Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61254.t1 | XP_013457568.1 | 91.5 | 423 | 30 | 1 | 1 | 417 | 3 | 425 | 6.00E-112 | 414.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61254.t1 | A0A072UP26 | 91.5 | 423 | 30 | 1 | 1 | 417 | 3 | 425 | 4.3e-112 | 414.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04920 | MS.gene61254 | 0.805114 | 1.56E-49 | -1.69E-46 |
MS.gene049283 | MS.gene61254 | 0.820375 | 7.09E-53 | -1.69E-46 |
MS.gene049499 | MS.gene61254 | 0.808096 | 3.66E-50 | -1.69E-46 |
MS.gene049580 | MS.gene61254 | 0.808062 | 3.72E-50 | -1.69E-46 |
MS.gene049680 | MS.gene61254 | 0.819369 | 1.20E-52 | -1.69E-46 |
MS.gene050646 | MS.gene61254 | 0.806986 | 6.30E-50 | -1.69E-46 |
MS.gene050752 | MS.gene61254 | 0.802876 | 4.56E-49 | -1.69E-46 |
MS.gene050945 | MS.gene61254 | 0.868521 | 6.14E-66 | -1.69E-46 |
MS.gene050955 | MS.gene61254 | 0.803594 | 3.24E-49 | -1.69E-46 |
MS.gene051043 | MS.gene61254 | 0.822515 | 2.27E-53 | -1.69E-46 |
MS.gene051154 | MS.gene61254 | 0.819226 | 1.30E-52 | -1.69E-46 |
MS.gene051343 | MS.gene61254 | 0.820477 | 6.72E-53 | -1.69E-46 |
MS.gene051676 | MS.gene61254 | 0.816011 | 6.89E-52 | -1.69E-46 |
MS.gene051699 | MS.gene61254 | 0.87406 | 9.07E-68 | -1.69E-46 |
MS.gene051731 | MS.gene61254 | 0.804008 | 2.65E-49 | -1.69E-46 |
MS.gene051832 | MS.gene61254 | 0.822393 | 2.43E-53 | -1.69E-46 |
MS.gene051902 | MS.gene61254 | 0.812093 | 5.04E-51 | -1.69E-46 |
MS.gene051903 | MS.gene61254 | 0.806473 | 8.09E-50 | -1.69E-46 |
MS.gene051959 | MS.gene61254 | 0.804183 | 2.44E-49 | -1.69E-46 |
MS.gene051960 | MS.gene61254 | 0.801608 | 8.31E-49 | -1.69E-46 |
MS.gene051975 | MS.gene61254 | 0.807457 | 5.01E-50 | -1.69E-46 |
MS.gene052072 | MS.gene61254 | 0.813928 | 2.00E-51 | -1.69E-46 |
MS.gene052239 | MS.gene61254 | -0.803807 | 2.92E-49 | -1.69E-46 |
MS.gene052242 | MS.gene61254 | -0.812977 | 3.23E-51 | -1.69E-46 |
MS.gene052296 | MS.gene61254 | 0.819366 | 1.21E-52 | -1.69E-46 |
MS.gene052533 | MS.gene61254 | 0.805918 | 1.06E-49 | -1.69E-46 |
MS.gene052793 | MS.gene61254 | 0.835226 | 1.90E-56 | -1.69E-46 |
MS.gene052947 | MS.gene61254 | 0.812346 | 4.44E-51 | -1.69E-46 |
MS.gene053045 | MS.gene61254 | 0.809993 | 1.44E-50 | -1.69E-46 |
MS.gene053189 | MS.gene61254 | 0.839355 | 1.66E-57 | -1.69E-46 |
MS.gene053340 | MS.gene61254 | 0.800313 | 1.53E-48 | -1.69E-46 |
MS.gene053401 | MS.gene61254 | 0.824866 | 6.40E-54 | -1.69E-46 |
MS.gene053564 | MS.gene61254 | 0.811428 | 7.04E-51 | -1.69E-46 |
MS.gene053879 | MS.gene61254 | 0.816054 | 6.74E-52 | -1.69E-46 |
MS.gene053963 | MS.gene61254 | 0.852352 | 4.89E-61 | -1.69E-46 |
MS.gene054222 | MS.gene61254 | 0.835322 | 1.79E-56 | -1.69E-46 |
MS.gene054403 | MS.gene61254 | 0.809341 | 1.99E-50 | -1.69E-46 |
MS.gene054413 | MS.gene61254 | 0.836367 | 9.76E-57 | -1.69E-46 |
MS.gene054536 | MS.gene61254 | 0.800064 | 1.72E-48 | -1.69E-46 |
MS.gene05469 | MS.gene61254 | 0.820661 | 6.10E-53 | -1.69E-46 |
MS.gene054893 | MS.gene61254 | 0.803506 | 3.37E-49 | -1.69E-46 |
MS.gene055150 | MS.gene61254 | 0.824082 | 9.79E-54 | -1.69E-46 |
MS.gene05548 | MS.gene61254 | 0.809605 | 1.74E-50 | -1.69E-46 |
MS.gene056677 | MS.gene61254 | 0.810944 | 8.96E-51 | -1.69E-46 |
MS.gene05689 | MS.gene61254 | 0.806539 | 7.83E-50 | -1.69E-46 |
MS.gene056986 | MS.gene61254 | 0.813666 | 2.28E-51 | -1.69E-46 |
MS.gene057102 | MS.gene61254 | 0.840179 | 1.02E-57 | -1.69E-46 |
MS.gene057622 | MS.gene61254 | 0.80017 | 1.63E-48 | -1.69E-46 |
MS.gene057694 | MS.gene61254 | 0.821134 | 4.74E-53 | -1.69E-46 |
MS.gene057705 | MS.gene61254 | 0.815611 | 8.46E-52 | -1.69E-46 |
MS.gene057999 | MS.gene61254 | 0.838319 | 3.09E-57 | -1.69E-46 |
MS.gene058074 | MS.gene61254 | 0.864999 | 8.11E-65 | -1.69E-46 |
MS.gene058159 | MS.gene61254 | 0.822053 | 2.91E-53 | -1.69E-46 |
MS.gene058592 | MS.gene61254 | 0.827783 | 1.29E-54 | -1.69E-46 |
MS.gene05952 | MS.gene61254 | 0.843402 | 1.43E-58 | -1.69E-46 |
MS.gene05985 | MS.gene61254 | -0.86244 | 5.06E-64 | -1.69E-46 |
MS.gene06018 | MS.gene61254 | 0.819233 | 1.29E-52 | -1.69E-46 |
MS.gene060244 | MS.gene61254 | 0.831164 | 1.95E-55 | -1.69E-46 |
MS.gene060365 | MS.gene61254 | 0.833019 | 6.78E-56 | -1.69E-46 |
MS.gene060763 | MS.gene61254 | 0.800509 | 1.39E-48 | -1.69E-46 |
MS.gene060933 | MS.gene61254 | 0.818738 | 1.68E-52 | -1.69E-46 |
MS.gene060935 | MS.gene61254 | 0.809092 | 2.25E-50 | -1.69E-46 |
MS.gene060937 | MS.gene61254 | 0.822585 | 2.19E-53 | -1.69E-46 |
MS.gene061100 | MS.gene61254 | 0.806055 | 9.90E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61254.t1 | MTR_4g099180 | 96.690 | 423 | 8 | 1 | 1 | 417 | 3 | 425 | 0.0 | 848 |
MS.gene61254.t1 | MTR_4g099180 | 95.105 | 286 | 8 | 1 | 1 | 280 | 3 | 288 | 0.0 | 557 |
MS.gene61254.t1 | MTR_4g099180 | 95.439 | 285 | 7 | 1 | 1 | 279 | 3 | 287 | 0.0 | 556 |
MS.gene61254.t1 | MTR_7g451440 | 56.637 | 452 | 148 | 8 | 3 | 415 | 2 | 444 | 4.91e-154 | 443 |
MS.gene61254.t1 | MTR_8g007500 | 68.340 | 259 | 81 | 1 | 160 | 417 | 193 | 451 | 2.45e-117 | 350 |
MS.gene61254.t1 | MTR_3g072650 | 51.786 | 336 | 130 | 6 | 84 | 410 | 109 | 421 | 1.47e-101 | 308 |
MS.gene61254.t1 | MTR_5g058920 | 53.079 | 341 | 113 | 7 | 99 | 410 | 111 | 433 | 4.36e-101 | 308 |
MS.gene61254.t1 | MTR_3g072650 | 54.478 | 268 | 100 | 5 | 84 | 342 | 109 | 363 | 8.92e-97 | 295 |
MS.gene61254.t1 | MTR_8g080860 | 37.500 | 200 | 102 | 2 | 161 | 337 | 13 | 212 | 1.10e-30 | 119 |
MS.gene61254.t1 | MTR_8g080860 | 33.168 | 202 | 112 | 1 | 162 | 340 | 37 | 238 | 6.12e-27 | 109 |
MS.gene61254.t1 | MTR_8g080860 | 37.654 | 162 | 101 | 0 | 160 | 321 | 104 | 265 | 4.68e-26 | 107 |
MS.gene61254.t1 | MTR_8g080860 | 35.227 | 176 | 114 | 0 | 164 | 339 | 85 | 260 | 1.13e-25 | 105 |
MS.gene61254.t1 | MTR_8g080860 | 32.824 | 131 | 88 | 0 | 210 | 340 | 16 | 146 | 6.38e-17 | 80.9 |
MS.gene61254.t1 | MTR_8g080860 | 37.500 | 200 | 102 | 2 | 161 | 337 | 17 | 216 | 1.15e-30 | 119 |
MS.gene61254.t1 | MTR_8g080860 | 33.168 | 202 | 112 | 1 | 162 | 340 | 41 | 242 | 6.24e-27 | 109 |
MS.gene61254.t1 | MTR_8g080860 | 37.654 | 162 | 101 | 0 | 160 | 321 | 108 | 269 | 4.86e-26 | 107 |
MS.gene61254.t1 | MTR_8g080860 | 35.227 | 176 | 114 | 0 | 164 | 339 | 89 | 264 | 1.19e-25 | 105 |
MS.gene61254.t1 | MTR_8g080860 | 32.824 | 131 | 88 | 0 | 210 | 340 | 20 | 150 | 6.80e-17 | 80.9 |
MS.gene61254.t1 | MTR_8g088930 | 35.955 | 178 | 114 | 0 | 163 | 340 | 12 | 189 | 2.94e-29 | 120 |
MS.gene61254.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 204 | 340 | 7 | 143 | 2.80e-19 | 90.9 |
MS.gene61254.t1 | MTR_8g088930 | 36.364 | 143 | 83 | 2 | 140 | 277 | 56 | 195 | 1.25e-14 | 76.3 |
MS.gene61254.t1 | MTR_8g088930 | 35.955 | 178 | 114 | 0 | 163 | 340 | 12 | 189 | 2.99e-29 | 120 |
MS.gene61254.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 204 | 340 | 7 | 143 | 2.88e-19 | 90.9 |
MS.gene61254.t1 | MTR_8g088930 | 36.364 | 143 | 83 | 2 | 140 | 277 | 56 | 195 | 1.29e-14 | 76.3 |
MS.gene61254.t1 | MTR_8g088930 | 35.955 | 178 | 114 | 0 | 163 | 340 | 12 | 189 | 3.83e-29 | 120 |
MS.gene61254.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 204 | 340 | 7 | 143 | 3.90e-19 | 90.1 |
MS.gene61254.t1 | MTR_8g088930 | 36.364 | 143 | 83 | 2 | 140 | 277 | 56 | 195 | 1.47e-14 | 76.3 |
MS.gene61254.t1 | MTR_8g088930 | 35.955 | 178 | 114 | 0 | 163 | 340 | 12 | 189 | 3.86e-29 | 120 |
MS.gene61254.t1 | MTR_8g088930 | 35.036 | 137 | 89 | 0 | 204 | 340 | 7 | 143 | 4.07e-19 | 90.1 |
MS.gene61254.t1 | MTR_8g088930 | 36.364 | 143 | 83 | 2 | 140 | 277 | 56 | 195 | 1.45e-14 | 76.3 |
MS.gene61254.t1 | MTR_8g092090 | 34.653 | 202 | 101 | 2 | 163 | 333 | 8 | 209 | 5.12e-27 | 108 |
MS.gene61254.t1 | MTR_8g092090 | 36.478 | 159 | 101 | 0 | 152 | 310 | 74 | 232 | 3.83e-23 | 97.8 |
MS.gene61254.t1 | MTR_8g092090 | 30.178 | 169 | 87 | 2 | 203 | 340 | 2 | 170 | 7.89e-13 | 68.6 |
MS.gene61254.t1 | MTR_4g107460 | 33.333 | 210 | 116 | 2 | 154 | 339 | 22 | 231 | 2.02e-26 | 108 |
MS.gene61254.t1 | MTR_4g107460 | 34.270 | 178 | 116 | 1 | 164 | 340 | 9 | 186 | 1.49e-22 | 98.2 |
MS.gene61254.t1 | MTR_4g107460 | 31.148 | 183 | 123 | 1 | 152 | 331 | 90 | 272 | 1.91e-19 | 89.4 |
MS.gene61254.t1 | MTR_1g050740 | 33.702 | 181 | 120 | 0 | 161 | 341 | 58 | 238 | 4.99e-26 | 111 |
MS.gene61254.t1 | MTR_1g050740 | 32.609 | 184 | 121 | 1 | 162 | 345 | 82 | 262 | 4.89e-20 | 93.2 |
MS.gene61254.t1 | MTR_3g073100 | 35.838 | 173 | 110 | 1 | 165 | 336 | 58 | 230 | 2.64e-25 | 108 |
MS.gene61254.t1 | MTR_3g073100 | 37.931 | 116 | 72 | 0 | 225 | 340 | 73 | 188 | 3.51e-18 | 87.4 |
MS.gene61254.t1 | MTR_8g039100 | 27.668 | 253 | 165 | 3 | 161 | 395 | 50 | 302 | 6.40e-25 | 107 |
MS.gene61254.t1 | MTR_8g039100 | 35.862 | 145 | 92 | 1 | 197 | 340 | 39 | 183 | 3.21e-18 | 87.4 |
MS.gene61254.t1 | MTR_5g459450 | 35.928 | 167 | 107 | 0 | 161 | 327 | 66 | 232 | 1.13e-24 | 107 |
MS.gene61254.t1 | MTR_5g459450 | 36.719 | 128 | 81 | 0 | 212 | 339 | 71 | 198 | 5.83e-19 | 89.7 |
MS.gene61254.t1 | MTR_5g459450 | 33.019 | 106 | 71 | 0 | 235 | 340 | 71 | 176 | 4.64e-12 | 68.6 |
MS.gene61254.t1 | MTR_3g097260 | 37.209 | 172 | 108 | 0 | 165 | 336 | 56 | 227 | 1.44e-24 | 106 |
MS.gene61254.t1 | MTR_3g097260 | 34.109 | 129 | 85 | 0 | 163 | 291 | 100 | 228 | 4.17e-15 | 77.8 |
MS.gene61254.t1 | MTR_3g097260 | 36.719 | 128 | 81 | 0 | 212 | 339 | 57 | 184 | 2.77e-12 | 68.9 |
MS.gene61254.t1 | MTR_7g089950 | 32.370 | 173 | 117 | 0 | 161 | 333 | 68 | 240 | 7.36e-24 | 104 |
MS.gene61254.t1 | MTR_8g095240 | 33.163 | 196 | 113 | 4 | 163 | 343 | 118 | 310 | 5.23e-22 | 97.8 |
MS.gene61254.t1 | MTR_8g095240 | 30.303 | 231 | 118 | 4 | 153 | 340 | 30 | 260 | 5.75e-22 | 97.8 |
MS.gene61254.t1 | MTR_8g095240 | 34.706 | 170 | 108 | 2 | 160 | 326 | 171 | 340 | 6.98e-20 | 91.7 |
MS.gene61254.t1 | MTR_8g095240 | 31.383 | 188 | 119 | 1 | 161 | 338 | 1 | 188 | 7.18e-20 | 91.7 |
MS.gene61254.t1 | MTR_3g014650 | 32.432 | 185 | 109 | 2 | 161 | 345 | 86 | 254 | 1.26e-21 | 97.8 |
MS.gene61254.t1 | MTR_3g014650 | 27.545 | 167 | 118 | 1 | 156 | 322 | 95 | 258 | 3.93e-14 | 74.7 |
MS.gene61254.t1 | MTR_1g062740 | 30.049 | 203 | 134 | 2 | 162 | 356 | 72 | 274 | 4.45e-21 | 96.3 |
MS.gene61254.t1 | MTR_1g062740 | 31.818 | 176 | 120 | 0 | 165 | 340 | 52 | 227 | 2.76e-20 | 94.0 |
MS.gene61254.t1 | MTR_1g062740 | 29.592 | 196 | 131 | 3 | 151 | 339 | 8 | 203 | 3.34e-18 | 87.4 |
MS.gene61254.t1 | MTR_8g095170 | 34.568 | 162 | 105 | 1 | 164 | 324 | 30 | 191 | 4.59e-21 | 95.9 |
MS.gene61254.t1 | MTR_8g095170 | 39.130 | 115 | 70 | 0 | 225 | 339 | 46 | 160 | 2.70e-17 | 84.7 |
MS.gene61254.t1 | MTR_8g095170 | 34.568 | 162 | 105 | 1 | 164 | 324 | 30 | 191 | 8.35e-21 | 95.1 |
MS.gene61254.t1 | MTR_8g095170 | 39.130 | 115 | 70 | 0 | 225 | 339 | 46 | 160 | 4.59e-17 | 83.6 |
MS.gene61254.t1 | MTR_8g080340 | 40.336 | 119 | 71 | 0 | 203 | 321 | 35 | 153 | 3.83e-20 | 87.4 |
MS.gene61254.t1 | MTR_8g080340 | 34.959 | 123 | 80 | 0 | 215 | 337 | 24 | 146 | 2.34e-16 | 77.0 |
MS.gene61254.t1 | MTR_8g080310 | 35.556 | 135 | 87 | 0 | 206 | 340 | 6 | 140 | 2.94e-19 | 84.7 |
MS.gene61254.t1 | MTR_8g080310 | 31.579 | 152 | 104 | 0 | 160 | 311 | 6 | 157 | 2.03e-16 | 76.6 |
MS.gene61254.t1 | MTR_6g043150 | 32.804 | 189 | 104 | 1 | 164 | 329 | 79 | 267 | 1.44e-18 | 86.7 |
MS.gene61254.t1 | MTR_6g043150 | 35.227 | 176 | 112 | 2 | 160 | 334 | 6 | 180 | 4.91e-18 | 85.1 |
MS.gene61254.t1 | MTR_6g043150 | 36.306 | 157 | 100 | 0 | 162 | 318 | 169 | 325 | 1.99e-17 | 83.2 |
MS.gene61254.t1 | MTR_6g043150 | 34.074 | 135 | 89 | 0 | 204 | 338 | 4 | 138 | 2.46e-15 | 77.0 |
MS.gene61254.t1 | MTR_2g078470 | 31.217 | 189 | 107 | 1 | 164 | 329 | 148 | 336 | 3.00e-18 | 86.3 |
MS.gene61254.t1 | MTR_2g078470 | 32.386 | 176 | 119 | 0 | 164 | 339 | 79 | 254 | 1.60e-16 | 80.9 |
MS.gene61254.t1 | MTR_2g078470 | 32.143 | 168 | 114 | 0 | 162 | 329 | 100 | 267 | 4.29e-16 | 79.7 |
MS.gene61254.t1 | MTR_2g078470 | 30.729 | 192 | 110 | 1 | 161 | 329 | 7 | 198 | 5.50e-16 | 79.3 |
MS.gene61254.t1 | MTR_2g078470 | 34.722 | 144 | 94 | 0 | 164 | 307 | 217 | 360 | 3.10e-13 | 71.2 |
MS.gene61254.t1 | MTR_5g010840 | 32.955 | 176 | 110 | 1 | 164 | 339 | 181 | 348 | 1.02e-16 | 81.6 |
MS.gene61254.t1 | MTR_5g010840 | 30.939 | 181 | 110 | 2 | 162 | 327 | 133 | 313 | 5.85e-15 | 76.6 |
MS.gene61254.t1 | MTR_5g010840 | 32.911 | 158 | 105 | 1 | 153 | 309 | 207 | 364 | 2.87e-13 | 71.2 |
MS.gene61254.t1 | MTR_5g010840 | 30.303 | 165 | 107 | 1 | 162 | 326 | 202 | 358 | 3.09e-12 | 68.2 |
MS.gene61254.t1 | MTR_8g080350 | 36.441 | 118 | 73 | 1 | 192 | 309 | 87 | 202 | 3.27e-13 | 71.2 |
MS.gene61254.t1 | MTR_8g080350 | 24.436 | 266 | 135 | 6 | 154 | 363 | 116 | 371 | 1.36e-12 | 69.3 |
MS.gene61254.t1 | MTR_8g080350 | 34.615 | 130 | 82 | 2 | 215 | 343 | 87 | 214 | 1.52e-12 | 68.9 |
MS.gene61254.t1 | MTR_8g092410 | 31.210 | 157 | 95 | 4 | 204 | 356 | 135 | 282 | 5.49e-13 | 70.5 |
MS.gene61254.t1 | MTR_8g092410 | 27.528 | 178 | 97 | 3 | 114 | 265 | 112 | 283 | 6.42e-12 | 67.0 |
MS.gene61254.t1 | MTR_3g023310 | 33.871 | 124 | 69 | 1 | 203 | 326 | 12 | 122 | 5.03e-12 | 64.7 |
MS.gene61254.t1 | MTR_3g023310 | 36.893 | 103 | 55 | 1 | 248 | 340 | 11 | 113 | 6.77e-12 | 64.3 |
MS.gene61254.t1 | MTR_1g112280 | 29.787 | 141 | 99 | 0 | 206 | 346 | 609 | 749 | 2.69e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61254.t1 | AT4G17080 | 57.398 | 392 | 129 | 5 | 40 | 408 | 125 | 501 | 1.53e-141 | 414 |
MS.gene61254.t1 | AT2G35170 | 58.235 | 340 | 119 | 6 | 68 | 384 | 107 | 446 | 5.61e-131 | 386 |
MS.gene61254.t1 | AT1G21920 | 54.180 | 323 | 132 | 3 | 94 | 410 | 98 | 410 | 9.07e-102 | 309 |
MS.gene61254.t1 | AT1G21920 | 57.540 | 252 | 101 | 2 | 94 | 339 | 98 | 349 | 1.99e-98 | 298 |
MS.gene61254.t1 | AT1G77660 | 54.180 | 323 | 129 | 6 | 97 | 410 | 102 | 414 | 3.33e-96 | 295 |
MS.gene61254.t1 | AT1G21980 | 37.059 | 170 | 107 | 0 | 165 | 334 | 77 | 246 | 4.81e-28 | 117 |
MS.gene61254.t1 | AT1G21980 | 37.500 | 128 | 80 | 0 | 212 | 339 | 78 | 205 | 3.88e-19 | 90.5 |
MS.gene61254.t1 | AT1G21980 | 30.370 | 135 | 93 | 1 | 163 | 296 | 121 | 255 | 8.89e-12 | 67.4 |
MS.gene61254.t1 | AT2G41210 | 36.207 | 174 | 111 | 0 | 161 | 334 | 67 | 240 | 1.37e-27 | 115 |
MS.gene61254.t1 | AT2G41210 | 38.281 | 128 | 79 | 0 | 212 | 339 | 72 | 199 | 1.81e-20 | 94.4 |
MS.gene61254.t1 | AT1G77740 | 35.882 | 170 | 109 | 0 | 165 | 334 | 78 | 247 | 8.73e-27 | 113 |
MS.gene61254.t1 | AT1G77740 | 36.719 | 128 | 81 | 0 | 212 | 339 | 79 | 206 | 9.75e-18 | 85.9 |
MS.gene61254.t1 | AT1G77740 | 33.962 | 106 | 70 | 0 | 235 | 340 | 79 | 184 | 3.62e-11 | 65.5 |
MS.gene61254.t1 | AT1G77740 | 35.882 | 170 | 109 | 0 | 165 | 334 | 78 | 247 | 8.73e-27 | 113 |
MS.gene61254.t1 | AT1G77740 | 36.719 | 128 | 81 | 0 | 212 | 339 | 79 | 206 | 9.75e-18 | 85.9 |
MS.gene61254.t1 | AT1G77740 | 33.962 | 106 | 70 | 0 | 235 | 340 | 79 | 184 | 3.62e-11 | 65.5 |
MS.gene61254.t1 | AT3G56960 | 32.955 | 176 | 118 | 0 | 161 | 336 | 69 | 244 | 1.06e-26 | 113 |
MS.gene61254.t1 | AT3G56960 | 36.719 | 128 | 81 | 0 | 212 | 339 | 74 | 201 | 7.48e-20 | 92.4 |
MS.gene61254.t1 | AT3G56960 | 32.955 | 176 | 118 | 0 | 161 | 336 | 69 | 244 | 1.06e-26 | 113 |
MS.gene61254.t1 | AT3G56960 | 36.719 | 128 | 81 | 0 | 212 | 339 | 74 | 201 | 7.48e-20 | 92.4 |
MS.gene61254.t1 | AT1G60890 | 34.270 | 178 | 94 | 1 | 161 | 338 | 8 | 162 | 3.64e-25 | 108 |
MS.gene61254.t1 | AT1G60890 | 34.118 | 170 | 112 | 0 | 153 | 322 | 23 | 192 | 1.98e-24 | 106 |
MS.gene61254.t1 | AT1G60890 | 34.513 | 113 | 74 | 0 | 165 | 277 | 81 | 193 | 1.24e-12 | 70.1 |
MS.gene61254.t1 | AT1G60890 | 34.270 | 178 | 94 | 1 | 161 | 338 | 20 | 174 | 3.85e-25 | 108 |
MS.gene61254.t1 | AT1G60890 | 34.783 | 161 | 105 | 0 | 162 | 322 | 44 | 204 | 2.38e-24 | 106 |
MS.gene61254.t1 | AT1G60890 | 34.513 | 113 | 74 | 0 | 165 | 277 | 93 | 205 | 1.48e-12 | 70.1 |
MS.gene61254.t1 | AT2G26420 | 34.392 | 189 | 120 | 2 | 161 | 349 | 50 | 234 | 6.98e-25 | 107 |
MS.gene61254.t1 | AT2G26420 | 34.392 | 189 | 120 | 2 | 161 | 349 | 50 | 234 | 7.78e-25 | 107 |
MS.gene61254.t1 | AT2G26420 | 34.392 | 189 | 120 | 2 | 161 | 349 | 50 | 234 | 7.78e-25 | 107 |
MS.gene61254.t1 | AT1G10900 | 35.625 | 160 | 103 | 0 | 163 | 322 | 33 | 192 | 4.22e-24 | 105 |
MS.gene61254.t1 | AT1G10900 | 34.831 | 178 | 116 | 0 | 163 | 340 | 10 | 187 | 1.07e-23 | 104 |
MS.gene61254.t1 | AT1G10900 | 30.769 | 156 | 85 | 1 | 205 | 337 | 6 | 161 | 1.82e-15 | 79.0 |
MS.gene61254.t1 | AT1G10900 | 32.639 | 144 | 89 | 2 | 139 | 277 | 53 | 193 | 4.55e-12 | 68.6 |
MS.gene61254.t1 | AT1G10900 | 35.625 | 160 | 103 | 0 | 163 | 322 | 33 | 192 | 4.22e-24 | 105 |
MS.gene61254.t1 | AT1G10900 | 34.831 | 178 | 116 | 0 | 163 | 340 | 10 | 187 | 1.07e-23 | 104 |
MS.gene61254.t1 | AT1G10900 | 30.769 | 156 | 85 | 1 | 205 | 337 | 6 | 161 | 1.82e-15 | 79.0 |
MS.gene61254.t1 | AT1G10900 | 32.639 | 144 | 89 | 2 | 139 | 277 | 53 | 193 | 4.55e-12 | 68.6 |
MS.gene61254.t1 | AT1G10900 | 35.625 | 160 | 103 | 0 | 163 | 322 | 33 | 192 | 4.22e-24 | 105 |
MS.gene61254.t1 | AT1G10900 | 34.831 | 178 | 116 | 0 | 163 | 340 | 10 | 187 | 1.07e-23 | 104 |
MS.gene61254.t1 | AT1G10900 | 30.769 | 156 | 85 | 1 | 205 | 337 | 6 | 161 | 1.82e-15 | 79.0 |
MS.gene61254.t1 | AT1G10900 | 32.639 | 144 | 89 | 2 | 139 | 277 | 53 | 193 | 4.55e-12 | 68.6 |
MS.gene61254.t1 | AT3G07960 | 32.258 | 186 | 122 | 1 | 161 | 346 | 24 | 205 | 6.59e-24 | 104 |
MS.gene61254.t1 | AT3G07960 | 32.258 | 186 | 122 | 1 | 161 | 346 | 24 | 205 | 7.71e-24 | 104 |
MS.gene61254.t1 | AT3G07960 | 32.258 | 186 | 122 | 1 | 161 | 346 | 24 | 205 | 7.71e-24 | 104 |
MS.gene61254.t1 | AT3G07960 | 32.258 | 186 | 122 | 1 | 161 | 346 | 24 | 205 | 8.88e-24 | 104 |
MS.gene61254.t1 | AT3G09920 | 27.413 | 259 | 167 | 2 | 146 | 392 | 23 | 272 | 1.10e-21 | 98.2 |
MS.gene61254.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 162 | 360 | 74 | 278 | 5.67e-21 | 95.9 |
MS.gene61254.t1 | AT3G09920 | 27.413 | 259 | 167 | 2 | 146 | 392 | 23 | 272 | 1.10e-21 | 98.2 |
MS.gene61254.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 162 | 360 | 74 | 278 | 5.67e-21 | 95.9 |
MS.gene61254.t1 | AT3G09920 | 27.413 | 259 | 167 | 2 | 146 | 392 | 23 | 272 | 1.10e-21 | 98.2 |
MS.gene61254.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 162 | 360 | 74 | 278 | 5.67e-21 | 95.9 |
MS.gene61254.t1 | AT3G09920 | 27.413 | 259 | 167 | 2 | 146 | 392 | 23 | 272 | 1.10e-21 | 98.2 |
MS.gene61254.t1 | AT3G09920 | 29.808 | 208 | 134 | 3 | 162 | 360 | 74 | 278 | 5.67e-21 | 95.9 |
Find 97 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATTAGGACGGTACCATTTC+AGG | 0.220617 | 8.2:+22995044 | MS.gene61254:CDS |
CTTGAAAGATTGAAACTTTG+AGG | 0.305718 | 8.2:-22994435 | None:intergenic |
AGAGCTTAAATTCTGGATCT+TGG | 0.306677 | 8.2:+22994684 | MS.gene61254:CDS |
CAACGTGTTGTATGGTCAAT+TGG | 0.311671 | 8.2:+22994641 | MS.gene61254:CDS |
TTTGAAGGTGATTGGATTGA+TGG | 0.327944 | 8.2:+22994803 | MS.gene61254:CDS |
AACAAATCTGATTCTGAAAT+CGG | 0.341623 | 8.2:+22994242 | MS.gene61254:CDS |
TTTGGTGGTGATGTTTATAC+TGG | 0.359699 | 8.2:+22994926 | MS.gene61254:CDS |
GAGAAAGTAAAGAGAGGTTA+AGG | 0.372259 | 8.2:-22994492 | None:intergenic |
GAGCTTAAATTCTGGATCTT+GGG | 0.376585 | 8.2:+22994685 | MS.gene61254:CDS |
CATATGAGTGGAAGATTTGA+AGG | 0.378466 | 8.2:+22994788 | MS.gene61254:CDS |
AAGGGTTTGAGGCATGGAAT+TGG | 0.379850 | 8.2:+22994890 | MS.gene61254:CDS |
GATTGAAACTTTGAGGTAAA+GGG | 0.380834 | 8.2:-22994428 | None:intergenic |
TTTCATAAGGGGAAGTGCTC+AGG | 0.382882 | 8.2:+22994746 | MS.gene61254:CDS |
ATTATGTTGGGGAATTCAAA+TGG | 0.385157 | 8.2:+22995008 | MS.gene61254:CDS |
TTTCAGAATCAGATTTGTTA+AGG | 0.386777 | 8.2:-22994238 | None:intergenic |
TCAACGATCTTGAGAAGAAT+AGG | 0.388984 | 8.2:-22994586 | None:intergenic |
GTGGAAGATTTGAAGGTGAT+TGG | 0.394569 | 8.2:+22994795 | MS.gene61254:CDS |
TGGGGTGTTAAACATGGATT+AGG | 0.409371 | 8.2:+22995028 | MS.gene61254:CDS |
GGCATGGAATTGGAATTTAT+AGG | 0.412594 | 8.2:+22994900 | MS.gene61254:CDS |
GGAGTTCATACTTGCAATGA+TGG | 0.416556 | 8.2:+22994980 | MS.gene61254:CDS |
AAAAGCAAGACAGTCATATT+GGG | 0.421127 | 8.2:+22996456 | MS.gene61254:CDS |
AATGGTCAGTGTCATGGCTT+TGG | 0.421143 | 8.2:+22994959 | MS.gene61254:CDS |
TATGAAGGTGAGTTTCATAA+GGG | 0.426937 | 8.2:+22994734 | MS.gene61254:CDS |
GAGTTAAAGAGCTTAAATTC+TGG | 0.427388 | 8.2:+22994677 | MS.gene61254:CDS |
GCGGATATGATGCATGGCTT+TGG | 0.433142 | 8.2:+22996296 | MS.gene61254:CDS |
TGCTTGAGAAGCGTTGTTCA+TGG | 0.439654 | 8.2:-22994334 | None:intergenic |
TTATGAAGGTGAGTTTCATA+AGG | 0.441190 | 8.2:+22994733 | MS.gene61254:CDS |
AGTGTGGTCACTGGCAGAAT+GGG | 0.442429 | 8.2:+22996417 | MS.gene61254:CDS |
CATGCCACGCACCCTCATAT+CGG | 0.449588 | 8.2:-22996343 | None:intergenic |
TCAGAATGGTCACCGATATG+AGG | 0.450366 | 8.2:+22996331 | MS.gene61254:CDS |
CTCATCATCAACGTGTTGTA+TGG | 0.452247 | 8.2:+22994633 | MS.gene61254:CDS |
AGATTGAAACTTTGAGGTAA+AGG | 0.454037 | 8.2:-22994429 | None:intergenic |
GATGGAAAGTATGATGGGTT+TGG | 0.464094 | 8.2:+22994821 | MS.gene61254:CDS |
GAATAATAAGCTTTCTTCAT+CGG | 0.464931 | 8.2:+22994607 | MS.gene61254:CDS |
GTAGGTATCGTGGACAGTAT+AGG | 0.468147 | 8.2:+22994867 | MS.gene61254:CDS |
TTATGTTGGGGAATTCAAAT+GGG | 0.469276 | 8.2:+22995009 | MS.gene61254:CDS |
CAGTGTGGTCACTGGCAGAA+TGG | 0.474325 | 8.2:+22996416 | MS.gene61254:CDS |
AAGAGAAAATCAAGAAGAGT+TGG | 0.478692 | 8.2:-22994524 | None:intergenic |
GTAAAGGGTATTGTAAAAGA+AGG | 0.483157 | 8.2:-22994413 | None:intergenic |
TGGATTGATGGAAAGTATGA+TGG | 0.494170 | 8.2:+22994815 | MS.gene61254:CDS |
ATGATGGGAGTCATTATGTT+GGG | 0.495925 | 8.2:+22994996 | MS.gene61254:CDS |
AATGTCAAAGAAGGATGAAC+TGG | 0.498099 | 8.2:+22997174 | MS.gene61254:CDS |
TGAAGGAAGAAGACAAGGAC+TGG | 0.499777 | 8.2:+22996364 | MS.gene61254:CDS |
CTGGACAGCTTTGAAAACCT+TGG | 0.499930 | 8.2:-22996501 | None:intergenic |
GGTGTATGAGATGGTGAAGA+TGG | 0.507475 | 8.2:-22994362 | None:intergenic |
GGAGTCTATCAATTTCAGAA+TGG | 0.507486 | 8.2:+22996317 | MS.gene61254:CDS |
GAAAATGATGAGGAGTAACT+TGG | 0.509080 | 8.2:-22994310 | None:intergenic |
AACGTGTTGTATGGTCAATT+GGG | 0.513400 | 8.2:+22994642 | MS.gene61254:CDS |
TTCAAATGGGGTGTTAAACA+TGG | 0.513973 | 8.2:+22995022 | MS.gene61254:CDS |
TGGGTTCAAGTTTACAGCAA+TGG | 0.526362 | 8.2:+22994704 | MS.gene61254:CDS |
GTCAATTGGGTCAAAGGATG+AGG | 0.530313 | 8.2:+22994655 | MS.gene61254:CDS |
CATATCCGCAAAATATTCTC+CGG | 0.537617 | 8.2:-22996282 | None:intergenic |
TATAGGAAGGGTTTGAGGCA+TGG | 0.542708 | 8.2:+22994884 | MS.gene61254:CDS |
TATGAGGGTGCGTGGCATGA+AGG | 0.544188 | 8.2:+22996347 | MS.gene61254:CDS |
GTGATGTTTATACTGGTGAA+TGG | 0.551261 | 8.2:+22994933 | MS.gene61254:CDS |
GACAGTATAGGAAGGGTTTG+AGG | 0.555234 | 8.2:+22994879 | MS.gene61254:CDS |
GGGAAACACAGTGTGGTCAC+TGG | 0.556623 | 8.2:+22996408 | MS.gene61254:CDS |
TGAAAAGAGAAAGTAAAGAG+AGG | 0.558903 | 8.2:-22994498 | None:intergenic |
ATCCTTCTTTGACATTCCGT+AGG | 0.560605 | 8.2:-22997167 | None:intergenic |
ATCATTGAACATTGTAATCA+CGG | 0.560703 | 8.2:-22997279 | None:intergenic |
AAGGGGAAGTGCTCAGGGAG+TGG | 0.561581 | 8.2:+22994752 | MS.gene61254:CDS |
GAGTTCATACTTGCAATGAT+GGG | 0.567190 | 8.2:+22994981 | MS.gene61254:CDS |
AGCTAGAGTTGCAGCTGTGA+AGG | 0.569793 | 8.2:+22997237 | MS.gene61254:CDS |
TTCATAAGGGGAAGTGCTCA+GGG | 0.572490 | 8.2:+22994747 | MS.gene61254:CDS |
TATACTGGTGAATGGTGTAA+TGG | 0.573863 | 8.2:+22994941 | MS.gene61254:CDS |
AGCAATGGTGATGTTTATGA+AGG | 0.574309 | 8.2:+22994719 | MS.gene61254:CDS |
CAGAATGGTCACCGATATGA+GGG | 0.575287 | 8.2:+22996332 | MS.gene61254:CDS |
CAGCTTTGAAAACCTTGGCA+TGG | 0.579822 | 8.2:-22996496 | None:intergenic |
AGCCTACGGAATGTCAAAGA+AGG | 0.581674 | 8.2:+22997165 | MS.gene61254:CDS |
GGATTGATGGAAAGTATGAT+GGG | 0.582051 | 8.2:+22994816 | MS.gene61254:CDS |
ATGGGTTTGGTGTTGAAACG+TGG | 0.586936 | 8.2:+22994834 | MS.gene61254:CDS |
GGTGTTGAAACGTGGGCTAG+AGG | 0.588676 | 8.2:+22994842 | MS.gene61254:CDS |
TTGTGTGTAGGTGTATGAGA+TGG | 0.591599 | 8.2:-22994371 | None:intergenic |
TGTATGGTCAATTGGGTCAA+AGG | 0.595542 | 8.2:+22994649 | MS.gene61254:CDS |
AGAAATGGGGACATATATGC+CGG | 0.598656 | 8.2:+22996263 | MS.gene61254:intron |
AAACGTGGGCTAGAGGAAGT+AGG | 0.599270 | 8.2:+22994849 | MS.gene61254:CDS |
TGGTGTAATGGTCAGTGTCA+TGG | 0.600058 | 8.2:+22994953 | MS.gene61254:CDS |
GAAGGAAGAAGACAAGGACT+GGG | 0.603856 | 8.2:+22996365 | MS.gene61254:CDS |
GTATCGTGGACAGTATAGGA+AGG | 0.617143 | 8.2:+22994871 | MS.gene61254:CDS |
TGAACAGGATGCTCATTGTG+CGG | 0.617594 | 8.2:+22997135 | MS.gene61254:intron |
GTCACCGATATGAGGGTGCG+TGG | 0.630941 | 8.2:+22996339 | MS.gene61254:CDS |
AATGATGGGAGTCATTATGT+TGG | 0.635184 | 8.2:+22994995 | MS.gene61254:CDS |
TTGTTATTACTGCAGAAATG+GGG | 0.635687 | 8.2:+22996250 | MS.gene61254:intron |
TGATGGGAGTCATTATGTTG+GGG | 0.636425 | 8.2:+22994997 | MS.gene61254:CDS |
TGTGCGGCGGAGAAAGCCTA+CGG | 0.641747 | 8.2:+22997151 | MS.gene61254:CDS |
TTGGCATGGTCTACAGCACA+TGG | 0.645980 | 8.2:-22996482 | None:intergenic |
ATGTGCTGTAGACCATGCCA+AGG | 0.647382 | 8.2:+22996484 | MS.gene61254:CDS |
TATCGTGGACAGTATAGGAA+GGG | 0.648017 | 8.2:+22994872 | MS.gene61254:CDS |
TATGTTGGGGAATTCAAATG+GGG | 0.656507 | 8.2:+22995010 | MS.gene61254:CDS |
TGGCATGAAGGAAGAAGACA+AGG | 0.660942 | 8.2:+22996359 | MS.gene61254:CDS |
TGGGTTTGGTGTTGAAACGT+GGG | 0.670518 | 8.2:+22994835 | MS.gene61254:CDS |
ATGAAGGTGAGTTTCATAAG+GGG | 0.671828 | 8.2:+22994735 | MS.gene61254:CDS |
GCTAGAGGAAGTAGGTATCG+TGG | 0.672052 | 8.2:+22994857 | MS.gene61254:CDS |
GTGTTAAACATGGATTAGGA+CGG | 0.683306 | 8.2:+22995032 | MS.gene61254:CDS |
ACAGGATGCTCATTGTGCGG+CGG | 0.690381 | 8.2:+22997138 | MS.gene61254:intron |
TGTTCATGGTGAAAATGATG+AGG | 0.704077 | 8.2:-22994320 | None:intergenic |
AGAAACGGGGAAACACAGTG+TGG | 0.759758 | 8.2:+22996401 | MS.gene61254:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTACTTTTTATGAATTAAA+AGG | + | chr8.2:22996608-22996627 | MS.gene61254:intron | 10.0% |
!!! | TTACTTTTTATGAATTAAAA+GGG | + | chr8.2:22996609-22996628 | MS.gene61254:intron | 10.0% |
!!! | AAGAGAATTTACTTTTATTT+GGG | + | chr8.2:22995370-22995389 | MS.gene61254:intron | 15.0% |
!!! | CAAAGCTTTATATAAAAAAT+GGG | - | chr8.2:22995549-22995568 | None:intergenic | 15.0% |
!!! | TAAGAGAATTTACTTTTATT+TGG | + | chr8.2:22995369-22995388 | MS.gene61254:intron | 15.0% |
!! | AAGTAAAAAATGATGAAATC+AGG | - | chr8.2:22996758-22996777 | None:intergenic | 20.0% |
!! | AATACAGATAAAAATCAAAC+TGG | - | chr8.2:22995954-22995973 | None:intergenic | 20.0% |
!! | AGTAAAAAATGATGAAATCA+GGG | - | chr8.2:22996757-22996776 | None:intergenic | 20.0% |
!! | AGTTCAAAATTGTATTTAAG+TGG | - | chr8.2:22995200-22995219 | None:intergenic | 20.0% |
!! | ATGTCAATCAAATTGAATAA+TGG | - | chr8.2:22996129-22996148 | None:intergenic | 20.0% |
!! | CATAGTTATTACTTATTGTT+TGG | - | chr8.2:22997084-22997103 | None:intergenic | 20.0% |
!! | CTTAAAATGAACACAAAATT+GGG | - | chr8.2:22995353-22995372 | None:intergenic | 20.0% |
!! | TCTTAAAATGAACACAAAAT+TGG | - | chr8.2:22995354-22995373 | None:intergenic | 20.0% |
!! | TGTCAATCAAATTGAATAAT+GGG | - | chr8.2:22996128-22996147 | None:intergenic | 20.0% |
!!! | ATCATTTTTTACTTTCTTCT+TGG | + | chr8.2:22996764-22996783 | MS.gene61254:intron | 20.0% |
!!! | ATTGGAATTTATAGGTTTTT+TGG | + | chr8.2:22994908-22994927 | MS.gene61254:CDS | 20.0% |
!!! | CATGATTATATATTGTTTTG+AGG | + | chr8.2:22996647-22996666 | MS.gene61254:intron | 20.0% |
!!! | CCAAAGCTTTATATAAAAAA+TGG | - | chr8.2:22995550-22995569 | None:intergenic | 20.0% |
!!! | CCATTTTTTATATAAAGCTT+TGG | + | chr8.2:22995547-22995566 | MS.gene61254:intron | 20.0% |
!!! | TCATTTTTTACTTTCTTCTT+GGG | + | chr8.2:22996765-22996784 | MS.gene61254:intron | 20.0% |
! | AAAAAAGAACTAACCTGAAA+TGG | - | chr8.2:22995060-22995079 | None:intergenic | 25.0% |
! | AAACAGTCTTACAAATATGA+TGG | - | chr8.2:22996862-22996881 | None:intergenic | 25.0% |
! | ATCATATTTGTAAGACTGTT+TGG | + | chr8.2:22996861-22996880 | MS.gene61254:intron | 25.0% |
! | ATTCAAAAATGACTATTACC+TGG | - | chr8.2:22996523-22996542 | None:intergenic | 25.0% |
! | ATTTACTTTCAAAAGCCAAA+AGG | + | chr8.2:22995794-22995813 | MS.gene61254:intron | 25.0% |
! | CTAGCAATGTATAATGTAAT+TGG | + | chr8.2:22996151-22996170 | MS.gene61254:intron | 25.0% |
! | GAATAATAAGCTTTCTTCAT+CGG | + | chr8.2:22994607-22994626 | MS.gene61254:CDS | 25.0% |
! | GATTGAAAAATGAGTGAAAT+CGG | - | chr8.2:22994291-22994310 | None:intergenic | 25.0% |
! | TAAAATACTTGGAAAGTGAT+TGG | + | chr8.2:22995990-22996009 | MS.gene61254:intron | 25.0% |
! | TCATATTTGTAAGACTGTTT+GGG | + | chr8.2:22996862-22996881 | MS.gene61254:intron | 25.0% |
! | TGTATGTGTTTCTTCTAAAT+AGG | + | chr8.2:22995890-22995909 | MS.gene61254:intron | 25.0% |
! | TTATGTGAAAAACTACTGTA+AGG | + | chr8.2:22996584-22996603 | MS.gene61254:intron | 25.0% |
! | TTGTATCTAGCTAAAATACT+TGG | + | chr8.2:22995979-22995998 | MS.gene61254:intron | 25.0% |
! | TTTCATAAACTATCTTACAG+AGG | - | chr8.2:22996946-22996965 | None:intergenic | 25.0% |
!! | AGATTTGACATTATCTGTTT+TGG | + | chr8.2:22995225-22995244 | MS.gene61254:intron | 25.0% |
!! | GTTTATCATTTTCATATGAG+TGG | + | chr8.2:22994776-22994795 | MS.gene61254:CDS | 25.0% |
!!! | AAAAGAAGGTTTGTTTTGAT+GGG | - | chr8.2:22994402-22994421 | None:intergenic | 25.0% |
!!! | AACAAATCTGATTCTGAAAT+CGG | + | chr8.2:22994242-22994261 | MS.gene61254:CDS | 25.0% |
!!! | ATTTGTTATTACTGCAGAAA+TGG | + | chr8.2:22996248-22996267 | MS.gene61254:intron | 25.0% |
!!! | GATATTTATTTAGCTTTGGT+AGG | + | chr8.2:22995665-22995684 | MS.gene61254:intron | 25.0% |
!!! | GTACTTCTTTAATTTTGAAC+AGG | + | chr8.2:22997120-22997139 | MS.gene61254:intron | 25.0% |
!!! | TAAAAGAAGGTTTGTTTTGA+TGG | - | chr8.2:22994403-22994422 | None:intergenic | 25.0% |
!!! | TTTCAGAATCAGATTTGTTA+AGG | - | chr8.2:22994241-22994260 | None:intergenic | 25.0% |
!!! | TTTGTTATTACTGCAGAAAT+GGG | + | chr8.2:22996249-22996268 | MS.gene61254:intron | 25.0% |
AAAAAGCAAGACAGTCATAT+TGG | + | chr8.2:22996455-22996474 | MS.gene61254:CDS | 30.0% | |
AAAAGCAAGACAGTCATATT+GGG | + | chr8.2:22996456-22996475 | MS.gene61254:CDS | 30.0% | |
AAGAGAAAATCAAGAAGAGT+TGG | - | chr8.2:22994527-22994546 | None:intergenic | 30.0% | |
ATTAACCACGATTCAGTATT+TGG | + | chr8.2:22995833-22995852 | MS.gene61254:intron | 30.0% | |
ATTATGTTGGGGAATTCAAA+TGG | + | chr8.2:22995008-22995027 | MS.gene61254:CDS | 30.0% | |
CTTGAAAGATTGAAACTTTG+AGG | - | chr8.2:22994438-22994457 | None:intergenic | 30.0% | |
GAGTTAAAGAGCTTAAATTC+TGG | + | chr8.2:22994677-22994696 | MS.gene61254:CDS | 30.0% | |
GGTTGAGACATTATATAGTT+TGG | - | chr8.2:22995933-22995952 | None:intergenic | 30.0% | |
GTCAAATTCTTCACATATAG+TGG | + | chr8.2:22995507-22995526 | MS.gene61254:intron | 30.0% | |
TAATTGTGTCAATGTCAAGT+CGG | + | chr8.2:22995405-22995424 | MS.gene61254:intron | 30.0% | |
TATGAAGGTGAGTTTCATAA+GGG | + | chr8.2:22994734-22994753 | MS.gene61254:CDS | 30.0% | |
TGAAAAGAGAAAGTAAAGAG+AGG | - | chr8.2:22994501-22994520 | None:intergenic | 30.0% | |
TTATGAAGGTGAGTTTCATA+AGG | + | chr8.2:22994733-22994752 | MS.gene61254:CDS | 30.0% | |
TTATGTTGGGGAATTCAAAT+GGG | + | chr8.2:22995009-22995028 | MS.gene61254:CDS | 30.0% | |
! | GTATACTTTTCTGCTTTCAT+GGG | + | chr8.2:22995855-22995874 | MS.gene61254:intron | 30.0% |
! | TAACCATTCTGATAATGCTA+AGG | - | chr8.2:22995116-22995135 | None:intergenic | 30.0% |
! | TTGTTATTACTGCAGAAATG+GGG | + | chr8.2:22996250-22996269 | MS.gene61254:intron | 30.0% |
!! | AATCACTTTTACAAGTTCAG+CGG | + | chr8.2:22995641-22995660 | MS.gene61254:intron | 30.0% |
!! | AATGTACACTTTTAGAAACG+GGG | + | chr8.2:22996388-22996407 | MS.gene61254:CDS | 30.0% |
!! | AGATTGAAACTTTGAGGTAA+AGG | - | chr8.2:22994432-22994451 | None:intergenic | 30.0% |
!! | GAATGTACACTTTTAGAAAC+GGG | + | chr8.2:22996387-22996406 | MS.gene61254:CDS | 30.0% |
!! | GATTGAAACTTTGAGGTAAA+GGG | - | chr8.2:22994431-22994450 | None:intergenic | 30.0% |
!! | GGAATGTACACTTTTAGAAA+CGG | + | chr8.2:22996386-22996405 | MS.gene61254:CDS | 30.0% |
!! | GTAAAGGGTATTGTAAAAGA+AGG | - | chr8.2:22994416-22994435 | None:intergenic | 30.0% |
!! | TGTTGATTCTTTGTTAAGTG+TGG | + | chr8.2:22995138-22995157 | MS.gene61254:intron | 30.0% |
!!! | ATATGACTGTCTTGCTTTTT+AGG | - | chr8.2:22996455-22996474 | None:intergenic | 30.0% |
!!! | GGAATTTATAGGTTTTTTGG+TGG | + | chr8.2:22994911-22994930 | MS.gene61254:CDS | 30.0% |
!!! | TATGACTGTCTTGCTTTTTA+GGG | - | chr8.2:22996454-22996473 | None:intergenic | 30.0% |
AAATCAGGGAATGTCTATTC+AGG | - | chr8.2:22996743-22996762 | None:intergenic | 35.0% | |
AACGTGTTGTATGGTCAATT+GGG | + | chr8.2:22994642-22994661 | MS.gene61254:CDS | 35.0% | |
AACTTGACCATATTCTTGCA+CGG | - | chr8.2:22996071-22996090 | None:intergenic | 35.0% | |
AATGTCAAAGAAGGATGAAC+TGG | + | chr8.2:22997174-22997193 | MS.gene61254:CDS | 35.0% | |
ACTTGTAAAAGTGATTGGCA+AGG | - | chr8.2:22995637-22995656 | None:intergenic | 35.0% | |
AGAGCTTAAATTCTGGATCT+TGG | + | chr8.2:22994684-22994703 | MS.gene61254:CDS | 35.0% | |
ATAGTGGTCATTGTGATTCT+AGG | + | chr8.2:22995523-22995542 | MS.gene61254:intron | 35.0% | |
ATCGTGGTTAATGAGAAACT+AGG | - | chr8.2:22995825-22995844 | None:intergenic | 35.0% | |
ATGAAGGTGAGTTTCATAAG+GGG | + | chr8.2:22994735-22994754 | MS.gene61254:CDS | 35.0% | |
CAGGTTGTTGAAAATTTGAG+TGG | - | chr8.2:22995586-22995605 | None:intergenic | 35.0% | |
CATATCCGCAAAATATTCTC+CGG | - | chr8.2:22996285-22996304 | None:intergenic | 35.0% | |
CATATGAGTGGAAGATTTGA+AGG | + | chr8.2:22994788-22994807 | MS.gene61254:CDS | 35.0% | |
CTAGTACAACAGAATGTTGT+TGG | - | chr8.2:22995717-22995736 | None:intergenic | 35.0% | |
CTTTCAAAAGCCAAAAGGAT+TGG | + | chr8.2:22995799-22995818 | MS.gene61254:intron | 35.0% | |
GAAAATGATGAGGAGTAACT+TGG | - | chr8.2:22994313-22994332 | None:intergenic | 35.0% | |
GAGAAAGTAAAGAGAGGTTA+AGG | - | chr8.2:22994495-22994514 | None:intergenic | 35.0% | |
GAGCTTAAATTCTGGATCTT+GGG | + | chr8.2:22994685-22994704 | MS.gene61254:CDS | 35.0% | |
GAGTTCATACTTGCAATGAT+GGG | + | chr8.2:22994981-22995000 | MS.gene61254:CDS | 35.0% | |
GCAAGGTAAATGAATCAAAC+AGG | - | chr8.2:22995620-22995639 | None:intergenic | 35.0% | |
GCTGAACTTGTAAAAGTGAT+TGG | - | chr8.2:22995642-22995661 | None:intergenic | 35.0% | |
GCTGCAAACACTTAATTAAG+TGG | + | chr8.2:22997053-22997072 | MS.gene61254:intron | 35.0% | |
GGAGTCTATCAATTTCAGAA+TGG | + | chr8.2:22996317-22996336 | MS.gene61254:CDS | 35.0% | |
GGCATGGAATTGGAATTTAT+AGG | + | chr8.2:22994900-22994919 | MS.gene61254:CDS | 35.0% | |
GTATACCAAATACTGAATCG+TGG | - | chr8.2:22995841-22995860 | None:intergenic | 35.0% | |
GTCAATTAAAATAAGCCCTC+AGG | - | chr8.2:22996813-22996832 | None:intergenic | 35.0% | |
GTGATGTTTATACTGGTGAA+TGG | + | chr8.2:22994933-22994952 | MS.gene61254:CDS | 35.0% | |
GTTCCTTAGCATTATCAGAA+TGG | + | chr8.2:22995110-22995129 | MS.gene61254:intron | 35.0% | |
TATACTGGTGAATGGTGTAA+TGG | + | chr8.2:22994941-22994960 | MS.gene61254:CDS | 35.0% | |
TATGTTGGGGAATTCAAATG+GGG | + | chr8.2:22995010-22995029 | MS.gene61254:CDS | 35.0% | |
TCAACGATCTTGAGAAGAAT+AGG | - | chr8.2:22994589-22994608 | None:intergenic | 35.0% | |
TGTTCATGGTGAAAATGATG+AGG | - | chr8.2:22994323-22994342 | None:intergenic | 35.0% | |
TGTTGTTGGCATTGTTTGTT+CGG | - | chr8.2:22995703-22995722 | None:intergenic | 35.0% | |
TTCTTTGTTAAGTGTGGACT+TGG | + | chr8.2:22995144-22995163 | MS.gene61254:intron | 35.0% | |
TTTGAAGGTGATTGGATTGA+TGG | + | chr8.2:22994803-22994822 | MS.gene61254:CDS | 35.0% | |
! | AATGATGGGAGTCATTATGT+TGG | + | chr8.2:22994995-22995014 | MS.gene61254:CDS | 35.0% |
! | AGCAATGGTGATGTTTATGA+AGG | + | chr8.2:22994719-22994738 | MS.gene61254:CDS | 35.0% |
! | ATATGCCGGAGAATATTTTG+CGG | + | chr8.2:22996277-22996296 | MS.gene61254:CDS | 35.0% |
! | ATGATGGGAGTCATTATGTT+GGG | + | chr8.2:22994996-22995015 | MS.gene61254:CDS | 35.0% |
! | CGGCGATATTTATTTAGCTT+TGG | + | chr8.2:22995661-22995680 | MS.gene61254:intron | 35.0% |
! | CTCAAATTTTCAACAACCTG+TGG | + | chr8.2:22995586-22995605 | MS.gene61254:intron | 35.0% |
! | CTGACTTCAATCTGAAGTAT+TGG | + | chr8.2:22995454-22995473 | MS.gene61254:intron | 35.0% |
! | GGATTGATGGAAAGTATGAT+GGG | + | chr8.2:22994816-22994835 | MS.gene61254:CDS | 35.0% |
! | GGTATACTTTTCTGCTTTCA+TGG | + | chr8.2:22995854-22995873 | MS.gene61254:intron | 35.0% |
! | TATTTTGCGGATATGATGCA+TGG | + | chr8.2:22996290-22996309 | MS.gene61254:CDS | 35.0% |
! | TGGATTGATGGAAAGTATGA+TGG | + | chr8.2:22994815-22994834 | MS.gene61254:CDS | 35.0% |
! | TTCAAATGGGGTGTTAAACA+TGG | + | chr8.2:22995022-22995041 | MS.gene61254:CDS | 35.0% |
!! | GTGTTAAACATGGATTAGGA+CGG | + | chr8.2:22995032-22995051 | MS.gene61254:CDS | 35.0% |
!! | TTTGGTGGTGATGTTTATAC+TGG | + | chr8.2:22994926-22994945 | MS.gene61254:CDS | 35.0% |
!!! | GTTTTGGTTAAGTGTACTTC+TGG | + | chr8.2:22995241-22995260 | MS.gene61254:intron | 35.0% |
ACTGTATCCGTGCAAGAATA+TGG | + | chr8.2:22996061-22996080 | MS.gene61254:intron | 40.0% | |
AGAAATGGGGACATATATGC+CGG | + | chr8.2:22996263-22996282 | MS.gene61254:intron | 40.0% | |
AGCTGTCGAAGCTAATTTCA+AGG | - | chr8.2:22996212-22996231 | None:intergenic | 40.0% | |
AGTCAGATTGAATGCATGTC+TGG | - | chr8.2:22995440-22995459 | None:intergenic | 40.0% | |
ATCCTTCTTTGACATTCCGT+AGG | - | chr8.2:22997170-22997189 | None:intergenic | 40.0% | |
ATGGCAACACCAAAGATACA+AGG | - | chr8.2:22996677-22996696 | None:intergenic | 40.0% | |
ATGTCCATCACGAATCATGA+TGG | - | chr8.2:22996696-22996715 | None:intergenic | 40.0% | |
CAACGTGTTGTATGGTCAAT+TGG | + | chr8.2:22994641-22994660 | MS.gene61254:CDS | 40.0% | |
CTCATCATCAACGTGTTGTA+TGG | + | chr8.2:22994633-22994652 | MS.gene61254:CDS | 40.0% | |
GGAGTTCATACTTGCAATGA+TGG | + | chr8.2:22994980-22994999 | MS.gene61254:CDS | 40.0% | |
GTGGAAGATTTGAAGGTGAT+TGG | + | chr8.2:22994795-22994814 | MS.gene61254:CDS | 40.0% | |
GTTAAGTGTGGACTTGGATT+AGG | + | chr8.2:22995150-22995169 | MS.gene61254:intron | 40.0% | |
TACTTTCTTCTTGGGCTTTC+TGG | + | chr8.2:22996773-22996792 | MS.gene61254:intron | 40.0% | |
TATCGTGGACAGTATAGGAA+GGG | + | chr8.2:22994872-22994891 | MS.gene61254:CDS | 40.0% | |
TGAGGCTTTCCTTGTATCTT+TGG | + | chr8.2:22996665-22996684 | MS.gene61254:intron | 40.0% | |
TGATGGGAGTCATTATGTTG+GGG | + | chr8.2:22994997-22995016 | MS.gene61254:CDS | 40.0% | |
TGTATGGTCAATTGGGTCAA+AGG | + | chr8.2:22994649-22994668 | MS.gene61254:CDS | 40.0% | |
TGTCGAAGCTAATTTCAAGG+AGG | - | chr8.2:22996209-22996228 | None:intergenic | 40.0% | |
TTGTGTGTAGGTGTATGAGA+TGG | - | chr8.2:22994374-22994393 | None:intergenic | 40.0% | |
! | AGAAACTAGGCCAATCCTTT+TGG | - | chr8.2:22995812-22995831 | None:intergenic | 40.0% |
! | ATAAGCCCTCAGGTTGTTTA+AGG | - | chr8.2:22996803-22996822 | None:intergenic | 40.0% |
! | TGGGGTGTTAAACATGGATT+AGG | + | chr8.2:22995028-22995047 | MS.gene61254:CDS | 40.0% |
! | TGGGTTCAAGTTTACAGCAA+TGG | + | chr8.2:22994704-22994723 | MS.gene61254:CDS | 40.0% |
!! | GATGGAAAGTATGATGGGTT+TGG | + | chr8.2:22994821-22994840 | MS.gene61254:CDS | 40.0% |
!!! | TGATGGGTTTTGTTGTGTGT+AGG | - | chr8.2:22994386-22994405 | None:intergenic | 40.0% |
AATGGTCAGTGTCATGGCTT+TGG | + | chr8.2:22994959-22994978 | MS.gene61254:CDS | 45.0% | |
AGCCTACGGAATGTCAAAGA+AGG | + | chr8.2:22997165-22997184 | MS.gene61254:CDS | 45.0% | |
CAGAATGGTCACCGATATGA+GGG | + | chr8.2:22996332-22996351 | MS.gene61254:CDS | 45.0% | |
GAAGGAAGAAGACAAGGACT+GGG | + | chr8.2:22996365-22996384 | MS.gene61254:CDS | 45.0% | |
GACAGTATAGGAAGGGTTTG+AGG | + | chr8.2:22994879-22994898 | MS.gene61254:CDS | 45.0% | |
GATTAGGACGGTACCATTTC+AGG | + | chr8.2:22995044-22995063 | MS.gene61254:CDS | 45.0% | |
GGTGTATGAGATGGTGAAGA+TGG | - | chr8.2:22994365-22994384 | None:intergenic | 45.0% | |
GTATCGTGGACAGTATAGGA+AGG | + | chr8.2:22994871-22994890 | MS.gene61254:CDS | 45.0% | |
GTCAATTGGGTCAAAGGATG+AGG | + | chr8.2:22994655-22994674 | MS.gene61254:CDS | 45.0% | |
GTGGACCTTAAACAACCTGA+GGG | + | chr8.2:22996795-22996814 | MS.gene61254:intron | 45.0% | |
GTTGCCATCATGATTCGTGA+TGG | + | chr8.2:22996689-22996708 | MS.gene61254:intron | 45.0% | |
TCAGAATGGTCACCGATATG+AGG | + | chr8.2:22996331-22996350 | MS.gene61254:CDS | 45.0% | |
TGAACAGGATGCTCATTGTG+CGG | + | chr8.2:22997135-22997154 | MS.gene61254:intron | 45.0% | |
TGAAGGAAGAAGACAAGGAC+TGG | + | chr8.2:22996364-22996383 | MS.gene61254:CDS | 45.0% | |
TGGCATGAAGGAAGAAGACA+AGG | + | chr8.2:22996359-22996378 | MS.gene61254:CDS | 45.0% | |
TGGTGTAATGGTCAGTGTCA+TGG | + | chr8.2:22994953-22994972 | MS.gene61254:CDS | 45.0% | |
TGTCAATGTCAAGTCGGTGT+CGG | + | chr8.2:22995411-22995430 | MS.gene61254:intron | 45.0% | |
TTTCTTCTTGGGCTTTCTGG+TGG | + | chr8.2:22996776-22996795 | MS.gene61254:intron | 45.0% | |
! | AAGGGTTTGAGGCATGGAAT+TGG | + | chr8.2:22994890-22994909 | MS.gene61254:CDS | 45.0% |
! | CAAGGTTTTCAAAGCTGTCC+AGG | + | chr8.2:22996502-22996521 | MS.gene61254:CDS | 45.0% |
! | GTAGGTATCGTGGACAGTAT+AGG | + | chr8.2:22994867-22994886 | MS.gene61254:CDS | 45.0% |
! | TATAGGAAGGGTTTGAGGCA+TGG | + | chr8.2:22994884-22994903 | MS.gene61254:CDS | 45.0% |
! | TTCTGGTTGTTTGATGCAGC+AGG | + | chr8.2:22995258-22995277 | MS.gene61254:intron | 45.0% |
!! | ATGGGTTTGGTGTTGAAACG+TGG | + | chr8.2:22994834-22994853 | MS.gene61254:CDS | 45.0% |
!! | CAGCTTTGAAAACCTTGGCA+TGG | - | chr8.2:22996499-22996518 | None:intergenic | 45.0% |
!! | CTGGACAGCTTTGAAAACCT+TGG | - | chr8.2:22996504-22996523 | None:intergenic | 45.0% |
!! | GCAGCAGGACTTTGATTTTC+TGG | + | chr8.2:22995273-22995292 | MS.gene61254:intron | 45.0% |
!! | TGCTTGAGAAGCGTTGTTCA+TGG | - | chr8.2:22994337-22994356 | None:intergenic | 45.0% |
!! | TGGGTTTGGTGTTGAAACGT+GGG | + | chr8.2:22994835-22994854 | MS.gene61254:CDS | 45.0% |
!! | TTCATAAGGGGAAGTGCTCA+GGG | + | chr8.2:22994747-22994766 | MS.gene61254:CDS | 45.0% |
!! | TTTCATAAGGGGAAGTGCTC+AGG | + | chr8.2:22994746-22994765 | MS.gene61254:CDS | 45.0% |
AGAAACGGGGAAACACAGTG+TGG | + | chr8.2:22996401-22996420 | MS.gene61254:CDS | 50.0% | |
AGCTAGAGTTGCAGCTGTGA+AGG | + | chr8.2:22997237-22997256 | MS.gene61254:CDS | 50.0% | |
AGTGTGGTCACTGGCAGAAT+GGG | + | chr8.2:22996417-22996436 | MS.gene61254:CDS | 50.0% | |
ATGTGCTGTAGACCATGCCA+AGG | + | chr8.2:22996484-22996503 | MS.gene61254:CDS | 50.0% | |
CAAACAGGTGCTTCAACCAC+AGG | - | chr8.2:22995605-22995624 | None:intergenic | 50.0% | |
GCGGATATGATGCATGGCTT+TGG | + | chr8.2:22996296-22996315 | MS.gene61254:CDS | 50.0% | |
GGTGGACCTTAAACAACCTG+AGG | + | chr8.2:22996794-22996813 | MS.gene61254:intron | 50.0% | |
TTGGCATGGTCTACAGCACA+TGG | - | chr8.2:22996485-22996504 | None:intergenic | 50.0% | |
! | GCTAGAGGAAGTAGGTATCG+TGG | + | chr8.2:22994857-22994876 | MS.gene61254:CDS | 50.0% |
!! | AAACGTGGGCTAGAGGAAGT+AGG | + | chr8.2:22994849-22994868 | MS.gene61254:CDS | 50.0% |
ACAGGATGCTCATTGTGCGG+CGG | + | chr8.2:22997138-22997157 | MS.gene61254:intron | 55.0% | |
CAGTGTGGTCACTGGCAGAA+TGG | + | chr8.2:22996416-22996435 | MS.gene61254:CDS | 55.0% | |
CATGCCACGCACCCTCATAT+CGG | - | chr8.2:22996346-22996365 | None:intergenic | 55.0% | |
GGGAAACACAGTGTGGTCAC+TGG | + | chr8.2:22996408-22996427 | MS.gene61254:CDS | 55.0% | |
! | TATGAGGGTGCGTGGCATGA+AGG | + | chr8.2:22996347-22996366 | MS.gene61254:CDS | 55.0% |
!! | GGTGTTGAAACGTGGGCTAG+AGG | + | chr8.2:22994842-22994861 | MS.gene61254:CDS | 55.0% |
TGTGCGGCGGAGAAAGCCTA+CGG | + | chr8.2:22997151-22997170 | MS.gene61254:CDS | 60.0% | |
! | GTCACCGATATGAGGGTGCG+TGG | + | chr8.2:22996339-22996358 | MS.gene61254:CDS | 60.0% |
!! | AAGGGGAAGTGCTCAGGGAG+TGG | + | chr8.2:22994752-22994771 | MS.gene61254:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 22994230 | 22997300 | 22994230 | ID=MS.gene61254 |
chr8.2 | mRNA | 22994230 | 22997300 | 22994230 | ID=MS.gene61254.t1;Parent=MS.gene61254 |
chr8.2 | exon | 22994230 | 22995065 | 22994230 | ID=MS.gene61254.t1.exon1;Parent=MS.gene61254.t1 |
chr8.2 | CDS | 22994230 | 22995065 | 22994230 | ID=cds.MS.gene61254.t1;Parent=MS.gene61254.t1 |
chr8.2 | exon | 22996265 | 22996523 | 22996265 | ID=MS.gene61254.t1.exon2;Parent=MS.gene61254.t1 |
chr8.2 | CDS | 22996265 | 22996523 | 22996265 | ID=cds.MS.gene61254.t1;Parent=MS.gene61254.t1 |
chr8.2 | exon | 22997142 | 22997300 | 22997142 | ID=MS.gene61254.t1.exon3;Parent=MS.gene61254.t1 |
chr8.2 | CDS | 22997142 | 22997300 | 22997142 | ID=cds.MS.gene61254.t1;Parent=MS.gene61254.t1 |
Gene Sequence |
Protein sequence |