGAG+AGG | - | chr3.2:89583773-89583792 | None:intergenic | 50.0% | |
| GGAGAAAGAGAGGAGGAAAG+GGG | - | chr3.2:89584979-89584998 | None:intergenic | 50.0% | |
| GTGCTCAGGAGGTTGAAACA+AGG | + | chr3.2:89582346-89582365 | MS.gene42307:CDS | 50.0% | |
| GTGGCACTTATAAGTGACGC+TGG | + | chr3.2:89582376-89582395 | MS.gene42307:CDS | 50.0% | |
| GTTCCTGTTGTTCCAATCCC+AGG | + | chr3.2:89582544-89582563 | MS.gene42307:CDS | 50.0% | |
| TCAAGCTCAATGTCCGATGG+AGG | - | chr3.2:89584227-89584246 | None:intergenic | 50.0% | |
| TGAGTCTTCCCTTCACTTGC+AGG | + | chr3.2:89581853-89581872 | MS.gene42307:intron | 50.0% | |
| TGCGTGTTTGGAGAGCTTTG+AGG | - | chr3.2:89585000-89585019 | None:intergenic | 50.0% | |
| TGGGAAGCAACTTGAAGTGG+AGG | + | chr3.2:89585211-89585230 | MS.gene42307:CDS | 50.0% | |
| TTGAGTGAGATGGAGTTCGG+AGG | - | chr3.2:89581751-89581770 | None:intergenic | 50.0% | |
| !! | GCTTTGAGGAGAAAGAGAGG+AGG | - | chr3.2:89584986-89585005 | None:intergenic | 50.0% |
| !!! | AGGTTGTTTTTGGAGCGAGG+TGG | + | chr3.2:89584770-89584789 | MS.gene42307:intron | 50.0% |
| !!! | TTGTTTTTGGAGCGAGGTGG+AGG | + | chr3.2:89584773-89584792 | MS.gene42307:intron | 50.0% |
| ACCATTGTTCAGGGCTCTCC+GGG | + | chr3.2:89582120-89582139 | MS.gene42307:intron | 55.0% | |
| ACGCCTGGTATCAGTGATCC+TGG | + | chr3.2:89582400-89582419 | MS.gene42307:CDS | 55.0% | |
| ATAAGTGACGCTGGAACGCC+TGG | + | chr3.2:89582385-89582404 | MS.gene42307:CDS | 55.0% | |
| CACCATTGTTCAGGGCTCTC+CGG | + | chr3.2:89582119-89582138 | MS.gene42307:intron | 55.0% | |
| CATCAGCGGAGTTCAACACC+CGG | - | chr3.2:89582141-89582160 | None:intergenic | 55.0% | |
| CCCCAGCTTCACCAATCTTG+AGG | - | chr3.2:89583778-89583797 | None:intergenic | 55.0% | |
| GCAGTGGAAAACGCCATCCA+GGG | - | chr3.2:89581663-89581682 | None:intergenic | 55.0% | |
| GCCGCATAACCTCCCAATCA+TGG | - | chr3.2:89583595-89583614 | None:intergenic | 55.0% | |
| GGACCTGGGATTGGAACAAC+AGG | - | chr3.2:89582550-89582569 | None:intergenic | 55.0% | |
| GGGAACAACTTGTGCTCAGG+AGG | + | chr3.2:89582335-89582354 | MS.gene42307:CDS | 55.0% | |
| GTAGTCTCCCACCTTGCATG+AGG | - | chr3.2:89584948-89584967 | None:intergenic | 55.0% | |
| ! | TGTTGCTTCGGCGATTACCC+TGG | + | chr3.2:89581643-89581662 | MS.gene42307:CDS | 55.0% |
| !! | GGTATCGGCTCTTTCTGCCT+CGG | + | chr3.2:89582579-89582598 | MS.gene42307:CDS | 55.0% |
| !! | GTATCGGCTCTTTCTGCCTC+GGG | + | chr3.2:89582580-89582599 | MS.gene42307:CDS | 55.0% |
| !!! | GGGAGGTTGTTTTTGGAGCG+AGG | + | chr3.2:89584767-89584786 | MS.gene42307:intron | 55.0% |
| ACCCGGAGAGCCCTGAACAA+TGG | - | chr3.2:89582124-89582143 | None:intergenic | 60.0% | |
| CGCTCGCAGCATCTCAAACC+CGG | + | chr3.2:89581896-89581915 | MS.gene42307:CDS | 60.0% | |
| GCTTCGGCGATTACCCTGGA+TGG | + | chr3.2:89581647-89581666 | MS.gene42307:CDS | 60.0% | |
| GGCAGTGGAAAACGCCATCC+AGG | - | chr3.2:89581664-89581683 | None:intergenic | 60.0% | |
| ! | CGGAAGACACGAGGCACTCT+GGG | + | chr3.2:89582170-89582189 | MS.gene42307:CDS | 60.0% |
| ! | TCGGAAGACACGAGGCACTC+TGG | + | chr3.2:89582169-89582188 | MS.gene42307:CDS | 60.0% |
| ! | CAGTGGAAGAGGTGCGGCAG+TGG | - | chr3.2:89581679-89581698 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 89581642 | 89585244 | 89581642 | ID=MS.gene42307 |
| chr3.2 | mRNA | 89581642 | 89585244 | 89581642 | ID=MS.gene42307.t1;Parent=MS.gene42307 |
| chr3.2 | exon | 89581642 | 89581791 | 89581642 | ID=MS.gene42307.t1.exon1;Parent=MS.gene42307.t1 |
| chr3.2 | CDS | 89581642 | 89581791 | 89581642 | ID=cds.MS.gene42307.t1;Parent=MS.gene42307.t1 |
| chr3.2 | exon | 89581875 | 89581969 | 89581875 | ID=MS.gene42307.t1.exon2;Parent=MS.gene42307.t1 |
| chr3.2 | CDS | 89581875 | 89581969 | 89581875 | ID=cds.MS.gene42307.t1;Parent=MS.gene42307.t1 |
| chr3.2 | exon | 89582132 | 89582228 | 89582132 | ID=MS.gene42307.t1.exon3;Parent=MS.gene42307.t1 |
| chr3.2 | CDS | 89582132 | 89582228 | 89582132 | ID=cds.MS.gene42307.t1;Parent=MS.gene42307.t1 |
| chr3.2 | exon | 89582304 | 89582432 | 89582304 | ID=MS.gene42307.t1.exon4;Parent=MS.gene42307.t1 |
| chr3.2 | CDS | 89582304 | 89582432 | 89582304 | ID=cds.MS.gene42307.t1;Parent=MS.gene42307.t1 |
| chr3.2 | exon | 89582520 | 89582628 | 89582520 | ID=MS.gene42307.t1.exon5;Parent=MS.gene42307.t1 |
| chr3.2 | CDS | 89582520 | 89582628 | 89582520 | ID=cds.MS.gene42307.t1;Parent=MS.gene42307.t1 |
| chr3.2 | exon | 89582723 | 89582867 | 89582723 | ID=MS.gene42307.t1.exon6;Parent=MS.gene42307.t1 |
| chr3.2 | CDS | 89582723 | 89582867 | 89582723 | ID=cds.MS.gene42307.t1;Parent=MS.gene42307.t1 |
| chr3.2 | exon | 89583207 | 89583249 | 89583207 | ID=MS.gene42307.t1.exon7;Parent=MS.gene42307.t1 |
| chr3.2 | CDS | 89583207 | 89583249 | 89583207 | ID=cds.MS.gene42307.t1;Parent=MS.gene42307.t1 |
| chr3.2 | exon | 89584119 | 89584292 | 89584119 | ID=MS.gene42307.t1.exon8;Parent=MS.gene42307.t1 |
| chr3.2 | CDS | 89584119 | 89584292 | 89584119 | ID=cds.MS.gene42307.t1;Parent=MS.gene42307.t1 |
| chr3.2 | exon | 89585140 | 89585244 | 89585140 | ID=MS.gene42307.t1.exon9;Parent=MS.gene42307.t1 |
| chr3.2 | CDS | 89585140 | 89585244 | 89585140 | ID=cds.MS.gene42307.t1;Parent=MS.gene42307.t1 |
| Gene Sequence |
| Protein sequence |
