AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61254


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61254.t1 MTR_4g099180 96.690 423 8 1 1 417 3 425 0.0 848
MS.gene61254.t1 MTR_4g099180 95.105 286 8 1 1 280 3 288 0.0 557
MS.gene61254.t1 MTR_4g099180 95.439 285 7 1 1 279 3 287 0.0 556
MS.gene61254.t1 MTR_7g451440 56.637 452 148 8 3 415 2 444 4.91e-154 443
MS.gene61254.t1 MTR_8g007500 68.340 259 81 1 160 417 193 451 2.45e-117 350
MS.gene61254.t1 MTR_3g072650 51.786 336 130 6 84 410 109 421 1.47e-101 308
MS.gene61254.t1 MTR_5g058920 53.079 341 113 7 99 410 111 433 4.36e-101 308
MS.gene61254.t1 MTR_3g072650 54.478 268 100 5 84 342 109 363 8.92e-97 295
MS.gene61254.t1 MTR_8g080860 37.500 200 102 2 161 337 13 212 1.10e-30 119
MS.gene61254.t1 MTR_8g080860 33.168 202 112 1 162 340 37 238 6.12e-27 109
MS.gene61254.t1 MTR_8g080860 37.654 162 101 0 160 321 104 265 4.68e-26 107
MS.gene61254.t1 MTR_8g080860 35.227 176 114 0 164 339 85 260 1.13e-25 105
MS.gene61254.t1 MTR_8g080860 32.824 131 88 0 210 340 16 146 6.38e-17 80.9
MS.gene61254.t1 MTR_8g080860 37.500 200 102 2 161 337 17 216 1.15e-30 119
MS.gene61254.t1 MTR_8g080860 33.168 202 112 1 162 340 41 242 6.24e-27 109
MS.gene61254.t1 MTR_8g080860 37.654 162 101 0 160 321 108 269 4.86e-26 107
MS.gene61254.t1 MTR_8g080860 35.227 176 114 0 164 339 89 264 1.19e-25 105
MS.gene61254.t1 MTR_8g080860 32.824 131 88 0 210 340 20 150 6.80e-17 80.9
MS.gene61254.t1 MTR_8g088930 35.955 178 114 0 163 340 12 189 2.94e-29 120
MS.gene61254.t1 MTR_8g088930 35.036 137 89 0 204 340 7 143 2.80e-19 90.9
MS.gene61254.t1 MTR_8g088930 36.364 143 83 2 140 277 56 195 1.25e-14 76.3
MS.gene61254.t1 MTR_8g088930 35.955 178 114 0 163 340 12 189 2.99e-29 120
MS.gene61254.t1 MTR_8g088930 35.036 137 89 0 204 340 7 143 2.88e-19 90.9
MS.gene61254.t1 MTR_8g088930 36.364 143 83 2 140 277 56 195 1.29e-14 76.3
MS.gene61254.t1 MTR_8g088930 35.955 178 114 0 163 340 12 189 3.83e-29 120
MS.gene61254.t1 MTR_8g088930 35.036 137 89 0 204 340 7 143 3.90e-19 90.1
MS.gene61254.t1 MTR_8g088930 36.364 143 83 2 140 277 56 195 1.47e-14 76.3
MS.gene61254.t1 MTR_8g088930 35.955 178 114 0 163 340 12 189 3.86e-29 120
MS.gene61254.t1 MTR_8g088930 35.036 137 89 0 204 340 7 143 4.07e-19 90.1
MS.gene61254.t1 MTR_8g088930 36.364 143 83 2 140 277 56 195 1.45e-14 76.3
MS.gene61254.t1 MTR_8g092090 34.653 202 101 2 163 333 8 209 5.12e-27 108
MS.gene61254.t1 MTR_8g092090 36.478 159 101 0 152 310 74 232 3.83e-23 97.8
MS.gene61254.t1 MTR_8g092090 30.178 169 87 2 203 340 2 170 7.89e-13 68.6
MS.gene61254.t1 MTR_4g107460 33.333 210 116 2 154 339 22 231 2.02e-26 108
MS.gene61254.t1 MTR_4g107460 34.270 178 116 1 164 340 9 186 1.49e-22 98.2
MS.gene61254.t1 MTR_4g107460 31.148 183 123 1 152 331 90 272 1.91e-19 89.4
MS.gene61254.t1 MTR_1g050740 33.702 181 120 0 161 341 58 238 4.99e-26 111
MS.gene61254.t1 MTR_1g050740 32.609 184 121 1 162 345 82 262 4.89e-20 93.2
MS.gene61254.t1 MTR_3g073100 35.838 173 110 1 165 336 58 230 2.64e-25 108
MS.gene61254.t1 MTR_3g073100 37.931 116 72 0 225 340 73 188 3.51e-18 87.4
MS.gene61254.t1 MTR_8g039100 27.668 253 165 3 161 395 50 302 6.40e-25 107
MS.gene61254.t1 MTR_8g039100 35.862 145 92 1 197 340 39 183 3.21e-18 87.4
MS.gene61254.t1 MTR_5g459450 35.928 167 107 0 161 327 66 232 1.13e-24 107
MS.gene61254.t1 MTR_5g459450 36.719 128 81 0 212 339 71 198 5.83e-19 89.7
MS.gene61254.t1 MTR_5g459450 33.019 106 71 0 235 340 71 176 4.64e-12 68.6
MS.gene61254.t1 MTR_3g097260 37.209 172 108 0 165 336 56 227 1.44e-24 106
MS.gene61254.t1 MTR_3g097260 34.109 129 85 0 163 291 100 228 4.17e-15 77.8
MS.gene61254.t1 MTR_3g097260 36.719 128 81 0 212 339 57 184 2.77e-12 68.9
MS.gene61254.t1 MTR_7g089950 32.370 173 117 0 161 333 68 240 7.36e-24 104
MS.gene61254.t1 MTR_8g095240 33.163 196 113 4 163 343 118 310 5.23e-22 97.8
MS.gene61254.t1 MTR_8g095240 30.303 231 118 4 153 340 30 260 5.75e-22 97.8
MS.gene61254.t1 MTR_8g095240 34.706 170 108 2 160 326 171 340 6.98e-20 91.7
MS.gene61254.t1 MTR_8g095240 31.383 188 119 1 161 338 1 188 7.18e-20 91.7
MS.gene61254.t1 MTR_3g014650 32.432 185 109 2 161 345 86 254 1.26e-21 97.8
MS.gene61254.t1 MTR_3g014650 27.545 167 118 1 156 322 95 258 3.93e-14 74.7
MS.gene61254.t1 MTR_1g062740 30.049 203 134 2 162 356 72 274 4.45e-21 96.3
MS.gene61254.t1 MTR_1g062740 31.818 176 120 0 165 340 52 227 2.76e-20 94.0
MS.gene61254.t1 MTR_1g062740 29.592 196 131 3 151 339 8 203 3.34e-18 87.4
MS.gene61254.t1 MTR_8g095170 34.568 162 105 1 164 324 30 191 4.59e-21 95.9
MS.gene61254.t1 MTR_8g095170 39.130 115 70 0 225 339 46 160 2.70e-17 84.7
MS.gene61254.t1 MTR_8g095170 34.568 162 105 1 164 324 30 191 8.35e-21 95.1
MS.gene61254.t1 MTR_8g095170 39.130 115 70 0 225 339 46 160 4.59e-17 83.6
MS.gene61254.t1 MTR_8g080340 40.336 119 71 0 203 321 35 153 3.83e-20 87.4
MS.gene61254.t1 MTR_8g080340 34.959 123 80 0 215 337 24 146 2.34e-16 77.0
MS.gene61254.t1 MTR_8g080310 35.556 135 87 0 206 340 6 140 2.94e-19 84.7
MS.gene61254.t1 MTR_8g080310 31.579 152 104 0 160 311 6 157 2.03e-16 76.6
MS.gene61254.t1 MTR_6g043150 32.804 189 104 1 164 329 79 267 1.44e-18 86.7
MS.gene61254.t1 MTR_6g043150 35.227 176 112 2 160 334 6 180 4.91e-18 85.1
MS.gene61254.t1 MTR_6g043150 36.306 157 100 0 162 318 169 325 1.99e-17 83.2
MS.gene61254.t1 MTR_6g043150 34.074 135 89 0 204 338 4 138 2.46e-15 77.0
MS.gene61254.t1 MTR_2g078470 31.217 189 107 1 164 329 148 336 3.00e-18 86.3
MS.gene61254.t1 MTR_2g078470 32.386 176 119 0 164 339 79 254 1.60e-16 80.9
MS.gene61254.t1 MTR_2g078470 32.143 168 114 0 162 329 100 267 4.29e-16 79.7
MS.gene61254.t1 MTR_2g078470 30.729 192 110 1 161 329 7 198 5.50e-16 79.3
MS.gene61254.t1 MTR_2g078470 34.722 144 94 0 164 307 217 360 3.10e-13 71.2
MS.gene61254.t1 MTR_5g010840 32.955 176 110 1 164 339 181 348 1.02e-16 81.6
MS.gene61254.t1 MTR_5g010840 30.939 181 110 2 162 327 133 313 5.85e-15 76.6
MS.gene61254.t1 MTR_5g010840 32.911 158 105 1 153 309 207 364 2.87e-13 71.2
MS.gene61254.t1 MTR_5g010840 30.303 165 107 1 162 326 202 358 3.09e-12 68.2
MS.gene61254.t1 MTR_8g080350 36.441 118 73 1 192 309 87 202 3.27e-13 71.2
MS.gene61254.t1 MTR_8g080350 24.436 266 135 6 154 363 116 371 1.36e-12 69.3
MS.gene61254.t1 MTR_8g080350 34.615 130 82 2 215 343 87 214 1.52e-12 68.9
MS.gene61254.t1 MTR_8g092410 31.210 157 95 4 204 356 135 282 5.49e-13 70.5
MS.gene61254.t1 MTR_8g092410 27.528 178 97 3 114 265 112 283 6.42e-12 67.0
MS.gene61254.t1 MTR_3g023310 33.871 124 69 1 203 326 12 122 5.03e-12 64.7
MS.gene61254.t1 MTR_3g023310 36.893 103 55 1 248 340 11 113 6.77e-12 64.3
MS.gene61254.t1 MTR_1g112280 29.787 141 99 0 206 346 609 749 2.69e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61254.t1 AT4G17080 57.398 392 129 5 40 408 125 501 1.53e-141 414
MS.gene61254.t1 AT2G35170 58.235 340 119 6 68 384 107 446 5.61e-131 386
MS.gene61254.t1 AT1G21920 54.180 323 132 3 94 410 98 410 9.07e-102 309
MS.gene61254.t1 AT1G21920 57.540 252 101 2 94 339 98 349 1.99e-98 298
MS.gene61254.t1 AT1G77660 54.180 323 129 6 97 410 102 414 3.33e-96 295
MS.gene61254.t1 AT1G21980 37.059 170 107 0 165 334 77 246 4.81e-28 117
MS.gene61254.t1 AT1G21980 37.500 128 80 0 212 339 78 205 3.88e-19 90.5
MS.gene61254.t1 AT1G21980 30.370 135 93 1 163 296 121 255 8.89e-12 67.4
MS.gene61254.t1 AT2G41210 36.207 174 111 0 161 334 67 240 1.37e-27 115
MS.gene61254.t1 AT2G41210 38.281 128 79 0 212 339 72 199 1.81e-20 94.4
MS.gene61254.t1 AT1G77740 35.882 170 109 0 165 334 78 247 8.73e-27 113
MS.gene61254.t1 AT1G77740 36.719 128 81 0 212 339 79 206 9.75e-18 85.9
MS.gene61254.t1 AT1G77740 33.962 106 70 0 235 340 79 184 3.62e-11 65.5
MS.gene61254.t1 AT1G77740 35.882 170 109 0 165 334 78 247 8.73e-27 113
MS.gene61254.t1 AT1G77740 36.719 128 81 0 212 339 79 206 9.75e-18 85.9
MS.gene61254.t1 AT1G77740 33.962 106 70 0 235 340 79 184 3.62e-11 65.5
MS.gene61254.t1 AT3G56960 32.955 176 118 0 161 336 69 244 1.06e-26 113
MS.gene61254.t1 AT3G56960 36.719 128 81 0 212 339 74 201 7.48e-20 92.4
MS.gene61254.t1 AT3G56960 32.955 176 118 0 161 336 69 244 1.06e-26 113
MS.gene61254.t1 AT3G56960 36.719 128 81 0 212 339 74 201 7.48e-20 92.4
MS.gene61254.t1 AT1G60890 34.270 178 94 1 161 338 8 162 3.64e-25 108
MS.gene61254.t1 AT1G60890 34.118 170 112 0 153 322 23 192 1.98e-24 106
MS.gene61254.t1 AT1G60890 34.513 113 74 0 165 277 81 193 1.24e-12 70.1
MS.gene61254.t1 AT1G60890 34.270 178 94 1 161 338 20 174 3.85e-25 108
MS.gene61254.t1 AT1G60890 34.783 161 105 0 162 322 44 204 2.38e-24 106
MS.gene61254.t1 AT1G60890 34.513 113 74 0 165 277 93 205 1.48e-12 70.1
MS.gene61254.t1 AT2G26420 34.392 189 120 2 161 349 50 234 6.98e-25 107
MS.gene61254.t1 AT2G26420 34.392 189 120 2 161 349 50 234 7.78e-25 107
MS.gene61254.t1 AT2G26420 34.392 189 120 2 161 349 50 234 7.78e-25 107
MS.gene61254.t1 AT1G10900 35.625 160 103 0 163 322 33 192 4.22e-24 105
MS.gene61254.t1 AT1G10900 34.831 178 116 0 163 340 10 187 1.07e-23 104
MS.gene61254.t1 AT1G10900 30.769 156 85 1 205 337 6 161 1.82e-15 79.0
MS.gene61254.t1 AT1G10900 32.639 144 89 2 139 277 53 193 4.55e-12 68.6
MS.gene61254.t1 AT1G10900 35.625 160 103 0 163 322 33 192 4.22e-24 105
MS.gene61254.t1 AT1G10900 34.831 178 116 0 163 340 10 187 1.07e-23 104
MS.gene61254.t1 AT1G10900 30.769 156 85 1 205 337 6 161 1.82e-15 79.0
MS.gene61254.t1 AT1G10900 32.639 144 89 2 139 277 53 193 4.55e-12 68.6
MS.gene61254.t1 AT1G10900 35.625 160 103 0 163 322 33 192 4.22e-24 105
MS.gene61254.t1 AT1G10900 34.831 178 116 0 163 340 10 187 1.07e-23 104
MS.gene61254.t1 AT1G10900 30.769 156 85 1 205 337 6 161 1.82e-15 79.0
MS.gene61254.t1 AT1G10900 32.639 144 89 2 139 277 53 193 4.55e-12 68.6
MS.gene61254.t1 AT3G07960 32.258 186 122 1 161 346 24 205 6.59e-24 104
MS.gene61254.t1 AT3G07960 32.258 186 122 1 161 346 24 205 7.71e-24 104
MS.gene61254.t1 AT3G07960 32.258 186 122 1 161 346 24 205 7.71e-24 104
MS.gene61254.t1 AT3G07960 32.258 186 122 1 161 346 24 205 8.88e-24 104
MS.gene61254.t1 AT3G09920 27.413 259 167 2 146 392 23 272 1.10e-21 98.2
MS.gene61254.t1 AT3G09920 29.808 208 134 3 162 360 74 278 5.67e-21 95.9
MS.gene61254.t1 AT3G09920 27.413 259 167 2 146 392 23 272 1.10e-21 98.2
MS.gene61254.t1 AT3G09920 29.808 208 134 3 162 360 74 278 5.67e-21 95.9
MS.gene61254.t1 AT3G09920 27.413 259 167 2 146 392 23 272 1.10e-21 98.2
MS.gene61254.t1 AT3G09920 29.808 208 134 3 162 360 74 278 5.67e-21 95.9
MS.gene61254.t1 AT3G09920 27.413 259 167 2 146 392 23 272 1.10e-21 98.2
MS.gene61254.t1 AT3G09920 29.808 208 134 3 162 360 74 278 5.67e-21 95.9

Find 97 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTAGGACGGTACCATTTC+AGG 0.220617 8.2:+22995044 MS.gene61254:CDS
CTTGAAAGATTGAAACTTTG+AGG 0.305718 8.2:-22994435 None:intergenic
AGAGCTTAAATTCTGGATCT+TGG 0.306677 8.2:+22994684 MS.gene61254:CDS
CAACGTGTTGTATGGTCAAT+TGG 0.311671 8.2:+22994641 MS.gene61254:CDS
TTTGAAGGTGATTGGATTGA+TGG 0.327944 8.2:+22994803 MS.gene61254:CDS
AACAAATCTGATTCTGAAAT+CGG 0.341623 8.2:+22994242 MS.gene61254:CDS
TTTGGTGGTGATGTTTATAC+TGG 0.359699 8.2:+22994926 MS.gene61254:CDS
GAGAAAGTAAAGAGAGGTTA+AGG 0.372259 8.2:-22994492 None:intergenic
GAGCTTAAATTCTGGATCTT+GGG 0.376585 8.2:+22994685 MS.gene61254:CDS
CATATGAGTGGAAGATTTGA+AGG 0.378466 8.2:+22994788 MS.gene61254:CDS
AAGGGTTTGAGGCATGGAAT+TGG 0.379850 8.2:+22994890 MS.gene61254:CDS
GATTGAAACTTTGAGGTAAA+GGG 0.380834 8.2:-22994428 None:intergenic
TTTCATAAGGGGAAGTGCTC+AGG 0.382882 8.2:+22994746 MS.gene61254:CDS
ATTATGTTGGGGAATTCAAA+TGG 0.385157 8.2:+22995008 MS.gene61254:CDS
TTTCAGAATCAGATTTGTTA+AGG 0.386777 8.2:-22994238 None:intergenic
TCAACGATCTTGAGAAGAAT+AGG 0.388984 8.2:-22994586 None:intergenic
GTGGAAGATTTGAAGGTGAT+TGG 0.394569 8.2:+22994795 MS.gene61254:CDS
TGGGGTGTTAAACATGGATT+AGG 0.409371 8.2:+22995028 MS.gene61254:CDS
GGCATGGAATTGGAATTTAT+AGG 0.412594 8.2:+22994900 MS.gene61254:CDS
GGAGTTCATACTTGCAATGA+TGG 0.416556 8.2:+22994980 MS.gene61254:CDS
AAAAGCAAGACAGTCATATT+GGG 0.421127 8.2:+22996456 MS.gene61254:CDS
AATGGTCAGTGTCATGGCTT+TGG 0.421143 8.2:+22994959 MS.gene61254:CDS
TATGAAGGTGAGTTTCATAA+GGG 0.426937 8.2:+22994734 MS.gene61254:CDS
GAGTTAAAGAGCTTAAATTC+TGG 0.427388 8.2:+22994677 MS.gene61254:CDS
GCGGATATGATGCATGGCTT+TGG 0.433142 8.2:+22996296 MS.gene61254:CDS
TGCTTGAGAAGCGTTGTTCA+TGG 0.439654 8.2:-22994334 None:intergenic
TTATGAAGGTGAGTTTCATA+AGG 0.441190 8.2:+22994733 MS.gene61254:CDS
AGTGTGGTCACTGGCAGAAT+GGG 0.442429 8.2:+22996417 MS.gene61254:CDS
CATGCCACGCACCCTCATAT+CGG 0.449588 8.2:-22996343 None:intergenic
TCAGAATGGTCACCGATATG+AGG 0.450366 8.2:+22996331 MS.gene61254:CDS
CTCATCATCAACGTGTTGTA+TGG 0.452247 8.2:+22994633 MS.gene61254:CDS
AGATTGAAACTTTGAGGTAA+AGG 0.454037 8.2:-22994429 None:intergenic
GATGGAAAGTATGATGGGTT+TGG 0.464094 8.2:+22994821 MS.gene61254:CDS
GAATAATAAGCTTTCTTCAT+CGG 0.464931 8.2:+22994607 MS.gene61254:CDS
GTAGGTATCGTGGACAGTAT+AGG 0.468147 8.2:+22994867 MS.gene61254:CDS
TTATGTTGGGGAATTCAAAT+GGG 0.469276 8.2:+22995009 MS.gene61254:CDS
CAGTGTGGTCACTGGCAGAA+TGG 0.474325 8.2:+22996416 MS.gene61254:CDS
AAGAGAAAATCAAGAAGAGT+TGG 0.478692 8.2:-22994524 None:intergenic
GTAAAGGGTATTGTAAAAGA+AGG 0.483157 8.2:-22994413 None:intergenic
TGGATTGATGGAAAGTATGA+TGG 0.494170 8.2:+22994815 MS.gene61254:CDS
ATGATGGGAGTCATTATGTT+GGG 0.495925 8.2:+22994996 MS.gene61254:CDS
AATGTCAAAGAAGGATGAAC+TGG 0.498099 8.2:+22997174 MS.gene61254:CDS
TGAAGGAAGAAGACAAGGAC+TGG 0.499777 8.2:+22996364 MS.gene61254:CDS
CTGGACAGCTTTGAAAACCT+TGG 0.499930 8.2:-22996501 None:intergenic
GGTGTATGAGATGGTGAAGA+TGG 0.507475 8.2:-22994362 None:intergenic
GGAGTCTATCAATTTCAGAA+TGG 0.507486 8.2:+22996317 MS.gene61254:CDS
GAAAATGATGAGGAGTAACT+TGG 0.509080 8.2:-22994310 None:intergenic
AACGTGTTGTATGGTCAATT+GGG 0.513400 8.2:+22994642 MS.gene61254:CDS
TTCAAATGGGGTGTTAAACA+TGG 0.513973 8.2:+22995022 MS.gene61254:CDS
TGGGTTCAAGTTTACAGCAA+TGG 0.526362 8.2:+22994704 MS.gene61254:CDS
GTCAATTGGGTCAAAGGATG+AGG 0.530313 8.2:+22994655 MS.gene61254:CDS
CATATCCGCAAAATATTCTC+CGG 0.537617 8.2:-22996282 None:intergenic
TATAGGAAGGGTTTGAGGCA+TGG 0.542708 8.2:+22994884 MS.gene61254:CDS
TATGAGGGTGCGTGGCATGA+AGG 0.544188 8.2:+22996347 MS.gene61254:CDS
GTGATGTTTATACTGGTGAA+TGG 0.551261 8.2:+22994933 MS.gene61254:CDS
GACAGTATAGGAAGGGTTTG+AGG 0.555234 8.2:+22994879 MS.gene61254:CDS
GGGAAACACAGTGTGGTCAC+TGG 0.556623 8.2:+22996408 MS.gene61254:CDS
TGAAAAGAGAAAGTAAAGAG+AGG 0.558903 8.2:-22994498 None:intergenic
ATCCTTCTTTGACATTCCGT+AGG 0.560605 8.2:-22997167 None:intergenic
ATCATTGAACATTGTAATCA+CGG 0.560703 8.2:-22997279 None:intergenic
AAGGGGAAGTGCTCAGGGAG+TGG 0.561581 8.2:+22994752 MS.gene61254:CDS
GAGTTCATACTTGCAATGAT+GGG 0.567190 8.2:+22994981 MS.gene61254:CDS
AGCTAGAGTTGCAGCTGTGA+AGG 0.569793 8.2:+22997237 MS.gene61254:CDS
TTCATAAGGGGAAGTGCTCA+GGG 0.572490 8.2:+22994747 MS.gene61254:CDS
TATACTGGTGAATGGTGTAA+TGG 0.573863 8.2:+22994941 MS.gene61254:CDS
AGCAATGGTGATGTTTATGA+AGG 0.574309 8.2:+22994719 MS.gene61254:CDS
CAGAATGGTCACCGATATGA+GGG 0.575287 8.2:+22996332 MS.gene61254:CDS
CAGCTTTGAAAACCTTGGCA+TGG 0.579822 8.2:-22996496 None:intergenic
AGCCTACGGAATGTCAAAGA+AGG 0.581674 8.2:+22997165 MS.gene61254:CDS
GGATTGATGGAAAGTATGAT+GGG 0.582051 8.2:+22994816 MS.gene61254:CDS
ATGGGTTTGGTGTTGAAACG+TGG 0.586936 8.2:+22994834 MS.gene61254:CDS
GGTGTTGAAACGTGGGCTAG+AGG 0.588676 8.2:+22994842 MS.gene61254:CDS
TTGTGTGTAGGTGTATGAGA+TGG 0.591599 8.2:-22994371 None:intergenic
TGTATGGTCAATTGGGTCAA+AGG 0.595542 8.2:+22994649 MS.gene61254:CDS
AGAAATGGGGACATATATGC+CGG 0.598656 8.2:+22996263 MS.gene61254:intron
AAACGTGGGCTAGAGGAAGT+AGG 0.599270 8.2:+22994849 MS.gene61254:CDS
TGGTGTAATGGTCAGTGTCA+TGG 0.600058 8.2:+22994953 MS.gene61254:CDS
GAAGGAAGAAGACAAGGACT+GGG 0.603856 8.2:+22996365 MS.gene61254:CDS
GTATCGTGGACAGTATAGGA+AGG 0.617143 8.2:+22994871 MS.gene61254:CDS
TGAACAGGATGCTCATTGTG+CGG 0.617594 8.2:+22997135 MS.gene61254:intron
GTCACCGATATGAGGGTGCG+TGG 0.630941 8.2:+22996339 MS.gene61254:CDS
AATGATGGGAGTCATTATGT+TGG 0.635184 8.2:+22994995 MS.gene61254:CDS
TTGTTATTACTGCAGAAATG+GGG 0.635687 8.2:+22996250 MS.gene61254:intron
TGATGGGAGTCATTATGTTG+GGG 0.636425 8.2:+22994997 MS.gene61254:CDS
TGTGCGGCGGAGAAAGCCTA+CGG 0.641747 8.2:+22997151 MS.gene61254:CDS
TTGGCATGGTCTACAGCACA+TGG 0.645980 8.2:-22996482 None:intergenic
ATGTGCTGTAGACCATGCCA+AGG 0.647382 8.2:+22996484 MS.gene61254:CDS
TATCGTGGACAGTATAGGAA+GGG 0.648017 8.2:+22994872 MS.gene61254:CDS
TATGTTGGGGAATTCAAATG+GGG 0.656507 8.2:+22995010 MS.gene61254:CDS
TGGCATGAAGGAAGAAGACA+AGG 0.660942 8.2:+22996359 MS.gene61254:CDS
TGGGTTTGGTGTTGAAACGT+GGG 0.670518 8.2:+22994835 MS.gene61254:CDS
ATGAAGGTGAGTTTCATAAG+GGG 0.671828 8.2:+22994735 MS.gene61254:CDS
GCTAGAGGAAGTAGGTATCG+TGG 0.672052 8.2:+22994857 MS.gene61254:CDS
GTGTTAAACATGGATTAGGA+CGG 0.683306 8.2:+22995032 MS.gene61254:CDS
ACAGGATGCTCATTGTGCGG+CGG 0.690381 8.2:+22997138 MS.gene61254:intron
TGTTCATGGTGAAAATGATG+AGG 0.704077 8.2:-22994320 None:intergenic
AGAAACGGGGAAACACAGTG+TGG 0.759758 8.2:+22996401 MS.gene61254:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTACTTTTTATGAATTAAA+AGG + chr8.2:22996608-22996627 MS.gene61254:intron 10.0%
!!! TTACTTTTTATGAATTAAAA+GGG + chr8.2:22996609-22996628 MS.gene61254:intron 10.0%
!!! AAGAGAATTTACTTTTATTT+GGG + chr8.2:22995370-22995389 MS.gene61254:intron 15.0%
!!! CAAAGCTTTATATAAAAAAT+GGG - chr8.2:22995549-22995568 None:intergenic 15.0%
!!! TAAGAGAATTTACTTTTATT+TGG + chr8.2:22995369-22995388 MS.gene61254:intron 15.0%
!! AAGTAAAAAATGATGAAATC+AGG - chr8.2:22996758-22996777 None:intergenic 20.0%
!! AATACAGATAAAAATCAAAC+TGG - chr8.2:22995954-22995973 None:intergenic 20.0%
!! AGTAAAAAATGATGAAATCA+GGG - chr8.2:22996757-22996776 None:intergenic 20.0%
!! AGTTCAAAATTGTATTTAAG+TGG - chr8.2:22995200-22995219 None:intergenic 20.0%
!! ATGTCAATCAAATTGAATAA+TGG - chr8.2:22996129-22996148 None:intergenic 20.0%
!! CATAGTTATTACTTATTGTT+TGG - chr8.2:22997084-22997103 None:intergenic 20.0%
!! CTTAAAATGAACACAAAATT+GGG - chr8.2:22995353-22995372 None:intergenic 20.0%
!! TCTTAAAATGAACACAAAAT+TGG - chr8.2:22995354-22995373 None:intergenic 20.0%
!! TGTCAATCAAATTGAATAAT+GGG - chr8.2:22996128-22996147 None:intergenic 20.0%
!!! ATCATTTTTTACTTTCTTCT+TGG + chr8.2:22996764-22996783 MS.gene61254:intron 20.0%
!!! ATTGGAATTTATAGGTTTTT+TGG + chr8.2:22994908-22994927 MS.gene61254:CDS 20.0%
!!! CATGATTATATATTGTTTTG+AGG + chr8.2:22996647-22996666 MS.gene61254:intron 20.0%
!!! CCAAAGCTTTATATAAAAAA+TGG - chr8.2:22995550-22995569 None:intergenic 20.0%
!!! CCATTTTTTATATAAAGCTT+TGG + chr8.2:22995547-22995566 MS.gene61254:intron 20.0%
!!! TCATTTTTTACTTTCTTCTT+GGG + chr8.2:22996765-22996784 MS.gene61254:intron 20.0%
! AAAAAAGAACTAACCTGAAA+TGG - chr8.2:22995060-22995079 None:intergenic 25.0%
! AAACAGTCTTACAAATATGA+TGG - chr8.2:22996862-22996881 None:intergenic 25.0%
! ATCATATTTGTAAGACTGTT+TGG + chr8.2:22996861-22996880 MS.gene61254:intron 25.0%
! ATTCAAAAATGACTATTACC+TGG - chr8.2:22996523-22996542 None:intergenic 25.0%
! ATTTACTTTCAAAAGCCAAA+AGG + chr8.2:22995794-22995813 MS.gene61254:intron 25.0%
! CTAGCAATGTATAATGTAAT+TGG + chr8.2:22996151-22996170 MS.gene61254:intron 25.0%
! GAATAATAAGCTTTCTTCAT+CGG + chr8.2:22994607-22994626 MS.gene61254:CDS 25.0%
! GATTGAAAAATGAGTGAAAT+CGG - chr8.2:22994291-22994310 None:intergenic 25.0%
! TAAAATACTTGGAAAGTGAT+TGG + chr8.2:22995990-22996009 MS.gene61254:intron 25.0%
! TCATATTTGTAAGACTGTTT+GGG + chr8.2:22996862-22996881 MS.gene61254:intron 25.0%
! TGTATGTGTTTCTTCTAAAT+AGG + chr8.2:22995890-22995909 MS.gene61254:intron 25.0%
! TTATGTGAAAAACTACTGTA+AGG + chr8.2:22996584-22996603 MS.gene61254:intron 25.0%
! TTGTATCTAGCTAAAATACT+TGG + chr8.2:22995979-22995998 MS.gene61254:intron 25.0%
! TTTCATAAACTATCTTACAG+AGG - chr8.2:22996946-22996965 None:intergenic 25.0%
!! AGATTTGACATTATCTGTTT+TGG + chr8.2:22995225-22995244 MS.gene61254:intron 25.0%
!! GTTTATCATTTTCATATGAG+TGG + chr8.2:22994776-22994795 MS.gene61254:CDS 25.0%
!!! AAAAGAAGGTTTGTTTTGAT+GGG - chr8.2:22994402-22994421 None:intergenic 25.0%
!!! AACAAATCTGATTCTGAAAT+CGG + chr8.2:22994242-22994261 MS.gene61254:CDS 25.0%
!!! ATTTGTTATTACTGCAGAAA+TGG + chr8.2:22996248-22996267 MS.gene61254:intron 25.0%
!!! GATATTTATTTAGCTTTGGT+AGG + chr8.2:22995665-22995684 MS.gene61254:intron 25.0%
!!! GTACTTCTTTAATTTTGAAC+AGG + chr8.2:22997120-22997139 MS.gene61254:intron 25.0%
!!! TAAAAGAAGGTTTGTTTTGA+TGG - chr8.2:22994403-22994422 None:intergenic 25.0%
!!! TTTCAGAATCAGATTTGTTA+AGG - chr8.2:22994241-22994260 None:intergenic 25.0%
!!! TTTGTTATTACTGCAGAAAT+GGG + chr8.2:22996249-22996268 MS.gene61254:intron 25.0%
AAAAAGCAAGACAGTCATAT+TGG + chr8.2:22996455-22996474 MS.gene61254:CDS 30.0%
AAAAGCAAGACAGTCATATT+GGG + chr8.2:22996456-22996475 MS.gene61254:CDS 30.0%
AAGAGAAAATCAAGAAGAGT+TGG - chr8.2:22994527-22994546 None:intergenic 30.0%
ATTAACCACGATTCAGTATT+TGG + chr8.2:22995833-22995852 MS.gene61254:intron 30.0%
ATTATGTTGGGGAATTCAAA+TGG + chr8.2:22995008-22995027 MS.gene61254:CDS 30.0%
CTTGAAAGATTGAAACTTTG+AGG - chr8.2:22994438-22994457 None:intergenic 30.0%
GAGTTAAAGAGCTTAAATTC+TGG + chr8.2:22994677-22994696 MS.gene61254:CDS 30.0%
GGTTGAGACATTATATAGTT+TGG - chr8.2:22995933-22995952 None:intergenic 30.0%
GTCAAATTCTTCACATATAG+TGG + chr8.2:22995507-22995526 MS.gene61254:intron 30.0%
TAATTGTGTCAATGTCAAGT+CGG + chr8.2:22995405-22995424 MS.gene61254:intron 30.0%
TATGAAGGTGAGTTTCATAA+GGG + chr8.2:22994734-22994753 MS.gene61254:CDS 30.0%
TGAAAAGAGAAAGTAAAGAG+AGG - chr8.2:22994501-22994520 None:intergenic 30.0%
TTATGAAGGTGAGTTTCATA+AGG + chr8.2:22994733-22994752 MS.gene61254:CDS 30.0%
TTATGTTGGGGAATTCAAAT+GGG + chr8.2:22995009-22995028 MS.gene61254:CDS 30.0%
! GTATACTTTTCTGCTTTCAT+GGG + chr8.2:22995855-22995874 MS.gene61254:intron 30.0%
! TAACCATTCTGATAATGCTA+AGG - chr8.2:22995116-22995135 None:intergenic 30.0%
! TTGTTATTACTGCAGAAATG+GGG + chr8.2:22996250-22996269 MS.gene61254:intron 30.0%
!! AATCACTTTTACAAGTTCAG+CGG + chr8.2:22995641-22995660 MS.gene61254:intron 30.0%
!! AATGTACACTTTTAGAAACG+GGG + chr8.2:22996388-22996407 MS.gene61254:CDS 30.0%
!! AGATTGAAACTTTGAGGTAA+AGG - chr8.2:22994432-22994451 None:intergenic 30.0%
!! GAATGTACACTTTTAGAAAC+GGG + chr8.2:22996387-22996406 MS.gene61254:CDS 30.0%
!! GATTGAAACTTTGAGGTAAA+GGG - chr8.2:22994431-22994450 None:intergenic 30.0%
!! GGAATGTACACTTTTAGAAA+CGG + chr8.2:22996386-22996405 MS.gene61254:CDS 30.0%
!! GTAAAGGGTATTGTAAAAGA+AGG - chr8.2:22994416-22994435 None:intergenic 30.0%
!! TGTTGATTCTTTGTTAAGTG+TGG + chr8.2:22995138-22995157 MS.gene61254:intron 30.0%
!!! ATATGACTGTCTTGCTTTTT+AGG - chr8.2:22996455-22996474 None:intergenic 30.0%
!!! GGAATTTATAGGTTTTTTGG+TGG + chr8.2:22994911-22994930 MS.gene61254:CDS 30.0%
!!! TATGACTGTCTTGCTTTTTA+GGG - chr8.2:22996454-22996473 None:intergenic 30.0%
AAATCAGGGAATGTCTATTC+AGG - chr8.2:22996743-22996762 None:intergenic 35.0%
AACGTGTTGTATGGTCAATT+GGG + chr8.2:22994642-22994661 MS.gene61254:CDS 35.0%
AACTTGACCATATTCTTGCA+CGG - chr8.2:22996071-22996090 None:intergenic 35.0%
AATGTCAAAGAAGGATGAAC+TGG + chr8.2:22997174-22997193 MS.gene61254:CDS 35.0%
ACTTGTAAAAGTGATTGGCA+AGG - chr8.2:22995637-22995656 None:intergenic 35.0%
AGAGCTTAAATTCTGGATCT+TGG + chr8.2:22994684-22994703 MS.gene61254:CDS 35.0%
ATAGTGGTCATTGTGATTCT+AGG + chr8.2:22995523-22995542 MS.gene61254:intron 35.0%
ATCGTGGTTAATGAGAAACT+AGG - chr8.2:22995825-22995844 None:intergenic 35.0%
ATGAAGGTGAGTTTCATAAG+GGG + chr8.2:22994735-22994754 MS.gene61254:CDS 35.0%
CAGGTTGTTGAAAATTTGAG+TGG - chr8.2:22995586-22995605 None:intergenic 35.0%
CATATCCGCAAAATATTCTC+CGG - chr8.2:22996285-22996304 None:intergenic 35.0%
CATATGAGTGGAAGATTTGA+AGG + chr8.2:22994788-22994807 MS.gene61254:CDS 35.0%
CTAGTACAACAGAATGTTGT+TGG - chr8.2:22995717-22995736 None:intergenic 35.0%
CTTTCAAAAGCCAAAAGGAT+TGG + chr8.2:22995799-22995818 MS.gene61254:intron 35.0%
GAAAATGATGAGGAGTAACT+TGG - chr8.2:22994313-22994332 None:intergenic 35.0%
GAGAAAGTAAAGAGAGGTTA+AGG - chr8.2:22994495-22994514 None:intergenic 35.0%
GAGCTTAAATTCTGGATCTT+GGG + chr8.2:22994685-22994704 MS.gene61254:CDS 35.0%
GAGTTCATACTTGCAATGAT+GGG + chr8.2:22994981-22995000 MS.gene61254:CDS 35.0%
GCAAGGTAAATGAATCAAAC+AGG - chr8.2:22995620-22995639 None:intergenic 35.0%
GCTGAACTTGTAAAAGTGAT+TGG - chr8.2:22995642-22995661 None:intergenic 35.0%
GCTGCAAACACTTAATTAAG+TGG + chr8.2:22997053-22997072 MS.gene61254:intron 35.0%
GGAGTCTATCAATTTCAGAA+TGG + chr8.2:22996317-22996336 MS.gene61254:CDS 35.0%
GGCATGGAATTGGAATTTAT+AGG + chr8.2:22994900-22994919 MS.gene61254:CDS 35.0%
GTATACCAAATACTGAATCG+TGG - chr8.2:22995841-22995860 None:intergenic 35.0%
GTCAATTAAAATAAGCCCTC+AGG - chr8.2:22996813-22996832 None:intergenic 35.0%
GTGATGTTTATACTGGTGAA+TGG + chr8.2:22994933-22994952 MS.gene61254:CDS 35.0%
GTTCCTTAGCATTATCAGAA+TGG + chr8.2:22995110-22995129 MS.gene61254:intron 35.0%
TATACTGGTGAATGGTGTAA+TGG + chr8.2:22994941-22994960 MS.gene61254:CDS 35.0%
TATGTTGGGGAATTCAAATG+GGG + chr8.2:22995010-22995029 MS.gene61254:CDS 35.0%
TCAACGATCTTGAGAAGAAT+AGG - chr8.2:22994589-22994608 None:intergenic 35.0%
TGTTCATGGTGAAAATGATG+AGG - chr8.2:22994323-22994342 None:intergenic 35.0%
TGTTGTTGGCATTGTTTGTT+CGG - chr8.2:22995703-22995722 None:intergenic 35.0%
TTCTTTGTTAAGTGTGGACT+TGG + chr8.2:22995144-22995163 MS.gene61254:intron 35.0%
TTTGAAGGTGATTGGATTGA+TGG + chr8.2:22994803-22994822 MS.gene61254:CDS 35.0%
! AATGATGGGAGTCATTATGT+TGG + chr8.2:22994995-22995014 MS.gene61254:CDS 35.0%
! AGCAATGGTGATGTTTATGA+AGG + chr8.2:22994719-22994738 MS.gene61254:CDS 35.0%
! ATATGCCGGAGAATATTTTG+CGG + chr8.2:22996277-22996296 MS.gene61254:CDS 35.0%
! ATGATGGGAGTCATTATGTT+GGG + chr8.2:22994996-22995015 MS.gene61254:CDS 35.0%
! CGGCGATATTTATTTAGCTT+TGG + chr8.2:22995661-22995680 MS.gene61254:intron 35.0%
! CTCAAATTTTCAACAACCTG+TGG + chr8.2:22995586-22995605 MS.gene61254:intron 35.0%
! CTGACTTCAATCTGAAGTAT+TGG + chr8.2:22995454-22995473 MS.gene61254:intron 35.0%
! GGATTGATGGAAAGTATGAT+GGG + chr8.2:22994816-22994835 MS.gene61254:CDS 35.0%
! GGTATACTTTTCTGCTTTCA+TGG + chr8.2:22995854-22995873 MS.gene61254:intron 35.0%
! TATTTTGCGGATATGATGCA+TGG + chr8.2:22996290-22996309 MS.gene61254:CDS 35.0%
! TGGATTGATGGAAAGTATGA+TGG + chr8.2:22994815-22994834 MS.gene61254:CDS 35.0%
! TTCAAATGGGGTGTTAAACA+TGG + chr8.2:22995022-22995041 MS.gene61254:CDS 35.0%
!! GTGTTAAACATGGATTAGGA+CGG + chr8.2:22995032-22995051 MS.gene61254:CDS 35.0%
!! TTTGGTGGTGATGTTTATAC+TGG + chr8.2:22994926-22994945 MS.gene61254:CDS 35.0%
!!! GTTTTGGTTAAGTGTACTTC+TGG + chr8.2:22995241-22995260 MS.gene61254:intron 35.0%
ACTGTATCCGTGCAAGAATA+TGG + chr8.2:22996061-22996080 MS.gene61254:intron 40.0%
AGAAATGGGGACATATATGC+CGG + chr8.2:22996263-22996282 MS.gene61254:intron 40.0%
AGCTGTCGAAGCTAATTTCA+AGG - chr8.2:22996212-22996231 None:intergenic 40.0%
AGTCAGATTGAATGCATGTC+TGG - chr8.2:22995440-22995459 None:intergenic 40.0%
ATCCTTCTTTGACATTCCGT+AGG - chr8.2:22997170-22997189 None:intergenic 40.0%
ATGGCAACACCAAAGATACA+AGG - chr8.2:22996677-22996696 None:intergenic 40.0%
ATGTCCATCACGAATCATGA+TGG - chr8.2:22996696-22996715 None:intergenic 40.0%
CAACGTGTTGTATGGTCAAT+TGG + chr8.2:22994641-22994660 MS.gene61254:CDS 40.0%
CTCATCATCAACGTGTTGTA+TGG + chr8.2:22994633-22994652 MS.gene61254:CDS 40.0%
GGAGTTCATACTTGCAATGA+TGG + chr8.2:22994980-22994999 MS.gene61254:CDS 40.0%
GTGGAAGATTTGAAGGTGAT+TGG + chr8.2:22994795-22994814 MS.gene61254:CDS 40.0%
GTTAAGTGTGGACTTGGATT+AGG + chr8.2:22995150-22995169 MS.gene61254:intron 40.0%
TACTTTCTTCTTGGGCTTTC+TGG + chr8.2:22996773-22996792 MS.gene61254:intron 40.0%
TATCGTGGACAGTATAGGAA+GGG + chr8.2:22994872-22994891 MS.gene61254:CDS 40.0%
TGAGGCTTTCCTTGTATCTT+TGG + chr8.2:22996665-22996684 MS.gene61254:intron 40.0%
TGATGGGAGTCATTATGTTG+GGG + chr8.2:22994997-22995016 MS.gene61254:CDS 40.0%
TGTATGGTCAATTGGGTCAA+AGG + chr8.2:22994649-22994668 MS.gene61254:CDS 40.0%
TGTCGAAGCTAATTTCAAGG+AGG - chr8.2:22996209-22996228 None:intergenic 40.0%
TTGTGTGTAGGTGTATGAGA+TGG - chr8.2:22994374-22994393 None:intergenic 40.0%
! AGAAACTAGGCCAATCCTTT+TGG - chr8.2:22995812-22995831 None:intergenic 40.0%
! ATAAGCCCTCAGGTTGTTTA+AGG - chr8.2:22996803-22996822 None:intergenic 40.0%
! TGGGGTGTTAAACATGGATT+AGG + chr8.2:22995028-22995047 MS.gene61254:CDS 40.0%
! TGGGTTCAAGTTTACAGCAA+TGG + chr8.2:22994704-22994723 MS.gene61254:CDS 40.0%
!! GATGGAAAGTATGATGGGTT+TGG + chr8.2:22994821-22994840 MS.gene61254:CDS 40.0%
!!! TGATGGGTTTTGTTGTGTGT+AGG - chr8.2:22994386-22994405 None:intergenic 40.0%
AATGGTCAGTGTCATGGCTT+TGG + chr8.2:22994959-22994978 MS.gene61254:CDS 45.0%
AGCCTACGGAATGTCAAAGA+AGG + chr8.2:22997165-22997184 MS.gene61254:CDS 45.0%
CAGAATGGTCACCGATATGA+GGG + chr8.2:22996332-22996351 MS.gene61254:CDS 45.0%
GAAGGAAGAAGACAAGGACT+GGG + chr8.2:22996365-22996384 MS.gene61254:CDS 45.0%
GACAGTATAGGAAGGGTTTG+AGG + chr8.2:22994879-22994898 MS.gene61254:CDS 45.0%
GATTAGGACGGTACCATTTC+AGG + chr8.2:22995044-22995063 MS.gene61254:CDS 45.0%
GGTGTATGAGATGGTGAAGA+TGG - chr8.2:22994365-22994384 None:intergenic 45.0%
GTATCGTGGACAGTATAGGA+AGG + chr8.2:22994871-22994890 MS.gene61254:CDS 45.0%
GTCAATTGGGTCAAAGGATG+AGG + chr8.2:22994655-22994674 MS.gene61254:CDS 45.0%
GTGGACCTTAAACAACCTGA+GGG + chr8.2:22996795-22996814 MS.gene61254:intron 45.0%
GTTGCCATCATGATTCGTGA+TGG + chr8.2:22996689-22996708 MS.gene61254:intron 45.0%
TCAGAATGGTCACCGATATG+AGG + chr8.2:22996331-22996350 MS.gene61254:CDS 45.0%
TGAACAGGATGCTCATTGTG+CGG + chr8.2:22997135-22997154 MS.gene61254:intron 45.0%
TGAAGGAAGAAGACAAGGAC+TGG + chr8.2:22996364-22996383 MS.gene61254:CDS 45.0%
TGGCATGAAGGAAGAAGACA+AGG + chr8.2:22996359-22996378 MS.gene61254:CDS 45.0%
TGGTGTAATGGTCAGTGTCA+TGG + chr8.2:22994953-22994972 MS.gene61254:CDS 45.0%
TGTCAATGTCAAGTCGGTGT+CGG + chr8.2:22995411-22995430 MS.gene61254:intron 45.0%
TTTCTTCTTGGGCTTTCTGG+TGG + chr8.2:22996776-22996795 MS.gene61254:intron 45.0%
! AAGGGTTTGAGGCATGGAAT+TGG + chr8.2:22994890-22994909 MS.gene61254:CDS 45.0%
! CAAGGTTTTCAAAGCTGTCC+AGG + chr8.2:22996502-22996521 MS.gene61254:CDS 45.0%
! GTAGGTATCGTGGACAGTAT+AGG + chr8.2:22994867-22994886 MS.gene61254:CDS 45.0%
! TATAGGAAGGGTTTGAGGCA+TGG + chr8.2:22994884-22994903 MS.gene61254:CDS 45.0%
! TTCTGGTTGTTTGATGCAGC+AGG + chr8.2:22995258-22995277 MS.gene61254:intron 45.0%
!! ATGGGTTTGGTGTTGAAACG+TGG + chr8.2:22994834-22994853 MS.gene61254:CDS 45.0%
!! CAGCTTTGAAAACCTTGGCA+TGG - chr8.2:22996499-22996518 None:intergenic 45.0%
!! CTGGACAGCTTTGAAAACCT+TGG - chr8.2:22996504-22996523 None:intergenic 45.0%
!! GCAGCAGGACTTTGATTTTC+TGG + chr8.2:22995273-22995292 MS.gene61254:intron 45.0%
!! TGCTTGAGAAGCGTTGTTCA+TGG - chr8.2:22994337-22994356 None:intergenic 45.0%
!! TGGGTTTGGTGTTGAAACGT+GGG + chr8.2:22994835-22994854 MS.gene61254:CDS 45.0%
!! TTCATAAGGGGAAGTGCTCA+GGG + chr8.2:22994747-22994766 MS.gene61254:CDS 45.0%
!! TTTCATAAGGGGAAGTGCTC+AGG + chr8.2:22994746-22994765 MS.gene61254:CDS 45.0%
AGAAACGGGGAAACACAGTG+TGG + chr8.2:22996401-22996420 MS.gene61254:CDS 50.0%
AGCTAGAGTTGCAGCTGTGA+AGG + chr8.2:22997237-22997256 MS.gene61254:CDS 50.0%
AGTGTGGTCACTGGCAGAAT+GGG + chr8.2:22996417-22996436 MS.gene61254:CDS 50.0%
ATGTGCTGTAGACCATGCCA+AGG + chr8.2:22996484-22996503 MS.gene61254:CDS 50.0%
CAAACAGGTGCTTCAACCAC+AGG - chr8.2:22995605-22995624 None:intergenic 50.0%
GCGGATATGATGCATGGCTT+TGG + chr8.2:22996296-22996315 MS.gene61254:CDS 50.0%
GGTGGACCTTAAACAACCTG+AGG + chr8.2:22996794-22996813 MS.gene61254:intron 50.0%
TTGGCATGGTCTACAGCACA+TGG - chr8.2:22996485-22996504 None:intergenic 50.0%
! GCTAGAGGAAGTAGGTATCG+TGG + chr8.2:22994857-22994876 MS.gene61254:CDS 50.0%
!! AAACGTGGGCTAGAGGAAGT+AGG + chr8.2:22994849-22994868 MS.gene61254:CDS 50.0%
ACAGGATGCTCATTGTGCGG+CGG + chr8.2:22997138-22997157 MS.gene61254:intron 55.0%
CAGTGTGGTCACTGGCAGAA+TGG + chr8.2:22996416-22996435 MS.gene61254:CDS 55.0%
CATGCCACGCACCCTCATAT+CGG - chr8.2:22996346-22996365 None:intergenic 55.0%
GGGAAACACAGTGTGGTCAC+TGG + chr8.2:22996408-22996427 MS.gene61254:CDS 55.0%
! TATGAGGGTGCGTGGCATGA+AGG + chr8.2:22996347-22996366 MS.gene61254:CDS 55.0%
!! GGTGTTGAAACGTGGGCTAG+AGG + chr8.2:22994842-22994861 MS.gene61254:CDS 55.0%
TGTGCGGCGGAGAAAGCCTA+CGG + chr8.2:22997151-22997170 MS.gene61254:CDS 60.0%
! GTCACCGATATGAGGGTGCG+TGG + chr8.2:22996339-22996358 MS.gene61254:CDS 60.0%
!! AAGGGGAAGTGCTCAGGGAG+TGG + chr8.2:22994752-22994771 MS.gene61254:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 22994230 22997300 22994230 ID=MS.gene61254
chr8.2 mRNA 22994230 22997300 22994230 ID=MS.gene61254.t1;Parent=MS.gene61254
chr8.2 exon 22994230 22995065 22994230 ID=MS.gene61254.t1.exon1;Parent=MS.gene61254.t1
chr8.2 CDS 22994230 22995065 22994230 ID=cds.MS.gene61254.t1;Parent=MS.gene61254.t1
chr8.2 exon 22996265 22996523 22996265 ID=MS.gene61254.t1.exon2;Parent=MS.gene61254.t1
chr8.2 CDS 22996265 22996523 22996265 ID=cds.MS.gene61254.t1;Parent=MS.gene61254.t1
chr8.2 exon 22997142 22997300 22997142 ID=MS.gene61254.t1.exon3;Parent=MS.gene61254.t1
chr8.2 CDS 22997142 22997300 22997142 ID=cds.MS.gene61254.t1;Parent=MS.gene61254.t1
Gene Sequence

>MS.gene61254

ATGCGTCACCTTAACAAATCTGATTCTGAAATCGGAAAAGAAAATTTCAATCTTTCTTCCGATTTCACTCATTTTTCAATCCAAGTTACTCCTCATCATTTTCACCATGAACAACGCTTCTCAAGCAACACTCCATCTTCACCATCTCATACACCTACACACAACAAAACCCATCAAAACAAACCTTCTTTTACAATACCCTTTACCTCAAAGTTTCAATCTTTCAAGCTTCTCACACGTTTTCATTTCATCATCTTCATTTCCTTAACCTCTCTTTACTTTCTCTTTTCACATCCAACTCTTCTTGATTTTCTCTTTGTGCTACTTTTCTCATCAGCAATTTTTGTTTCTATCAACCTATTCTTCTCAAGATCGTTGAATAATAAGCTTTCTTCATCGGATTCTCATCATCAACGTGTTGTATGGTCAATTGGGTCAAAGGATGAGGAGTTAAAGAGCTTAAATTCTGGATCTTGGGTTCAAGTTTACAGCAATGGTGATGTTTATGAAGGTGAGTTTCATAAGGGGAAGTGCTCAGGGAGTGGTGTTTATCATTTTCATATGAGTGGAAGATTTGAAGGTGATTGGATTGATGGAAAGTATGATGGGTTTGGTGTTGAAACGTGGGCTAGAGGAAGTAGGTATCGTGGACAGTATAGGAAGGGTTTGAGGCATGGAATTGGAATTTATAGGTTTTTTGGTGGTGATGTTTATACTGGTGAATGGTGTAATGGTCAGTGTCATGGCTTTGGAGTTCATACTTGCAATGATGGGAGTCATTATGTTGGGGAATTCAAATGGGGTGTTAAACATGGATTAGGACGGTACCATTTCAGGTTAGTTCTTTTTTTGTGTTTTCTTTTTTAGTTTACAGTTGCTTGTTCCTTAGCATTATCAGAATGGTTATTTGTTGATTCTTTGTTAAGTGTGGACTTGGATTAGGTGTTTTAATTTGATCATGAATTTGCCACTTAAATACAATTTTGAACTTGTAGAGATTTGACATTATCTGTTTTGGTTAAGTGTACTTCTGGTTGTTTGATGCAGCAGGACTTTGATTTTCTGGATTGAAGTTGTTAACTTTTCATTAACTAAGATTTTCTGTATGCATCTTATTCAACCCAATTTTGTGTTCATTTTAAGAGAATTTACTTTTATTTGGGCAGAGTTTTAGATAATTGTGTCAATGTCAAGTCGGTGTCGGATACCAGACATGCATTCAATCTGACTTCAATCTGAAGTATTGGTGTCTTCAATATGAAGTATCAGTGCTACAAGTCAAATTCTTCACATATAGTGGTCATTGTGATTCTAGGCCCATTTTTTATATAAAGCTTTGGTTGTAAAAAAAGACCACTCAAATTTTCAACAACCTGTGGTTGAAGCACCTGTTTGATTCATTTACCTTGCCAATCACTTTTACAAGTTCAGCGGCGATATTTATTTAGCTTTGGTAGGCTTAATAGCTAGCCGAACAAACAATGCCAACAACATTCTGTTGTACTAGCTCACATGATATATTTTCTTTTGTATTTTACTTTGATGTTCAATCAATTTATAAAAGATTTACTTTCAAAAGCCAAAAGGATTGGCCTAGTTTCTCATTAACCACGATTCAGTATTTGGTATACTTTTCTGCTTTCATGGGACAAACTCTGCATGTATGTGTTTCTTCTAAATAGGAAGAATTGTTAAGAATACCAAACTATATAATGTCTCAACCAGTTTGATTTTTATCTGTATTATATGTTGTATCTAGCTAAAATACTTGGAAAGTGATTGGAATATTGAATCTGTTTGTAGTGATGTAAATGTGCTTGATATTTCTGTTACTGTATCCGTGCAAGAATATGGTCAAGTTGTGTTCTTCAATCTTACATCATTATTAGCTTGAACCCATTATTCAATTTGATTGACATTTCTAGCAATGTATAATGTAATTGGCTTTTTTTTTTTTATCATGATTGAAAGAACAACCTCCTTGAAATTAGCTTCGACAGCTATTTTTAAATTTATATATTTGTTATTACTGCAGAAATGGGGACATATATGCCGGAGAATATTTTGCGGATATGATGCATGGCTTTGGAGTCTATCAATTTCAGAATGGTCACCGATATGAGGGTGCGTGGCATGAAGGAAGAAGACAAGGACTGGGAATGTACACTTTTAGAAACGGGGAAACACAGTGTGGTCACTGGCAGAATGGGATTCTTGATAACCCTAAAAAGCAAGACAGTCATATTGGGTCTCCATGTGCTGTAGACCATGCCAAGGTTTTCAAAGCTGTCCAGGTAATAGTCATTTTTGAATTTTTGCACATATATGATTGATCAATACATGTTACTAGATACTTATGTGAAAAACTACTGTAAGGTATTACTTTTTATGAATTAAAAGGGAATTAAAAACAGAAACATGATTATATATTGTTTTGAGGCTTTCCTTGTATCTTTGGTGTTGCCATCATGATTCGTGATGGACATTCAAATAATGAAATCAGAAAGAAACCTGAATAGACATTCCCTGATTTCATCATTTTTTACTTTCTTCTTGGGCTTTCTGGTGGACCTTAAACAACCTGAGGGCTTATTTTAATTGACTAATTTGAGCTTATCTACTGTATAAACCATCATATTTGTAAGACTGTTTGGGAGAGCTTATGTGAACAACTTATAACATATCGTAGATTTTTTTCTGCTTATTTTCATAACCTCTGTAAGATAGTTTATGAAAACAGCTTATAACTTATATAAACAATTTTATTTTATCTTTTGTTGTGAAAATAGTTTATACATGAGCACTTATGTGAAAAGTATTGATGCTGCAAACACTTAATTAAGTGGTTTATCCAAACAATAAGTAATAACTATGAGAAATGTAATATTTAGTACTTCTTTAATTTTGAACAGGATGCTCATTGTGCGGCGGAGAAAGCCTACGGAATGTCAAAGAAGGATGAACTGGTGAATAAAGTAGCAGCTGCAGCTAATAAAGCAGCAAATGCAGCTAGAGTTGCAGCTGTGAAGGCTGTGCAAAATAGTATGCACCGTGATTACAATGTTCAATGA

Protein sequence

>MS.gene61254.t1

MRHLNKSDSEIGKENFNLSSDFTHFSIQVTPHHFHHEQRFSSNTPSSPSHTPTHNKTHQNKPSFTIPFTSKFQSFKLLTRFHFIIFISLTSLYFLFSHPTLLDFLFVLLFSSAIFVSINLFFSRSLNNKLSSSDSHHQRVVWSIGSKDEELKSLNSGSWVQVYSNGDVYEGEFHKGKCSGSGVYHFHMSGRFEGDWIDGKYDGFGVETWARGSRYRGQYRKGLRHGIGIYRFFGGDVYTGEWCNGQCHGFGVHTCNDGSHYVGEFKWGVKHGLGRYHFRNGDIYAGEYFADMMHGFGVYQFQNGHRYEGAWHEGRRQGLGMYTFRNGETQCGHWQNGILDNPKKQDSHIGSPCAVDHAKVFKAVQDAHCAAEKAYGMSKKDELVNKVAAAANKAANAARVAAVKAVQNSMHRDYNVQ