Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67462.t1 | XP_003612202.2 | 96.8 | 1176 | 37 | 1 | 1 | 1176 | 25 | 1199 | 0.00E+00 | 2181.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67462.t1 | Q9SXL4 | 65.8 | 1195 | 362 | 14 | 6 | 1176 | 28 | 1199 | 0.0e+00 | 1437.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67462.t1 | G7JXI9 | 96.8 | 1176 | 37 | 1 | 1 | 1176 | 25 | 1199 | 0.0e+00 | 2181.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene67462.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene67462 | -0.819476 | 1.14E-52 | -1.69E-46 |
| MS.gene04921 | MS.gene67462 | 0.800841 | 1.19E-48 | -1.69E-46 |
| MS.gene049611 | MS.gene67462 | 0.801735 | 7.83E-49 | -1.69E-46 |
| MS.gene050082 | MS.gene67462 | 0.830692 | 2.54E-55 | -1.69E-46 |
| MS.gene050165 | MS.gene67462 | -0.806106 | 9.66E-50 | -1.69E-46 |
| MS.gene050170 | MS.gene67462 | -0.814192 | 1.75E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene67462 | -0.804437 | 2.16E-49 | -1.69E-46 |
| MS.gene050338 | MS.gene67462 | 0.819918 | 9.02E-53 | -1.69E-46 |
| MS.gene050496 | MS.gene67462 | -0.803627 | 3.19E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene67462 | -0.819366 | 1.21E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene67462 | -0.819791 | 9.65E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene67462 | -0.831749 | 1.40E-55 | -1.69E-46 |
| MS.gene050832 | MS.gene67462 | 0.800721 | 1.26E-48 | -1.69E-46 |
| MS.gene050868 | MS.gene67462 | -0.807053 | 6.10E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene67462 | -0.804108 | 2.53E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene67462 | -0.846728 | 1.81E-59 | -1.69E-46 |
| MS.gene05104 | MS.gene67462 | 0.808713 | 2.71E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene67462 | 0.85261 | 4.12E-61 | -1.69E-46 |
| MS.gene051317 | MS.gene67462 | -0.817972 | 2.50E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene67462 | 0.835663 | 1.47E-56 | -1.69E-46 |
| MS.gene051366 | MS.gene67462 | 0.836291 | 1.02E-56 | -1.69E-46 |
| MS.gene051367 | MS.gene67462 | 0.82209 | 2.85E-53 | -1.69E-46 |
| MS.gene051422 | MS.gene67462 | 0.815835 | 7.54E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene67462 | 0.826883 | 2.12E-54 | -1.69E-46 |
| MS.gene051749 | MS.gene67462 | 0.829317 | 5.51E-55 | -1.69E-46 |
| MS.gene052129 | MS.gene67462 | 0.803414 | 3.53E-49 | -1.69E-46 |
| MS.gene052164 | MS.gene67462 | -0.807979 | 3.88E-50 | -1.69E-46 |
| MS.gene05240 | MS.gene67462 | 0.809929 | 1.48E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene67462 | -0.810685 | 1.02E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene67462 | -0.810637 | 1.04E-50 | -1.69E-46 |
| MS.gene052606 | MS.gene67462 | 0.846368 | 2.27E-59 | -1.69E-46 |
| MS.gene053031 | MS.gene67462 | 0.803887 | 2.81E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene67462 | 0.845096 | 5.03E-59 | -1.69E-46 |
| MS.gene053776 | MS.gene67462 | 0.809829 | 1.56E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene67462 | 0.81672 | 4.78E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene67462 | -0.821951 | 3.07E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene67462 | 0.801226 | 9.95E-49 | -1.69E-46 |
| MS.gene055158 | MS.gene67462 | 0.858269 | 9.25E-63 | -1.69E-46 |
| MS.gene055202 | MS.gene67462 | 0.800277 | 1.55E-48 | -1.69E-46 |
| MS.gene055502 | MS.gene67462 | -0.815322 | 9.81E-52 | -1.69E-46 |
| MS.gene055748 | MS.gene67462 | -0.833982 | 3.90E-56 | -1.69E-46 |
| MS.gene055750 | MS.gene67462 | -0.808046 | 3.75E-50 | -1.69E-46 |
| MS.gene055751 | MS.gene67462 | -0.838907 | 2.18E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene67462 | -0.844976 | 5.41E-59 | -1.69E-46 |
| MS.gene056218 | MS.gene67462 | 0.821644 | 3.62E-53 | -1.69E-46 |
| MS.gene056224 | MS.gene67462 | 0.81928 | 1.26E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene67462 | -0.831202 | 1.91E-55 | -1.69E-46 |
| MS.gene056692 | MS.gene67462 | -0.825426 | 4.72E-54 | -1.69E-46 |
| MS.gene056694 | MS.gene67462 | 0.812867 | 3.42E-51 | -1.69E-46 |
| MS.gene056748 | MS.gene67462 | 0.8142 | 1.74E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene67462 | 0.87641 | 1.43E-68 | -1.69E-46 |
| MS.gene057768 | MS.gene67462 | 0.851 | 1.18E-60 | -1.69E-46 |
| MS.gene058099 | MS.gene67462 | 0.816509 | 5.33E-52 | -1.69E-46 |
| MS.gene058111 | MS.gene67462 | 0.830272 | 3.23E-55 | -1.69E-46 |
| MS.gene058117 | MS.gene67462 | 0.80443 | 2.17E-49 | -1.69E-46 |
| MS.gene058171 | MS.gene67462 | 0.840856 | 6.76E-58 | -1.69E-46 |
| MS.gene058173 | MS.gene67462 | 0.833265 | 5.89E-56 | -1.69E-46 |
| MS.gene058175 | MS.gene67462 | 0.846364 | 2.28E-59 | -1.69E-46 |
| MS.gene058334 | MS.gene67462 | 0.842924 | 1.92E-58 | -1.69E-46 |
| MS.gene058603 | MS.gene67462 | 0.813224 | 2.85E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene67462 | -0.815638 | 8.34E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene67462 | -0.804339 | 2.26E-49 | -1.69E-46 |
| MS.gene059526 | MS.gene67462 | 0.831479 | 1.63E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene67462 | -0.809605 | 1.74E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene67462 | -0.827324 | 1.67E-54 | -1.69E-46 |
| MS.gene059955 | MS.gene67462 | 0.800761 | 1.24E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene67462 | -0.833464 | 5.25E-56 | -1.69E-46 |
| MS.gene060593 | MS.gene67462 | 0.800467 | 1.42E-48 | -1.69E-46 |
| MS.gene060595 | MS.gene67462 | 0.801994 | 6.93E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene67462 | -0.834028 | 3.80E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene67462 | -0.819119 | 1.37E-52 | -1.69E-46 |
| MS.gene060823 | MS.gene67462 | 0.873366 | 1.55E-67 | -1.69E-46 |
| MS.gene06084 | MS.gene67462 | 0.804497 | 2.10E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene67462 | -0.820397 | 7.01E-53 | -1.69E-46 |
| MS.gene061044 | MS.gene67462 | 0.833745 | 4.47E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67462.t1 | MTR_5g022470 | 97.789 | 1176 | 25 | 1 | 1 | 1176 | 25 | 1199 | 0.0 | 2402 |
| MS.gene67462.t1 | MTR_5g022470 | 97.651 | 1107 | 25 | 1 | 1 | 1107 | 25 | 1130 | 0.0 | 2254 |
| MS.gene67462.t1 | MTR_8g075340 | 73.505 | 1204 | 258 | 11 | 1 | 1177 | 1 | 1170 | 0.0 | 1755 |
| MS.gene67462.t1 | MTR_1g087140 | 32.812 | 384 | 216 | 10 | 397 | 750 | 301 | 672 | 1.01e-40 | 164 |
| MS.gene67462.t1 | MTR_1g087140 | 32.237 | 152 | 79 | 4 | 1010 | 1160 | 956 | 1084 | 4.62e-15 | 80.9 |
| MS.gene67462.t1 | MTR_1g090850 | 31.429 | 385 | 236 | 7 | 384 | 750 | 280 | 654 | 2.62e-40 | 162 |
| MS.gene67462.t1 | MTR_1g090850 | 38.129 | 139 | 63 | 5 | 1022 | 1160 | 921 | 1036 | 7.09e-16 | 83.6 |
| MS.gene67462.t1 | MTR_8g080770 | 34.062 | 320 | 187 | 6 | 438 | 740 | 236 | 548 | 3.59e-38 | 155 |
| MS.gene67462.t1 | MTR_8g080770 | 34.722 | 144 | 62 | 2 | 1024 | 1161 | 729 | 846 | 7.32e-18 | 90.1 |
| MS.gene67462.t1 | MTR_3g085130 | 31.165 | 369 | 223 | 9 | 380 | 730 | 141 | 496 | 3.82e-38 | 154 |
| MS.gene67462.t1 | MTR_3g085130 | 34.932 | 146 | 64 | 2 | 1021 | 1161 | 690 | 809 | 1.21e-16 | 85.9 |
| MS.gene67462.t1 | MTR_8g080770 | 34.062 | 320 | 187 | 6 | 438 | 740 | 345 | 657 | 5.08e-38 | 155 |
| MS.gene67462.t1 | MTR_8g080770 | 34.722 | 144 | 62 | 2 | 1024 | 1161 | 838 | 955 | 7.85e-18 | 90.1 |
| MS.gene67462.t1 | MTR_3g085130 | 30.607 | 379 | 232 | 9 | 380 | 740 | 351 | 716 | 1.05e-37 | 154 |
| MS.gene67462.t1 | MTR_3g085130 | 34.932 | 146 | 64 | 2 | 1021 | 1161 | 900 | 1019 | 1.33e-16 | 85.9 |
| MS.gene67462.t1 | MTR_8g106150 | 33.036 | 336 | 191 | 7 | 438 | 740 | 336 | 670 | 1.04e-35 | 147 |
| MS.gene67462.t1 | MTR_8g106150 | 31.953 | 169 | 74 | 4 | 1024 | 1177 | 858 | 1000 | 2.46e-15 | 82.0 |
| MS.gene67462.t1 | MTR_8g106150 | 33.036 | 336 | 191 | 7 | 438 | 740 | 93 | 427 | 1.56e-35 | 146 |
| MS.gene67462.t1 | MTR_8g106150 | 31.953 | 169 | 74 | 4 | 1024 | 1177 | 615 | 757 | 1.94e-15 | 82.0 |
| MS.gene67462.t1 | MTR_5g097410 | 30.982 | 326 | 191 | 6 | 440 | 740 | 572 | 888 | 7.78e-32 | 135 |
| MS.gene67462.t1 | MTR_5g097410 | 30.994 | 171 | 68 | 4 | 1015 | 1161 | 1056 | 1200 | 2.31e-13 | 75.5 |
| MS.gene67462.t1 | MTR_7g109150 | 33.721 | 258 | 145 | 4 | 475 | 730 | 334 | 567 | 1.12e-31 | 133 |
| MS.gene67462.t1 | MTR_4g031150 | 32.210 | 267 | 154 | 5 | 475 | 739 | 383 | 624 | 4.30e-29 | 125 |
| MS.gene67462.t1 | MTR_3g105590 | 30.537 | 298 | 158 | 6 | 488 | 752 | 373 | 654 | 1.20e-25 | 115 |
| MS.gene67462.t1 | MTR_1g013360 | 28.939 | 311 | 171 | 6 | 488 | 750 | 379 | 687 | 4.44e-24 | 110 |
| MS.gene67462.t1 | MTR_7g116330 | 25.228 | 329 | 216 | 5 | 474 | 797 | 364 | 667 | 2.14e-14 | 78.6 |
| MS.gene67462.t1 | MTR_1g073840 | 31.655 | 139 | 94 | 1 | 475 | 613 | 355 | 492 | 3.43e-12 | 71.2 |
| MS.gene67462.t1 | MTR_8g019680 | 52.381 | 63 | 26 | 2 | 1098 | 1160 | 79 | 137 | 8.16e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67462.t1 | AT2G17820 | 65.468 | 1196 | 368 | 13 | 4 | 1176 | 26 | 1199 | 0.0 | 1578 |
| MS.gene67462.t1 | AT2G47430 | 26.020 | 1103 | 640 | 34 | 160 | 1161 | 81 | 1108 | 3.68e-73 | 266 |
| MS.gene67462.t1 | AT1G27320 | 34.036 | 332 | 209 | 4 | 435 | 757 | 400 | 730 | 1.27e-41 | 167 |
| MS.gene67462.t1 | AT1G27320 | 32.051 | 156 | 62 | 2 | 1024 | 1161 | 887 | 1016 | 7.96e-15 | 80.1 |
| MS.gene67462.t1 | AT2G01830 | 32.727 | 330 | 195 | 6 | 444 | 748 | 431 | 758 | 1.71e-41 | 166 |
| MS.gene67462.t1 | AT2G01830 | 33.540 | 161 | 75 | 2 | 1021 | 1175 | 939 | 1073 | 6.57e-17 | 87.0 |
| MS.gene67462.t1 | AT2G01830 | 33.230 | 322 | 188 | 6 | 444 | 740 | 420 | 739 | 1.96e-41 | 166 |
| MS.gene67462.t1 | AT2G01830 | 33.540 | 161 | 75 | 2 | 1021 | 1175 | 928 | 1062 | 8.29e-17 | 86.7 |
| MS.gene67462.t1 | AT2G01830 | 32.727 | 330 | 195 | 6 | 444 | 748 | 408 | 735 | 2.23e-41 | 166 |
| MS.gene67462.t1 | AT2G01830 | 33.540 | 161 | 75 | 2 | 1021 | 1175 | 916 | 1050 | 8.53e-17 | 86.7 |
| MS.gene67462.t1 | AT2G01830 | 32.727 | 330 | 195 | 6 | 444 | 748 | 408 | 735 | 2.23e-41 | 166 |
| MS.gene67462.t1 | AT2G01830 | 33.540 | 161 | 75 | 2 | 1021 | 1175 | 916 | 1050 | 8.53e-17 | 86.7 |
| MS.gene67462.t1 | AT2G01830 | 32.727 | 330 | 195 | 6 | 444 | 748 | 408 | 735 | 2.23e-41 | 166 |
| MS.gene67462.t1 | AT2G01830 | 33.540 | 161 | 75 | 2 | 1021 | 1175 | 916 | 1050 | 8.53e-17 | 86.7 |
| MS.gene67462.t1 | AT2G01830 | 32.727 | 330 | 195 | 6 | 444 | 748 | 408 | 735 | 2.23e-41 | 166 |
| MS.gene67462.t1 | AT2G01830 | 33.540 | 161 | 75 | 2 | 1021 | 1175 | 916 | 1050 | 8.53e-17 | 86.7 |
| MS.gene67462.t1 | AT5G35750 | 26.454 | 533 | 313 | 13 | 438 | 935 | 540 | 1028 | 2.55e-38 | 156 |
| MS.gene67462.t1 | AT5G35750 | 28.313 | 166 | 75 | 2 | 1028 | 1175 | 1036 | 1175 | 9.98e-15 | 80.1 |
| MS.gene67462.t1 | AT1G66340 | 32.453 | 265 | 152 | 5 | 475 | 739 | 333 | 570 | 2.02e-32 | 136 |
| MS.gene67462.t1 | AT5G10720 | 30.422 | 332 | 198 | 6 | 488 | 803 | 369 | 683 | 2.28e-29 | 127 |
| MS.gene67462.t1 | AT2G40940 | 31.884 | 276 | 158 | 5 | 459 | 728 | 313 | 564 | 1.26e-28 | 123 |
| MS.gene67462.t1 | AT3G04580 | 33.553 | 152 | 72 | 4 | 1019 | 1169 | 634 | 757 | 2.88e-13 | 75.1 |
| MS.gene67462.t1 | AT3G04580 | 26.100 | 341 | 211 | 12 | 473 | 797 | 355 | 670 | 8.90e-13 | 73.6 |
| MS.gene67462.t1 | AT3G04580 | 33.553 | 152 | 72 | 4 | 1019 | 1169 | 634 | 757 | 2.88e-13 | 75.1 |
| MS.gene67462.t1 | AT3G04580 | 26.100 | 341 | 211 | 12 | 473 | 797 | 355 | 670 | 8.90e-13 | 73.6 |
Find 186 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGACGAAGCTCTGTCTTTA+TGG | 0.133084 | 5.1:-13499484 | None:intergenic |
| TTAAATCCTTCAAGATTTAT+TGG | 0.172560 | 5.1:-13499291 | None:intergenic |
| TGTTGCAAAGTTTGTTTCTT+TGG | 0.177886 | 5.1:-13499802 | None:intergenic |
| TCATCGGTTAACTTTAAAAT+TGG | 0.200671 | 5.1:-13499714 | None:intergenic |
| CCGTCTTCTTAACAACATAT+TGG | 0.249014 | 5.1:+13497073 | MS.gene67462:CDS |
| GAGTCACCTCTAACTAATTT+TGG | 0.254567 | 5.1:-13497634 | None:intergenic |
| TTCTTCTAATAAAAGTATTA+TGG | 0.254759 | 5.1:+13495589 | MS.gene67462:CDS |
| GTTGCAACCCTTTGAATTAC+TGG | 0.261968 | 5.1:-13499915 | None:intergenic |
| GCCAATTGACTTCAAGCTTA+TGG | 0.265808 | 5.1:+13500693 | MS.gene67462:CDS |
| GCTTGCACTACAAGGCAATA+TGG | 0.271450 | 5.1:+13499122 | MS.gene67462:CDS |
| TTCGGCAGCTTTACCTGTTT+GGG | 0.279753 | 5.1:+13495565 | MS.gene67462:CDS |
| TTTCGGCAGCTTTACCTGTT+TGG | 0.281134 | 5.1:+13495564 | MS.gene67462:CDS |
| ACACCTATGGCAGCAGTAAT+TGG | 0.293817 | 5.1:+13496960 | MS.gene67462:CDS |
| CTCTTTGCATGACTTGCATT+TGG | 0.297699 | 5.1:-13497988 | None:intergenic |
| TCAATATGATTTGATCCTAA+TGG | 0.301867 | 5.1:+13500097 | MS.gene67462:CDS |
| AAGGAAGTCTCTTCAAGTTT+AGG | 0.303079 | 5.1:-13495931 | None:intergenic |
| GCCTCATATCCATCCATCTT+TGG | 0.303088 | 5.1:-13500541 | None:intergenic |
| CATCAAAGTTGTTATTGTTA+TGG | 0.314539 | 5.1:-13499260 | None:intergenic |
| TGAACCTCATGAGTTGAATT+AGG | 0.323329 | 5.1:-13495857 | None:intergenic |
| CATGCCAACCTTAAGGCATT+TGG | 0.328149 | 5.1:-13500653 | None:intergenic |
| TGTCCCATGATATACTTTCT+TGG | 0.328708 | 5.1:-13496438 | None:intergenic |
| GGACTATCGTTGCAAGAGTT+TGG | 0.330068 | 5.1:-13497910 | None:intergenic |
| TCTCTTCAAGTTTAGGTAGA+AGG | 0.331912 | 5.1:-13495924 | None:intergenic |
| AGTGGATGCTCTTAATTATA+TGG | 0.332374 | 5.1:+13499995 | MS.gene67462:CDS |
| TTGCAACACAAGCTTATGAT+AGG | 0.334949 | 5.1:+13499817 | MS.gene67462:CDS |
| TTGACTTAAGCACAGATATA+TGG | 0.337006 | 5.1:+13499382 | MS.gene67462:CDS |
| AACTTCCTTCACAAGTATTT+CGG | 0.341250 | 5.1:+13499417 | MS.gene67462:CDS |
| GTAATGTTAGCCATCTTGAT+AGG | 0.342025 | 5.1:+13494273 | MS.gene67462:CDS |
| GAACAAGATTCTTCTTTCCT+TGG | 0.344279 | 5.1:-13499762 | None:intergenic |
| ACATGTTTAATAGACTATTC+AGG | 0.345267 | 5.1:+13493968 | MS.gene67462:CDS |
| GCTTACAGTCTAGTAGTTGA+TGG | 0.352312 | 5.1:-13498226 | None:intergenic |
| AGAAATCAAGGTTACCAAAA+AGG | 0.359146 | 5.1:+13498859 | MS.gene67462:CDS |
| AGCAGGACTTTCACAAGTTC+CGG | 0.361656 | 5.1:+13495487 | MS.gene67462:CDS |
| TATGTACATTTCTAGGTTGT+TGG | 0.363384 | 5.1:-13500742 | None:intergenic |
| TACAGATTCGCCTTTGCTTT+CGG | 0.364558 | 5.1:+13495547 | MS.gene67462:CDS |
| TGTGAAATGCCATGTTAATA+TGG | 0.365711 | 5.1:-13494304 | None:intergenic |
| AGAAATCACTTGAAGGGTTA+AGG | 0.373683 | 5.1:+13499871 | MS.gene67462:CDS |
| GAGTGGTTGCAGAGAACTAA+TGG | 0.374626 | 5.1:+13495824 | MS.gene67462:CDS |
| TGAGAGATCTTTCAAAACTT+TGG | 0.380308 | 5.1:+13496467 | MS.gene67462:CDS |
| AACCGATGAAAATGAACATT+TGG | 0.389298 | 5.1:+13499728 | MS.gene67462:CDS |
| TATTCAGGTTTACCAATTCA+TGG | 0.394690 | 5.1:+13493983 | MS.gene67462:CDS |
| GACAGTGACTACTAGCATAT+TGG | 0.397259 | 5.1:-13494068 | None:intergenic |
| AGGCATGGAGGGACTGGTCT+AGG | 0.397957 | 5.1:+13498525 | MS.gene67462:intron |
| ACCATAAGCTTGAAGTCAAT+TGG | 0.402673 | 5.1:-13500694 | None:intergenic |
| CCCTTTCAACTCATCAAGCT+TGG | 0.402852 | 5.1:+13495345 | MS.gene67462:CDS |
| GCTATGTTGATCAAATCTTC+TGG | 0.404417 | 5.1:-13495467 | None:intergenic |
| ACTTGCTCAGCTTGAGATGC+AGG | 0.406924 | 5.1:-13494489 | None:intergenic |
| TGGAAAATTCTTCTACCTCT+TGG | 0.415464 | 5.1:-13494021 | None:intergenic |
| ATGAGGCAACAAAAGCAATA+AGG | 0.417051 | 5.1:+13500557 | MS.gene67462:CDS |
| TCCACAGCCATCTTAAGCTT+TGG | 0.417058 | 5.1:-13495770 | None:intergenic |
| TAGTTAGAGGTGACTCTGGC+AGG | 0.423741 | 5.1:+13497641 | MS.gene67462:CDS |
| GAGATAACAAAGTGATACTT+TGG | 0.425255 | 5.1:+13498022 | MS.gene67462:CDS |
| TGGGATGACAAAACAATTCA+TGG | 0.425736 | 5.1:+13495365 | MS.gene67462:CDS |
| AACACAGAATCCCATTTGCT+TGG | 0.425807 | 5.1:-13498181 | None:intergenic |
| TTTGACAGACAATGGCTTAG+TGG | 0.429155 | 5.1:+13498961 | MS.gene67462:CDS |
| CTCCAATGGGCAATAAATAT+AGG | 0.429398 | 5.1:+13493944 | None:intergenic |
| TGTGGTTAGATTAGCAATCA+TGG | 0.432976 | 5.1:+13494113 | MS.gene67462:CDS |
| TACACTATATAGGTGGAGTC+TGG | 0.435729 | 5.1:+13497215 | MS.gene67462:intron |
| TTTGATCCTAATGGATTGTC+AGG | 0.439291 | 5.1:+13500106 | MS.gene67462:CDS |
| AAACTTGAAGAGACTTCCTT+TGG | 0.443045 | 5.1:+13495934 | MS.gene67462:CDS |
| TCTTTGCATCGTTAGGAACT+TGG | 0.444026 | 5.1:+13498548 | MS.gene67462:CDS |
| TAGGTATCGATCCAAGCAAA+TGG | 0.444365 | 5.1:+13498170 | MS.gene67462:intron |
| CCTTTCAACTCATCAAGCTT+GGG | 0.447280 | 5.1:+13495346 | MS.gene67462:CDS |
| TTTGGCTTTGTTGTCTTCAG+AGG | 0.447460 | 5.1:-13499784 | None:intergenic |
| TTAGGATCAAATCATATTGA+TGG | 0.448278 | 5.1:-13500094 | None:intergenic |
| GATATGCCAAAATTAGTTAG+AGG | 0.449305 | 5.1:+13497628 | MS.gene67462:CDS |
| TATTTCAGGCATGGAGGGAC+TGG | 0.458163 | 5.1:+13498519 | MS.gene67462:intron |
| TCGGAAAGGACACTTACTAA+TGG | 0.460922 | 5.1:+13499503 | MS.gene67462:CDS |
| AAGCATCCATGCCAACCTTA+AGG | 0.465093 | 5.1:-13500660 | None:intergenic |
| TACCTATATTTATTGCCCAT+TGG | 0.466197 | 5.1:-13493946 | None:intergenic |
| ATATTCCACATCCTCAAAAT+CGG | 0.469359 | 5.1:-13494393 | None:intergenic |
| TGGTTTAGTGAGTGAGAGAA+TGG | 0.469497 | 5.1:-13500722 | None:intergenic |
| CTTGCACTACAAGGCAATAT+GGG | 0.472560 | 5.1:+13499123 | MS.gene67462:CDS |
| CATTATCCAATAAATCTTGA+AGG | 0.473443 | 5.1:+13499285 | MS.gene67462:CDS |
| AGGAAATCAGAGGAAGGAAC+AGG | 0.483804 | 5.1:+13500577 | MS.gene67462:CDS |
| CATACCAAGAAAGTATATCA+TGG | 0.484306 | 5.1:+13496434 | MS.gene67462:CDS |
| CTTCATCACAAGACATTGCA+TGG | 0.484352 | 5.1:-13500630 | None:intergenic |
| ATAACAATCAATTACAAGAA+TGG | 0.485356 | 5.1:+13495215 | MS.gene67462:CDS |
| TGTATGACAGTCATGAACTA+AGG | 0.486515 | 5.1:+13496937 | MS.gene67462:intron |
| CAGGTATTGCTTGCACTACA+AGG | 0.486574 | 5.1:+13499114 | MS.gene67462:intron |
| AATGATAAGAAATCACTTGA+AGG | 0.487266 | 5.1:+13499864 | MS.gene67462:CDS |
| TGATGAAGCCAAATGCCTTA+AGG | 0.487966 | 5.1:+13500645 | MS.gene67462:CDS |
| TTTGTCATTGTTGTTGACAT+TGG | 0.490082 | 5.1:+13499354 | MS.gene67462:CDS |
| GCCAAAGATGGATGGATATG+AGG | 0.491952 | 5.1:+13500540 | MS.gene67462:CDS |
| AAAAGTATTATGGCTGTTGT+TGG | 0.492363 | 5.1:+13495599 | MS.gene67462:CDS |
| CTCTTCCGAAATACTTGTGA+AGG | 0.492381 | 5.1:-13499422 | None:intergenic |
| GTTGTTGTTGCTGTAGGTGA+TGG | 0.497897 | 5.1:+13499963 | MS.gene67462:CDS |
| CCAAGCTTGATGAGTTGAAA+GGG | 0.499413 | 5.1:-13495345 | None:intergenic |
| ACAGCCATCTTAAGCTTTGG+TGG | 0.499420 | 5.1:-13495767 | None:intergenic |
| TTCATACCTGACAATCCATT+AGG | 0.501681 | 5.1:-13500112 | None:intergenic |
| TAAGATGGGTGGAGAAATCA+AGG | 0.502216 | 5.1:+13498847 | MS.gene67462:CDS |
| GCCATCTTAAGCTTTGGTGG+TGG | 0.502735 | 5.1:-13495764 | None:intergenic |
| GATACTTTGGTTTGAAGTTG+AGG | 0.505428 | 5.1:+13498035 | MS.gene67462:CDS |
| GTCTAGGTCTTTGCATCGTT+AGG | 0.507867 | 5.1:+13498541 | MS.gene67462:CDS |
| TGCCATGTAGCTACACCATC+CGG | 0.509110 | 5.1:-13495506 | None:intergenic |
| TACTAAGCATCAAAGATATG+AGG | 0.509714 | 5.1:+13499322 | MS.gene67462:CDS |
| TTATTAGAAGAATCCCAAAC+AGG | 0.512019 | 5.1:-13495578 | None:intergenic |
| CATGTTGAGAATGCTAAGCT+AGG | 0.514123 | 5.1:+13495878 | MS.gene67462:CDS |
| ACTTGGGACGCGAACTTGAA+GGG | 0.516777 | 5.1:+13497267 | MS.gene67462:CDS |
| AAGATACACCAGTAATTCAA+AGG | 0.521392 | 5.1:+13499907 | MS.gene67462:CDS |
| TTCTGAAATTACAACAGCTC+AGG | 0.525125 | 5.1:+13494428 | MS.gene67462:CDS |
| AGTGGTTGCAGAGAACTAAT+GGG | 0.526955 | 5.1:+13495825 | MS.gene67462:CDS |
| TTCCGGATGGTGTAGCTACA+TGG | 0.528222 | 5.1:+13495504 | MS.gene67462:CDS |
| GAAGTTGAGGACACAGGCTG+TGG | 0.528521 | 5.1:+13498048 | MS.gene67462:CDS |
| TGGGCTGTTAGAGCAACAAT+TGG | 0.530197 | 5.1:-13500610 | None:intergenic |
| TTACTTATTTCAGGCATGGA+GGG | 0.534505 | 5.1:+13498514 | MS.gene67462:intron |
| GTCAATTCCTTGCAAACATG+AGG | 0.534970 | 5.1:+13496646 | MS.gene67462:CDS |
| GCTTTAAATTTGACAGACAA+TGG | 0.536936 | 5.1:+13498953 | MS.gene67462:CDS |
| TGGATGGCAGGTTAATAAGA+TGG | 0.537101 | 5.1:+13498832 | MS.gene67462:intron |
| AGATCTTTCAAATTACTCCA+TGG | 0.538971 | 5.1:+13495295 | MS.gene67462:CDS |
| GGAGCTGTTGTTGTTGCTGT+AGG | 0.539267 | 5.1:+13499957 | MS.gene67462:CDS |
| GGATGGCAGGTTAATAAGAT+GGG | 0.539780 | 5.1:+13498833 | MS.gene67462:intron |
| GACTTGGGACGCGAACTTGA+AGG | 0.541648 | 5.1:+13497266 | MS.gene67462:CDS |
| TTTGCTTCTTAGTGTACCAA+TGG | 0.542330 | 5.1:+13498910 | MS.gene67462:CDS |
| ATTGACAAATGGAGTGTCAA+AGG | 0.544031 | 5.1:+13496548 | MS.gene67462:CDS |
| AGGTATCGATCCAAGCAAAT+GGG | 0.547486 | 5.1:+13498171 | MS.gene67462:intron |
| CCCAAGCTTGATGAGTTGAA+AGG | 0.549150 | 5.1:-13495346 | None:intergenic |
| AAGGGACTTGACCATGTTTG+AGG | 0.549611 | 5.1:-13495327 | None:intergenic |
| AATTAGATGCCAAAGATGGA+TGG | 0.551523 | 5.1:+13500532 | MS.gene67462:intron |
| GCCACCACCAAAGCTTAAGA+TGG | 0.552183 | 5.1:+13495763 | MS.gene67462:CDS |
| CCATAAAGACAGAGCTTCGT+CGG | 0.553378 | 5.1:+13499484 | MS.gene67462:CDS |
| GGAAAATTAGATGCCAAAGA+TGG | 0.561731 | 5.1:+13500528 | MS.gene67462:intron |
| AATCCAATTACTGCTGCCAT+AGG | 0.562131 | 5.1:-13496963 | None:intergenic |
| TAATGTTAGCCATCTTGATA+GGG | 0.562447 | 5.1:+13494274 | MS.gene67462:CDS |
| TCATGAACTAAGGACACCTA+TGG | 0.568676 | 5.1:+13496947 | MS.gene67462:CDS |
| TCATTGAGTAGTTTGGCGTA+TGG | 0.569196 | 5.1:+13494345 | MS.gene67462:CDS |
| GCACAATGGAAGCATCTGAA+TGG | 0.570506 | 5.1:+13499187 | MS.gene67462:CDS |
| ATGGAAGCATCTGAATGGAA+TGG | 0.570666 | 5.1:+13499192 | MS.gene67462:CDS |
| AAGAAAGTATATCATGGGAC+AGG | 0.570703 | 5.1:+13496440 | MS.gene67462:CDS |
| TGTTGTTCTGTGACATCCAT+TGG | 0.570801 | 5.1:-13498926 | None:intergenic |
| TGCAACACAAGCTTATGATA+GGG | 0.572109 | 5.1:+13499818 | MS.gene67462:CDS |
| CCAATATGTTGTTAAGAAGA+CGG | 0.575002 | 5.1:-13497073 | None:intergenic |
| AGATACACCAGTAATTCAAA+GGG | 0.575176 | 5.1:+13499908 | MS.gene67462:CDS |
| AAACAAACCTCATGTTTGCA+AGG | 0.575888 | 5.1:-13496653 | None:intergenic |
| GAAGATTTGATCAACATAGC+AGG | 0.577289 | 5.1:+13495470 | MS.gene67462:CDS |
| AAATTAGTTAGAGGTGACTC+TGG | 0.577940 | 5.1:+13497637 | MS.gene67462:CDS |
| AAGACAGAGCTTCGTCGGAA+AGG | 0.578351 | 5.1:+13499489 | MS.gene67462:CDS |
| ATCTCAAGCTGAGCAAGTTG+AGG | 0.579080 | 5.1:+13494494 | MS.gene67462:CDS |
| GTCATGTTATTCTGCGAGGA+TGG | 0.580292 | 5.1:+13497878 | MS.gene67462:CDS |
| AAAGTATATCATGGGACAGG+TGG | 0.583109 | 5.1:+13496443 | MS.gene67462:CDS |
| ACCAAAGCTTAAGATGGCTG+TGG | 0.586674 | 5.1:+13495769 | MS.gene67462:CDS |
| ATTAGTTCTCTGCAACCACT+CGG | 0.587084 | 5.1:-13495822 | None:intergenic |
| ATACCAAGAAAGTATATCAT+GGG | 0.587306 | 5.1:+13496435 | MS.gene67462:CDS |
| ATGTTGAGAATGCTAAGCTA+GGG | 0.588292 | 5.1:+13495879 | MS.gene67462:CDS |
| TCGGAAGAGCAAAATTTGTG+TGG | 0.588656 | 5.1:+13499436 | MS.gene67462:CDS |
| GGTCAATAGCCCTATCAAGA+TGG | 0.588935 | 5.1:-13494283 | None:intergenic |
| GAAGCCAAATGCCTTAAGGT+TGG | 0.589210 | 5.1:+13500649 | MS.gene67462:CDS |
| TTAGTCAACTTGAAGCAAGA+AGG | 0.589800 | 5.1:+13496595 | MS.gene67462:CDS |
| TCAACTTGAAGCAAGAAGGA+AGG | 0.590551 | 5.1:+13496599 | MS.gene67462:CDS |
| TGAAGCAAGAAGGAAGGCAG+AGG | 0.592213 | 5.1:+13496605 | MS.gene67462:CDS |
| AGAAGATGCAGAATTCGACT+TGG | 0.592480 | 5.1:+13497250 | MS.gene67462:CDS |
| ATGATAAGAAATCACTTGAA+GGG | 0.595276 | 5.1:+13499865 | MS.gene67462:CDS |
| GGTTGCATCAACCTCAAACA+TGG | 0.597197 | 5.1:+13495316 | MS.gene67462:CDS |
| TGGCAGGTTAATAAGATGGG+TGG | 0.597564 | 5.1:+13498836 | MS.gene67462:intron |
| GAAGATGATATAATAAGACT+TGG | 0.598140 | 5.1:+13495797 | MS.gene67462:CDS |
| AATTGAGAATCATACCAGAA+AGG | 0.600279 | 5.1:-13497346 | None:intergenic |
| AAGCAATGAGGGCAGTAACA+TGG | 0.603356 | 5.1:+13495159 | MS.gene67462:CDS |
| GAACCACTTGATCCTGTCAC+AGG | 0.609145 | 5.1:+13495413 | MS.gene67462:CDS |
| TGGTTTGAAGTTGAGGACAC+AGG | 0.609745 | 5.1:+13498042 | MS.gene67462:CDS |
| GCAGCTATATGAAGCAATGA+GGG | 0.611384 | 5.1:+13495148 | MS.gene67462:intron |
| TAGAAGAGAGTCTCTCCAGA+AGG | 0.615474 | 5.1:+13500034 | MS.gene67462:CDS |
| TTAGTCGAATTTGTAAGTAA+CGG | 0.616052 | 5.1:-13495740 | None:intergenic |
| CAAATGCCTTAAGGTTGGCA+TGG | 0.617547 | 5.1:+13500654 | MS.gene67462:CDS |
| TCGCCTGTGACAGGATCAAG+TGG | 0.620643 | 5.1:-13495416 | None:intergenic |
| GGTAAAGCTGCCGAAAGCAA+AGG | 0.621545 | 5.1:-13495557 | None:intergenic |
| AAAAGCAATAAGGAAATCAG+AGG | 0.621819 | 5.1:+13500567 | MS.gene67462:CDS |
| TTCATCACAAGACATTGCAT+GGG | 0.622262 | 5.1:-13500629 | None:intergenic |
| GCAATAAGGAAATCAGAGGA+AGG | 0.623445 | 5.1:+13500571 | MS.gene67462:CDS |
| GGCTATTGACCATATTAACA+TGG | 0.629966 | 5.1:+13494295 | MS.gene67462:CDS |
| AGCAGCTATATGAAGCAATG+AGG | 0.636477 | 5.1:+13495147 | MS.gene67462:intron |
| CAACATATTGGATCTGAGCA+AGG | 0.636910 | 5.1:+13497085 | MS.gene67462:CDS |
| TTTACTTATTTCAGGCATGG+AGG | 0.638874 | 5.1:+13498513 | MS.gene67462:intron |
| GAGTTAGTTGAGATGCATAG+TGG | 0.639051 | 5.1:+13495662 | MS.gene67462:CDS |
| ATTTGGAAGAAAATAATCCA+AGG | 0.640483 | 5.1:+13499745 | MS.gene67462:CDS |
| AGTTAGAGGTGACTCTGGCA+GGG | 0.641913 | 5.1:+13497642 | MS.gene67462:CDS |
| GAAGATGCAGAATTCGACTT+GGG | 0.643061 | 5.1:+13497251 | MS.gene67462:CDS |
| TAGAGGTGACTCTGGCAGGG+TGG | 0.646259 | 5.1:+13497645 | MS.gene67462:CDS |
| GGACTTTCACAAGTTCCGGA+TGG | 0.648808 | 5.1:+13495491 | MS.gene67462:CDS |
| GTTTGAGGTTGATGCAACCA+TGG | 0.651337 | 5.1:-13495312 | None:intergenic |
| GTAGAATAATAACATCGAAG+TGG | 0.676676 | 5.1:+13499145 | MS.gene67462:CDS |
| GCTGGTCATGTTATTCTGCG+AGG | 0.686581 | 5.1:+13497874 | MS.gene67462:intron |
| AAGAAAAGTAACTCACCAAG+AGG | 0.687749 | 5.1:+13494006 | MS.gene67462:CDS |
| AGGTGATGGACAACAAGCAG+TGG | 0.694466 | 5.1:+13499977 | MS.gene67462:CDS |
| AAGCTTATGATAGGGTGACA+AGG | 0.699339 | 5.1:+13499826 | MS.gene67462:CDS |
| ATGTATTTGACTTCTCAACA+AGG | 0.699506 | 5.1:+13495689 | MS.gene67462:CDS |
| TAATAAGACTTGGAGCCGAG+TGG | 0.708676 | 5.1:+13495807 | MS.gene67462:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTAATAAAAGATAAATA+TGG | + | chr5.1:13494210-13494229 | MS.gene67462:intron | 10.0% |
| !!! | ATTTTAAATATCTATGATAT+TGG | + | chr5.1:13494628-13494647 | MS.gene67462:intron | 10.0% |
| !!! | TGAATTTAATAAAATTTTAG+AGG | - | chr5.1:13494171-13494190 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTTGATAAGAT+TGG | + | chr5.1:13494699-13494718 | MS.gene67462:intron | 10.0% |
| !! | AACAATAATAATGAGATAAA+AGG | - | chr5.1:13498813-13498832 | None:intergenic | 15.0% |
| !! | ATAAAACAGAAATTAAATAG+AGG | - | chr5.1:13496382-13496401 | None:intergenic | 15.0% |
| !! | ATAAAAGATAAATATGGATT+TGG | + | chr5.1:13494216-13494235 | MS.gene67462:intron | 15.0% |
| !!! | AATAATATTTTGTTTTATGC+AGG | + | chr5.1:13494251-13494270 | MS.gene67462:intron | 15.0% |
| !!! | AATCAAATTATTTTCATACA+AGG | + | chr5.1:13500408-13500427 | MS.gene67462:intron | 15.0% |
| !!! | ACTTATTTTATTTTGACAAA+AGG | - | chr5.1:13498109-13498128 | None:intergenic | 15.0% |
| !!! | CTATTTTTAAAAATTGTTAC+TGG | + | chr5.1:13496779-13496798 | MS.gene67462:intron | 15.0% |
| !!! | TTCATGAAATGTAAATTTTA+AGG | - | chr5.1:13498080-13498099 | None:intergenic | 15.0% |
| !!! | TTCTTCTAATAAAAGTATTA+TGG | + | chr5.1:13495589-13495608 | MS.gene67462:CDS | 15.0% |
| !!! | TTTTATCTCATTATTATTGT+TGG | + | chr5.1:13498812-13498831 | MS.gene67462:intron | 15.0% |
| !! | AAAAAAATTCACATTTCCTT+TGG | + | chr5.1:13498675-13498694 | MS.gene67462:intron | 20.0% |
| !! | AACAATAATGCTTGAAAAAA+TGG | + | chr5.1:13499935-13499954 | MS.gene67462:CDS | 20.0% |
| !! | AAGAAAAAAAACAAACATTG+AGG | - | chr5.1:13498460-13498479 | None:intergenic | 20.0% |
| !! | AATGATAATTAAGTCAGTTA+TGG | + | chr5.1:13494585-13494604 | MS.gene67462:intron | 20.0% |
| !! | ACAATAATGCTTGAAAAAAT+GGG | + | chr5.1:13499936-13499955 | MS.gene67462:CDS | 20.0% |
| !! | ATAACAATCAATTACAAGAA+TGG | + | chr5.1:13495215-13495234 | MS.gene67462:CDS | 20.0% |
| !! | ATACATAACAAAAATTGGTT+AGG | - | chr5.1:13495110-13495129 | None:intergenic | 20.0% |
| !! | ATATAAAATTACACTTGTGT+TGG | + | chr5.1:13500275-13500294 | MS.gene67462:intron | 20.0% |
| !! | ATATCTAATAAGTGAATATC+AGG | + | chr5.1:13500474-13500493 | MS.gene67462:intron | 20.0% |
| !! | GATATAAAAAAGTTACCTAT+TGG | - | chr5.1:13500459-13500478 | None:intergenic | 20.0% |
| !! | TTAAATCCTTCAAGATTTAT+TGG | - | chr5.1:13499294-13499313 | None:intergenic | 20.0% |
| !! | TTCTGATCAAGATAAAAATT+CGG | - | chr5.1:13497934-13497953 | None:intergenic | 20.0% |
| !! | TTGAATTGAAATGAAATTCA+GGG | + | chr5.1:13495029-13495048 | MS.gene67462:intron | 20.0% |
| !! | TTTGGATAAATAGTTTAATC+AGG | + | chr5.1:13500227-13500246 | MS.gene67462:intron | 20.0% |
| !!! | AGATCATACAATTGAAATTT+TGG | + | chr5.1:13498341-13498360 | MS.gene67462:intron | 20.0% |
| !!! | AGCAAAAATGATTCATATTT+TGG | + | chr5.1:13499545-13499564 | MS.gene67462:CDS | 20.0% |
| !!! | ATTTTCTGAAGAAGAAAAAA+AGG | + | chr5.1:13498636-13498655 | MS.gene67462:intron | 20.0% |
| !!! | GTAAACTAGTTTTACAAAAT+TGG | + | chr5.1:13496208-13496227 | MS.gene67462:intron | 20.0% |
| !!! | TAGACTTTAATTTCAATGAA+AGG | + | chr5.1:13497538-13497557 | MS.gene67462:intron | 20.0% |
| !!! | TTGTTCAAAAATTAGCTTTA+TGG | + | chr5.1:13496896-13496915 | MS.gene67462:intron | 20.0% |
| !!! | TTTTACAAAATTGGATTATC+CGG | + | chr5.1:13496217-13496236 | MS.gene67462:intron | 20.0% |
| ! | AAACAAATGTGATTTATTCG+TGG | - | chr5.1:13498132-13498151 | None:intergenic | 25.0% |
| ! | AATGATAAGAAATCACTTGA+AGG | + | chr5.1:13499864-13499883 | MS.gene67462:CDS | 25.0% |
| ! | ACATGTTTAATAGACTATTC+AGG | + | chr5.1:13493968-13493987 | MS.gene67462:CDS | 25.0% |
| ! | ACTAAATTGACCAAATCAAA+AGG | - | chr5.1:13494674-13494693 | None:intergenic | 25.0% |
| ! | AGGACATACATAACAAAAAT+TGG | - | chr5.1:13495115-13495134 | None:intergenic | 25.0% |
| ! | ATAATATAGCACTATCTTAG+TGG | + | chr5.1:13494861-13494880 | MS.gene67462:intron | 25.0% |
| ! | ATCTCATTATTATTGTTGGA+TGG | + | chr5.1:13498816-13498835 | MS.gene67462:intron | 25.0% |
| ! | ATGATAAGAAATCACTTGAA+GGG | + | chr5.1:13499865-13499884 | MS.gene67462:CDS | 25.0% |
| ! | ATGTATATAGTCAATGATCT+CGG | + | chr5.1:13498308-13498327 | MS.gene67462:intron | 25.0% |
| ! | ATTTGGAAGAAAATAATCCA+AGG | + | chr5.1:13499745-13499764 | MS.gene67462:CDS | 25.0% |
| ! | CAAAAGAAAAACATGAAAGA+GGG | + | chr5.1:13499600-13499619 | MS.gene67462:CDS | 25.0% |
| ! | CAAAAGGACTAATGTAATTA+AGG | - | chr5.1:13494658-13494677 | None:intergenic | 25.0% |
| ! | CAAATATATGACTGATGTTT+CGG | - | chr5.1:13496112-13496131 | None:intergenic | 25.0% |
| ! | CATTATCCAATAAATCTTGA+AGG | + | chr5.1:13499285-13499304 | MS.gene67462:CDS | 25.0% |
| ! | CCTATATAGTGTAAAACATT+AGG | - | chr5.1:13497208-13497227 | None:intergenic | 25.0% |
| ! | CTAAAAGCAAGAGAAATTTA+AGG | + | chr5.1:13499056-13499075 | MS.gene67462:intron | 25.0% |
| ! | CTCTGAATATTTATTACCAA+AGG | - | chr5.1:13495953-13495972 | None:intergenic | 25.0% |
| ! | CTTCAGAAAATACACTAATA+AGG | - | chr5.1:13498627-13498646 | None:intergenic | 25.0% |
| ! | GAAAAAATCATTGAGTAGTT+TGG | + | chr5.1:13494338-13494357 | MS.gene67462:CDS | 25.0% |
| ! | GAAATTTAAGGATAACAAAC+AGG | + | chr5.1:13499068-13499087 | MS.gene67462:intron | 25.0% |
| ! | GAAGATGATATAATAAGACT+TGG | + | chr5.1:13495797-13495816 | MS.gene67462:CDS | 25.0% |
| ! | GTTGAATTGAAATGAAATTC+AGG | + | chr5.1:13495028-13495047 | MS.gene67462:intron | 25.0% |
| ! | TATGTTCTAGTATAGTTACT+TGG | + | chr5.1:13497731-13497750 | MS.gene67462:intron | 25.0% |
| ! | TCAACAACAATGACAAAAAT+TGG | - | chr5.1:13499351-13499370 | None:intergenic | 25.0% |
| ! | TCAATATGATTTGATCCTAA+TGG | + | chr5.1:13500097-13500116 | MS.gene67462:CDS | 25.0% |
| ! | TCTATAAATCATGAAGTTGT+GGG | + | chr5.1:13496343-13496362 | MS.gene67462:intron | 25.0% |
| ! | TCTGCATGAAAAATAGTTAT+TGG | - | chr5.1:13497607-13497626 | None:intergenic | 25.0% |
| ! | TTAAATGTAATCGTATGTGT+TGG | + | chr5.1:13497461-13497480 | MS.gene67462:intron | 25.0% |
| ! | TTAGGATCAAATCATATTGA+TGG | - | chr5.1:13500097-13500116 | None:intergenic | 25.0% |
| ! | TTAGTCGAATTTGTAAGTAA+CGG | - | chr5.1:13495743-13495762 | None:intergenic | 25.0% |
| ! | TTCTATAAATCATGAAGTTG+TGG | + | chr5.1:13496342-13496361 | MS.gene67462:intron | 25.0% |
| ! | TTTGTTTATTTCCTATGTTG+TGG | + | chr5.1:13498145-13498164 | MS.gene67462:intron | 25.0% |
| !! | AATGTTTTACACTATATAGG+TGG | + | chr5.1:13497208-13497227 | MS.gene67462:intron | 25.0% |
| !! | AGTATTTAACTTAGAGAACA+AGG | + | chr5.1:13496724-13496743 | MS.gene67462:intron | 25.0% |
| !! | ATACCAAGAAAGTATATCAT+GGG | + | chr5.1:13496435-13496454 | MS.gene67462:CDS | 25.0% |
| !! | CATCAAAGTTGTTATTGTTA+TGG | - | chr5.1:13499263-13499282 | None:intergenic | 25.0% |
| !! | CCTAATGTTTTACACTATAT+AGG | + | chr5.1:13497205-13497224 | MS.gene67462:intron | 25.0% |
| !! | GCTTAAGATAGAACATTTTT+AGG | + | chr5.1:13496005-13496024 | MS.gene67462:intron | 25.0% |
| !! | TCTTTATGCATTTTTGTCAT+TGG | + | chr5.1:13496507-13496526 | MS.gene67462:CDS | 25.0% |
| !! | TGTTATCTTTTAGATCTCTA+TGG | - | chr5.1:13495256-13495275 | None:intergenic | 25.0% |
| !! | TTCCAAATGTTCATTTTCAT+CGG | - | chr5.1:13499733-13499752 | None:intergenic | 25.0% |
| !!! | ATCATTTTTGCTTTGTATAG+AGG | - | chr5.1:13499537-13499556 | None:intergenic | 25.0% |
| !!! | CTTTATGGTTTGTTTTTTCT+TGG | + | chr5.1:13496911-13496930 | MS.gene67462:intron | 25.0% |
| !!! | TCATCGGTTAACTTTAAAAT+TGG | - | chr5.1:13499717-13499736 | None:intergenic | 25.0% |
| !!! | TGAAATTTTTCAATCATGCT+AGG | + | chr5.1:13495006-13495025 | MS.gene67462:intron | 25.0% |
| !!! | TGCATTTTGATATTGACAAA+TGG | + | chr5.1:13496537-13496556 | MS.gene67462:CDS | 25.0% |
| !!! | TTACATTAGTCCTTTTGATT+TGG | + | chr5.1:13494661-13494680 | MS.gene67462:intron | 25.0% |
| !!! | TTTTTTATTATGCGTGCAAT+TGG | - | chr5.1:13497163-13497182 | None:intergenic | 25.0% |
| AAAAGCAATAAGGAAATCAG+AGG | + | chr5.1:13500567-13500586 | MS.gene67462:CDS | 30.0% | |
| AACCGATGAAAATGAACATT+TGG | + | chr5.1:13499728-13499747 | MS.gene67462:CDS | 30.0% | |
| AACTTCCTTCACAAGTATTT+CGG | + | chr5.1:13499417-13499436 | MS.gene67462:CDS | 30.0% | |
| AAGATACACCAGTAATTCAA+AGG | + | chr5.1:13499907-13499926 | MS.gene67462:CDS | 30.0% | |
| AAGTCCTAATACTGTTATTC+TGG | - | chr5.1:13500138-13500157 | None:intergenic | 30.0% | |
| AATTGAGAATCATACCAGAA+AGG | - | chr5.1:13497349-13497368 | None:intergenic | 30.0% | |
| AGAAATCAAGGTTACCAAAA+AGG | + | chr5.1:13498859-13498878 | MS.gene67462:CDS | 30.0% | |
| AGATACACCAGTAATTCAAA+GGG | + | chr5.1:13499908-13499927 | MS.gene67462:CDS | 30.0% | |
| AGATCTTTCAAATTACTCCA+TGG | + | chr5.1:13495295-13495314 | MS.gene67462:CDS | 30.0% | |
| AGTGGATGCTCTTAATTATA+TGG | + | chr5.1:13499995-13500014 | MS.gene67462:CDS | 30.0% | |
| ATATTCCACATCCTCAAAAT+CGG | - | chr5.1:13494396-13494415 | None:intergenic | 30.0% | |
| CCAATATGTTGTTAAGAAGA+CGG | - | chr5.1:13497076-13497095 | None:intergenic | 30.0% | |
| CTATAAATCATGAAGTTGTG+GGG | + | chr5.1:13496344-13496363 | MS.gene67462:intron | 30.0% | |
| CTGAATCCTTTACTTATTTC+AGG | + | chr5.1:13498505-13498524 | MS.gene67462:intron | 30.0% | |
| CTTGTGAAATTGTTTGACAT+AGG | + | chr5.1:13500199-13500218 | MS.gene67462:intron | 30.0% | |
| GAGATAACAAAGTGATACTT+TGG | + | chr5.1:13498022-13498041 | MS.gene67462:CDS | 30.0% | |
| GATATGCCAAAATTAGTTAG+AGG | + | chr5.1:13497628-13497647 | MS.gene67462:CDS | 30.0% | |
| GCAAAAGAAAAACATGAAAG+AGG | + | chr5.1:13499599-13499618 | MS.gene67462:CDS | 30.0% | |
| GTAGAATAATAACATCGAAG+TGG | + | chr5.1:13499145-13499164 | MS.gene67462:CDS | 30.0% | |
| TAAATACTAAGTGTGAATGC+AGG | + | chr5.1:13499095-13499114 | MS.gene67462:intron | 30.0% | |
| TAACAGTGCATAAAGAATTG+CGG | - | chr5.1:13496136-13496155 | None:intergenic | 30.0% | |
| TAACCGAATTCGAACATTAT+AGG | - | chr5.1:13496870-13496889 | None:intergenic | 30.0% | |
| TAAGTCAGTTATGGCTAAAT+TGG | + | chr5.1:13494594-13494613 | MS.gene67462:intron | 30.0% | |
| TAATGCTTTATCTGTGTTTG+TGG | + | chr5.1:13500507-13500526 | MS.gene67462:intron | 30.0% | |
| TAATGTTAGCCATCTTGATA+GGG | + | chr5.1:13494274-13494293 | MS.gene67462:CDS | 30.0% | |
| TACTAAGCATCAAAGATATG+AGG | + | chr5.1:13499322-13499341 | MS.gene67462:CDS | 30.0% | |
| TATGCACTGTTAGTGTAAAT+TGG | + | chr5.1:13496144-13496163 | MS.gene67462:intron | 30.0% | |
| TATTGTAAATGCATTACAGC+TGG | + | chr5.1:13497856-13497875 | MS.gene67462:intron | 30.0% | |
| TATTTCCTATGTTGTGGTAT+AGG | + | chr5.1:13498151-13498170 | MS.gene67462:intron | 30.0% | |
| TCGAATGTAAACAAATGTGT+CGG | - | chr5.1:13496753-13496772 | None:intergenic | 30.0% | |
| TGAACCAGAATAACAGTATT+AGG | + | chr5.1:13500131-13500150 | MS.gene67462:intron | 30.0% | |
| TGAGAGATCTTTCAAAACTT+TGG | + | chr5.1:13496467-13496486 | MS.gene67462:CDS | 30.0% | |
| TGTCCTATAATGTTCGAATT+CGG | + | chr5.1:13496864-13496883 | MS.gene67462:intron | 30.0% | |
| TGTGAAATGCCATGTTAATA+TGG | - | chr5.1:13494307-13494326 | None:intergenic | 30.0% | |
| TGTTCAAATTATAACCGCTA+TGG | - | chr5.1:13497431-13497450 | None:intergenic | 30.0% | |
| TTATGACTTAAACTTTGTGC+AGG | + | chr5.1:13496398-13496417 | MS.gene67462:intron | 30.0% | |
| TTATTAGAAGAATCCCAAAC+AGG | - | chr5.1:13495581-13495600 | None:intergenic | 30.0% | |
| TTCTGGTATGATTCTCAATT+TGG | + | chr5.1:13497349-13497368 | MS.gene67462:intron | 30.0% | |
| TTGACTTAAGCACAGATATA+TGG | + | chr5.1:13499382-13499401 | MS.gene67462:CDS | 30.0% | |
| ! | ACAACTGCATTTTATAGTGT+TGG | + | chr5.1:13495626-13495645 | MS.gene67462:CDS | 30.0% |
| ! | ATGGTAACTTTTCAGCAATT+TGG | + | chr5.1:13495384-13495403 | MS.gene67462:CDS | 30.0% |
| ! | ATGTATTTGACTTCTCAACA+AGG | + | chr5.1:13495689-13495708 | MS.gene67462:CDS | 30.0% |
| ! | CATACCAAGAAAGTATATCA+TGG | + | chr5.1:13496434-13496453 | MS.gene67462:CDS | 30.0% |
| ! | GCTTTAAATTTGACAGACAA+TGG | + | chr5.1:13498953-13498972 | MS.gene67462:CDS | 30.0% |
| ! | TATTCAGGTTTACCAATTCA+TGG | + | chr5.1:13493983-13494002 | MS.gene67462:CDS | 30.0% |
| ! | TGGACTAACACAAATTTTGA+GGG | + | chr5.1:13499212-13499231 | MS.gene67462:CDS | 30.0% |
| ! | TGTTGCAAAGTTTGTTTCTT+TGG | - | chr5.1:13499805-13499824 | None:intergenic | 30.0% |
| ! | TTACTTGGTAGTTACAATAG+TGG | + | chr5.1:13497746-13497765 | MS.gene67462:intron | 30.0% |
| ! | TTATCAAGTATTGCTCCAAT+AGG | + | chr5.1:13500441-13500460 | MS.gene67462:intron | 30.0% |
| ! | TTTGTCATTGTTGTTGACAT+TGG | + | chr5.1:13499354-13499373 | MS.gene67462:CDS | 30.0% |
| ! | TTTTAGACCTAGTTTACCAA+AGG | - | chr5.1:13498694-13498713 | None:intergenic | 30.0% |
| ! | TTTTCCTAATTCAACTCATG+AGG | + | chr5.1:13495853-13495872 | MS.gene67462:CDS | 30.0% |
| !! | AAAAGTATTATGGCTGTTGT+TGG | + | chr5.1:13495599-13495618 | MS.gene67462:CDS | 30.0% |
| !! | ATCTTGTATTTTTGTCCTTC+TGG | - | chr5.1:13500052-13500071 | None:intergenic | 30.0% |
| !! | ATGGACTAACACAAATTTTG+AGG | + | chr5.1:13499211-13499230 | MS.gene67462:CDS | 30.0% |
| !! | ATTTGTCTCTGAAATAGTAG+AGG | - | chr5.1:13494830-13494849 | None:intergenic | 30.0% |
| !!! | GTTACTTTTCTTCCATGAAT+TGG | - | chr5.1:13493998-13494017 | None:intergenic | 30.0% |
| !!! | TGATTGTGTGATTGTTTTTG+AGG | + | chr5.1:13498766-13498785 | MS.gene67462:intron | 30.0% |
| AAACAAACCTCATGTTTGCA+AGG | - | chr5.1:13496656-13496675 | None:intergenic | 35.0% | |
| AAACTTGAAGAGACTTCCTT+TGG | + | chr5.1:13495934-13495953 | MS.gene67462:CDS | 35.0% | |
| AAATTAGTTAGAGGTGACTC+TGG | + | chr5.1:13497637-13497656 | MS.gene67462:CDS | 35.0% | |
| AACCACAAAAACACTGTAGT+AGG | - | chr5.1:13494100-13494119 | None:intergenic | 35.0% | |
| AAGAAAAGTAACTCACCAAG+AGG | + | chr5.1:13494006-13494025 | MS.gene67462:CDS | 35.0% | |
| AATCAAGGTTACCAAAAAGG+AGG | + | chr5.1:13498862-13498881 | MS.gene67462:CDS | 35.0% | |
| AATGTAAACAAATGTGTCGG+TGG | - | chr5.1:13496750-13496769 | None:intergenic | 35.0% | |
| AATGTACCTTCATTGAACTC+TGG | + | chr5.1:13496291-13496310 | MS.gene67462:intron | 35.0% | |
| AATTAGATGCCAAAGATGGA+TGG | + | chr5.1:13500532-13500551 | MS.gene67462:intron | 35.0% | |
| ACCATAAGCTTGAAGTCAAT+TGG | - | chr5.1:13500697-13500716 | None:intergenic | 35.0% | |
| ACGCATTTGAGCTTATTTAC+TGG | + | chr5.1:13500168-13500187 | MS.gene67462:intron | 35.0% | |
| AGAAATCACTTGAAGGGTTA+AGG | + | chr5.1:13499871-13499890 | MS.gene67462:CDS | 35.0% | |
| ATATGACTGATGTTTCGGTA+AGG | - | chr5.1:13496107-13496126 | None:intergenic | 35.0% | |
| ATCAAGGTTACCAAAAAGGA+GGG | + | chr5.1:13498863-13498882 | MS.gene67462:CDS | 35.0% | |
| ATCACAATTCATCATGTTGC+CGG | - | chr5.1:13496239-13496258 | None:intergenic | 35.0% | |
| ATGAGGCAACAAAAGCAATA+AGG | + | chr5.1:13500557-13500576 | MS.gene67462:CDS | 35.0% | |
| ATGTTGAGAATGCTAAGCTA+GGG | + | chr5.1:13495879-13495898 | MS.gene67462:CDS | 35.0% | |
| ATTTCTACAGTCATTGCAGT+CGG | - | chr5.1:13498430-13498449 | None:intergenic | 35.0% | |
| CACATTTCCTTTGGTAAACT+AGG | + | chr5.1:13498684-13498703 | MS.gene67462:intron | 35.0% | |
| CATTATTATTGTTGGATGGC+AGG | + | chr5.1:13498820-13498839 | MS.gene67462:intron | 35.0% | |
| CCGTCTTCTTAACAACATAT+TGG | + | chr5.1:13497073-13497092 | MS.gene67462:CDS | 35.0% | |
| CGAAGTGGTTAACCAAAAAA+GGG | + | chr5.1:13499160-13499179 | MS.gene67462:CDS | 35.0% | |
| GAACAAGATTCTTCTTTCCT+TGG | - | chr5.1:13499765-13499784 | None:intergenic | 35.0% | |
| GAACATTATAGGACATGACA+CGG | - | chr5.1:13496859-13496878 | None:intergenic | 35.0% | |
| GAAGATTTGATCAACATAGC+AGG | + | chr5.1:13495470-13495489 | MS.gene67462:CDS | 35.0% | |
| GAAGTGGTTAACCAAAAAAG+GGG | + | chr5.1:13499161-13499180 | MS.gene67462:CDS | 35.0% | |
| GCAACATGATGAATTGTGAT+TGG | + | chr5.1:13496239-13496258 | MS.gene67462:intron | 35.0% | |
| GCGGATCTTATATAAAATCC+TGG | - | chr5.1:13496037-13496056 | None:intergenic | 35.0% | |
| GCTATGTTGATCAAATCTTC+TGG | - | chr5.1:13495470-13495489 | None:intergenic | 35.0% | |
| GGAAAATTAGATGCCAAAGA+TGG | + | chr5.1:13500528-13500547 | MS.gene67462:intron | 35.0% | |
| GGCTATTGACCATATTAACA+TGG | + | chr5.1:13494295-13494314 | MS.gene67462:CDS | 35.0% | |
| GTAATGTTAGCCATCTTGAT+AGG | + | chr5.1:13494273-13494292 | MS.gene67462:CDS | 35.0% | |
| TAGCTGCTACAAATAAAAGC+AGG | - | chr5.1:13495135-13495154 | None:intergenic | 35.0% | |
| TCCATGCCTGAAATAAGTAA+AGG | - | chr5.1:13498514-13498533 | None:intergenic | 35.0% | |
| TCCTTTACTTATTTCAGGCA+TGG | + | chr5.1:13498510-13498529 | MS.gene67462:intron | 35.0% | |
| TCGAAGTGGTTAACCAAAAA+AGG | + | chr5.1:13499159-13499178 | MS.gene67462:CDS | 35.0% | |
| TGCAACACAAGCTTATGATA+GGG | + | chr5.1:13499818-13499837 | MS.gene67462:CDS | 35.0% | |
| TGGAAAATTCTTCTACCTCT+TGG | - | chr5.1:13494024-13494043 | None:intergenic | 35.0% | |
| TGGGATGACAAAACAATTCA+TGG | + | chr5.1:13495365-13495384 | MS.gene67462:CDS | 35.0% | |
| TGTATGACAGTCATGAACTA+AGG | + | chr5.1:13496937-13496956 | MS.gene67462:intron | 35.0% | |
| TGTCCCATGATATACTTTCT+TGG | - | chr5.1:13496441-13496460 | None:intergenic | 35.0% | |
| TGTGGTTAGATTAGCAATCA+TGG | + | chr5.1:13494113-13494132 | MS.gene67462:CDS | 35.0% | |
| TGTTTGACATAGGTCATGTT+TGG | + | chr5.1:13500209-13500228 | MS.gene67462:intron | 35.0% | |
| TTACTTATTTCAGGCATGGA+GGG | + | chr5.1:13498514-13498533 | MS.gene67462:intron | 35.0% | |
| TTAGTCAACTTGAAGCAAGA+AGG | + | chr5.1:13496595-13496614 | MS.gene67462:CDS | 35.0% | |
| TTCATACCTGACAATCCATT+AGG | - | chr5.1:13500115-13500134 | None:intergenic | 35.0% | |
| TTCATCACAAGACATTGCAT+GGG | - | chr5.1:13500632-13500651 | None:intergenic | 35.0% | |
| TTGCAACACAAGCTTATGAT+AGG | + | chr5.1:13499817-13499836 | MS.gene67462:CDS | 35.0% | |
| TTTACTTATTTCAGGCATGG+AGG | + | chr5.1:13498513-13498532 | MS.gene67462:intron | 35.0% | |
| TTTGCTTCTTAGTGTACCAA+TGG | + | chr5.1:13498910-13498929 | MS.gene67462:CDS | 35.0% | |
| ! | AAAATTACACTTGTGTTGGC+CGG | + | chr5.1:13500279-13500298 | MS.gene67462:intron | 35.0% |
| ! | AAGAAAGTATATCATGGGAC+AGG | + | chr5.1:13496440-13496459 | MS.gene67462:CDS | 35.0% |
| ! | AAGGAAGTCTCTTCAAGTTT+AGG | - | chr5.1:13495934-13495953 | None:intergenic | 35.0% |
| ! | ATTGACAAATGGAGTGTCAA+AGG | + | chr5.1:13496548-13496567 | MS.gene67462:CDS | 35.0% |
| ! | GAGTCACCTCTAACTAATTT+TGG | - | chr5.1:13497637-13497656 | None:intergenic | 35.0% |
| ! | GTTCAATGAAGGTACATTGT+CGG | - | chr5.1:13496289-13496308 | None:intergenic | 35.0% |
| ! | TCTCTTCAAGTTTAGGTAGA+AGG | - | chr5.1:13495927-13495946 | None:intergenic | 35.0% |
| ! | TGAACCTCATGAGTTGAATT+AGG | - | chr5.1:13495860-13495879 | None:intergenic | 35.0% |
| !! | ATCCTACTACAGTGTTTTTG+TGG | + | chr5.1:13494095-13494114 | MS.gene67462:CDS | 35.0% |
| !! | GATACTTTGGTTTGAAGTTG+AGG | + | chr5.1:13498035-13498054 | MS.gene67462:CDS | 35.0% |
| !! | TTCTGAAATTACAACAGCTC+AGG | + | chr5.1:13494428-13494447 | MS.gene67462:CDS | 35.0% |
| !! | TTTGATCCTAATGGATTGTC+AGG | + | chr5.1:13500106-13500125 | MS.gene67462:CDS | 35.0% |
| !!! | AACATTTTTAGGTGATCACC+AGG | + | chr5.1:13496016-13496035 | MS.gene67462:intron | 35.0% |
| !!! | CTTCTTTTTCAACATCTCTG+TGG | - | chr5.1:13494044-13494063 | None:intergenic | 35.0% |
| AAAGTATATCATGGGACAGG+TGG | + | chr5.1:13496443-13496462 | MS.gene67462:CDS | 40.0% | |
| AACACAGAATCCCATTTGCT+TGG | - | chr5.1:13498184-13498203 | None:intergenic | 40.0% | |
| AAGCTTATGATAGGGTGACA+AGG | + | chr5.1:13499826-13499845 | MS.gene67462:CDS | 40.0% | |
| AATCCAATTACTGCTGCCAT+AGG | - | chr5.1:13496966-13496985 | None:intergenic | 40.0% | |
| AGAAGATGCAGAATTCGACT+TGG | + | chr5.1:13497250-13497269 | MS.gene67462:CDS | 40.0% | |
| AGCAGCTATATGAAGCAATG+AGG | + | chr5.1:13495147-13495166 | MS.gene67462:intron | 40.0% | |
| AGTGGTTGCAGAGAACTAAT+GGG | + | chr5.1:13495825-13495844 | MS.gene67462:CDS | 40.0% | |
| CAACACTGAAATGTCCATAG+CGG | + | chr5.1:13497414-13497433 | MS.gene67462:intron | 40.0% | |
| CAACATATTGGATCTGAGCA+AGG | + | chr5.1:13497085-13497104 | MS.gene67462:CDS | 40.0% | |
| CATGTTGAGAATGCTAAGCT+AGG | + | chr5.1:13495878-13495897 | MS.gene67462:CDS | 40.0% | |
| CCTTTCAACTCATCAAGCTT+GGG | + | chr5.1:13495346-13495365 | MS.gene67462:CDS | 40.0% | |
| CGATACCTATACCACAACAT+AGG | - | chr5.1:13498159-13498178 | None:intergenic | 40.0% | |
| CTAAACTAGCCCACTGAAAT+AGG | - | chr5.1:13500371-13500390 | None:intergenic | 40.0% | |
| CTCTTCCGAAATACTTGTGA+AGG | - | chr5.1:13499425-13499444 | None:intergenic | 40.0% | |
| CTTCATCACAAGACATTGCA+TGG | - | chr5.1:13500633-13500652 | None:intergenic | 40.0% | |
| CTTGAAGTGTGCTTCTCTAA+AGG | + | chr5.1:13500321-13500340 | MS.gene67462:intron | 40.0% | |
| CTTGCACTACAAGGCAATAT+GGG | + | chr5.1:13499123-13499142 | MS.gene67462:CDS | 40.0% | |
| GAAGATGCAGAATTCGACTT+GGG | + | chr5.1:13497251-13497270 | MS.gene67462:CDS | 40.0% | |
| GACAGTGACTACTAGCATAT+TGG | - | chr5.1:13494071-13494090 | None:intergenic | 40.0% | |
| GACTTAAACTTTGTGCAGGT+AGG | + | chr5.1:13496402-13496421 | MS.gene67462:intron | 40.0% | |
| GAGTTAGTTGAGATGCATAG+TGG | + | chr5.1:13495662-13495681 | MS.gene67462:CDS | 40.0% | |
| GATTATGGCTGCAATGATGA+AGG | + | chr5.1:13496063-13496082 | MS.gene67462:intron | 40.0% | |
| GCAATAAGGAAATCAGAGGA+AGG | + | chr5.1:13500571-13500590 | MS.gene67462:CDS | 40.0% | |
| GCAGCTATATGAAGCAATGA+GGG | + | chr5.1:13495148-13495167 | MS.gene67462:intron | 40.0% | |
| GCTTACAGTCTAGTAGTTGA+TGG | - | chr5.1:13498229-13498248 | None:intergenic | 40.0% | |
| GGATGGCAGGTTAATAAGAT+GGG | + | chr5.1:13498833-13498852 | MS.gene67462:intron | 40.0% | |
| GTCAATTCCTTGCAAACATG+AGG | + | chr5.1:13496646-13496665 | MS.gene67462:CDS | 40.0% | |
| GTTGATCCTACAGTCCAAAT+CGG | + | chr5.1:13498735-13498754 | MS.gene67462:intron | 40.0% | |
| GTTGCAACCCTTTGAATTAC+TGG | - | chr5.1:13499918-13499937 | None:intergenic | 40.0% | |
| TAAGATGGGTGGAGAAATCA+AGG | + | chr5.1:13498847-13498866 | MS.gene67462:CDS | 40.0% | |
| TACACTATATAGGTGGAGTC+TGG | + | chr5.1:13497215-13497234 | MS.gene67462:intron | 40.0% | |
| TACAGATTCGCCTTTGCTTT+CGG | + | chr5.1:13495547-13495566 | MS.gene67462:CDS | 40.0% | |
| TATTGGATCTGAGCAAGGTA+TGG | + | chr5.1:13497090-13497109 | MS.gene67462:intron | 40.0% | |
| TCAACTTGAAGCAAGAAGGA+AGG | + | chr5.1:13496599-13496618 | MS.gene67462:CDS | 40.0% | |
| TCATCACCAGAGTTCAATGA+AGG | - | chr5.1:13496300-13496319 | None:intergenic | 40.0% | |
| TCATGAACTAAGGACACCTA+TGG | + | chr5.1:13496947-13496966 | MS.gene67462:CDS | 40.0% | |
| TCATTGAGTAGTTTGGCGTA+TGG | + | chr5.1:13494345-13494364 | MS.gene67462:CDS | 40.0% | |
| TCGGAAAGGACACTTACTAA+TGG | + | chr5.1:13499503-13499522 | MS.gene67462:CDS | 40.0% | |
| TCGGAAGAGCAAAATTTGTG+TGG | + | chr5.1:13499436-13499455 | MS.gene67462:CDS | 40.0% | |
| TCTCAGTGTCAGTACTTCAT+AGG | - | chr5.1:13497381-13497400 | None:intergenic | 40.0% | |
| TCTTTGCATCGTTAGGAACT+TGG | + | chr5.1:13498548-13498567 | MS.gene67462:CDS | 40.0% | |
| TGATGAAGCCAAATGCCTTA+AGG | + | chr5.1:13500645-13500664 | MS.gene67462:CDS | 40.0% | |
| TGGATGGCAGGTTAATAAGA+TGG | + | chr5.1:13498832-13498851 | MS.gene67462:intron | 40.0% | |
| TGGTTTAGTGAGTGAGAGAA+TGG | - | chr5.1:13500725-13500744 | None:intergenic | 40.0% | |
| TGTTGTTCTGTGACATCCAT+TGG | - | chr5.1:13498929-13498948 | None:intergenic | 40.0% | |
| TTGATCCTACAGTCCAAATC+GGG | + | chr5.1:13498736-13498755 | MS.gene67462:intron | 40.0% | |
| TTGGACTGTAGGATCAACAT+CGG | - | chr5.1:13498733-13498752 | None:intergenic | 40.0% | |
| TTTGACAGACAATGGCTTAG+TGG | + | chr5.1:13498961-13498980 | MS.gene67462:CDS | 40.0% | |
| ! | ATTAGTTCTCTGCAACCACT+CGG | - | chr5.1:13495825-13495844 | None:intergenic | 40.0% |
| ! | CCAAGCTTGATGAGTTGAAA+GGG | - | chr5.1:13495348-13495367 | None:intergenic | 40.0% |
| ! | CTCTTTGCATGACTTGCATT+TGG | - | chr5.1:13497991-13498010 | None:intergenic | 40.0% |
| ! | CTTTAGAGAAGCACACTTCA+AGG | - | chr5.1:13500323-13500342 | None:intergenic | 40.0% |
| ! | GCCAATTGACTTCAAGCTTA+TGG | + | chr5.1:13500693-13500712 | MS.gene67462:CDS | 40.0% |
| !! | AGGTATCGATCCAAGCAAAT+GGG | + | chr5.1:13498171-13498190 | MS.gene67462:intron | 40.0% |
| !! | ATGAAGTACTGACACTGAGA+CGG | + | chr5.1:13497381-13497400 | MS.gene67462:intron | 40.0% |
| !! | ATGGAAGCATCTGAATGGAA+TGG | + | chr5.1:13499192-13499211 | MS.gene67462:CDS | 40.0% |
| !! | GAGACTGTTTTAGACCTTTC+TGG | + | chr5.1:13497332-13497351 | MS.gene67462:CDS | 40.0% |
| !! | TAGGTATCGATCCAAGCAAA+TGG | + | chr5.1:13498170-13498189 | MS.gene67462:intron | 40.0% |
| !! | TTTGGCTTTGTTGTCTTCAG+AGG | - | chr5.1:13499787-13499806 | None:intergenic | 40.0% |
| AAGATCCGCAACTGCGATTA+TGG | + | chr5.1:13496048-13496067 | MS.gene67462:intron | 45.0% | |
| AAGCAATGAGGGCAGTAACA+TGG | + | chr5.1:13495159-13495178 | MS.gene67462:CDS | 45.0% | |
| AAGCATCCATGCCAACCTTA+AGG | - | chr5.1:13500663-13500682 | None:intergenic | 45.0% | |
| AAGGGACTTGACCATGTTTG+AGG | - | chr5.1:13495330-13495349 | None:intergenic | 45.0% | |
| ACACCTATGGCAGCAGTAAT+TGG | + | chr5.1:13496960-13496979 | MS.gene67462:CDS | 45.0% | |
| ACCAAAGCTTAAGATGGCTG+TGG | + | chr5.1:13495769-13495788 | MS.gene67462:CDS | 45.0% | |
| ACTCCTTCAATCTGTCGTGT+CGG | + | chr5.1:13497496-13497515 | MS.gene67462:intron | 45.0% | |
| AGCAGGACTTTCACAAGTTC+CGG | + | chr5.1:13495487-13495506 | MS.gene67462:CDS | 45.0% | |
| AGGAAATCAGAGGAAGGAAC+AGG | + | chr5.1:13500577-13500596 | MS.gene67462:CDS | 45.0% | |
| AGTCGGCTGATCTAAATCGT+TGG | - | chr5.1:13498413-13498432 | None:intergenic | 45.0% | |
| ATCTCAAGCTGAGCAAGTTG+AGG | + | chr5.1:13494494-13494513 | MS.gene67462:CDS | 45.0% | |
| CAAATGCCTTAAGGTTGGCA+TGG | + | chr5.1:13500654-13500673 | MS.gene67462:CDS | 45.0% | |
| CAATCACACATTCCCCGATT+TGG | - | chr5.1:13498752-13498771 | None:intergenic | 45.0% | |
| CCATAAAGACAGAGCTTCGT+CGG | + | chr5.1:13499484-13499503 | MS.gene67462:CDS | 45.0% | |
| CCCTTTCAACTCATCAAGCT+TGG | + | chr5.1:13495345-13495364 | MS.gene67462:CDS | 45.0% | |
| CCTGTCACAGGCGAAAAAAT+CGG | + | chr5.1:13495425-13495444 | MS.gene67462:CDS | 45.0% | |
| CTGATGTTTCGGTAAGGTCA+TGG | - | chr5.1:13496101-13496120 | None:intergenic | 45.0% | |
| GAAGCCAAATGCCTTAAGGT+TGG | + | chr5.1:13500649-13500668 | MS.gene67462:CDS | 45.0% | |
| GAGTGGTTGCAGAGAACTAA+TGG | + | chr5.1:13495824-13495843 | MS.gene67462:CDS | 45.0% | |
| GCCAAAGATGGATGGATATG+AGG | + | chr5.1:13500540-13500559 | MS.gene67462:CDS | 45.0% | |
| GCCTCATATCCATCCATCTT+TGG | - | chr5.1:13500544-13500563 | None:intergenic | 45.0% | |
| GCTTGCACTACAAGGCAATA+TGG | + | chr5.1:13499122-13499141 | MS.gene67462:CDS | 45.0% | |
| GGACTATCGTTGCAAGAGTT+TGG | - | chr5.1:13497913-13497932 | None:intergenic | 45.0% | |
| GGTCAATAGCCCTATCAAGA+TGG | - | chr5.1:13494286-13494305 | None:intergenic | 45.0% | |
| GGTTGCATCAACCTCAAACA+TGG | + | chr5.1:13495316-13495335 | MS.gene67462:CDS | 45.0% | |
| GTCATGTTATTCTGCGAGGA+TGG | + | chr5.1:13497878-13497897 | MS.gene67462:CDS | 45.0% | |
| GTCTAGGTCTTTGCATCGTT+AGG | + | chr5.1:13498541-13498560 | MS.gene67462:CDS | 45.0% | |
| GTTACCAAAAAGGAGGGTCA+AGG | + | chr5.1:13498869-13498888 | MS.gene67462:CDS | 45.0% | |
| TAATAAGACTTGGAGCCGAG+TGG | + | chr5.1:13495807-13495826 | MS.gene67462:CDS | 45.0% | |
| TAGAAGAGAGTCTCTCCAGA+AGG | + | chr5.1:13500034-13500053 | MS.gene67462:CDS | 45.0% | |
| TCCACAGCCATCTTAAGCTT+TGG | - | chr5.1:13495773-13495792 | None:intergenic | 45.0% | |
| TGATCCTACAGTCCAAATCG+GGG | + | chr5.1:13498737-13498756 | MS.gene67462:intron | 45.0% | |
| TGGACTGTAGGATCAACATC+GGG | - | chr5.1:13498732-13498751 | None:intergenic | 45.0% | |
| TGGCAGGTTAATAAGATGGG+TGG | + | chr5.1:13498836-13498855 | MS.gene67462:intron | 45.0% | |
| TGGGCTGTTAGAGCAACAAT+TGG | - | chr5.1:13500613-13500632 | None:intergenic | 45.0% | |
| TTCGGCAGCTTTACCTGTTT+GGG | + | chr5.1:13495565-13495584 | MS.gene67462:CDS | 45.0% | |
| TTTCGGCAGCTTTACCTGTT+TGG | + | chr5.1:13495564-13495583 | MS.gene67462:CDS | 45.0% | |
| ! | ACAGCCATCTTAAGCTTTGG+TGG | - | chr5.1:13495770-13495789 | None:intergenic | 45.0% |
| ! | CAAAAAAGGGGTGTGCACAA+TGG | + | chr5.1:13499173-13499192 | MS.gene67462:CDS | 45.0% |
| ! | CAGGTATTGCTTGCACTACA+AGG | + | chr5.1:13499114-13499133 | MS.gene67462:intron | 45.0% |
| ! | CATGCCAACCTTAAGGCATT+TGG | - | chr5.1:13500656-13500675 | None:intergenic | 45.0% |
| ! | CCCAAGCTTGATGAGTTGAA+AGG | - | chr5.1:13495349-13495368 | None:intergenic | 45.0% |
| ! | GTTGTTGTTGCTGTAGGTGA+TGG | + | chr5.1:13499963-13499982 | MS.gene67462:CDS | 45.0% |
| ! | TGGTTTGAAGTTGAGGACAC+AGG | + | chr5.1:13498042-13498061 | MS.gene67462:CDS | 45.0% |
| ! | TGTGCTTCTCTAAAGGTCTC+AGG | + | chr5.1:13500328-13500347 | MS.gene67462:intron | 45.0% |
| ! | TGTTCCTTGACCCTCCTTTT+TGG | - | chr5.1:13498876-13498895 | None:intergenic | 45.0% |
| ! | TTCTGCAACGTCCGATTTTG+AGG | + | chr5.1:13494382-13494401 | MS.gene67462:CDS | 45.0% |
| !! | AACGTCCGATTTTGAGGATG+TGG | + | chr5.1:13494388-13494407 | MS.gene67462:CDS | 45.0% |
| !! | GCACAATGGAAGCATCTGAA+TGG | + | chr5.1:13499187-13499206 | MS.gene67462:CDS | 45.0% |
| !! | GTTTGAGGTTGATGCAACCA+TGG | - | chr5.1:13495315-13495334 | None:intergenic | 45.0% |
| !! | TCGTATGTGTTGGTGTTGTC+TGG | + | chr5.1:13497471-13497490 | MS.gene67462:intron | 45.0% |
| !!! | CATTGTGCACACCCCTTTTT+TGG | - | chr5.1:13499175-13499194 | None:intergenic | 45.0% |
| AAGACAGAGCTTCGTCGGAA+AGG | + | chr5.1:13499489-13499508 | MS.gene67462:CDS | 50.0% | |
| ACTGTAGGATCAACATCGGG+CGG | - | chr5.1:13498729-13498748 | None:intergenic | 50.0% | |
| ACTTGCTCAGCTTGAGATGC+AGG | - | chr5.1:13494492-13494511 | None:intergenic | 50.0% | |
| ACTTGGGACGCGAACTTGAA+GGG | + | chr5.1:13497267-13497286 | MS.gene67462:CDS | 50.0% | |
| AGTTAGAGGTGACTCTGGCA+GGG | + | chr5.1:13497642-13497661 | MS.gene67462:CDS | 50.0% | |
| CCGACGAAGCTCTGTCTTTA+TGG | - | chr5.1:13499487-13499506 | None:intergenic | 50.0% | |
| GAACCACTTGATCCTGTCAC+AGG | + | chr5.1:13495413-13495432 | MS.gene67462:CDS | 50.0% | |
| GCCACCACCAAAGCTTAAGA+TGG | + | chr5.1:13495763-13495782 | MS.gene67462:CDS | 50.0% | |
| GCTGGTCATGTTATTCTGCG+AGG | + | chr5.1:13497874-13497893 | MS.gene67462:intron | 50.0% | |
| GGACTTTCACAAGTTCCGGA+TGG | + | chr5.1:13495491-13495510 | MS.gene67462:CDS | 50.0% | |
| GGTAAAGCTGCCGAAAGCAA+AGG | - | chr5.1:13495560-13495579 | None:intergenic | 50.0% | |
| TAGCCCACTGAAATAGGCAC+CGG | - | chr5.1:13500365-13500384 | None:intergenic | 50.0% | |
| TAGTTAGAGGTGACTCTGGC+AGG | + | chr5.1:13497641-13497660 | MS.gene67462:CDS | 50.0% | |
| TATTTCAGGCATGGAGGGAC+TGG | + | chr5.1:13498519-13498538 | MS.gene67462:intron | 50.0% | |
| TGAAGCAAGAAGGAAGGCAG+AGG | + | chr5.1:13496605-13496624 | MS.gene67462:CDS | 50.0% | |
| TGCAGCCATAATCGCAGTTG+CGG | - | chr5.1:13496056-13496075 | None:intergenic | 50.0% | |
| TGCCATGTAGCTACACCATC+CGG | - | chr5.1:13495509-13495528 | None:intergenic | 50.0% | |
| TTCCGGATGGTGTAGCTACA+TGG | + | chr5.1:13495504-13495523 | MS.gene67462:CDS | 50.0% | |
| ! | ATTACACTTGTGTTGGCCGG+TGG | + | chr5.1:13500282-13500301 | MS.gene67462:intron | 50.0% |
| ! | GCCATCTTAAGCTTTGGTGG+TGG | - | chr5.1:13495767-13495786 | None:intergenic | 50.0% |
| ! | GGAGCTGTTGTTGTTGCTGT+AGG | + | chr5.1:13499957-13499976 | MS.gene67462:CDS | 50.0% |
| !! | AGGTGATGGACAACAAGCAG+TGG | + | chr5.1:13499977-13499996 | MS.gene67462:CDS | 50.0% |
| !! | CATTCCCCGATTTGGACTGT+AGG | - | chr5.1:13498744-13498763 | None:intergenic | 50.0% |
| !!! | CCGATTTTTTCGCCTGTGAC+AGG | - | chr5.1:13495428-13495447 | None:intergenic | 50.0% |
| AGCCCACTGAAATAGGCACC+GGG | - | chr5.1:13500364-13500383 | None:intergenic | 55.0% | |
| GAAGTTGAGGACACAGGCTG+TGG | + | chr5.1:13498048-13498067 | MS.gene67462:CDS | 55.0% | |
| GACTTGGGACGCGAACTTGA+AGG | + | chr5.1:13497266-13497285 | MS.gene67462:CDS | 55.0% | |
| GTCTCAGGCTCAATTCTCCC+CGG | + | chr5.1:13500343-13500362 | MS.gene67462:intron | 55.0% | |
| GTCTCTCAAGCCAACACCAC+CGG | - | chr5.1:13500301-13500320 | None:intergenic | 55.0% | |
| TCCCCGGTGCCTATTTCAGT+GGG | + | chr5.1:13500359-13500378 | MS.gene67462:intron | 55.0% | |
| TCGCCTGTGACAGGATCAAG+TGG | - | chr5.1:13495419-13495438 | None:intergenic | 55.0% | |
| ! | GCACCGACACGACAGATTGA+AGG | - | chr5.1:13497502-13497521 | None:intergenic | 55.0% |
| !! | CTGTCGTGTCGGTGCTACAT+AGG | + | chr5.1:13497507-13497526 | MS.gene67462:intron | 55.0% |
| CTCCCCGGTGCCTATTTCAG+TGG | + | chr5.1:13500358-13500377 | MS.gene67462:intron | 60.0% | |
| TAGAGGTGACTCTGGCAGGG+TGG | + | chr5.1:13497645-13497664 | MS.gene67462:CDS | 60.0% | |
| ! | CTTGTGTTGGCCGGTGGTGT+TGG | + | chr5.1:13500288-13500307 | MS.gene67462:intron | 60.0% |
| ! | GCCCACTGAAATAGGCACCG+GGG | - | chr5.1:13500363-13500382 | None:intergenic | 60.0% |
| !! | AGGCATGGAGGGACTGGTCT+AGG | + | chr5.1:13498525-13498544 | MS.gene67462:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 13493949 | 13500753 | 13493949 | ID=MS.gene67462 |
| chr5.1 | mRNA | 13493949 | 13500753 | 13493949 | ID=MS.gene67462.t1;Parent=MS.gene67462 |
| chr5.1 | exon | 13493949 | 13494134 | 13493949 | ID=MS.gene67462.t1.exon1;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13493949 | 13494134 | 13493949 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13494273 | 13494515 | 13494273 | ID=MS.gene67462.t1.exon2;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13494273 | 13494515 | 13494273 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13495152 | 13495955 | 13495152 | ID=MS.gene67462.t1.exon3;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13495152 | 13495955 | 13495152 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13496420 | 13496667 | 13496420 | ID=MS.gene67462.t1.exon4;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13496420 | 13496667 | 13496420 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13496947 | 13497106 | 13496947 | ID=MS.gene67462.t1.exon5;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13496947 | 13497106 | 13496947 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13497227 | 13497353 | 13497227 | ID=MS.gene67462.t1.exon6;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13497227 | 13497353 | 13497227 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13497626 | 13497715 | 13497626 | ID=MS.gene67462.t1.exon7;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13497626 | 13497715 | 13497626 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13497875 | 13498069 | 13497875 | ID=MS.gene67462.t1.exon8;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13497875 | 13498069 | 13497875 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13498173 | 13498242 | 13498173 | ID=MS.gene67462.t1.exon9;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13498173 | 13498242 | 13498173 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13498527 | 13498569 | 13498527 | ID=MS.gene67462.t1.exon10;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13498527 | 13498569 | 13498527 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13498842 | 13498982 | 13498842 | ID=MS.gene67462.t1.exon11;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13498842 | 13498982 | 13498842 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13499117 | 13500127 | 13499117 | ID=MS.gene67462.t1.exon12;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13499117 | 13500127 | 13499117 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| chr5.1 | exon | 13500538 | 13500753 | 13500538 | ID=MS.gene67462.t1.exon13;Parent=MS.gene67462.t1 |
| chr5.1 | CDS | 13500538 | 13500753 | 13500538 | ID=cds.MS.gene67462.t1;Parent=MS.gene67462.t1 |
| Gene Sequence |
| Protein sequence |
