AlfalfaGEDB | MS.gene53646

M. sativa cultivar XinJiangDaYe / MS.gene53646

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53646.t1	KEH15851.1	49.5	218	99	5	33	249	99	306	1.90E-43	186.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53646.t1	Q9SCQ5	38.1	176	91	8	33	195	15	185	5.0e-13	76.6

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53646.t1	A0A072TFN6	49.5	218	99	5	33	249	99	306	1.3e-43	186.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene91885	MS.gene53646	PPI
MS.gene041325	MS.gene53646	PPI
MS.gene01653	MS.gene53646	PPI
MS.gene96120	MS.gene53646	PPI
MS.gene36764	MS.gene53646	PPI
MS.gene36942	MS.gene53646	PPI
MS.gene047137	MS.gene53646	PPI
MS.gene54959	MS.gene53646	PPI
MS.gene94457	MS.gene53646	PPI
MS.gene045439	MS.gene53646	PPI
MS.gene36763	MS.gene53646	PPI
MS.gene006730	MS.gene53646	PPI
MS.gene031575	MS.gene53646	PPI
MS.gene035630	MS.gene53646	PPI
MS.gene041326	MS.gene53646	PPI
MS.gene047136	MS.gene53646	PPI
MS.gene055754	MS.gene53646	PPI
MS.gene033695	MS.gene53646	PPI
MS.gene045448	MS.gene53646	PPI
MS.gene024262	MS.gene53646	PPI
MS.gene032853	MS.gene53646	PPI
MS.gene36752	MS.gene53646	PPI
MS.gene51795	MS.gene53646	PPI
MS.gene91884	MS.gene53646	PPI
MS.gene78164	MS.gene53646	PPI
MS.gene32300	MS.gene53646	PPI
MS.gene003456	MS.gene53646	PPI
MS.gene045440	MS.gene53646	PPI
MS.gene53646	MS.gene072231	PPI
MS.gene53646	MS.gene069763	PPI
MS.gene006736	MS.gene53646	PPI
MS.gene045441	MS.gene53646	PPI
MS.gene006692	MS.gene53646	PPI
MS.gene94458	MS.gene53646	PPI
MS.gene73780	MS.gene53646	PPI
MS.gene045772	MS.gene53646	PPI
MS.gene021295	MS.gene53646	PPI
MS.gene23706	MS.gene53646	PPI
MS.gene36804	MS.gene53646	PPI
MS.gene69561	MS.gene53646	PPI
MS.gene072003	MS.gene53646	PPI
MS.gene91886	MS.gene53646	PPI
MS.gene032852	MS.gene53646	PPI
MS.gene069762	MS.gene53646	PPI
MS.gene072000	MS.gene53646	PPI
MS.gene53646	MS.gene045449	PPI
MS.gene032379	MS.gene53646	PPI
MS.gene065373	MS.gene53646	PPI
MS.gene032862	MS.gene53646	PPI
MS.gene031603	MS.gene53646	PPI
MS.gene96357	MS.gene53646	PPI
MS.gene51793	MS.gene53646	PPI
MS.gene071257	MS.gene53646	PPI
MS.gene53646	MS.gene36943	PPI
MS.gene54960	MS.gene53646	PPI
MS.gene033694	MS.gene53646	PPI
MS.gene36809	MS.gene53646	PPI
MS.gene045437	MS.gene53646	PPI
MS.gene95902	MS.gene53646	PPI
MS.gene32305	MS.gene53646	PPI
MS.gene031573	MS.gene53646	PPI
MS.gene36807	MS.gene53646	PPI
MS.gene006728	MS.gene53646	PPI
MS.gene36810	MS.gene53646	PPI
MS.gene36743	MS.gene53646	PPI
MS.gene94460	MS.gene53646	PPI
MS.gene007794	MS.gene53646	PPI
MS.gene045451	MS.gene53646	PPI
MS.gene73831	MS.gene53646	PPI
MS.gene041323	MS.gene53646	PPI
MS.gene072244	MS.gene53646	PPI
MS.gene002112	MS.gene53646	PPI
MS.gene031570	MS.gene53646	PPI
MS.gene031577	MS.gene53646	PPI
MS.gene53646	MS.gene032860	PPI
MS.gene032861	MS.gene53646	PPI
MS.gene028696	MS.gene53646	PPI
MS.gene53646	MS.gene52136	PPI
MS.gene003455	MS.gene53646	PPI
MS.gene045446	MS.gene53646	PPI
MS.gene006727	MS.gene53646	PPI
MS.gene53646	MS.gene074346	PPI
MS.gene006725	MS.gene53646	PPI
MS.gene29873	MS.gene53646	PPI
MS.gene006723	MS.gene53646	PPI
MS.gene031572	MS.gene53646	PPI
MS.gene045452	MS.gene53646	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53646.t1	MTR_0492s0020	50.431	232	104	5	19	249	85	306	8.02e-62	202
MS.gene53646.t1	MTR_0492s0020	58.065	62	24	1	19	78	11	72	5.27e-12	66.2
MS.gene53646.t1	MTR_0543s0010	50.215	233	105	5	18	249	84	306	1.15e-61	202
MS.gene53646.t1	MTR_0543s0010	58.065	62	24	1	19	78	11	72	5.02e-12	66.2
MS.gene53646.t1	MTR_3g108150	48.117	239	110	6	18	251	11	240	1.34e-60	197
MS.gene53646.t1	MTR_7g088260	45.798	238	115	4	18	251	89	316	4.69e-54	182
MS.gene53646.t1	MTR_3g108560	43.460	237	120	8	17	248	17	244	1.28e-47	162
MS.gene53646.t1	MTR_3g108560	38.435	294	138	9	17	276	17	301	1.02e-45	159
MS.gene53646.t1	MTR_3g087260	49.733	187	77	4	20	204	12	183	1.03e-41	149
MS.gene53646.t1	MTR_3g110010	48.691	191	93	3	20	207	13	201	1.34e-41	152
MS.gene53646.t1	MTR_3g110010	47.328	131	64	3	131	260	216	342	8.50e-23	98.6
MS.gene53646.t1	MTR_3g109982	48.691	191	93	3	20	207	13	201	1.38e-41	153
MS.gene53646.t1	MTR_3g109982	47.328	131	64	3	131	260	216	342	4.03e-23	99.8
MS.gene53646.t1	MTR_7g056020	42.857	245	117	8	16	256	12	237	9.25e-36	135
MS.gene53646.t1	MTR_1g041245	37.083	240	133	7	20	250	11	241	7.62e-35	130
MS.gene53646.t1	MTR_7g056447	42.857	182	91	4	20	193	9	185	3.72e-32	120
MS.gene53646.t1	MTR_7g098480	37.931	261	136	8	20	268	18	264	2.00e-31	122
MS.gene53646.t1	MTR_3g036250	38.860	193	107	4	17	200	2	192	1.20e-30	118
MS.gene53646.t1	MTR_3g040700	38.947	190	105	4	20	200	43	230	1.53e-29	116
MS.gene53646.t1	MTR_7g056433	36.052	233	132	6	16	238	8	233	1.85e-29	115
MS.gene53646.t1	MTR_4g080610	37.872	235	112	5	18	250	8	210	1.88e-29	115
MS.gene53646.t1	MTR_7g115270	37.681	207	114	5	10	202	2	207	3.67e-29	115
MS.gene53646.t1	MTR_4g134150	41.530	183	98	4	19	198	13	189	5.48e-29	110
MS.gene53646.t1	MTR_7g098510	34.766	256	147	7	20	265	18	263	6.24e-29	114
MS.gene53646.t1	MTR_3g467400	35.827	254	132	9	20	250	3	248	3.90e-28	111
MS.gene53646.t1	MTR_8g085430	37.563	197	111	3	20	204	11	207	4.37e-28	110
MS.gene53646.t1	MTR_7g032380	35.714	238	128	7	20	248	11	232	1.25e-27	110
MS.gene53646.t1	MTR_3g105060	30.576	278	162	8	20	270	14	287	6.42e-27	108
MS.gene53646.t1	MTR_7g098570	35.769	260	145	8	20	268	20	268	1.26e-26	108
MS.gene53646.t1	MTR_3g082890	40.000	190	104	5	17	199	14	200	9.94e-26	105
MS.gene53646.t1	MTR_3g023630	37.173	191	111	4	18	201	6	194	1.03e-25	105
MS.gene53646.t1	MTR_3g082890	40.000	190	104	5	17	199	94	280	1.29e-25	106
MS.gene53646.t1	MTR_7g032370	39.779	181	97	4	32	204	2	178	1.28e-24	101
MS.gene53646.t1	MTR_7g033990	36.626	243	134	8	20	250	11	245	1.34e-24	102
MS.gene53646.t1	MTR_7g007080	32.463	268	161	8	18	271	2	263	6.74e-24	100
MS.gene53646.t1	MTR_5g008920	38.298	188	104	6	22	202	14	196	3.27e-22	95.5
MS.gene53646.t1	MTR_7g114710	38.043	184	109	4	20	198	13	196	6.33e-22	94.7
MS.gene53646.t1	MTR_7g056420	35.450	189	93	4	19	204	8	170	1.70e-21	95.1
MS.gene53646.t1	MTR_7g056430	35.450	189	93	4	19	204	8	170	2.46e-21	94.7
MS.gene53646.t1	MTR_7g034110	37.073	205	105	7	20	209	11	206	2.58e-21	92.8
MS.gene53646.t1	MTR_7g060470	35.025	197	112	4	19	203	2	194	6.32e-21	92.0
MS.gene53646.t1	MTR_7g034115	37.500	184	106	4	20	196	11	192	1.61e-20	90.9
MS.gene53646.t1	MTR_3g107100	30.332	211	111	5	15	204	6	201	2.63e-20	90.5
MS.gene53646.t1	MTR_7g056277	28.889	270	164	6	11	266	250	505	2.80e-19	88.2
MS.gene53646.t1	MTR_6g044560	31.229	301	168	9	13	277	171	468	4.44e-19	87.4
MS.gene53646.t1	MTR_6g044572	31.525	295	161	9	20	277	2	292	7.40e-19	86.3
MS.gene53646.t1	MTR_5g073370	31.855	248	155	7	17	255	2	244	7.47e-19	86.3
MS.gene53646.t1	MTR_7g056287	29.389	262	157	6	19	266	2	249	1.01e-18	85.5
MS.gene53646.t1	MTR_4g039440	31.250	240	145	6	20	248	34	264	1.09e-18	85.9
MS.gene53646.t1	MTR_7g033945	34.756	164	94	3	20	172	11	172	1.73e-18	81.6
MS.gene53646.t1	MTR_5g008950	30.242	248	152	7	22	262	1	234	2.46e-18	84.7
MS.gene53646.t1	MTR_5g058100	34.328	201	117	5	13	203	2	197	2.97e-18	84.3
MS.gene53646.t1	MTR_3g114200	39.869	153	88	3	1	150	1	152	9.21e-18	79.0
MS.gene53646.t1	MTR_1g108820	31.746	252	147	9	14	250	2	243	7.45e-17	80.1
MS.gene53646.t1	MTR_7g033915	30.612	245	128	7	20	250	11	227	8.42e-17	80.1
MS.gene53646.t1	MTR_3g095600	31.535	241	121	9	20	247	4	213	1.06e-16	79.0
MS.gene53646.t1	MTR_1g107385	28.674	279	167	8	19	270	31	304	1.12e-16	80.1
MS.gene53646.t1	MTR_3g107120	32.157	255	141	9	20	250	9	255	1.18e-16	79.7
MS.gene53646.t1	MTR_3g071850	34.199	231	128	9	20	238	24	242	1.27e-16	80.5
MS.gene53646.t1	MTR_1g108820	32.653	245	142	9	20	250	8	243	1.98e-16	79.0
MS.gene53646.t1	MTR_7g026500	33.838	198	116	5	20	203	14	210	2.64e-16	79.0
MS.gene53646.t1	MTR_6g045333	34.874	238	117	11	20	238	61	279	3.01e-16	79.0
MS.gene53646.t1	MTR_1g066830	31.855	248	150	8	20	255	8	248	3.60e-16	78.2
MS.gene53646.t1	MTR_5g012840	32.948	173	111	4	38	205	6	178	5.12e-16	77.4
MS.gene53646.t1	MTR_5g073420	31.373	255	151	7	20	263	11	252	7.14e-16	77.4
MS.gene53646.t1	MTR_3g107160	29.259	270	175	7	16	273	6	271	9.82e-16	77.0
MS.gene53646.t1	MTR_7g075820	26.733	303	170	8	19	283	5	293	1.39e-15	76.6
MS.gene53646.t1	MTR_1g085120	30.126	239	155	4	19	248	91	326	1.59e-15	76.6
MS.gene53646.t1	MTR_1g085120	30.126	239	155	4	19	248	166	401	1.89e-15	76.6
MS.gene53646.t1	MTR_1g085120	30.126	239	155	4	19	248	178	413	2.03e-15	76.6
MS.gene53646.t1	MTR_6g011460	30.508	236	153	5	20	249	46	276	2.50e-15	76.3
MS.gene53646.t1	MTR_3g113782	54.545	66	27	1	1	66	1	63	3.99e-15	69.7
MS.gene53646.t1	MTR_5g045510	34.973	183	109	6	22	197	14	193	7.86e-15	74.3
MS.gene53646.t1	MTR_7g033940	50.000	78	39	0	22	99	96	173	1.64e-14	71.6
MS.gene53646.t1	MTR_2g020170	39.344	122	67	4	18	135	20	138	2.59e-14	69.3
MS.gene53646.t1	MTR_6g040270	35.233	193	118	5	22	208	10	201	2.86e-14	72.8
MS.gene53646.t1	MTR_5g058000	30.435	253	156	6	20	263	8	249	1.15e-13	70.9
MS.gene53646.t1	MTR_6g022500	27.083	288	190	6	9	285	90	368	2.10e-13	70.5
MS.gene53646.t1	MTR_1089s0010	35.897	195	108	7	14	197	2	190	2.66e-13	69.7
MS.gene53646.t1	MTR_4g024780	30.928	194	109	9	3	181	131	314	4.96e-13	69.3
MS.gene53646.t1	MTR_6g022360	28.526	312	167	10	17	290	38	331	1.06e-12	68.2
MS.gene53646.t1	MTR_2g007500	29.493	217	134	5	20	230	14	217	1.12e-12	67.8
MS.gene53646.t1	MTR_7g098590	40.594	101	60	0	7	107	5	105	1.40e-12	64.3
MS.gene53646.t1	MTR_5g061680	34.574	188	110	6	20	197	11	195	1.42e-12	67.4
MS.gene53646.t1	MTR_7g055943	29.167	264	162	10	20	268	40	293	2.43e-12	67.4
MS.gene53646.t1	MTR_7g007340	30.493	223	121	6	13	230	6	199	4.62e-12	66.2
MS.gene53646.t1	MTR_3g108140	59.091	66	17	2	1	66	1	56	7.58e-12	63.2
MS.gene53646.t1	MTR_8g014160	29.680	219	122	8	16	209	37	248	8.02e-12	65.5
MS.gene53646.t1	MTR_3g099830	28.462	260	157	6	20	270	12	251	8.67e-12	65.5
MS.gene53646.t1	MTR_8g467800	31.980	197	119	6	13	196	10	204	1.06e-11	65.1
MS.gene53646.t1	MTR_5g087940	30.769	169	112	3	14	181	20	184	1.23e-11	65.1
MS.gene53646.t1	MTR_7g081290	61.111	54	19	1	15	68	15	66	1.70e-11	63.5
MS.gene53646.t1	MTR_4g080787	33.333	198	110	7	19	195	18	214	1.88e-11	64.7
MS.gene53646.t1	MTR_2g005990	29.952	207	112	7	20	200	6	205	2.24e-11	64.3
MS.gene53646.t1	MTR_4g080590	27.072	181	128	2	20	196	23	203	2.77e-11	63.9
MS.gene53646.t1	MTR_4g093690	31.343	201	104	7	16	195	14	201	2.97e-11	63.2
MS.gene53646.t1	MTR_4g080590	27.222	180	127	2	20	195	23	202	3.21e-11	63.9
MS.gene53646.t1	MTR_8g467800	31.980	197	119	6	13	196	10	204	3.43e-11	63.9
MS.gene53646.t1	MTR_2g101950	27.326	172	116	4	12	176	72	241	5.75e-11	62.8
MS.gene53646.t1	MTR_1g095750	43.210	81	44	1	20	98	46	126	6.52e-11	59.7
MS.gene53646.t1	MTR_2g101950	27.326	172	116	4	12	176	30	199	7.58e-11	62.8
MS.gene53646.t1	MTR_2g008310	28.333	240	160	5	20	250	2	238	8.44e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene53646.t1	AT3G50710	40.415	193	89	9	20	195	2	185	4.72e-19	87.0
MS.gene53646.t1	AT5G41840	33.641	217	115	7	20	211	14	226	1.56e-17	82.8
MS.gene53646.t1	AT3G59200	32.381	210	121	7	20	215	7	209	3.37e-17	81.3
MS.gene53646.t1	AT4G14103	40.642	187	98	7	20	195	8	192	5.82e-17	80.5
MS.gene53646.t1	AT4G14103	40.642	187	98	7	20	195	8	192	5.82e-17	80.5
MS.gene53646.t1	AT4G14103	40.642	187	98	7	20	195	8	192	8.05e-17	80.5
MS.gene53646.t1	AT3G59200	32.381	210	121	7	20	215	7	209	1.59e-16	80.1
MS.gene53646.t1	AT5G41830	31.527	203	117	5	20	201	13	214	1.82e-16	79.7
MS.gene53646.t1	AT4G26340	39.247	186	97	7	20	195	2	181	2.39e-16	79.0
MS.gene53646.t1	AT1G16930	30.435	207	129	4	6	205	1	199	3.36e-16	79.0
MS.gene53646.t1	AT1G16930	30.435	207	129	4	6	205	1	199	3.36e-16	79.0
MS.gene53646.t1	AT1G16930	30.435	207	129	4	6	205	1	199	3.36e-16	79.0
MS.gene53646.t1	AT3G59240	32.487	197	112	7	20	200	8	199	2.09e-15	76.6
MS.gene53646.t1	AT4G00315	35.484	186	109	6	20	195	2	186	3.03e-15	75.9
MS.gene53646.t1	AT5G18770	32.292	192	120	5	14	196	18	208	3.85e-15	75.5
MS.gene53646.t1	AT5G18770	32.620	187	116	5	19	196	23	208	5.21e-15	75.5
MS.gene53646.t1	AT1G55660	36.898	187	105	6	20	195	53	237	5.22e-15	74.7
MS.gene53646.t1	AT5G53635	33.696	184	110	5	21	196	1	180	9.90e-15	74.3
MS.gene53646.t1	AT1G55660	36.898	187	105	6	20	195	53	237	1.19e-14	74.3
MS.gene53646.t1	AT4G00320	29.644	253	139	9	20	247	13	251	1.32e-14	74.3
MS.gene53646.t1	AT4G26350	37.368	190	97	8	20	196	2	182	1.76e-14	73.6
MS.gene53646.t1	AT4G00160	33.516	182	115	4	20	195	16	197	2.45e-14	73.2
MS.gene53646.t1	AT5G56370	39.011	182	98	8	20	193	2	178	2.53e-14	73.2
MS.gene53646.t1	AT5G56370	39.011	182	98	8	20	193	2	178	2.53e-14	73.2
MS.gene53646.t1	AT5G56370	39.011	182	98	8	20	193	2	178	2.64e-14	72.4
MS.gene53646.t1	AT4G10400	34.807	181	113	4	20	195	2	182	5.45e-14	72.0
MS.gene53646.t1	AT4G10400	34.807	181	113	4	20	195	2	182	5.45e-14	72.0
MS.gene53646.t1	AT4G10400	34.807	181	113	4	20	195	2	182	5.45e-14	72.0
MS.gene53646.t1	AT5G22720	31.522	184	117	4	19	195	22	203	6.61e-14	72.0
MS.gene53646.t1	AT4G09920	34.254	181	114	4	20	195	2	182	8.81e-14	70.5
MS.gene53646.t1	AT4G09920	34.254	181	114	4	20	195	2	182	8.81e-14	70.5
MS.gene53646.t1	AT4G09920	34.254	181	114	4	20	195	2	182	8.81e-14	70.5
MS.gene53646.t1	AT4G14096	35.870	184	109	4	20	195	8	190	9.06e-14	71.6
MS.gene53646.t1	AT4G14096	35.870	184	109	4	20	195	8	190	9.06e-14	71.6
MS.gene53646.t1	AT1G69630	35.519	183	109	5	20	195	18	198	1.28e-13	71.2
MS.gene53646.t1	AT4G09920	34.054	185	109	6	20	195	2	182	1.35e-13	70.5
MS.gene53646.t1	AT4G09920	34.054	185	109	6	20	195	2	182	1.35e-13	70.5
MS.gene53646.t1	AT4G13960	34.031	191	105	8	20	195	2	186	2.78e-13	70.1
MS.gene53646.t1	AT4G13960	34.031	191	105	8	20	195	2	186	2.78e-13	70.1
MS.gene53646.t1	AT1G66320	28.947	190	133	2	8	195	18	207	4.79e-13	69.3
MS.gene53646.t1	AT1G51370	32.222	180	115	4	18	195	17	191	6.31e-13	68.9
MS.gene53646.t1	AT1G51370	32.222	180	115	4	18	195	17	191	6.34e-13	68.9
MS.gene53646.t1	AT4G13965	34.066	182	113	4	18	195	8	186	6.97e-13	68.9
MS.gene53646.t1	AT5G18780	32.796	186	110	5	19	196	10	188	7.56e-13	68.6
MS.gene53646.t1	AT5G18780	32.796	186	110	5	19	196	10	188	7.56e-13	68.6
MS.gene53646.t1	AT1G13780	34.031	191	111	5	20	195	10	200	7.86e-13	68.2
MS.gene53646.t1	AT1G13780	34.031	191	111	5	20	195	10	200	7.87e-13	68.9
MS.gene53646.t1	AT3G52680	34.759	187	105	6	20	195	21	201	8.46e-13	68.6
MS.gene53646.t1	AT3G52680	34.759	187	105	6	20	195	21	201	8.47e-13	68.6
MS.gene53646.t1	AT4G15060	35.979	189	109	5	17	195	23	209	8.60e-13	68.6
MS.gene53646.t1	AT1G51370	32.222	180	115	4	18	195	17	191	9.84e-13	68.2
MS.gene53646.t1	AT5G18780	32.796	186	110	5	19	196	10	188	1.43e-12	68.2
MS.gene53646.t1	AT5G18780	32.796	186	110	5	19	196	10	188	1.43e-12	68.2
MS.gene53646.t1	AT5G53640	28.729	181	120	3	19	195	21	196	1.59e-12	66.2
MS.gene53646.t1	AT3G59190	30.734	218	130	7	20	220	12	225	1.62e-12	67.8
MS.gene53646.t1	AT5G56380	35.263	190	106	5	20	195	2	188	1.70e-12	67.8
MS.gene53646.t1	AT5G56380	35.263	190	106	5	20	195	2	188	1.70e-12	67.8
MS.gene53646.t1	AT5G44490	28.108	185	124	3	19	195	16	199	2.24e-12	67.4
MS.gene53646.t1	AT5G44490	28.108	185	124	3	19	195	16	199	2.65e-12	67.4
MS.gene53646.t1	AT3G59190	30.734	218	130	7	20	220	12	225	3.09e-12	67.0
MS.gene53646.t1	AT5G22670	33.702	181	111	4	20	195	11	187	3.16e-12	67.0
MS.gene53646.t1	AT5G56420	34.239	184	109	6	20	195	6	185	3.47e-12	66.6
MS.gene53646.t1	AT5G56420	34.239	184	109	6	20	195	6	185	3.47e-12	66.6
MS.gene53646.t1	AT5G56420	34.239	184	109	6	20	195	6	185	3.47e-12	66.6
MS.gene53646.t1	AT1G80470	31.250	192	109	6	18	195	13	195	3.55e-12	67.0
MS.gene53646.t1	AT5G41630	31.282	195	114	6	20	195	12	205	3.63e-12	66.6
MS.gene53646.t1	AT4G15060	35.638	188	109	5	18	195	170	355	3.66e-12	67.0
MS.gene53646.t1	AT5G22610	31.720	186	118	3	19	195	17	202	4.78e-12	66.6
MS.gene53646.t1	AT5G22610	31.720	186	118	3	19	195	17	202	5.31e-12	66.2
MS.gene53646.t1	AT5G56820	35.047	214	120	8	1	209	1	200	5.35e-12	66.2
MS.gene53646.t1	AT3G49150	31.217	189	114	5	20	195	16	201	5.45e-12	66.2
MS.gene53646.t1	AT5G25850	32.203	177	115	3	22	196	22	195	1.17e-11	65.5
MS.gene53646.t1	AT4G22280	31.667	180	118	4	20	195	2	180	1.58e-11	64.7
MS.gene53646.t1	AT4G22280	31.667	180	118	4	20	195	2	180	1.60e-11	64.3
MS.gene53646.t1	AT3G59230	30.901	233	122	10	20	224	12	233	1.68e-11	64.7
MS.gene53646.t1	AT3G58860	32.828	198	110	9	15	195	2	193	1.89e-11	64.7
MS.gene53646.t1	AT3G58880	31.250	192	112	5	20	195	3	190	2.41e-11	64.3
MS.gene53646.t1	AT5G22660	30.500	200	134	3	19	215	12	209	3.71e-11	63.2
MS.gene53646.t1	AT5G27750	31.959	194	109	6	20	195	5	193	3.81e-11	63.5
MS.gene53646.t1	AT5G22660	32.222	180	117	3	19	195	12	189	4.04e-11	63.5
MS.gene53646.t1	AT5G56690	29.891	184	119	3	22	195	4	187	4.72e-11	63.2
MS.gene53646.t1	AT5G27750	31.959	194	109	6	20	195	5	193	4.77e-11	63.2
MS.gene53646.t1	AT3G26922	32.065	184	116	5	18	195	12	192	7.11e-11	62.4
MS.gene53646.t1	AT3G26922	32.065	184	116	5	18	195	12	192	7.11e-11	62.4

Find 66 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAGAGAATTTGCGGCATTTA+AGG	0.224341	1.1:-29815538	None:intergenic
TTCAAACAGGTGGGAGCGTT+TGG	0.303306	1.1:-29815458	None:intergenic
TTGCACCGTCAATAAAAGTT+TGG	0.331242	1.1:-29815571	None:intergenic
TTGATAGTTAGAACGATAGA+AGG	0.361470	1.1:-29815656	None:intergenic
ATAAGTATTCTTTGTTTGAT+TGG	0.363975	1.1:+29815945	MS.gene53646:CDS
GATGACAATAATTTGAAAAC+TGG	0.376416	1.1:-29816028	None:intergenic
TTGTTTCCAGCTCCTCTAGA+AGG	0.378519	1.1:-29815820	None:intergenic
CATGTGAAGTGCTTTGAGTA+AGG	0.409063	1.1:-29815741	None:intergenic
CATCTCTGGAAACTTCTGTC+TGG	0.415210	1.1:+29815791	MS.gene53646:CDS
TTAAAAGTCATGAACATCTC+TGG	0.419732	1.1:+29815777	MS.gene53646:CDS
GTTGTAGGGGCACCACTTGT+AGG	0.429661	1.1:-29815991	None:intergenic
TTTAAGGTTTAATGAGAGGA+TGG	0.435701	1.1:-29815522	None:intergenic
GCAGAAGACATACCAGTTGT+AGG	0.453423	1.1:-29816006	None:intergenic
ATGTTACGCAGTTCAATTTG+AGG	0.457591	1.1:-29815691	None:intergenic
ATCTCTGGAAACTTCTGTCT+GGG	0.458575	1.1:+29815792	MS.gene53646:CDS
AATGTTAGCTTTCACCAACT+TGG	0.461078	1.1:-29815918	None:intergenic
GTGAGTTGTGAGAGGAAGAG+TGG	0.462806	1.1:-29815410	None:intergenic
TTGAATGCCCTAGCCTCTGC+GGG	0.466072	1.1:-29815256	None:intergenic
GGAGTTGAAGAATTTCAAAC+AGG	0.467925	1.1:-29815471	None:intergenic
ACAAGTGGTGCCCCTACAAC+TGG	0.473669	1.1:+29815994	MS.gene53646:CDS
TCAATGTCCCCGCAGAGGCT+AGG	0.479314	1.1:+29815248	None:intergenic
CATTCCTAAAATAAAACGGC+GGG	0.479478	1.1:-29816118	None:intergenic
CAATGTCCCCGCAGAGGCTA+GGG	0.494778	1.1:+29815249	None:intergenic
CAGAAGACATACCAGTTGTA+GGG	0.495964	1.1:-29816005	None:intergenic
AGGAAAGAATGTGATGAAGA+AGG	0.499381	1.1:-29815334	None:intergenic
CTAACATTCCTAAAATAAAA+CGG	0.502059	1.1:-29816122	None:intergenic
GTCTTTGTCATCGAAGTTGA+GGG	0.504540	1.1:-29815432	None:intergenic
GGTTCCCCTTCTAGAGGAGC+TGG	0.505196	1.1:+29815814	MS.gene53646:CDS
GGTGTCTTTCGTCGGAAGGA+AGG	0.508560	1.1:-29815354	None:intergenic
TTTCACGCCTAGAGAATTTG+CGG	0.517784	1.1:-29815547	None:intergenic
GTGACGGTGGTGTCTTTCGT+CGG	0.519533	1.1:-29815362	None:intergenic
GTTTCCATCTCTTTGAGAGA+AGG	0.521702	1.1:-29815388	None:intergenic
GTTGAAGAATTTCAAACAGG+TGG	0.523380	1.1:-29815468	None:intergenic
TTAAATGCCGCAAATTCTCT+AGG	0.523521	1.1:+29815540	MS.gene53646:CDS
TGTTTCCAGCTCCTCTAGAA+GGG	0.524428	1.1:-29815819	None:intergenic
CAAATTGAACTGCGTAACAT+TGG	0.528944	1.1:+29815694	MS.gene53646:CDS
CAAGCCTTCTCTCAAAGAGA+TGG	0.529722	1.1:+29815384	MS.gene53646:CDS
ATGTGAAGTGCTTTGAGTAA+GGG	0.530631	1.1:-29815740	None:intergenic
AGTCTTTGTCATCGAAGTTG+AGG	0.539917	1.1:-29815433	None:intergenic
CAACACCGACAGTCTCGATA+AGG	0.540842	1.1:-29815863	None:intergenic
GTCTGGGGTTCCCCTTCTAG+AGG	0.540939	1.1:+29815808	MS.gene53646:CDS
AGTTGAGGGTGAGTTGTGAG+AGG	0.542484	1.1:-29815418	None:intergenic
GGCATTTAAGGTTTAATGAG+AGG	0.547702	1.1:-29815526	None:intergenic
AACATTGGACGATGTTCCAC+AGG	0.548895	1.1:+29815709	MS.gene53646:CDS
CGGTGGTGTCTTTCGTCGGA+AGG	0.559236	1.1:-29815358	None:intergenic
TTAAGGTTTAATGAGAGGAT+GGG	0.564482	1.1:-29815521	None:intergenic
CTTACTCAAAGCACTTCACA+TGG	0.569756	1.1:+29815742	MS.gene53646:CDS
GATAGAAGGCAACGCTGAGT+AGG	0.575361	1.1:-29815642	None:intergenic
CTTTGAGAGAAGGCTTGTGA+CGG	0.583107	1.1:-29815378	None:intergenic
GAAGCATCTGCGCCTACAAG+TGG	0.590871	1.1:+29815979	MS.gene53646:CDS
GTTTCCAGCTCCTCTAGAAG+GGG	0.592605	1.1:-29815818	None:intergenic
TTGAAGAATTTCAAACAGGT+GGG	0.592854	1.1:-29815467	None:intergenic
GTTCAATTTGAGGACAGACA+AGG	0.611188	1.1:-29815681	None:intergenic
CGACATAATCAGTGCACTGT+CGG	0.615923	1.1:+29815307	MS.gene53646:CDS
TGAGAGAAGGCTTGTGACGG+TGG	0.634102	1.1:-29815375	None:intergenic
GTTGAATGCCCTAGCCTCTG+CGG	0.644720	1.1:-29815257	None:intergenic
ATTCGTCGAGATCGATGCTG+AGG	0.646132	1.1:-29815619	None:intergenic
TTCGTCGAGATCGATGCTGA+GGG	0.650567	1.1:-29815618	None:intergenic
AGAAGACATACCAGTTGTAG+GGG	0.656588	1.1:-29816004	None:intergenic
TCTCTGGAAACTTCTGTCTG+GGG	0.667742	1.1:+29815793	MS.gene53646:CDS
AAACACCTTATCGAGACTGT+CGG	0.675204	1.1:+29815858	MS.gene53646:CDS
ACATCTCAATGTCCCCGCAG+AGG	0.678052	1.1:+29815243	None:intergenic
ACATTCCTAAAATAAAACGG+CGG	0.679244	1.1:-29816119	None:intergenic
ATTCCTAAAATAAAACGGCG+GGG	0.682642	1.1:-29816117	None:intergenic
AGTAAGGGAAGATGAACCTG+TGG	0.698887	1.1:-29815725	None:intergenic
TGAATGCCCTAGCCTCTGCG+GGG	0.750021	1.1:-29815255	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAAGTATTCTTTGTTTGAT+TGG	+	chr1.1:29815945-29815964	MS.gene53646:CDS	20.0%
!	GATGACAATAATTTGAAAAC+TGG	-	chr1.1:29816031-29816050	None:intergenic	25.0%
!!	GAAATCCAAACTTTTATTGA+CGG	+	chr1.1:29815566-29815585	MS.gene53646:CDS	25.0%
!!!	TGCAGTGATTTTTTTCTTAA+TGG	-	chr1.1:29816077-29816096	None:intergenic	25.0%
	AAAAAAATCACTGCACATGT+GGG	+	chr1.1:29816082-29816101	MS.gene53646:CDS	30.0%
	TTAAAAGTCATGAACATCTC+TGG	+	chr1.1:29815777-29815796	MS.gene53646:CDS	30.0%
	TTAAGGTTTAATGAGAGGAT+GGG	-	chr1.1:29815524-29815543	None:intergenic	30.0%
	TTGAAGAATTTCAAACAGGT+GGG	-	chr1.1:29815470-29815489	None:intergenic	30.0%
!	TTGATAGTTAGAACGATAGA+AGG	-	chr1.1:29815659-29815678	None:intergenic	30.0%
!	TTTAAGGTTTAATGAGAGGA+TGG	-	chr1.1:29815525-29815544	None:intergenic	30.0%
	AGGAAAGAATGTGATGAAGA+AGG	-	chr1.1:29815337-29815356	None:intergenic	35.0%
	ATGTTACGCAGTTCAATTTG+AGG	-	chr1.1:29815694-29815713	None:intergenic	35.0%
	CAAATTGAACTGCGTAACAT+TGG	+	chr1.1:29815694-29815713	MS.gene53646:CDS	35.0%
	GAAAAAAATCACTGCACATG+TGG	+	chr1.1:29816081-29816100	MS.gene53646:CDS	35.0%
	GGAGTTGAAGAATTTCAAAC+AGG	-	chr1.1:29815474-29815493	None:intergenic	35.0%
	GTTGAAGAATTTCAAACAGG+TGG	-	chr1.1:29815471-29815490	None:intergenic	35.0%
	TAGAGAATTTGCGGCATTTA+AGG	-	chr1.1:29815541-29815560	None:intergenic	35.0%
	TTAAATGCCGCAAATTCTCT+AGG	+	chr1.1:29815540-29815559	MS.gene53646:CDS	35.0%
	TTGCACCGTCAATAAAAGTT+TGG	-	chr1.1:29815574-29815593	None:intergenic	35.0%
!	ATGTGAAGTGCTTTGAGTAA+GGG	-	chr1.1:29815743-29815762	None:intergenic	35.0%
!	GGCATTTAAGGTTTAATGAG+AGG	-	chr1.1:29815529-29815548	None:intergenic	35.0%
!!	AATGTTAGCTTTCACCAACT+TGG	-	chr1.1:29815921-29815940	None:intergenic	35.0%
!!!	TGAGGGTTTTAAGGTTTGTA+AGG	-	chr1.1:29815604-29815623	None:intergenic	35.0%
	AAACACCTTATCGAGACTGT+CGG	+	chr1.1:29815858-29815877	MS.gene53646:CDS	40.0%
	AGAAGACATACCAGTTGTAG+GGG	-	chr1.1:29816007-29816026	None:intergenic	40.0%
	AGTCTTTGTCATCGAAGTTG+AGG	-	chr1.1:29815436-29815455	None:intergenic	40.0%
	CAGAAGACATACCAGTTGTA+GGG	-	chr1.1:29816008-29816027	None:intergenic	40.0%
	GTCTTTGTCATCGAAGTTGA+GGG	-	chr1.1:29815435-29815454	None:intergenic	40.0%
	GTTCAATTTGAGGACAGACA+AGG	-	chr1.1:29815684-29815703	None:intergenic	40.0%
	TTTCACGCCTAGAGAATTTG+CGG	-	chr1.1:29815550-29815569	None:intergenic	40.0%
!	ATCTCTGGAAACTTCTGTCT+GGG	+	chr1.1:29815792-29815811	MS.gene53646:CDS	40.0%
!	CATGTGAAGTGCTTTGAGTA+AGG	-	chr1.1:29815744-29815763	None:intergenic	40.0%
!	CTTACTCAAAGCACTTCACA+TGG	+	chr1.1:29815742-29815761	MS.gene53646:CDS	40.0%
!	GTTTCCATCTCTTTGAGAGA+AGG	-	chr1.1:29815391-29815410	None:intergenic	40.0%
!	TGTTGCATGCTTTTCCAAGT+TGG	+	chr1.1:29815904-29815923	MS.gene53646:CDS	40.0%
	AACATTGGACGATGTTCCAC+AGG	+	chr1.1:29815709-29815728	MS.gene53646:CDS	45.0%
	AGTAAGGGAAGATGAACCTG+TGG	-	chr1.1:29815728-29815747	None:intergenic	45.0%
	CAAGCCTTCTCTCAAAGAGA+TGG	+	chr1.1:29815384-29815403	MS.gene53646:CDS	45.0%
	CGACATAATCAGTGCACTGT+CGG	+	chr1.1:29815307-29815326	MS.gene53646:CDS	45.0%
	GCAGAAGACATACCAGTTGT+AGG	-	chr1.1:29816009-29816028	None:intergenic	45.0%
	TTGTTTCCAGCTCCTCTAGA+AGG	-	chr1.1:29815823-29815842	None:intergenic	45.0%
!	CATCTCTGGAAACTTCTGTC+TGG	+	chr1.1:29815791-29815810	MS.gene53646:CDS	45.0%
!	CTTTGAGAGAAGGCTTGTGA+CGG	-	chr1.1:29815381-29815400	None:intergenic	45.0%
!	GATCGATGCTGAGGGTTTTA+AGG	-	chr1.1:29815613-29815632	None:intergenic	45.0%
!	TCTCTGGAAACTTCTGTCTG+GGG	+	chr1.1:29815793-29815812	MS.gene53646:CDS	45.0%
!	TGTTTCCAGCTCCTCTAGAA+GGG	-	chr1.1:29815822-29815841	None:intergenic	45.0%
	AGTTGAGGGTGAGTTGTGAG+AGG	-	chr1.1:29815421-29815440	None:intergenic	50.0%
	ATTCGTCGAGATCGATGCTG+AGG	-	chr1.1:29815622-29815641	None:intergenic	50.0%
	CAACACCGACAGTCTCGATA+AGG	-	chr1.1:29815866-29815885	None:intergenic	50.0%
	GATAGAAGGCAACGCTGAGT+AGG	-	chr1.1:29815645-29815664	None:intergenic	50.0%
	GTGAGTTGTGAGAGGAAGAG+TGG	-	chr1.1:29815413-29815432	None:intergenic	50.0%
	TTCGTCGAGATCGATGCTGA+GGG	-	chr1.1:29815621-29815640	None:intergenic	50.0%
!	GGATGGGTACAGCGTTTTCT+CGG	-	chr1.1:29815508-29815527	None:intergenic	50.0%
!	GTTTCCAGCTCCTCTAGAAG+GGG	-	chr1.1:29815821-29815840	None:intergenic	50.0%
!!	TTCAAACAGGTGGGAGCGTT+TGG	-	chr1.1:29815461-29815480	None:intergenic	50.0%
!!!	GTTTTCTCGGTTGGTGATGC+AGG	-	chr1.1:29815495-29815514	None:intergenic	50.0%
	ACAAGTGGTGCCCCTACAAC+TGG	+	chr1.1:29815994-29816013	MS.gene53646:CDS	55.0%
	GGTGTCTTTCGTCGGAAGGA+AGG	-	chr1.1:29815357-29815376	None:intergenic	55.0%
	GTGACGGTGGTGTCTTTCGT+CGG	-	chr1.1:29815365-29815384	None:intergenic	55.0%
	GTTGAATGCCCTAGCCTCTG+CGG	-	chr1.1:29815260-29815279	None:intergenic	55.0%
	TGAGAGAAGGCTTGTGACGG+TGG	-	chr1.1:29815378-29815397	None:intergenic	55.0%
	TTGAATGCCCTAGCCTCTGC+GGG	-	chr1.1:29815259-29815278	None:intergenic	55.0%
!	GAAGCATCTGCGCCTACAAG+TGG	+	chr1.1:29815979-29815998	MS.gene53646:CDS	55.0%
!	GGGTACAGCGTTTTCTCGGT+TGG	-	chr1.1:29815504-29815523	None:intergenic	55.0%
!!	GTTGTAGGGGCACCACTTGT+AGG	-	chr1.1:29815994-29816013	None:intergenic	55.0%
	CGGTGGTGTCTTTCGTCGGA+AGG	-	chr1.1:29815361-29815380	None:intergenic	60.0%
	TGAATGCCCTAGCCTCTGCG+GGG	-	chr1.1:29815258-29815277	None:intergenic	60.0%
!	GGTTCCCCTTCTAGAGGAGC+TGG	+	chr1.1:29815814-29815833	MS.gene53646:CDS	60.0%
!	GTCTGGGGTTCCCCTTCTAG+AGG	+	chr1.1:29815808-29815827	MS.gene53646:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	29815251	29816135	29815251	ID=MS.gene53646
chr1.1	mRNA	29815251	29816135	29815251	ID=MS.gene53646.t1;Parent=MS.gene53646
chr1.1	exon	29815251	29816135	29815251	ID=MS.gene53646.t1.exon1;Parent=MS.gene53646.t1
chr1.1	CDS	29815251	29816135	29815251	ID=cds.MS.gene53646.t1;Parent=MS.gene53646.t1

Gene Sequence

>MS.gene53646

ATGTCCCCGCAGAGGCTAGGGCATTCAACTCTAGAAGAAGAAGAAGAAGAAGACGACGACATAATCAGTGCACTGTCGGATCTCCTTCTTCATCACATTCTTTCCTTCCTTCCGACGAAAGACACCACCGTCACAAGCCTTCTCTCAAAGAGATGGAAACCACTCTTCCTCTCACAACTCACCCTCAACTTCGATGACAAAGACTTTCCAAACGCTCCCACCTGTTTGAAATTCTTCAACTCCTGCATCACCAACCGAGAAAACGCTGTACCCATCCTCTCATTAAACCTTAAATGCCGCAAATTCTCTAGGCGTGAAATCCAAACTTTTATTGACGGTGCAATAGTAAACCTTACAAACCTTAAAACCCTCAGCATCGATCTCGACGAATCCTACTCAGCGTTGCCTTCTATCGTTCTAACTATCAAAACCTTGTCTGTCCTCAAATTGAACTGCGTAACATTGGACGATGTTCCACAGGTTCATCTTCCCTTACTCAAAGCACTTCACATGGAATATGTCACTTTTAAAAGTCATGAACATCTCTGGAAACTTCTGTCTGGGGTTCCCCTTCTAGAGGAGCTGGAAACAAAGCATTTAATCGTAAAAACACCTTATCGAGACTGTCGGTGTTGTTCACATTCACAAAGACGTGTTGCATGCTTTTCCAAGTTGGTGAAAGCTAACATTCGTGATAAGTATTCTTTGTTTGATTGGTTTCATAACGTGAAGCATCTGCGCCTACAAGTGGTGCCCCTACAACTGGTATGTCTTCTGCCAGTTTTCAAATTATTGTCATCACTTGTTGTTTTAGTTATTGTCACCATTAAGAAAAAAATCACTGCACATGTGGGAGAATTCTTGATCCCCGCCGTTTTATTTTAG

Protein sequence

>MS.gene53646.t1

MSPQRLGHSTLEEEEEEDDDIISALSDLLLHHILSFLPTKDTTVTSLLSKRWKPLFLSQLTLNFDDKDFPNAPTCLKFFNSCITNRENAVPILSLNLKCRKFSRREIQTFIDGAIVNLTNLKTLSIDLDESYSALPSIVLTIKTLSVLKLNCVTLDDVPQVHLPLLKALHMEYVTFKSHEHLWKLLSGVPLLEELETKHLIVKTPYRDCRCCSHSQRRVACFSKLVKANIRDKYSLFDWFHNVKHLRLQVVPLQLVCLLPVFKLLSSLVVLVIVTIKKKITAHVGEFLIPAVLF