AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61497


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61497.t1 MTR_4g114320 95.238 399 18 1 1 399 1 398 0.0 777
MS.gene61497.t1 MTR_3g107510 66.142 381 109 6 26 400 32 398 8.42e-173 488
MS.gene61497.t1 MTR_1g012030 76.950 282 63 2 116 396 131 411 3.86e-154 442
MS.gene61497.t1 MTR_4g005330 38.567 293 162 3 121 396 63 354 6.38e-67 216
MS.gene61497.t1 MTR_4g005330 38.754 289 159 3 125 396 1 288 1.41e-66 214
MS.gene61497.t1 MTR_8g096050 37.634 279 168 4 122 395 225 502 2.15e-51 180
MS.gene61497.t1 MTR_3g098460 35.842 279 173 4 122 395 203 480 3.02e-48 171
MS.gene61497.t1 MTR_7g068340 33.942 274 163 7 135 400 98 361 1.44e-46 164
MS.gene61497.t1 MTR_7g068340 27.586 174 121 2 123 296 186 354 6.01e-16 79.3
MS.gene61497.t1 MTR_7g084400 35.461 282 171 5 120 395 209 485 9.14e-46 164
MS.gene61497.t1 MTR_5g009500 32.013 303 177 6 122 395 36 338 1.89e-45 160
MS.gene61497.t1 MTR_5g009500 27.778 216 140 5 200 399 13 228 8.71e-15 75.5
MS.gene61497.t1 MTR_5g009500 25.758 198 124 6 121 295 138 335 1.41e-12 68.9
MS.gene61497.t1 MTR_8g027975 32.353 306 174 8 122 395 49 353 1.10e-44 158
MS.gene61497.t1 MTR_8g027975 29.082 196 127 4 215 399 47 241 1.96e-16 80.5
MS.gene61497.t1 MTR_7g064980 32.566 304 183 7 111 395 14 314 8.98e-44 155
MS.gene61497.t1 MTR_7g064980 24.490 196 136 4 109 295 119 311 4.03e-13 70.1
MS.gene61497.t1 MTR_8g090210 34.354 294 169 5 122 395 108 397 1.71e-40 148
MS.gene61497.t1 MTR_8g090210 31.492 181 102 5 140 299 219 398 1.97e-14 74.7
MS.gene61497.t1 MTR_3g104600 30.887 327 187 9 100 395 11 329 2.45e-39 144
MS.gene61497.t1 MTR_3g104600 26.866 201 128 2 220 401 36 236 9.32e-16 78.2
MS.gene61497.t1 MTR_3g074490 34.564 298 171 5 118 395 110 403 2.67e-39 145
MS.gene61497.t1 MTR_3g074490 27.222 180 128 2 221 400 118 294 1.19e-12 69.3
MS.gene61497.t1 MTR_2g436930 32.039 309 170 8 126 395 17 324 1.06e-38 142
MS.gene61497.t1 MTR_2g436930 29.082 196 119 4 218 394 14 208 7.56e-17 81.3
MS.gene61497.t1 MTR_2g436930 26.425 193 114 5 125 292 129 318 8.32e-13 69.3
MS.gene61497.t1 MTR_4g016730 32.509 283 152 8 135 400 100 360 3.75e-38 141
MS.gene61497.t1 MTR_4g119770 29.907 321 163 8 126 395 16 325 2.44e-37 138
MS.gene61497.t1 MTR_4g119770 26.829 205 128 3 218 401 13 216 7.49e-17 81.3
MS.gene61497.t1 MTR_4g119770 28.205 195 112 5 125 294 130 321 1.10e-14 75.1
MS.gene61497.t1 MTR_6g091800 27.632 304 176 7 122 395 17 306 1.56e-34 130
MS.gene61497.t1 MTR_6g091800 28.856 201 128 4 213 398 12 212 1.25e-17 83.6
MS.gene61497.t1 MTR_5g081150 31.757 296 182 7 120 397 30 323 3.60e-33 127
MS.gene61497.t1 MTR_6g091800 25.610 328 176 7 122 395 17 330 6.64e-31 121
MS.gene61497.t1 MTR_6g091800 25.778 225 128 4 213 398 12 236 3.16e-14 73.6
MS.gene61497.t1 MTR_7g109135 30.903 288 182 8 126 398 24 309 1.98e-30 119
MS.gene61497.t1 MTR_2g436930 35.176 199 107 4 218 395 37 234 7.17e-29 113
MS.gene61497.t1 MTR_2g436930 26.425 193 114 5 125 292 39 228 2.24e-13 69.7
MS.gene61497.t1 MTR_6g034145 26.772 254 158 5 163 395 6 252 6.88e-28 111
MS.gene61497.t1 MTR_6g034145 30.263 152 94 2 259 398 7 158 5.07e-16 77.8
MS.gene61497.t1 MTR_6g034145 25.854 205 126 5 124 307 61 260 3.12e-13 69.7
MS.gene61497.t1 MTR_7g084400 35.185 216 132 5 120 328 203 417 7.82e-28 114
MS.gene61497.t1 MTR_7g084400 28.652 178 123 2 220 394 208 384 2.59e-12 68.6
MS.gene61497.t1 MTR_8g076760 29.433 282 167 10 140 395 30 305 6.12e-27 109
MS.gene61497.t1 MTR_8g076760 27.000 200 120 9 124 301 113 308 3.02e-11 64.3
MS.gene61497.t1 MTR_8g076760 27.473 182 122 4 224 397 19 198 4.44e-11 63.9
MS.gene61497.t1 MTR_6g092210 26.210 248 161 5 163 395 6 246 7.16e-27 108
MS.gene61497.t1 MTR_6g092210 30.822 146 95 2 259 398 7 152 1.90e-16 79.0
MS.gene61497.t1 MTR_7g109135 29.825 285 182 8 126 398 24 302 1.23e-26 108
MS.gene61497.t1 MTR_6g091800 28.302 265 143 8 122 353 17 267 1.49e-26 107
MS.gene61497.t1 MTR_6g091800 28.856 201 128 4 213 398 12 212 8.65e-18 83.2
MS.gene61497.t1 MTR_6g091800 27.869 244 135 6 122 338 17 246 3.61e-26 106
MS.gene61497.t1 MTR_6g091800 28.856 201 128 4 213 398 12 212 8.49e-18 83.2
MS.gene61497.t1 MTR_6g091800 24.516 310 166 7 122 377 17 312 2.17e-25 105
MS.gene61497.t1 MTR_6g091800 25.778 225 128 4 213 398 12 236 2.55e-14 73.6
MS.gene61497.t1 MTR_1g097890 27.636 275 181 5 125 399 52 308 1.69e-24 102
MS.gene61497.t1 MTR_1g087840 30.153 262 163 7 143 396 55 304 1.71e-24 102
MS.gene61497.t1 MTR_8g098240 29.455 275 182 4 125 395 321 587 1.83e-24 105
MS.gene61497.t1 MTR_8g098240 25.134 187 124 4 120 298 409 587 5.51e-12 67.8
MS.gene61497.t1 MTR_8g098240 26.066 211 135 5 200 395 287 491 6.44e-11 64.3
MS.gene61497.t1 MTR_4g119770 28.740 254 129 7 126 338 16 258 7.35e-24 100
MS.gene61497.t1 MTR_4g119770 26.829 205 128 3 218 401 13 216 2.90e-17 81.3
MS.gene61497.t1 MTR_5g055410 32.414 290 165 9 136 401 33 315 1.82e-23 100
MS.gene61497.t1 MTR_5g073040 27.178 287 195 7 124 401 39 320 6.46e-23 99.0
MS.gene61497.t1 MTR_7g109135 30.472 233 152 6 174 398 1 231 1.11e-22 96.3
MS.gene61497.t1 MTR_6g034515 27.881 269 178 7 140 399 83 344 1.16e-20 92.8
MS.gene61497.t1 MTR_6g034515 29.442 197 122 4 125 307 161 354 8.41e-14 72.8
MS.gene61497.t1 MTR_7g109135 31.754 211 134 6 196 398 2 210 1.93e-20 89.4
MS.gene61497.t1 MTR_8g092080 26.909 275 181 6 124 397 52 307 2.52e-20 91.3
MS.gene61497.t1 MTR_5g030530 25.763 295 194 6 122 395 6 296 3.94e-20 90.5
MS.gene61497.t1 MTR_8g066975 25.085 295 196 6 122 395 6 296 5.12e-20 90.1
MS.gene61497.t1 MTR_3g104500 25.926 297 198 8 118 395 28 321 1.57e-19 89.0
MS.gene61497.t1 MTR_3g104500 29.000 200 119 5 220 400 35 230 5.86e-14 72.8
MS.gene61497.t1 MTR_4g078545 25.899 278 186 6 124 383 75 350 5.13e-19 88.2
MS.gene61497.t1 MTR_2g098070 25.670 261 164 7 150 396 109 353 6.44e-19 87.8
MS.gene61497.t1 MTR_2g098070 28.481 158 98 4 250 396 106 259 6.89e-11 63.5
MS.gene61497.t1 MTR_8g019480 24.545 330 206 9 112 400 22 349 9.47e-19 87.0
MS.gene61497.t1 MTR_6g015860 25.753 299 186 11 130 400 21 311 1.67e-18 86.3
MS.gene61497.t1 MTR_8g107270 22.500 280 197 5 122 383 16 293 3.37e-18 85.1
MS.gene61497.t1 MTR_8g036880 24.752 303 165 6 121 383 99 378 6.13e-18 85.5
MS.gene61497.t1 MTR_3g028590 26.761 284 176 8 124 383 97 372 6.52e-18 85.1
MS.gene61497.t1 MTR_3g028590 26.761 284 176 8 124 383 93 368 6.76e-18 85.1
MS.gene61497.t1 MTR_6g091910 29.000 200 122 5 213 395 12 208 1.26e-17 81.6
MS.gene61497.t1 MTR_6g091910 27.805 205 124 5 122 307 17 216 1.46e-16 78.6
MS.gene61497.t1 MTR_4g012850 23.368 291 214 4 116 399 8 296 4.78e-17 81.6
MS.gene61497.t1 MTR_4g012850 26.768 198 133 4 119 307 104 298 3.53e-16 79.0
MS.gene61497.t1 MTR_3g025800 24.688 320 195 7 121 401 25 337 5.04e-17 82.0
MS.gene61497.t1 MTR_7g015870 25.263 285 181 9 140 399 41 318 6.99e-17 81.3
MS.gene61497.t1 MTR_1g095780 25.267 281 196 8 121 400 522 789 1.13e-16 82.4
MS.gene61497.t1 MTR_1g095780 27.041 196 134 4 119 310 605 795 2.42e-11 65.9
MS.gene61497.t1 MTR_2g032610 27.491 291 184 10 122 389 27 313 4.67e-16 79.0
MS.gene61497.t1 MTR_1g088995 28.571 182 119 4 223 397 34 211 4.03e-15 74.7
MS.gene61497.t1 MTR_2g102010 28.947 152 98 3 137 278 123 274 1.23e-14 74.3
MS.gene61497.t1 MTR_2g102010 22.807 285 210 4 122 398 15 297 2.42e-12 67.4
MS.gene61497.t1 MTR_1g088995 28.571 182 119 4 223 397 34 211 1.51e-14 74.3
MS.gene61497.t1 MTR_1g088995 24.275 276 198 5 126 394 35 306 2.23e-11 64.7
MS.gene61497.t1 MTR_6g091800 25.778 225 128 4 213 398 12 236 1.86e-14 73.9
MS.gene61497.t1 MTR_5g081150 28.507 221 141 6 120 325 30 248 2.03e-14 72.8
MS.gene61497.t1 MTR_5g081150 27.650 217 136 6 199 401 19 228 6.58e-11 62.8
MS.gene61497.t1 MTR_5g081150 28.326 233 145 7 120 337 30 255 2.27e-14 73.2
MS.gene61497.t1 MTR_5g081150 27.650 217 136 6 199 401 19 228 8.87e-11 62.4
MS.gene61497.t1 MTR_6g091800 25.778 225 128 4 213 398 12 236 2.55e-14 73.2
MS.gene61497.t1 MTR_7g015870 24.555 281 178 10 140 394 37 309 3.65e-14 73.6
MS.gene61497.t1 MTR_7g015870 24.194 186 127 4 125 296 123 308 7.69e-12 66.2
MS.gene61497.t1 MTR_6g091800 26.257 179 94 5 122 273 17 184 8.19e-13 67.0
MS.gene61497.t1 MTR_6g091800 27.684 177 113 4 213 374 12 188 1.74e-11 63.2
MS.gene61497.t1 MTR_4g088545 23.052 308 200 8 115 395 3 300 1.31e-12 68.6
MS.gene61497.t1 MTR_7g117030 26.269 335 174 13 121 395 14 335 2.39e-12 68.2
MS.gene61497.t1 MTR_3g100570 25.311 241 168 8 165 395 72 310 3.01e-12 67.4
MS.gene61497.t1 MTR_6g033280 22.581 279 179 8 48 316 7 258 3.05e-12 67.8
MS.gene61497.t1 MTR_1g090330 22.959 196 132 5 117 296 103 295 1.14e-11 65.5
MS.gene61497.t1 MTR_4g057850 21.993 291 189 8 119 385 17 293 2.46e-11 64.7
MS.gene61497.t1 MTR_3g090820 23.881 268 172 7 155 395 125 387 3.98e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61497.t1 AT4G32400 70.890 292 83 2 110 400 100 390 1.20e-151 434
MS.gene61497.t1 AT3G20240 41.438 292 153 4 122 396 50 340 3.61e-69 222
MS.gene61497.t1 AT5G51050 37.410 278 163 6 124 395 223 495 4.69e-46 165
MS.gene61497.t1 AT5G51050 29.444 180 120 5 123 297 317 494 4.04e-17 83.6
MS.gene61497.t1 AT5G61810 36.071 280 159 6 124 395 65 332 2.68e-45 159
MS.gene61497.t1 AT5G61810 28.249 177 123 3 123 296 155 330 2.52e-17 82.8
MS.gene61497.t1 AT3G51870 31.636 275 170 6 135 401 102 366 6.96e-45 159
MS.gene61497.t1 AT3G51870 27.273 176 119 4 123 296 190 358 6.26e-13 70.1
MS.gene61497.t1 AT4G01100 33.333 306 171 9 122 395 40 344 2.66e-44 157
MS.gene61497.t1 AT4G01100 30.412 194 123 4 215 397 38 230 3.74e-16 79.7
MS.gene61497.t1 AT4G01100 24.378 201 127 3 121 296 142 342 2.74e-13 70.9
MS.gene61497.t1 AT5G61810 36.071 280 159 6 124 395 208 475 5.85e-44 159
MS.gene61497.t1 AT5G61810 28.249 177 123 3 123 296 298 473 7.81e-17 82.4
MS.gene61497.t1 AT4G01100 31.975 319 172 8 122 395 40 358 1.51e-43 155
MS.gene61497.t1 AT4G01100 28.986 207 123 4 215 397 38 244 1.32e-15 78.2
MS.gene61497.t1 AT4G01100 24.378 201 127 3 121 296 156 356 2.51e-13 71.2
MS.gene61497.t1 AT2G37890 34.237 295 172 9 120 395 41 332 4.85e-43 154
MS.gene61497.t1 AT2G37890 28.111 217 136 6 199 401 29 239 1.49e-16 80.5
MS.gene61497.t1 AT5G07320 36.803 269 150 7 133 393 218 474 9.85e-43 156
MS.gene61497.t1 AT5G07320 28.916 166 115 2 229 394 219 381 7.79e-13 70.1
MS.gene61497.t1 AT5G01500 33.091 275 166 6 135 401 130 394 2.82e-42 153
MS.gene61497.t1 AT5G01500 28.409 176 121 2 121 296 216 386 8.62e-13 69.7
MS.gene61497.t1 AT3G53940 33.559 295 174 7 120 395 69 360 3.72e-42 152
MS.gene61497.t1 AT3G53940 30.500 200 115 6 220 401 74 267 2.63e-16 80.1
MS.gene61497.t1 AT4G01100 32.881 295 165 9 133 395 1 294 7.23e-41 147
MS.gene61497.t1 AT4G01100 29.480 173 110 4 236 397 9 180 1.92e-14 73.9
MS.gene61497.t1 AT4G01100 24.155 207 132 3 121 302 92 298 1.98e-13 70.9
MS.gene61497.t1 AT5G64970 35.354 297 162 7 122 395 133 422 5.37e-40 147
MS.gene61497.t1 AT5G64970 29.834 181 105 5 140 299 244 423 1.03e-12 69.7
MS.gene61497.t1 AT5G64970 34.602 289 165 6 127 395 14 298 8.18e-39 141
MS.gene61497.t1 AT5G64970 29.834 181 105 5 140 299 120 299 3.93e-13 70.1
MS.gene61497.t1 AT4G26180 29.431 299 172 7 122 392 19 306 3.24e-37 138
MS.gene61497.t1 AT4G26180 30.612 196 121 4 213 393 14 209 4.63e-17 82.0
MS.gene61497.t1 AT3G55640 32.226 301 182 7 120 401 34 331 3.95e-37 137
MS.gene61497.t1 AT3G55640 26.904 197 134 5 111 299 132 326 1.91e-13 71.2
MS.gene61497.t1 AT3G55640 32.226 301 182 7 120 401 34 331 3.95e-37 137
MS.gene61497.t1 AT3G55640 26.904 197 134 5 111 299 132 326 1.91e-13 71.2
MS.gene61497.t1 AT1G14560 30.584 291 164 8 135 395 38 320 2.77e-36 135
MS.gene61497.t1 AT1G14560 29.670 182 112 2 236 401 44 225 1.04e-18 87.0
MS.gene61497.t1 AT3G21390 29.938 324 165 7 126 398 21 333 5.48e-35 132
MS.gene61497.t1 AT3G21390 29.082 196 109 6 125 292 131 324 5.73e-12 67.0
MS.gene61497.t1 AT1G78180 31.544 298 179 6 122 399 126 418 9.93e-35 133
MS.gene61497.t1 AT3G21390 29.878 328 160 8 126 398 43 355 1.13e-34 132
MS.gene61497.t1 AT3G21390 29.082 196 109 6 125 292 153 346 6.75e-12 67.0
MS.gene61497.t1 AT5G64970 34.767 279 152 7 122 377 133 404 1.71e-34 132
MS.gene61497.t1 AT5G64970 29.651 172 118 2 221 392 137 305 7.97e-12 67.0
MS.gene61497.t1 AT5G48970 29.487 312 177 7 126 395 24 334 1.80e-34 130
MS.gene61497.t1 AT5G48970 28.934 197 118 5 221 397 24 218 7.11e-17 81.6
MS.gene61497.t1 AT5G48970 26.531 196 115 5 124 292 135 328 1.42e-13 71.6
MS.gene61497.t1 AT4G26180 28.873 284 163 7 122 377 19 291 8.98e-33 125
MS.gene61497.t1 AT4G26180 30.612 196 121 4 213 393 14 209 3.22e-17 82.0
MS.gene61497.t1 AT1G14560 30.037 273 153 8 135 377 38 302 1.16e-30 119
MS.gene61497.t1 AT1G14560 29.670 182 112 2 236 401 44 225 9.61e-19 86.7
MS.gene61497.t1 AT5G48970 30.075 266 155 7 156 395 3 263 1.69e-29 115
MS.gene61497.t1 AT5G48970 26.531 196 115 5 124 292 64 257 5.22e-14 72.0
MS.gene61497.t1 AT5G48970 29.054 148 99 3 254 397 2 147 5.42e-14 72.0
MS.gene61497.t1 AT5G66380 31.419 296 176 10 126 398 12 303 4.88e-29 115
MS.gene61497.t1 AT5G66380 30.366 191 124 4 218 400 9 198 6.00e-19 87.0
MS.gene61497.t1 AT2G30160 27.972 286 190 6 124 397 42 323 3.97e-27 110
MS.gene61497.t1 AT1G14560 32.836 201 106 5 220 395 26 222 3.35e-26 105
MS.gene61497.t1 AT1G14560 32.407 108 59 1 308 401 20 127 5.41e-11 62.8
MS.gene61497.t1 AT1G14560 22.705 207 129 4 116 295 17 219 7.72e-11 62.4
MS.gene61497.t1 AT1G07030 28.975 283 188 6 124 397 40 318 3.88e-26 107
MS.gene61497.t1 AT1G34065 27.698 278 183 5 124 401 75 334 3.20e-25 105
MS.gene61497.t1 AT1G34065 27.607 163 112 3 120 280 152 310 1.95e-13 71.2
MS.gene61497.t1 AT1G34065 27.698 278 183 5 124 401 82 341 3.85e-25 105
MS.gene61497.t1 AT1G34065 27.607 163 112 3 120 280 159 317 2.35e-13 71.2
MS.gene61497.t1 AT4G11440 29.231 325 206 7 87 395 287 603 1.22e-24 106
MS.gene61497.t1 AT4G11440 30.899 178 118 2 219 396 330 502 6.37e-15 77.0
MS.gene61497.t1 AT4G11440 29.231 325 206 7 87 395 287 603 1.22e-24 106
MS.gene61497.t1 AT4G11440 30.899 178 118 2 219 396 330 502 6.37e-15 77.0
MS.gene61497.t1 AT4G39460 28.058 278 182 5 124 401 58 317 2.32e-24 102
MS.gene61497.t1 AT4G39460 27.607 163 112 3 120 280 135 293 1.95e-11 65.1
MS.gene61497.t1 AT4G39460 28.058 278 182 5 124 401 58 317 2.32e-24 102
MS.gene61497.t1 AT4G39460 27.607 163 112 3 120 280 135 293 1.95e-11 65.1
MS.gene61497.t1 AT4G39460 28.058 278 182 5 124 401 58 317 2.32e-24 102
MS.gene61497.t1 AT4G39460 27.607 163 112 3 120 280 135 293 1.95e-11 65.1
MS.gene61497.t1 AT1G25380 32.028 281 163 10 136 395 33 306 6.34e-24 102
MS.gene61497.t1 AT1G25380 31.609 174 102 6 236 397 38 206 7.06e-11 63.9
MS.gene61497.t1 AT1G25380 32.028 281 163 10 136 395 33 306 6.34e-24 102
MS.gene61497.t1 AT1G25380 31.609 174 102 6 236 397 38 206 7.06e-11 63.9
MS.gene61497.t1 AT5G46800 27.000 300 191 7 120 395 4 299 6.78e-24 100
MS.gene61497.t1 AT5G46800 27.000 300 191 7 120 395 4 299 6.78e-24 100
MS.gene61497.t1 AT5G46800 27.000 300 191 7 120 395 4 299 6.78e-24 100
MS.gene61497.t1 AT2G47490 30.282 284 168 9 136 398 29 303 1.06e-22 97.8
MS.gene61497.t1 AT3G53940 31.081 222 134 6 120 325 69 287 3.85e-22 95.9
MS.gene61497.t1 AT3G53940 30.500 200 115 6 220 401 74 267 1.86e-16 79.7
MS.gene61497.t1 AT5G26200 24.845 322 204 11 111 400 27 342 8.88e-20 90.1
MS.gene61497.t1 AT5G56450 26.510 298 191 9 122 395 32 325 9.88e-20 89.7
MS.gene61497.t1 AT5G56450 29.221 154 104 2 250 398 79 232 4.34e-14 73.2
MS.gene61497.t1 AT2G35800 26.690 281 193 8 121 400 542 810 1.52e-19 91.3
MS.gene61497.t1 AT1G79900 28.205 195 135 3 119 312 104 294 9.61e-19 86.3
MS.gene61497.t1 AT1G79900 24.615 260 184 7 140 395 32 283 2.22e-13 70.9
MS.gene61497.t1 AT2G33820 25.000 300 190 10 122 395 16 306 1.27e-18 86.3
MS.gene61497.t1 AT5G17400 26.000 250 164 5 144 383 51 289 1.39e-18 86.3
MS.gene61497.t1 AT3G55640 29.730 222 137 6 120 325 34 252 2.54e-18 84.3
MS.gene61497.t1 AT3G55640 29.268 205 127 6 204 392 21 223 2.29e-16 79.0
MS.gene61497.t1 AT3G55640 29.730 222 137 6 120 325 34 252 2.54e-18 84.3
MS.gene61497.t1 AT3G55640 29.268 205 127 6 204 392 21 223 2.29e-16 79.0
MS.gene61497.t1 AT5G13490 24.870 386 234 12 26 383 7 364 5.65e-18 85.5
MS.gene61497.t1 AT5G13490 24.870 386 234 12 26 383 7 364 5.65e-18 85.5
MS.gene61497.t1 AT4G28390 25.170 294 186 7 115 383 74 358 9.82e-18 84.7
MS.gene61497.t1 AT4G28390 29.870 154 93 5 250 392 123 272 3.98e-11 64.7
MS.gene61497.t1 AT4G28390 25.170 294 186 7 115 383 74 358 9.82e-18 84.7
MS.gene61497.t1 AT4G28390 29.870 154 93 5 250 392 123 272 3.98e-11 64.7
MS.gene61497.t1 AT2G26360 25.839 298 203 10 103 396 94 377 2.02e-17 83.6
MS.gene61497.t1 AT2G26360 28.571 182 123 4 125 304 206 382 4.12e-12 67.8
MS.gene61497.t1 AT3G08580 24.573 293 172 7 124 383 84 360 8.11e-17 82.0
MS.gene61497.t1 AT3G08580 24.573 293 172 7 124 383 84 360 8.11e-17 82.0
MS.gene61497.t1 AT1G72820 26.642 274 164 7 164 400 70 343 1.63e-16 80.5
MS.gene61497.t1 AT1G72820 26.642 274 164 7 164 400 70 343 1.63e-16 80.5
MS.gene61497.t1 AT5G42130 26.022 269 184 7 140 399 134 396 3.56e-16 80.1
MS.gene61497.t1 AT2G33820 24.351 308 190 11 122 395 16 314 4.74e-16 79.0
MS.gene61497.t1 AT5G15640 25.899 278 180 7 140 394 44 318 8.60e-16 78.2
MS.gene61497.t1 AT5G15640 25.899 278 180 7 140 394 37 311 1.16e-15 77.8
MS.gene61497.t1 AT4G03115 28.177 181 116 5 224 397 40 213 2.93e-15 75.1
MS.gene61497.t1 AT1G74240 25.658 304 185 7 121 389 33 330 3.15e-15 77.0
MS.gene61497.t1 AT4G03115 28.177 181 116 5 224 397 40 213 4.22e-15 74.7
MS.gene61497.t1 AT4G27940 28.090 267 161 10 155 395 146 407 1.20e-14 75.5
MS.gene61497.t1 AT5G58970 24.026 308 205 9 111 398 3 301 3.77e-14 73.2
MS.gene61497.t1 AT4G03115 28.177 181 116 5 224 397 40 213 3.81e-14 73.2
MS.gene61497.t1 AT4G03115 25.362 276 193 6 125 394 40 308 4.15e-12 67.0
MS.gene61497.t1 AT4G03115 28.177 181 116 5 224 397 72 245 6.89e-14 72.8
MS.gene61497.t1 AT4G03115 25.362 276 193 6 125 394 72 340 3.61e-12 67.4
MS.gene61497.t1 AT1G14140 27.317 205 131 6 106 295 96 297 7.23e-14 72.4
MS.gene61497.t1 AT1G14140 20.748 294 210 8 119 394 11 299 7.03e-12 66.2
MS.gene61497.t1 AT2G17270 23.571 280 191 7 125 394 23 289 1.60e-12 68.2
MS.gene61497.t1 AT5G09470 26.271 236 167 4 165 395 99 332 1.67e-12 68.6
MS.gene61497.t1 AT5G01340 23.986 296 178 11 119 385 12 289 2.32e-12 67.8
MS.gene61497.t1 AT5G01340 27.586 203 127 8 210 400 8 202 2.29e-11 64.7
MS.gene61497.t1 AT4G03115 28.105 153 103 3 246 398 6 151 4.37e-12 66.2
MS.gene61497.t1 AT4G03115 29.936 157 101 3 121 272 68 220 1.29e-11 64.7
MS.gene61497.t1 AT4G03115 29.936 157 101 3 121 272 60 212 1.07e-11 65.1
MS.gene61497.t1 AT4G03115 28.169 142 95 3 257 398 9 143 5.48e-11 62.8
MS.gene61497.t1 AT1G74240 25.000 288 175 7 137 389 1 282 1.16e-11 65.9
MS.gene61497.t1 AT5G14040 24.286 280 185 8 127 392 85 351 1.95e-11 65.5
MS.gene61497.t1 AT2G39970 22.951 305 188 9 140 398 24 327 2.38e-11 65.1
MS.gene61497.t1 AT3G48850 24.296 284 188 9 125 394 72 342 7.94e-11 63.5

Find 94 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAGTAACCCTTGAAAATT+TGG 0.133521 8.3:-13262115 None:intergenic
TCTGGAATAAAGCTTGATTA+TGG 0.195570 8.3:+13261917 MS.gene61497:CDS
GGGATTGTTCAGGGGAAATT+TGG 0.199928 8.3:+13262390 MS.gene61497:CDS
TTGACCAATGCTTGCAAATA+AGG 0.238535 8.3:-13261960 None:intergenic
TGAAGTGTTTCAATCTATTA+TGG 0.243092 8.3:+13262351 MS.gene61497:CDS
AGCATTGGTCAAGCTGGATT+TGG 0.297922 8.3:+13261971 MS.gene61497:CDS
ATGCAAGCTGGGGCACTAAA+TGG 0.319788 8.3:+13263301 MS.gene61497:CDS
CTTGAAAAGGAAGGGCTTGT+AGG 0.321902 8.3:+13263364 MS.gene61497:CDS
GTAATAAGAGTTGGAGGATT+TGG 0.322119 8.3:-13262007 None:intergenic
GTAGGCTTATATAGAGGTTT+GGG 0.331916 8.3:+13263382 MS.gene61497:CDS
GATATAGTAATATGCAATTC+TGG 0.338974 8.3:+13261899 MS.gene61497:CDS
TTCGGCTGTTCTCCAAGTTT+AGG 0.342901 8.3:-13262786 None:intergenic
CTGGAATAAAGCTTGATTAT+GGG 0.350126 8.3:+13261918 MS.gene61497:CDS
GGATCAATGGCTACTGAATC+TGG 0.350533 8.3:+13261869 None:intergenic
GCAATTGACGAGGCAGGAAT+TGG 0.358937 8.3:-13262813 None:intergenic
CACCATCAAATGTGTCCTTA+TGG 0.362353 8.3:-13262302 None:intergenic
TGTAGGCTTATATAGAGGTT+TGG 0.364123 8.3:+13263381 MS.gene61497:CDS
CAATCTATTATGGAAGTTGA+TGG 0.369963 8.3:+13262361 MS.gene61497:CDS
AGATAATTTGTTGCAGCATA+AGG 0.371375 8.3:-13263136 None:intergenic
ATGGATGGAAGGGATTGTTC+AGG 0.371579 8.3:+13262380 MS.gene61497:CDS
GAATGTGATGACTCTACTAA+TGG 0.373055 8.3:+13263216 MS.gene61497:CDS
TTCATTGAAGAGTTAAGTAT+TGG 0.382677 8.3:-13262058 None:intergenic
ATTCCTGCCTCGTCAATTGC+AGG 0.383449 8.3:+13262816 MS.gene61497:CDS
GTGAGAATTGTTAGAGAAGA+AGG 0.392967 8.3:+13263064 MS.gene61497:CDS
CAAAACTCGTCTAACTGTTC+AGG 0.394317 8.3:+13262890 MS.gene61497:CDS
TTAACGTGAAATTCAAGATT+GGG 0.394844 8.3:+13262203 MS.gene61497:CDS
GGAGTTTGAAAAGTAGGTTC+AGG 0.397927 8.3:-13262094 None:intergenic
TTTAACGTGAAATTCAAGAT+TGG 0.402407 8.3:+13262202 MS.gene61497:CDS
TTAAAATTAGTTCCTGCTGC+TGG 0.426884 8.3:+13263415 MS.gene61497:CDS
GACCATAAGGACACATTTGA+TGG 0.429663 8.3:+13262300 MS.gene61497:CDS
CTACTAATGGGATCAGCTGC+TGG 0.434472 8.3:+13263229 MS.gene61497:CDS
AAATTTGGAGTTTGAAAAGT+AGG 0.437917 8.3:-13262100 None:intergenic
GGACTGACACCGAGTTTAAT+CGG 0.441637 8.3:+13263106 MS.gene61497:CDS
TTGATAAGTGGGGCAATTGC+TGG 0.443628 8.3:+13262244 MS.gene61497:CDS
GCTCGTAAGCATATGCAAGC+TGG 0.444326 8.3:+13263289 MS.gene61497:CDS
GATAATTTGTTGCAGCATAA+GGG 0.447081 8.3:-13263135 None:intergenic
CTTATCAATCTTCTTAGTGA+TGG 0.448938 8.3:-13262229 None:intergenic
CTCGTAAGCATATGCAAGCT+GGG 0.452266 8.3:+13263290 MS.gene61497:CDS
ACTCATGAGTATACTTGAAA+AGG 0.453834 8.3:+13263351 MS.gene61497:CDS
TCAAGCTGGATTTGGATTTG+TGG 0.454184 8.3:+13261979 MS.gene61497:CDS
TCAATTGCAGGTGCTGTAGC+TGG 0.456383 8.3:+13262828 MS.gene61497:CDS
GATGAAAGGAAGAAATTTGA+AGG 0.460865 8.3:+13262177 MS.gene61497:CDS
CTCTAGATGGTATGTGCATA+GGG 0.465028 8.3:-13262862 None:intergenic
TAAAATTAGTTCCTGCTGCT+GGG 0.466785 8.3:+13263416 MS.gene61497:CDS
AAGCAATTGTCTCCTAAACT+TGG 0.468583 8.3:+13262774 MS.gene61497:CDS
TGGATGGAAGGGATTGTTCA+GGG 0.470480 8.3:+13262381 MS.gene61497:CDS
TTTGCAAGCATTGGTCAAGC+TGG 0.476151 8.3:+13261965 MS.gene61497:CDS
ATGCTTGCAAATAAGGTAGT+TGG 0.480510 8.3:-13261953 None:intergenic
AGTCCTCTGTACAACTCTGC+TGG 0.488709 8.3:-13263088 None:intergenic
GGGCTTGTAGGCTTATATAG+AGG 0.496693 8.3:+13263376 MS.gene61497:CDS
AAAGTTGTTGAGGAAAGCCT+TGG 0.502667 8.3:+13262151 MS.gene61497:CDS
ACTACCTTATTTGCAAGCAT+TGG 0.504048 8.3:+13261956 MS.gene61497:CDS
CACTAAGAAGATTGATAAGT+GGG 0.505340 8.3:+13262233 MS.gene61497:CDS
TTCTTCCTTTCATCATGCCA+AGG 0.508145 8.3:-13262168 None:intergenic
AAGAACAGTTGTGGCGCCGT+TGG 0.508873 8.3:+13262276 MS.gene61497:CDS
CATTTGATGGTGGGGAGTTG+TGG 0.510279 8.3:+13262313 MS.gene61497:CDS
CTTGTAGTAATAAGAGTTGG+AGG 0.512749 8.3:-13262013 None:intergenic
CTCACCTCAATAGCCTTGCT+TGG 0.514450 8.3:-13262433 None:intergenic
ATGGAAGTTGATGGATGGAA+GGG 0.515546 8.3:+13262370 MS.gene61497:CDS
TGGCGCCGTTGGAGACCATA+AGG 0.520147 8.3:+13262287 MS.gene61497:CDS
ATGAGTATACTTGAAAAGGA+AGG 0.523641 8.3:+13263355 MS.gene61497:CDS
TGCGCCAAGCAAGGCTATTG+AGG 0.523731 8.3:+13262429 MS.gene61497:CDS
GCTCTAGATGGTATGTGCAT+AGG 0.534533 8.3:-13262863 None:intergenic
AATGTGATGACTCTACTAAT+GGG 0.537491 8.3:+13263217 MS.gene61497:CDS
TCTCTTGTAGTAATAAGAGT+TGG 0.538294 8.3:-13262016 None:intergenic
TATGGAAGTTGATGGATGGA+AGG 0.546620 8.3:+13262369 MS.gene61497:CDS
ATGAAAGGAAGAAATTTGAA+GGG 0.548190 8.3:+13262178 MS.gene61497:CDS
ATGAAAGAAATCCCAGCAGC+AGG 0.567386 8.3:-13263427 None:intergenic
CATCCGAGTTGCGCCAAGCA+AGG 0.570638 8.3:+13262420 MS.gene61497:CDS
TGCTTACGAGCCACCTCGAG+TGG 0.570787 8.3:-13263277 None:intergenic
GAAAGCCTTGGCATGATGAA+AGG 0.572710 8.3:+13262163 MS.gene61497:CDS
TCACTAAGAAGATTGATAAG+TGG 0.573509 8.3:+13262232 MS.gene61497:CDS
GCACCTGCAATTGACGAGGC+AGG 0.574219 8.3:-13262819 None:intergenic
TAGCCTTGCTTGGCGCAACT+CGG 0.575028 8.3:-13262423 None:intergenic
TGAGTATACTTGAAAAGGAA+GGG 0.583036 8.3:+13263356 MS.gene61497:CDS
TAAGGACACATTTGATGGTG+GGG 0.590066 8.3:+13262305 MS.gene61497:CDS
CTATTATGGAAGTTGATGGA+TGG 0.598174 8.3:+13262365 MS.gene61497:CDS
ATAAGGACACATTTGATGGT+GGG 0.598424 8.3:+13262304 MS.gene61497:CDS
TGTGTTACGAAGCTTGCAAG+AGG 0.600032 8.3:+13263449 MS.gene61497:CDS
GGATGGAAGGGATTGTTCAG+GGG 0.604327 8.3:+13262382 MS.gene61497:CDS
CATAAGGACACATTTGATGG+TGG 0.614477 8.3:+13262303 MS.gene61497:CDS
TGAAAGGAAGAAATTTGAAG+GGG 0.616068 8.3:+13262179 MS.gene61497:CDS
TCAAGGGTTACTTAATGGTG+CGG 0.622503 8.3:+13262123 MS.gene61497:CDS
TGTGTCCTTATGGTCTCCAA+CGG 0.625833 8.3:-13262292 None:intergenic
TGCAGTGTCAAGAACAGTTG+TGG 0.648720 8.3:+13262267 MS.gene61497:CDS
GGGATTACACCGATTAAACT+CGG 0.653059 8.3:-13263115 None:intergenic
TGCGGCATTGAAAGTTGTTG+AGG 0.653533 8.3:+13262141 MS.gene61497:CDS
TCGTAAGCATATGCAAGCTG+GGG 0.656654 8.3:+13263291 MS.gene61497:CDS
CAGTGCAACATTCCCACTCG+AGG 0.656752 8.3:+13263264 MS.gene61497:CDS
TGCAACATTCCCACTCGAGG+TGG 0.657208 8.3:+13263267 MS.gene61497:CDS
GCTTACGAGCCACCTCGAGT+GGG 0.658789 8.3:-13263276 None:intergenic
TACAGCACCTGCAATTGACG+AGG 0.676153 8.3:-13262823 None:intergenic
GGTCCAGCAGAGTTGTACAG+AGG 0.692859 8.3:+13263085 MS.gene61497:CDS
ACTAAGAAGATTGATAAGTG+GGG 0.694336 8.3:+13262234 MS.gene61497:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTTTTGTAACATAAACAA+TGG + chr8.3:13262957-13262976 MS.gene61497:intron 20.0%
!!! ACTAACAAATATGTAACTTT+TGG + chr8.3:13262679-13262698 MS.gene61497:intron 20.0%
!!! TAATATTTTTACACTCACAA+AGG - chr8.3:13262568-13262587 None:intergenic 20.0%
!!! TTATGTATGTTTTGTAATCT+TGG + chr8.3:13262465-13262484 MS.gene61497:intron 20.0%
! ATGAAAGGAAGAAATTTGAA+GGG + chr8.3:13262178-13262197 MS.gene61497:CDS 25.0%
! GATATAGTAATATGCAATTC+TGG + chr8.3:13261899-13261918 MS.gene61497:CDS 25.0%
! TTAACGTGAAATTCAAGATT+GGG + chr8.3:13262203-13262222 MS.gene61497:CDS 25.0%
! TTAAGTAACCCTTGAAAATT+TGG - chr8.3:13262118-13262137 None:intergenic 25.0%
! TTCATTGAAGAGTTAAGTAT+TGG - chr8.3:13262061-13262080 None:intergenic 25.0%
! TTTAACGTGAAATTCAAGAT+TGG + chr8.3:13262202-13262221 MS.gene61497:CDS 25.0%
! TTTATGCTTAATTGTAGAGA+GGG + chr8.3:13263014-13263033 MS.gene61497:intron 25.0%
!! AAATTTGGAGTTTGAAAAGT+AGG - chr8.3:13262103-13262122 None:intergenic 25.0%
!! AGTTTTTGCAAGTTTATATC+AGG + chr8.3:13262526-13262545 MS.gene61497:intron 25.0%
!! CAAGAAAGCTTTTAATAAAG+AGG + chr8.3:13263186-13263205 MS.gene61497:CDS 25.0%
!! CTTTTAATAAAGAGGAAGTT+GGG + chr8.3:13263194-13263213 MS.gene61497:CDS 25.0%
!! TGAAGTGTTTCAATCTATTA+TGG + chr8.3:13262351-13262370 MS.gene61497:CDS 25.0%
!! TTCAAACTCCAAATTTTCAA+GGG + chr8.3:13262107-13262126 MS.gene61497:CDS 25.0%
!! TTTCAAACTCCAAATTTTCA+AGG + chr8.3:13262106-13262125 MS.gene61497:CDS 25.0%
!!! AATTTTCAAGGGTTACTTAA+TGG + chr8.3:13262118-13262137 MS.gene61497:CDS 25.0%
AATGTGATGACTCTACTAAT+GGG + chr8.3:13263217-13263236 MS.gene61497:CDS 30.0%
ACTAAGAAGATTGATAAGTG+GGG + chr8.3:13262234-13262253 MS.gene61497:CDS 30.0%
ACTCATGAGTATACTTGAAA+AGG + chr8.3:13263351-13263370 MS.gene61497:CDS 30.0%
ATGAGTATACTTGAAAAGGA+AGG + chr8.3:13263355-13263374 MS.gene61497:CDS 30.0%
CAATCTATTATGGAAGTTGA+TGG + chr8.3:13262361-13262380 MS.gene61497:CDS 30.0%
CACTAAGAAGATTGATAAGT+GGG + chr8.3:13262233-13262252 MS.gene61497:CDS 30.0%
CTGGAATAAAGCTTGATTAT+GGG + chr8.3:13261918-13261937 MS.gene61497:CDS 30.0%
CTTATCAATCTTCTTAGTGA+TGG - chr8.3:13262232-13262251 None:intergenic 30.0%
GATGAAAGGAAGAAATTTGA+AGG + chr8.3:13262177-13262196 MS.gene61497:CDS 30.0%
GTTTATGCTTAATTGTAGAG+AGG + chr8.3:13263013-13263032 MS.gene61497:intron 30.0%
TCACTAAGAAGATTGATAAG+TGG + chr8.3:13262232-13262251 MS.gene61497:CDS 30.0%
TCTCTTGTAGTAATAAGAGT+TGG - chr8.3:13262019-13262038 None:intergenic 30.0%
TGAAAGGAAGAAATTTGAAG+GGG + chr8.3:13262179-13262198 MS.gene61497:CDS 30.0%
TGAGTATACTTGAAAAGGAA+GGG + chr8.3:13263356-13263375 MS.gene61497:CDS 30.0%
TTATGCTTAATTGTAGAGAG+GGG + chr8.3:13263015-13263034 MS.gene61497:intron 30.0%
! GCTTTTAATAAAGAGGAAGT+TGG + chr8.3:13263193-13263212 MS.gene61497:CDS 30.0%
! TCTGGAATAAAGCTTGATTA+TGG + chr8.3:13261917-13261936 MS.gene61497:CDS 30.0%
!! AGATAATTTGTTGCAGCATA+AGG - chr8.3:13263139-13263158 None:intergenic 30.0%
!! GATAATTTGTTGCAGCATAA+GGG - chr8.3:13263138-13263157 None:intergenic 30.0%
AAGCAATTGTCTCCTAAACT+TGG + chr8.3:13262774-13262793 MS.gene61497:CDS 35.0%
ATGCTTGCAAATAAGGTAGT+TGG - chr8.3:13261956-13261975 None:intergenic 35.0%
CTTGTAGTAATAAGAGTTGG+AGG - chr8.3:13262016-13262035 None:intergenic 35.0%
GAATGTGATGACTCTACTAA+TGG + chr8.3:13263216-13263235 MS.gene61497:CDS 35.0%
GTAATAAGAGTTGGAGGATT+TGG - chr8.3:13262010-13262029 None:intergenic 35.0%
GTAGGCTTATATAGAGGTTT+GGG + chr8.3:13263382-13263401 MS.gene61497:CDS 35.0%
GTGAGAATTGTTAGAGAAGA+AGG + chr8.3:13263064-13263083 MS.gene61497:CDS 35.0%
TAAAATTAGTTCCTGCTGCT+GGG + chr8.3:13263416-13263435 MS.gene61497:CDS 35.0%
TAAGCATAAACTCGTATCAG+TGG - chr8.3:13263004-13263023 None:intergenic 35.0%
TGTAGGCTTATATAGAGGTT+TGG + chr8.3:13263381-13263400 MS.gene61497:CDS 35.0%
TTAAAATTAGTTCCTGCTGC+TGG + chr8.3:13263415-13263434 MS.gene61497:CDS 35.0%
TTGACCAATGCTTGCAAATA+AGG - chr8.3:13261963-13261982 None:intergenic 35.0%
! ACTACCTTATTTGCAAGCAT+TGG + chr8.3:13261956-13261975 MS.gene61497:CDS 35.0%
! ATAAGGACACATTTGATGGT+GGG + chr8.3:13262304-13262323 MS.gene61497:CDS 35.0%
! GGAACTAATTTTAAGCAGCT+TGG - chr8.3:13263409-13263428 None:intergenic 35.0%
! TTGATAATTCTGCTCTCACA+TGG + chr8.3:13262934-13262953 MS.gene61497:intron 35.0%
!! CTATTATGGAAGTTGATGGA+TGG + chr8.3:13262365-13262384 MS.gene61497:CDS 35.0%
AAAGTTGTTGAGGAAAGCCT+TGG + chr8.3:13262151-13262170 MS.gene61497:CDS 40.0%
CAAAACTCGTCTAACTGTTC+AGG + chr8.3:13262890-13262909 MS.gene61497:CDS 40.0%
CACCATCAAATGTGTCCTTA+TGG - chr8.3:13262305-13262324 None:intergenic 40.0%
CATAAACTCGTATCAGTGGT+GGG - chr8.3:13263000-13263019 None:intergenic 40.0%
CATAAGGACACATTTGATGG+TGG + chr8.3:13262303-13262322 MS.gene61497:CDS 40.0%
CTCTAGATGGTATGTGCATA+GGG - chr8.3:13262865-13262884 None:intergenic 40.0%
GACCATAAGGACACATTTGA+TGG + chr8.3:13262300-13262319 MS.gene61497:CDS 40.0%
GGAGTTTGAAAAGTAGGTTC+AGG - chr8.3:13262097-13262116 None:intergenic 40.0%
TCAAGCTGGATTTGGATTTG+TGG + chr8.3:13261979-13261998 MS.gene61497:CDS 40.0%
TCAAGGGTTACTTAATGGTG+CGG + chr8.3:13262123-13262142 MS.gene61497:CDS 40.0%
TTCTTCCTTTCATCATGCCA+AGG - chr8.3:13262171-13262190 None:intergenic 40.0%
! GAGGCAGGAATTGGAATTTT+CGG - chr8.3:13262807-13262826 None:intergenic 40.0%
! GGGATTACACCGATTAAACT+CGG - chr8.3:13263118-13263137 None:intergenic 40.0%
!! AGGGGTGTACAAGAATTTTG+TGG + chr8.3:13263033-13263052 MS.gene61497:CDS 40.0%
!! ATGGAAGTTGATGGATGGAA+GGG + chr8.3:13262370-13262389 MS.gene61497:CDS 40.0%
!! TAAGGACACATTTGATGGTG+GGG + chr8.3:13262305-13262324 MS.gene61497:CDS 40.0%
!! TATGGAAGTTGATGGATGGA+AGG + chr8.3:13262369-13262388 MS.gene61497:CDS 40.0%
!!! AAGTATTGGACGACGTTTTG+TGG - chr8.3:13262047-13262066 None:intergenic 40.0%
!!! GAGTTTTGAGTAGCTCTAGA+TGG - chr8.3:13262878-13262897 None:intergenic 40.0%
ATGAAAGAAATCCCAGCAGC+AGG - chr8.3:13263430-13263449 None:intergenic 45.0%
ATGGATGGAAGGGATTGTTC+AGG + chr8.3:13262380-13262399 MS.gene61497:CDS 45.0%
CTCGTAAGCATATGCAAGCT+GGG + chr8.3:13263290-13263309 MS.gene61497:CDS 45.0%
CTTGAAAAGGAAGGGCTTGT+AGG + chr8.3:13263364-13263383 MS.gene61497:CDS 45.0%
GAAAGCCTTGGCATGATGAA+AGG + chr8.3:13262163-13262182 MS.gene61497:CDS 45.0%
GCATAAACTCGTATCAGTGG+TGG - chr8.3:13263001-13263020 None:intergenic 45.0%
GGACTGACACCGAGTTTAAT+CGG + chr8.3:13263106-13263125 MS.gene61497:CDS 45.0%
GGGATTGTTCAGGGGAAATT+TGG + chr8.3:13262390-13262409 MS.gene61497:CDS 45.0%
GGGCTTGTAGGCTTATATAG+AGG + chr8.3:13263376-13263395 MS.gene61497:CDS 45.0%
TCGTAAGCATATGCAAGCTG+GGG + chr8.3:13263291-13263310 MS.gene61497:CDS 45.0%
TGCAGTGTCAAGAACAGTTG+TGG + chr8.3:13262267-13262286 MS.gene61497:CDS 45.0%
TGGATGGAAGGGATTGTTCA+GGG + chr8.3:13262381-13262400 MS.gene61497:CDS 45.0%
TGTGTCCTTATGGTCTCCAA+CGG - chr8.3:13262295-13262314 None:intergenic 45.0%
TGTGTTACGAAGCTTGCAAG+AGG + chr8.3:13263449-13263468 MS.gene61497:CDS 45.0%
TTCGGCTGTTCTCCAAGTTT+AGG - chr8.3:13262789-13262808 None:intergenic 45.0%
TTGATAAGTGGGGCAATTGC+TGG + chr8.3:13262244-13262263 MS.gene61497:CDS 45.0%
! GCTCTAGATGGTATGTGCAT+AGG - chr8.3:13262866-13262885 None:intergenic 45.0%
! TGCGGCATTGAAAGTTGTTG+AGG + chr8.3:13262141-13262160 MS.gene61497:CDS 45.0%
!! AGCATTGGTCAAGCTGGATT+TGG + chr8.3:13261971-13261990 MS.gene61497:CDS 45.0%
!! TTTGCAAGCATTGGTCAAGC+TGG + chr8.3:13261965-13261984 MS.gene61497:CDS 45.0%
AGTCCTCTGTACAACTCTGC+TGG - chr8.3:13263091-13263110 None:intergenic 50.0%
ATTCCTGCCTCGTCAATTGC+AGG + chr8.3:13262816-13262835 MS.gene61497:CDS 50.0%
CTACTAATGGGATCAGCTGC+TGG + chr8.3:13263229-13263248 MS.gene61497:CDS 50.0%
GCAATTGACGAGGCAGGAAT+TGG - chr8.3:13262816-13262835 None:intergenic 50.0%
GCTCGTAAGCATATGCAAGC+TGG + chr8.3:13263289-13263308 MS.gene61497:CDS 50.0%
GGATGGAAGGGATTGTTCAG+GGG + chr8.3:13262382-13262401 MS.gene61497:CDS 50.0%
TACAGCACCTGCAATTGACG+AGG - chr8.3:13262826-13262845 None:intergenic 50.0%
! ATGCAAGCTGGGGCACTAAA+TGG + chr8.3:13263301-13263320 MS.gene61497:CDS 50.0%
! CTCACCTCAATAGCCTTGCT+TGG - chr8.3:13262436-13262455 None:intergenic 50.0%
! TCAATTGCAGGTGCTGTAGC+TGG + chr8.3:13262828-13262847 MS.gene61497:CDS 50.0%
!! CATTTGATGGTGGGGAGTTG+TGG + chr8.3:13262313-13262332 MS.gene61497:CDS 50.0%
AAGAACAGTTGTGGCGCCGT+TGG + chr8.3:13262276-13262295 MS.gene61497:CDS 55.0%
CAGTGCAACATTCCCACTCG+AGG + chr8.3:13263264-13263283 MS.gene61497:CDS 55.0%
GGTCCAGCAGAGTTGTACAG+AGG + chr8.3:13263085-13263104 MS.gene61497:CDS 55.0%
TGCAACATTCCCACTCGAGG+TGG + chr8.3:13263267-13263286 MS.gene61497:CDS 55.0%
TGCGCCAAGCAAGGCTATTG+AGG + chr8.3:13262429-13262448 MS.gene61497:CDS 55.0%
! TAGCCTTGCTTGGCGCAACT+CGG - chr8.3:13262426-13262445 None:intergenic 55.0%
CATCCGAGTTGCGCCAAGCA+AGG + chr8.3:13262420-13262439 MS.gene61497:CDS 60.0%
GCACCTGCAATTGACGAGGC+AGG - chr8.3:13262822-13262841 None:intergenic 60.0%
GCTTACGAGCCACCTCGAGT+GGG - chr8.3:13263279-13263298 None:intergenic 60.0%
TGCTTACGAGCCACCTCGAG+TGG - chr8.3:13263280-13263299 None:intergenic 60.0%
TGGCGCCGTTGGAGACCATA+AGG + chr8.3:13262287-13262306 MS.gene61497:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 13261875 13263498 13261875 ID=MS.gene61497
chr8.3 mRNA 13261875 13263498 13261875 ID=MS.gene61497.t1;Parent=MS.gene61497
chr8.3 exon 13261875 13262450 13261875 ID=MS.gene61497.t1.exon1;Parent=MS.gene61497.t1
chr8.3 CDS 13261875 13262450 13261875 ID=cds.MS.gene61497.t1;Parent=MS.gene61497.t1
chr8.3 exon 13262750 13262911 13262750 ID=MS.gene61497.t1.exon2;Parent=MS.gene61497.t1
chr8.3 CDS 13262750 13262911 13262750 ID=cds.MS.gene61497.t1;Parent=MS.gene61497.t1
chr8.3 exon 13263031 13263498 13263031 ID=MS.gene61497.t1.exon3;Parent=MS.gene61497.t1
chr8.3 CDS 13263031 13263498 13263031 ID=cds.MS.gene61497.t1;Parent=MS.gene61497.t1
Gene Sequence

>MS.gene61497

ATGGCTACTGAATCTGGTTATAGAGATATAGTAATATGCAATTCTGGAATAAAGCTTGATTATGGGACTAATCTTCATCCAACTACCTTATTTGCAAGCATTGGTCAAGCTGGATTTGGATTTGTGGCTTCACCAAATCCTCCAACTCTTATTACTACAAGAGATAGTGCCACAAAACGTCGTCCAATACTTAACTCTTCAATGAAATATGCTTTAATTCCTGAACCTACTTTTCAAACTCCAAATTTTCAAGGGTTACTTAATGGTGCGGCATTGAAAGTTGTTGAGGAAAGCCTTGGCATGATGAAAGGAAGAAATTTGAAGGGGTTTAACGTGAAATTCAAGATTGGGAATCCATCACTAAGAAGATTGATAAGTGGGGCAATTGCTGGTGCAGTGTCAAGAACAGTTGTGGCGCCGTTGGAGACCATAAGGACACATTTGATGGTGGGGAGTTGTGGACATAATACAACTCGTGAAGTGTTTCAATCTATTATGGAAGTTGATGGATGGAAGGGATTGTTCAGGGGAAATTTGGTGAATATCATCCGAGTTGCGCCAAGCAAGGCTATTGAGGTGAGTACGACGATTTATGTATGTTTTGTAATCTTGGATTAGAAGATATCATGATAGATGTATGTGATCATTTTGAGTTTTTGCAAGTTTATATCAGGTTAGTTTAATTCATGTCCTTTGTGAGTGTAAAAATATTATACACAATCAATCGTAATCGTCAAATCATTAAAAACGTTTGAATTTAATCGTCACTATTTCTAAAGTCACACATATCGTCATATCATTATAACTAACAAATATGTAACTTTTGGCATGAGTTCAACATATTGACACTGTGATTACGTGTTAATGACGTGCAGTTATTTGCATATGATACTGTCAAGAAGCAATTGTCTCCTAAACTTGGAGAACAGCCGAAAATTCCAATTCCTGCCTCGTCAATTGCAGGTGCTGTAGCTGGAGTTAGCTCTACCCTATGCACATACCATCTAGAGCTACTCAAAACTCGTCTAACTGTTCAGGTATGCACTCAATGATAGAAACTTGATAATTCTGCTCTCACATGGAACTTTTGTAACATAAACAATGGTGTAATACATTGATGATCCCACCACTGATACGAGTTTATGCTTAATTGTAGAGAGGGGTGTACAAGAATTTTGTGGATGCATTTGTGAGAATTGTTAGAGAAGAAGGTCCAGCAGAGTTGTACAGAGGACTGACACCGAGTTTAATCGGTGTAATCCCTTATGCTGCAACAAATTATCTAGCTTATGACACACTTAGAAAAGCTTACAAGAAAGCTTTTAATAAAGAGGAAGTTGGGAATGTGATGACTCTACTAATGGGATCAGCTGCTGGAGCATTTTCATGCAGTGCAACATTCCCACTCGAGGTGGCTCGTAAGCATATGCAAGCTGGGGCACTAAATGGAAGACAATACAGTAACATGCTTCAAGCACTCATGAGTATACTTGAAAAGGAAGGGCTTGTAGGCTTATATAGAGGTTTGGGACCAAGCTGCTTAAAATTAGTTCCTGCTGCTGGGATTTCTTTCATGTGTTACGAAGCTTGCAAGAGGTTACTTGTTGAAAATGAAGAAAATTAG

Protein sequence

>MS.gene61497.t1

MATESGYRDIVICNSGIKLDYGTNLHPTTLFASIGQAGFGFVASPNPPTLITTRDSATKRRPILNSSMKYALIPEPTFQTPNFQGLLNGAALKVVEESLGMMKGRNLKGFNVKFKIGNPSLRRLISGAIAGAVSRTVVAPLETIRTHLMVGSCGHNTTREVFQSIMEVDGWKGLFRGNLVNIIRVAPSKAIELFAYDTVKKQLSPKLGEQPKIPIPASSIAGAVAGVSSTLCTYHLELLKTRLTVQRGVYKNFVDAFVRIVREEGPAELYRGLTPSLIGVIPYAATNYLAYDTLRKAYKKAFNKEEVGNVMTLLMGSAAGAFSCSATFPLEVARKHMQAGALNGRQYSNMLQALMSILEKEGLVGLYRGLGPSCLKLVPAAGISFMCYEACKRLLVENEEN