Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74257.t1 | XP_003592851.1 | 97.5 | 275 | 3 | 1 | 1 | 271 | 6 | 280 | 3.90E-152 | 547.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74257.t1 | Q9ZW86 | 69.8 | 278 | 71 | 3 | 1 | 268 | 5 | 279 | 2.4e-110 | 399.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74257.t1 | G7IB16 | 97.5 | 275 | 3 | 1 | 1 | 271 | 6 | 280 | 2.8e-152 | 547.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene74257 | 0.840646 | 7.67E-58 | -1.69E-46 |
| MS.gene049666 | MS.gene74257 | 0.817766 | 2.78E-52 | -1.69E-46 |
| MS.gene049873 | MS.gene74257 | 0.813941 | 1.98E-51 | -1.69E-46 |
| MS.gene050026 | MS.gene74257 | 0.836526 | 8.89E-57 | -1.69E-46 |
| MS.gene050156 | MS.gene74257 | 0.806542 | 7.82E-50 | -1.69E-46 |
| MS.gene050201 | MS.gene74257 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene050355 | MS.gene74257 | 0.827073 | 1.91E-54 | -1.69E-46 |
| MS.gene050430 | MS.gene74257 | 0.80697 | 6.35E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene74257 | 0.800885 | 1.17E-48 | -1.69E-46 |
| MS.gene050559 | MS.gene74257 | 0.841185 | 5.54E-58 | -1.69E-46 |
| MS.gene050561 | MS.gene74257 | 0.841322 | 5.10E-58 | -1.69E-46 |
| MS.gene050562 | MS.gene74257 | 0.837404 | 5.30E-57 | -1.69E-46 |
| MS.gene050750 | MS.gene74257 | 0.814603 | 1.42E-51 | -1.69E-46 |
| MS.gene050953 | MS.gene74257 | 0.809369 | 1.96E-50 | -1.69E-46 |
| MS.gene051247 | MS.gene74257 | 0.808593 | 2.87E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene74257 | 0.833188 | 6.16E-56 | -1.69E-46 |
| MS.gene051594 | MS.gene74257 | 0.83435 | 3.15E-56 | -1.69E-46 |
| MS.gene051719 | MS.gene74257 | 0.800973 | 1.12E-48 | -1.69E-46 |
| MS.gene051744 | MS.gene74257 | 0.848 | 8.10E-60 | -1.69E-46 |
| MS.gene051957 | MS.gene74257 | 0.816312 | 5.90E-52 | -1.69E-46 |
| MS.gene052190 | MS.gene74257 | 0.806767 | 7.01E-50 | -1.69E-46 |
| MS.gene052208 | MS.gene74257 | 0.833636 | 4.76E-56 | -1.69E-46 |
| MS.gene052333 | MS.gene74257 | 0.8223 | 2.55E-53 | -1.69E-46 |
| MS.gene052488 | MS.gene74257 | 0.824746 | 6.83E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene74257 | 0.834708 | 2.56E-56 | -1.69E-46 |
| MS.gene052582 | MS.gene74257 | 0.840572 | 8.02E-58 | -1.69E-46 |
| MS.gene052584 | MS.gene74257 | 0.847073 | 1.46E-59 | -1.69E-46 |
| MS.gene052586 | MS.gene74257 | 0.816468 | 5.45E-52 | -1.69E-46 |
| MS.gene052829 | MS.gene74257 | 0.800838 | 1.19E-48 | -1.69E-46 |
| MS.gene052867 | MS.gene74257 | 0.817212 | 3.71E-52 | -1.69E-46 |
| MS.gene053006 | MS.gene74257 | 0.803424 | 3.51E-49 | -1.69E-46 |
| MS.gene053145 | MS.gene74257 | 0.813066 | 3.09E-51 | -1.69E-46 |
| MS.gene053154 | MS.gene74257 | 0.812607 | 3.89E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene74257 | 0.802357 | 5.83E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene74257 | 0.839641 | 1.40E-57 | -1.69E-46 |
| MS.gene053592 | MS.gene74257 | 0.810664 | 1.03E-50 | -1.69E-46 |
| MS.gene05365 | MS.gene74257 | 0.82058 | 6.36E-53 | -1.69E-46 |
| MS.gene053883 | MS.gene74257 | 0.834875 | 2.33E-56 | -1.69E-46 |
| MS.gene053966 | MS.gene74257 | 0.811922 | 5.50E-51 | -1.69E-46 |
| MS.gene053974 | MS.gene74257 | 0.80825 | 3.40E-50 | -1.69E-46 |
| MS.gene053998 | MS.gene74257 | 0.861032 | 1.36E-63 | -1.69E-46 |
| MS.gene05414 | MS.gene74257 | 0.805306 | 1.42E-49 | -1.69E-46 |
| MS.gene05415 | MS.gene74257 | 0.827954 | 1.18E-54 | -1.69E-46 |
| MS.gene05423 | MS.gene74257 | 0.801898 | 7.24E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene74257 | -0.825278 | 5.11E-54 | -1.69E-46 |
| MS.gene054405 | MS.gene74257 | 0.806788 | 6.94E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene74257 | 0.807283 | 5.45E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene74257 | 0.806617 | 7.54E-50 | -1.69E-46 |
| MS.gene054576 | MS.gene74257 | 0.808738 | 2.67E-50 | -1.69E-46 |
| MS.gene054651 | MS.gene74257 | 0.82479 | 6.67E-54 | -1.69E-46 |
| MS.gene054775 | MS.gene74257 | 0.812166 | 4.86E-51 | -1.69E-46 |
| MS.gene055166 | MS.gene74257 | 0.812028 | 5.21E-51 | -1.69E-46 |
| MS.gene055586 | MS.gene74257 | 0.808534 | 2.95E-50 | -1.69E-46 |
| MS.gene055589 | MS.gene74257 | 0.802785 | 4.76E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene74257 | 0.835015 | 2.15E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene74257 | 0.827434 | 1.57E-54 | -1.69E-46 |
| MS.gene056050 | MS.gene74257 | 0.837791 | 4.22E-57 | -1.69E-46 |
| MS.gene056162 | MS.gene74257 | 0.805802 | 1.12E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene74257 | 0.831335 | 1.77E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene74257 | 0.815523 | 8.85E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene74257 | 0.813316 | 2.72E-51 | -1.69E-46 |
| MS.gene056595 | MS.gene74257 | 0.803672 | 3.12E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene74257 | 0.80562 | 1.22E-49 | -1.69E-46 |
| MS.gene057026 | MS.gene74257 | 0.834948 | 2.23E-56 | -1.69E-46 |
| MS.gene057027 | MS.gene74257 | 0.821246 | 4.47E-53 | -1.69E-46 |
| MS.gene057060 | MS.gene74257 | 0.809709 | 1.65E-50 | -1.69E-46 |
| MS.gene057314 | MS.gene74257 | 0.822706 | 2.05E-53 | -1.69E-46 |
| MS.gene057414 | MS.gene74257 | 0.836835 | 7.41E-57 | -1.69E-46 |
| MS.gene057444 | MS.gene74257 | 0.824625 | 7.29E-54 | -1.69E-46 |
| MS.gene057921 | MS.gene74257 | 0.803482 | 3.41E-49 | -1.69E-46 |
| MS.gene058037 | MS.gene74257 | 0.832025 | 1.20E-55 | -1.69E-46 |
| MS.gene058625 | MS.gene74257 | 0.844042 | 9.66E-59 | -1.69E-46 |
| MS.gene058829 | MS.gene74257 | 0.805133 | 1.55E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene74257 | 0.818074 | 2.37E-52 | -1.69E-46 |
| MS.gene059015 | MS.gene74257 | 0.810457 | 1.14E-50 | -1.69E-46 |
| MS.gene059272 | MS.gene74257 | 0.843998 | 9.92E-59 | -1.69E-46 |
| MS.gene05954 | MS.gene74257 | 0.829357 | 5.39E-55 | -1.69E-46 |
| MS.gene059584 | MS.gene74257 | 0.829006 | 6.55E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene74257 | 0.839595 | 1.44E-57 | -1.69E-46 |
| MS.gene060322 | MS.gene74257 | 0.813943 | 1.98E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene74257 | 0.842504 | 2.48E-58 | -1.69E-46 |
| MS.gene060553 | MS.gene74257 | 0.802945 | 4.41E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene74257 | 0.803501 | 3.38E-49 | -1.69E-46 |
| MS.gene060919 | MS.gene74257 | 0.80425 | 2.36E-49 | -1.69E-46 |
| MS.gene061040 | MS.gene74257 | -0.816595 | 5.10E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74257.t1 | MTR_1g116810 | 97.101 | 276 | 4 | 1 | 1 | 272 | 6 | 281 | 0.0 | 556 |
| MS.gene74257.t1 | MTR_5g022960 | 47.253 | 273 | 122 | 7 | 4 | 267 | 24 | 283 | 4.18e-72 | 223 |
| MS.gene74257.t1 | MTR_3g114670 | 52.607 | 211 | 82 | 3 | 67 | 266 | 70 | 273 | 3.23e-70 | 218 |
| MS.gene74257.t1 | MTR_8g074810 | 53.110 | 209 | 86 | 3 | 67 | 267 | 68 | 272 | 9.40e-70 | 216 |
| MS.gene74257.t1 | MTR_8g074830 | 52.632 | 209 | 87 | 3 | 67 | 267 | 71 | 275 | 2.99e-68 | 213 |
| MS.gene74257.t1 | MTR_8g074890 | 48.444 | 225 | 96 | 4 | 51 | 267 | 59 | 271 | 5.01e-68 | 212 |
| MS.gene74257.t1 | MTR_8g074880 | 49.519 | 208 | 93 | 3 | 67 | 266 | 116 | 319 | 2.39e-63 | 202 |
| MS.gene74257.t1 | MTR_6g009440 | 48.558 | 208 | 90 | 3 | 69 | 266 | 54 | 254 | 7.79e-62 | 197 |
| MS.gene74257.t1 | MTR_4g118560 | 47.418 | 213 | 96 | 3 | 65 | 266 | 36 | 243 | 1.06e-59 | 191 |
| MS.gene74257.t1 | MTR_2g020800 | 45.794 | 214 | 100 | 3 | 64 | 266 | 38 | 246 | 5.97e-57 | 184 |
| MS.gene74257.t1 | MTR_2g020800 | 45.370 | 216 | 100 | 3 | 64 | 266 | 38 | 248 | 1.19e-56 | 184 |
| MS.gene74257.t1 | MTR_8g074870 | 46.411 | 209 | 86 | 5 | 67 | 267 | 29 | 219 | 7.55e-56 | 179 |
| MS.gene74257.t1 | MTR_3g114610 | 48.259 | 201 | 101 | 2 | 67 | 266 | 97 | 295 | 5.08e-55 | 179 |
| MS.gene74257.t1 | MTR_3g114590 | 49.000 | 200 | 100 | 1 | 67 | 266 | 65 | 262 | 8.94e-55 | 186 |
| MS.gene74257.t1 | MTR_3g114590 | 42.935 | 184 | 88 | 2 | 83 | 266 | 293 | 459 | 7.67e-34 | 129 |
| MS.gene74257.t1 | MTR_5g016090 | 37.500 | 248 | 144 | 5 | 28 | 271 | 51 | 291 | 1.34e-46 | 157 |
| MS.gene74257.t1 | MTR_4g095370 | 37.553 | 237 | 137 | 4 | 36 | 268 | 61 | 290 | 4.55e-43 | 149 |
| MS.gene74257.t1 | MTR_5g022960 | 45.550 | 191 | 92 | 5 | 4 | 193 | 24 | 203 | 1.07e-42 | 145 |
| MS.gene74257.t1 | MTR_6g053720 | 34.500 | 200 | 111 | 5 | 69 | 266 | 57 | 238 | 2.37e-30 | 115 |
| MS.gene74257.t1 | MTR_3g051200 | 45.669 | 127 | 66 | 2 | 81 | 207 | 25 | 148 | 4.74e-25 | 97.8 |
| MS.gene74257.t1 | MTR_4g095370 | 33.333 | 153 | 93 | 3 | 36 | 186 | 61 | 206 | 5.30e-17 | 78.2 |
| MS.gene74257.t1 | MTR_4g095370 | 34.043 | 141 | 84 | 3 | 36 | 174 | 61 | 194 | 7.50e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74257.t1 | AT2G43080 | 69.784 | 278 | 71 | 3 | 1 | 268 | 5 | 279 | 5.45e-145 | 408 |
| MS.gene74257.t1 | AT1G20270 | 56.459 | 209 | 77 | 3 | 67 | 266 | 77 | 280 | 8.09e-73 | 225 |
| MS.gene74257.t1 | AT4G35810 | 50.206 | 243 | 101 | 5 | 34 | 266 | 52 | 284 | 6.59e-71 | 220 |
| MS.gene74257.t1 | AT4G35810 | 50.206 | 243 | 101 | 5 | 34 | 266 | 52 | 284 | 6.59e-71 | 220 |
| MS.gene74257.t1 | AT5G66060 | 48.963 | 241 | 98 | 4 | 38 | 267 | 57 | 283 | 9.52e-70 | 217 |
| MS.gene74257.t1 | AT2G43080 | 60.556 | 180 | 58 | 3 | 1 | 170 | 5 | 181 | 4.40e-69 | 212 |
| MS.gene74257.t1 | AT2G17720 | 52.857 | 210 | 83 | 4 | 67 | 266 | 81 | 284 | 5.86e-67 | 210 |
| MS.gene74257.t1 | AT3G28480 | 44.712 | 208 | 98 | 3 | 69 | 266 | 59 | 259 | 1.53e-57 | 187 |
| MS.gene74257.t1 | AT3G06300 | 46.698 | 212 | 99 | 3 | 65 | 266 | 37 | 244 | 6.11e-57 | 184 |
| MS.gene74257.t1 | AT3G28490 | 47.087 | 206 | 97 | 4 | 69 | 266 | 35 | 236 | 1.18e-56 | 183 |
| MS.gene74257.t1 | AT5G18900 | 45.070 | 213 | 101 | 3 | 65 | 266 | 36 | 243 | 6.04e-55 | 179 |
| MS.gene74257.t1 | AT3G28480 | 41.121 | 214 | 105 | 4 | 69 | 266 | 59 | 267 | 2.79e-47 | 160 |
| MS.gene74257.t1 | AT5G66060 | 50.588 | 170 | 73 | 3 | 38 | 207 | 57 | 215 | 6.45e-46 | 154 |
| MS.gene74257.t1 | AT1G20270 | 59.055 | 127 | 50 | 1 | 67 | 193 | 77 | 201 | 2.96e-43 | 146 |
| MS.gene74257.t1 | AT1G20270 | 59.055 | 127 | 50 | 1 | 67 | 193 | 77 | 201 | 2.96e-43 | 146 |
| MS.gene74257.t1 | AT4G35820 | 45.833 | 192 | 78 | 4 | 67 | 250 | 89 | 262 | 6.07e-43 | 147 |
| MS.gene74257.t1 | AT4G33910 | 38.428 | 229 | 130 | 4 | 43 | 267 | 61 | 282 | 1.93e-42 | 147 |
| MS.gene74257.t1 | AT2G23096 | 34.466 | 206 | 129 | 3 | 69 | 271 | 71 | 273 | 2.31e-34 | 125 |
| MS.gene74257.t1 | AT4G25600 | 29.694 | 229 | 130 | 6 | 50 | 272 | 40 | 243 | 2.16e-22 | 94.4 |
| MS.gene74257.t1 | AT4G25600 | 29.703 | 202 | 114 | 5 | 74 | 272 | 6 | 182 | 1.40e-18 | 82.8 |
| MS.gene74257.t1 | AT4G25600 | 29.703 | 202 | 114 | 5 | 74 | 272 | 15 | 191 | 1.64e-18 | 82.8 |
| MS.gene74257.t1 | AT4G25600 | 29.703 | 202 | 114 | 5 | 74 | 272 | 3 | 179 | 1.64e-18 | 82.4 |
Find 60 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTACAATGCTTATGTATTT+AGG | 0.204792 | 1.1:-82243891 | MS.gene74257:CDS |
| GTCACAATCGGAATGATTAT+TGG | 0.231053 | 1.1:-82244622 | MS.gene74257:intron |
| ACGAGGAATGTGATTATCTT+AGG | 0.235744 | 1.1:-82244310 | MS.gene74257:CDS |
| TCTCAAATTCCAATTGAAAA+TGG | 0.255513 | 1.1:-82244128 | MS.gene74257:CDS |
| GAAGTTGTTGTTGTTGTAAA+TGG | 0.279988 | 1.1:+82244461 | None:intergenic |
| AGCACAGCATTTCCTTTAAC+TGG | 0.282461 | 1.1:+82242546 | None:intergenic |
| GGAGGATGCCCGGTACTTGC+TGG | 0.290409 | 1.1:-82242347 | MS.gene74257:CDS |
| GTCGTCGTTATTATAACCTC+TGG | 0.331910 | 1.1:+82244424 | None:intergenic |
| TTATGTGTGAAACCAGTTAA+AGG | 0.389095 | 1.1:-82242558 | MS.gene74257:CDS |
| AGTGATGTCAGAACAAGTTC+TGG | 0.417022 | 1.1:-82244221 | MS.gene74257:CDS |
| GGAGACCAACTAAGGACTTC+AGG | 0.418550 | 1.1:+82244365 | None:intergenic |
| CGAGGAATGTGATTATCTTA+GGG | 0.422123 | 1.1:-82244309 | MS.gene74257:CDS |
| TGCAGGTGCTCTCTCTCAAT+TGG | 0.426323 | 1.1:-82244513 | MS.gene74257:intron |
| CTTCTCACTTTCGTCACAAT+CGG | 0.443635 | 1.1:-82244634 | MS.gene74257:CDS |
| TCGTCGTTATTATAACCTCT+GGG | 0.448332 | 1.1:+82244425 | None:intergenic |
| TGGTTTCACACATAACCCTT+TGG | 0.454448 | 1.1:+82242566 | None:intergenic |
| CATCCTCCATGCACACTATC+CGG | 0.458292 | 1.1:+82242362 | None:intergenic |
| CACTTCTCCCCAGCAAGTAC+CGG | 0.463904 | 1.1:+82242338 | None:intergenic |
| GAGGATGCCCGGTACTTGCT+GGG | 0.470338 | 1.1:-82242346 | MS.gene74257:CDS |
| TATTTAGGTGACAATGTTGA+GGG | 0.478530 | 1.1:-82243876 | MS.gene74257:CDS |
| TTAAACCTGAAGTCCTTAGT+TGG | 0.490970 | 1.1:-82244370 | MS.gene74257:CDS |
| GTCGATGCAAACACAGGAAA+GGG | 0.501803 | 1.1:-82244251 | MS.gene74257:CDS |
| GAAGCACAAATCTTACGCCT+TGG | 0.505360 | 1.1:-82244398 | MS.gene74257:CDS |
| CCGGCGATGAAGATTGTGTT+CGG | 0.507131 | 1.1:-82244658 | None:intergenic |
| AGGTGACAATGTTGAGGGAG+GGG | 0.507663 | 1.1:-82243871 | MS.gene74257:CDS |
| GAGAGCTTATGCAAGTCCTT+AGG | 0.507911 | 1.1:-82244106 | MS.gene74257:CDS |
| TTATGAAGTAAAATAATTCG+TGG | 0.516165 | 1.1:+82244344 | None:intergenic |
| TGGTATTATCAGGGACTGGA+TGG | 0.528484 | 1.1:-82242395 | MS.gene74257:intron |
| TAGGTGACAATGTTGAGGGA+GGG | 0.530460 | 1.1:-82243872 | MS.gene74257:CDS |
| ACTGGATGGACAGTCAGATC+CGG | 0.531985 | 1.1:-82242381 | MS.gene74257:CDS |
| CGGTACTTGCTGGGGAGAAG+TGG | 0.535804 | 1.1:-82242337 | MS.gene74257:CDS |
| TAGTGTGCATGGAGGATGCC+CGG | 0.552060 | 1.1:-82242357 | MS.gene74257:CDS |
| TTAGGTGACAATGTTGAGGG+AGG | 0.555757 | 1.1:-82243873 | MS.gene74257:CDS |
| GTATTTAGGTGACAATGTTG+AGG | 0.557593 | 1.1:-82243877 | MS.gene74257:CDS |
| GTGGTGGGAAATTAACCAAA+GGG | 0.569757 | 1.1:-82242581 | MS.gene74257:CDS |
| TAAGCATTGTAGCTATTCGC+TGG | 0.573513 | 1.1:+82243901 | None:intergenic |
| TAATTCGTGGAGACCAACTA+AGG | 0.573940 | 1.1:+82244357 | None:intergenic |
| CGTCGATGCAAACACAGGAA+AGG | 0.581169 | 1.1:-82244252 | MS.gene74257:CDS |
| ACTGATTCTTCTCATACCTA+AGG | 0.583409 | 1.1:+82244090 | None:intergenic |
| TCAGATCCGGATAGTGTGCA+TGG | 0.584101 | 1.1:-82242368 | MS.gene74257:CDS |
| ACTTCTCCCCAGCAAGTACC+GGG | 0.590424 | 1.1:+82242339 | None:intergenic |
| GGTCGGCTACAAAGTGGATG+AGG | 0.597597 | 1.1:-82242316 | MS.gene74257:CDS |
| CTTCAGGTTTAACATATCCA+AGG | 0.599046 | 1.1:+82244381 | None:intergenic |
| CAGTTCAATTTGAAGCGTGG+TGG | 0.599421 | 1.1:-82243924 | MS.gene74257:CDS |
| AATCACATTCCTCGTAGCTG+AGG | 0.604915 | 1.1:+82244318 | None:intergenic |
| TCAGATGAATGTAGCTGTGG+TGG | 0.613560 | 1.1:-82242597 | MS.gene74257:CDS |
| AGGATGCCCGGTACTTGCTG+GGG | 0.623094 | 1.1:-82242345 | MS.gene74257:CDS |
| AGAAGTGGTCGGCTACAAAG+TGG | 0.632725 | 1.1:-82242322 | MS.gene74257:CDS |
| GAGGAATGTGATTATCTTAG+GGG | 0.634805 | 1.1:-82244308 | MS.gene74257:CDS |
| TAACAGTTCAATTTGAAGCG+TGG | 0.636945 | 1.1:-82243927 | MS.gene74257:intron |
| TGTGGTGGGAAATTAACCAA+AGG | 0.637747 | 1.1:-82242582 | MS.gene74257:CDS |
| CAGATGAATGTAGCTGTGGT+GGG | 0.637801 | 1.1:-82242596 | MS.gene74257:CDS |
| GGTTCAGATGAATGTAGCTG+TGG | 0.641033 | 1.1:-82242600 | MS.gene74257:CDS |
| ACTTGCTGGGGAGAAGTGGT+CGG | 0.648554 | 1.1:-82242333 | MS.gene74257:CDS |
| AGGGGAAACGCATTTCCCAT+CGG | 0.656658 | 1.1:-82243853 | MS.gene74257:intron |
| ACTGTCGTCGATGCAAACAC+AGG | 0.669566 | 1.1:-82244257 | MS.gene74257:CDS |
| CGTCGTTATTATAACCTCTG+GGG | 0.670331 | 1.1:+82244426 | None:intergenic |
| GATCCGGATAGTGTGCATGG+AGG | 0.746880 | 1.1:-82242365 | MS.gene74257:CDS |
| TCATAACTTCCTCAGCTACG+AGG | 0.747861 | 1.1:-82244327 | MS.gene74257:CDS |
| TCAAGATCACTACTCCCCAG+AGG | 0.760039 | 1.1:-82244440 | MS.gene74257:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAAAAAAAAAAAAAA+AGG | + | chr1.1:82243388-82243407 | None:intergenic | 0.0% |
| !! | TTAAAAAAAAAAAAAAAAAA+GGG | + | chr1.1:82243387-82243406 | None:intergenic | 0.0% |
| !!! | GATTTTTAACATAACAAAAA+GGG | + | chr1.1:82243893-82243912 | None:intergenic | 15.0% |
| !!! | TGTTTTTTTACGAATATATA+CGG | + | chr1.1:82243482-82243501 | None:intergenic | 15.0% |
| !!! | TTTTTGTTATGTTAAAAATC+CGG | - | chr1.1:82243893-82243912 | MS.gene74257:CDS | 15.0% |
| !! | TTATGAAGTAAAATAATTCG+TGG | + | chr1.1:82242609-82242628 | None:intergenic | 20.0% |
| !!! | AGATTGATTTAAATTGCATT+TGG | + | chr1.1:82244146-82244165 | None:intergenic | 20.0% |
| !!! | ATTCTAGAAAACTTGTTATA+TGG | - | chr1.1:82244506-82244525 | MS.gene74257:CDS | 20.0% |
| !!! | GGATTTTTAACATAACAAAA+AGG | + | chr1.1:82243894-82243913 | None:intergenic | 20.0% |
| ! | AGTTCAATTTGGATTATTCT+GGG | - | chr1.1:82243257-82243276 | MS.gene74257:intron | 25.0% |
| ! | ATATCTTCTGCTATAGATTA+AGG | + | chr1.1:82243159-82243178 | None:intergenic | 25.0% |
| ! | ATCAGAAAAATAGTCATGAT+GGG | + | chr1.1:82242895-82242914 | None:intergenic | 25.0% |
| ! | ATTGCGAAGAATAAAAATTC+CGG | + | chr1.1:82243839-82243858 | None:intergenic | 25.0% |
| ! | CATTCATAATGAGTTCAATT+TGG | - | chr1.1:82243246-82243265 | MS.gene74257:intron | 25.0% |
| ! | TATCAGAAAAATAGTCATGA+TGG | + | chr1.1:82242896-82242915 | None:intergenic | 25.0% |
| ! | TATCTTCTGCTATAGATTAA+GGG | + | chr1.1:82243158-82243177 | None:intergenic | 25.0% |
| ! | TCTCAAATTCCAATTGAAAA+TGG | - | chr1.1:82242822-82242841 | MS.gene74257:intron | 25.0% |
| ! | TTGAACTCATTATGAATGAA+AGG | + | chr1.1:82243244-82243263 | None:intergenic | 25.0% |
| !! | TCAAATGATAGTTTTCGAAA+AGG | + | chr1.1:82243132-82243151 | None:intergenic | 25.0% |
| !! | TTGTTATTAATGAAGTGGTT+TGG | + | chr1.1:82244057-82244076 | None:intergenic | 25.0% |
| !! | TTTGGTTGTTATTAATGAAG+TGG | + | chr1.1:82244062-82244081 | None:intergenic | 25.0% |
| !! | TTTTAACATAACAAAAAGGG+TGG | + | chr1.1:82243890-82243909 | None:intergenic | 25.0% |
| !! | TTTTCAAAGTAGATAACAAG+TGG | - | chr1.1:82243280-82243299 | MS.gene74257:intron | 25.0% |
| !! | TTTTCAATTGCATGTATCAT+AGG | + | chr1.1:82242786-82242805 | None:intergenic | 25.0% |
| AAAAAAAAAAGGGAGACACA+AGG | + | chr1.1:82243377-82243396 | None:intergenic | 30.0% | |
| AATGAAAGGAATGTGGAATA+AGG | + | chr1.1:82243230-82243249 | None:intergenic | 30.0% | |
| ACTAATAAGAAAATCCGGAA+AGG | + | chr1.1:82243973-82243992 | None:intergenic | 30.0% | |
| AGATGAATGATTTCCTTCAA+AGG | + | chr1.1:82244458-82244477 | None:intergenic | 30.0% | |
| CATTATGAATGAAAGGAATG+TGG | + | chr1.1:82243237-82243256 | None:intergenic | 30.0% | |
| CATTCATAAAACATACAAGC+CGG | - | chr1.1:82243817-82243836 | MS.gene74257:intron | 30.0% | |
| CTAATAAGAAAATCCGGAAA+GGG | + | chr1.1:82243972-82243991 | None:intergenic | 30.0% | |
| CTATTATCAAACACTCTAGT+TGG | - | chr1.1:82244273-82244292 | MS.gene74257:CDS | 30.0% | |
| GAGTTCAATTTGGATTATTC+TGG | - | chr1.1:82243256-82243275 | MS.gene74257:intron | 30.0% | |
| GATAGTAATTCTTATCTGCT+TGG | - | chr1.1:82244535-82244554 | MS.gene74257:intron | 30.0% | |
| GCTACAATGCTTATGTATTT+AGG | - | chr1.1:82243059-82243078 | MS.gene74257:intron | 30.0% | |
| GGGTAACTAATAAGAAAATC+CGG | + | chr1.1:82243978-82243997 | None:intergenic | 30.0% | |
| TAGTATAACTTTGCCTTTGA+AGG | - | chr1.1:82244442-82244461 | MS.gene74257:CDS | 30.0% | |
| TATTTAGGTGACAATGTTGA+GGG | - | chr1.1:82243074-82243093 | MS.gene74257:intron | 30.0% | |
| TCAGAAAAATAGTCATGATG+GGG | + | chr1.1:82242894-82242913 | None:intergenic | 30.0% | |
| TGTTGTTGAGTTCTTGATTA+GGG | + | chr1.1:82243528-82243547 | None:intergenic | 30.0% | |
| TTATCTGCTTGGTATTATCA+GGG | - | chr1.1:82244546-82244565 | MS.gene74257:intron | 30.0% | |
| TTATGTGTGAAACCAGTTAA+AGG | - | chr1.1:82244392-82244411 | MS.gene74257:CDS | 30.0% | |
| TTCCTACTGATAAACAAGTT+TGG | - | chr1.1:82244012-82244031 | MS.gene74257:intron | 30.0% | |
| TTTGAAGGAAATCATTCATC+TGG | - | chr1.1:82244457-82244476 | MS.gene74257:CDS | 30.0% | |
| ! | AACACTTGCATTTTACACAT+TGG | + | chr1.1:82244229-82244248 | None:intergenic | 30.0% |
| ! | ACACTTGCATTTTACACATT+GGG | + | chr1.1:82244228-82244247 | None:intergenic | 30.0% |
| ! | ATAAGCTCTCCATTTTCAAT+TGG | + | chr1.1:82242834-82242853 | None:intergenic | 30.0% |
| ! | ATGATCGAATCGATTCAATT+TGG | - | chr1.1:82242405-82242424 | MS.gene74257:intron | 30.0% |
| ! | ATGTATTTCGTTGTTTCATG+CGG | + | chr1.1:82243437-82243456 | None:intergenic | 30.0% |
| ! | GAAGTTGTTGTTGTTGTAAA+TGG | + | chr1.1:82242492-82242511 | None:intergenic | 30.0% |
| ! | GTATGTTTTATGAATGGTAG+TGG | + | chr1.1:82243813-82243832 | None:intergenic | 30.0% |
| ! | TGATCGAATCGATTCAATTT+GGG | - | chr1.1:82242406-82242425 | MS.gene74257:intron | 30.0% |
| ! | TTGTTGTTGAGTTCTTGATT+AGG | + | chr1.1:82243529-82243548 | None:intergenic | 30.0% |
| !!! | AGGTAATGAGGTATTTTTTC+TGG | + | chr1.1:82243769-82243788 | None:intergenic | 30.0% |
| !!! | GGTAATGAGGTATTTTTTCT+GGG | + | chr1.1:82243768-82243787 | None:intergenic | 30.0% |
| AACAAAAAGGGTGGAAGATT+TGG | + | chr1.1:82243881-82243900 | None:intergenic | 35.0% | |
| AACTGTTAAGCAAGCAGAAA+GGG | + | chr1.1:82243011-82243030 | None:intergenic | 35.0% | |
| AAGGAATGTGGAATAAGGTT+TGG | + | chr1.1:82243225-82243244 | None:intergenic | 35.0% | |
| ACGAGGAATGTGATTATCTT+AGG | - | chr1.1:82242640-82242659 | MS.gene74257:intron | 35.0% | |
| AGAACAACCTCAAAATGACA+AGG | - | chr1.1:82243686-82243705 | MS.gene74257:intron | 35.0% | |
| ATGCGGCTATTTGGATTATT+TGG | + | chr1.1:82243933-82243952 | None:intergenic | 35.0% | |
| CACAAAAGATACATGCATCT+AGG | + | chr1.1:82243188-82243207 | None:intergenic | 35.0% | |
| CGAGGAATGTGATTATCTTA+GGG | - | chr1.1:82242641-82242660 | MS.gene74257:intron | 35.0% | |
| CTACTGATAAACAAGTTTGG+TGG | - | chr1.1:82244015-82244034 | MS.gene74257:intron | 35.0% | |
| CTTATCTGCTTGGTATTATC+AGG | - | chr1.1:82244545-82244564 | MS.gene74257:intron | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | + | chr1.1:82242371-82242390 | None:intergenic | 35.0% | |
| GAGGAATGTGATTATCTTAG+GGG | - | chr1.1:82242642-82242661 | MS.gene74257:intron | 35.0% | |
| GTATTTAGGTGACAATGTTG+AGG | - | chr1.1:82243073-82243092 | MS.gene74257:intron | 35.0% | |
| GTCACAATCGGAATGATTAT+TGG | - | chr1.1:82242328-82242347 | MS.gene74257:CDS | 35.0% | |
| TCGTCGTTATTATAACCTCT+GGG | + | chr1.1:82242528-82242547 | None:intergenic | 35.0% | |
| TTAAACCTGAAGTCCTTAGT+TGG | - | chr1.1:82242580-82242599 | MS.gene74257:CDS | 35.0% | |
| ! | ACTGATTCTTCTCATACCTA+AGG | + | chr1.1:82242863-82242882 | None:intergenic | 35.0% |
| ! | CAATTTGGGATTACAATTGC+AGG | - | chr1.1:82242420-82242439 | MS.gene74257:intron | 35.0% |
| ! | CACCAAACTTGTTTATCAGT+AGG | + | chr1.1:82244017-82244036 | None:intergenic | 35.0% |
| ! | CGGCTTGTATGTTTTATGAA+TGG | + | chr1.1:82243819-82243838 | None:intergenic | 35.0% |
| ! | CTTCAGGTTTAACATATCCA+AGG | + | chr1.1:82242572-82242591 | None:intergenic | 35.0% |
| ! | GTATCTTTTGTGTTTTGTCC+CGG | - | chr1.1:82243196-82243215 | MS.gene74257:intron | 35.0% |
| ! | GTGTTGTAGTATCTGTTTTG+AGG | + | chr1.1:82243568-82243587 | None:intergenic | 35.0% |
| ! | TAACAGTTCAATTTGAAGCG+TGG | - | chr1.1:82243023-82243042 | MS.gene74257:intron | 35.0% |
| ! | TGTATTTCGTTGTTTCATGC+GGG | + | chr1.1:82243436-82243455 | None:intergenic | 35.0% |
| ! | TGTTTATCAGTAGGAAGTGT+TGG | + | chr1.1:82244008-82244027 | None:intergenic | 35.0% |
| !! | AAATTGCATTTGGTGTACGA+TGG | + | chr1.1:82244136-82244155 | None:intergenic | 35.0% |
| !! | AATTGCATTTGGTGTACGAT+GGG | + | chr1.1:82244135-82244154 | None:intergenic | 35.0% |
| !!! | ACAGTTGAAATTTTGAGACG+AGG | + | chr1.1:82242678-82242697 | None:intergenic | 35.0% |
| !!! | CAGTTGAAATTTTGAGACGA+GGG | + | chr1.1:82242677-82242696 | None:intergenic | 35.0% |
| !!! | GAGTTTTCCTTGTCATTTTG+AGG | + | chr1.1:82243696-82243715 | None:intergenic | 35.0% |
| !!! | GATTGTCTTTTGAGGTAATG+AGG | + | chr1.1:82243781-82243800 | None:intergenic | 35.0% |
| AAAAAGGGTGGAAGATTTGG+TGG | + | chr1.1:82243878-82243897 | None:intergenic | 40.0% | |
| AAAAGGAGAAGCTTACCGAT+GGG | + | chr1.1:82243115-82243134 | None:intergenic | 40.0% | |
| AAAGGGTTGCATTGCAATTG+AGG | + | chr1.1:82242994-82243013 | None:intergenic | 40.0% | |
| AGCACAGCATTTCCTTTAAC+TGG | + | chr1.1:82244407-82244426 | None:intergenic | 40.0% | |
| AGTGATGTCAGAACAAGTTC+TGG | - | chr1.1:82242729-82242748 | MS.gene74257:intron | 40.0% | |
| ATAAGAAAATCCGGAAAGGG+AGG | + | chr1.1:82243969-82243988 | None:intergenic | 40.0% | |
| CAAGAAGGAATCTTGCGATT+AGG | + | chr1.1:82244179-82244198 | None:intergenic | 40.0% | |
| CGTCGTTATTATAACCTCTG+GGG | + | chr1.1:82242527-82242546 | None:intergenic | 40.0% | |
| CTAATCGCAAGATTCCTTCT+TGG | - | chr1.1:82244177-82244196 | MS.gene74257:CDS | 40.0% | |
| CTTCTCACTTTCGTCACAAT+CGG | - | chr1.1:82242316-82242335 | MS.gene74257:CDS | 40.0% | |
| GAACTGTTAAGCAAGCAGAA+AGG | + | chr1.1:82243012-82243031 | None:intergenic | 40.0% | |
| GATAGTATGCAATGCGTTTC+AGG | - | chr1.1:82244325-82244344 | MS.gene74257:CDS | 40.0% | |
| GGTTATAGGCAAATCCAAGA+AGG | + | chr1.1:82244194-82244213 | None:intergenic | 40.0% | |
| GTCGTCGTTATTATAACCTC+TGG | + | chr1.1:82242529-82242548 | None:intergenic | 40.0% | |
| GTGGAATAAGGTTTGGATTC+CGG | + | chr1.1:82243218-82243237 | None:intergenic | 40.0% | |
| TAATTCGTGGAGACCAACTA+AGG | + | chr1.1:82242596-82242615 | None:intergenic | 40.0% | |
| TACCTCAAAAGACAATCGCT+CGG | - | chr1.1:82243784-82243803 | MS.gene74257:intron | 40.0% | |
| TGGAATAAGGTTTGGATTCC+GGG | + | chr1.1:82243217-82243236 | None:intergenic | 40.0% | |
| TGGTTTCACACATAACCCTT+TGG | + | chr1.1:82244387-82244406 | None:intergenic | 40.0% | |
| TTTGGAAAGCGAGAAATGAC+CGG | + | chr1.1:82243915-82243934 | None:intergenic | 40.0% | |
| ! | AAGGAAATGCTGTGCTTTTC+TGG | - | chr1.1:82244411-82244430 | MS.gene74257:CDS | 40.0% |
| ! | GTGGTGGGAAATTAACCAAA+GGG | - | chr1.1:82244369-82244388 | MS.gene74257:CDS | 40.0% |
| ! | TAAGCATTGTAGCTATTCGC+TGG | + | chr1.1:82243052-82243071 | None:intergenic | 40.0% |
| ! | TGTGGTGGGAAATTAACCAA+AGG | - | chr1.1:82244368-82244387 | MS.gene74257:CDS | 40.0% |
| !! | AGATTTGGTGGAGGAGATTA+AGG | + | chr1.1:82243866-82243885 | None:intergenic | 40.0% |
| !! | ATTGCATTTGGTGTACGATG+GGG | + | chr1.1:82244134-82244153 | None:intergenic | 40.0% |
| !! | GGTGTTTTTGTGTTTCTGTC+AGG | + | chr1.1:82243621-82243640 | None:intergenic | 40.0% |
| !! | TGTTTCTGTCAGGTTTTGAC+AGG | + | chr1.1:82243611-82243630 | None:intergenic | 40.0% |
| !! | TTGATTAGGGAGCTGTTTTG+AGG | + | chr1.1:82243515-82243534 | None:intergenic | 40.0% |
| !!! | AGCTGTTTTGAGGTTCTATG+GGG | + | chr1.1:82243505-82243524 | None:intergenic | 40.0% |
| !!! | AGGTATTTTTTCTGGGATGC+TGG | + | chr1.1:82243761-82243780 | None:intergenic | 40.0% |
| !!! | GAGCTGTTTTGAGGTTCTAT+GGG | + | chr1.1:82243506-82243525 | None:intergenic | 40.0% |
| !!! | GGACATTTTGACTCTACTCA+AGG | - | chr1.1:82244294-82244313 | MS.gene74257:CDS | 40.0% |
| !!! | TGAAATTTTGAGACGAGGGA+GGG | + | chr1.1:82242673-82242692 | None:intergenic | 40.0% |
| !!! | TTGAAATTTTGAGACGAGGG+AGG | + | chr1.1:82242674-82242693 | None:intergenic | 40.0% |
| AATCACATTCCTCGTAGCTG+AGG | + | chr1.1:82242635-82242654 | None:intergenic | 45.0% | |
| ACACATTGGGCATGTTTCTC+AGG | + | chr1.1:82244215-82244234 | None:intergenic | 45.0% | |
| ACATACGCGACGAAAAAGAG+AGG | - | chr1.1:82243453-82243472 | MS.gene74257:intron | 45.0% | |
| ACCTCAAAAGACAATCGCTC+GGG | - | chr1.1:82243785-82243804 | MS.gene74257:intron | 45.0% | |
| CAGATGAATGTAGCTGTGGT+GGG | - | chr1.1:82244354-82244373 | MS.gene74257:CDS | 45.0% | |
| CTTATTCCTGCATTGCGAGT+TGG | + | chr1.1:82244094-82244113 | None:intergenic | 45.0% | |
| GAAAAGGAGAAGCTTACCGA+TGG | + | chr1.1:82243116-82243135 | None:intergenic | 45.0% | |
| GAAGCACAAATCTTACGCCT+TGG | - | chr1.1:82242552-82242571 | MS.gene74257:CDS | 45.0% | |
| GAGAGCTTATGCAAGTCCTT+AGG | - | chr1.1:82242844-82242863 | MS.gene74257:intron | 45.0% | |
| GGGCATGTTTCTCAGGTTAT+AGG | + | chr1.1:82244208-82244227 | None:intergenic | 45.0% | |
| GGTTCAGATGAATGTAGCTG+TGG | - | chr1.1:82244350-82244369 | MS.gene74257:CDS | 45.0% | |
| GTCGATGCAAACACAGGAAA+GGG | - | chr1.1:82242699-82242718 | MS.gene74257:intron | 45.0% | |
| TAGGTGACAATGTTGAGGGA+GGG | - | chr1.1:82243078-82243097 | MS.gene74257:intron | 45.0% | |
| TCAGATGAATGTAGCTGTGG+TGG | - | chr1.1:82244353-82244372 | MS.gene74257:CDS | 45.0% | |
| TCATAACTTCCTCAGCTACG+AGG | - | chr1.1:82242623-82242642 | MS.gene74257:intron | 45.0% | |
| TGCTTGGTATTATCAGGGAC+TGG | - | chr1.1:82244551-82244570 | MS.gene74257:intron | 45.0% | |
| TGGTATTATCAGGGACTGGA+TGG | - | chr1.1:82244555-82244574 | MS.gene74257:intron | 45.0% | |
| TTAGGTGACAATGTTGAGGG+AGG | - | chr1.1:82243077-82243096 | MS.gene74257:intron | 45.0% | |
| ! | CAGTTCAATTTGAAGCGTGG+TGG | - | chr1.1:82243026-82243045 | MS.gene74257:intron | 45.0% |
| !! | ATCAGTAGGAAGTGTTGGAG+TGG | + | chr1.1:82244003-82244022 | None:intergenic | 45.0% |
| !! | TCAGTAGGAAGTGTTGGAGT+GGG | + | chr1.1:82244002-82244021 | None:intergenic | 45.0% |
| !! | TTGCATTTGGTGTACGATGG+GGG | + | chr1.1:82244133-82244152 | None:intergenic | 45.0% |
| !!! | ATTTTTTCTGGGATGCTGGC+AGG | + | chr1.1:82243757-82243776 | None:intergenic | 45.0% |
| !!! | GGAGCTGTTTTGAGGTTCTA+TGG | + | chr1.1:82243507-82243526 | None:intergenic | 45.0% |
| !!! | TGCTGTGCTTTTCTGGAGTA+TGG | - | chr1.1:82244418-82244437 | MS.gene74257:CDS | 45.0% |
| ACTCTATCCACCTCCCTTTC+CGG | - | chr1.1:82243956-82243975 | MS.gene74257:intron | 50.0% | |
| ACTGGATGGACAGTCAGATC+CGG | - | chr1.1:82244569-82244588 | MS.gene74257:intron | 50.0% | |
| ACTGTCGTCGATGCAAACAC+AGG | - | chr1.1:82242693-82242712 | MS.gene74257:intron | 50.0% | |
| AGAAAATCCGGAAAGGGAGG+TGG | + | chr1.1:82243966-82243985 | None:intergenic | 50.0% | |
| AGAAGTGGTCGGCTACAAAG+TGG | - | chr1.1:82244628-82244647 | MS.gene74257:CDS | 50.0% | |
| AGGGGAAACGCATTTCCCAT+CGG | - | chr1.1:82243097-82243116 | MS.gene74257:intron | 50.0% | |
| AGGTGACAATGTTGAGGGAG+GGG | - | chr1.1:82243079-82243098 | MS.gene74257:intron | 50.0% | |
| CATCCTCCATGCACACTATC+CGG | + | chr1.1:82244591-82244610 | None:intergenic | 50.0% | |
| CGTCGATGCAAACACAGGAA+AGG | - | chr1.1:82242698-82242717 | MS.gene74257:intron | 50.0% | |
| GGAGACCAACTAAGGACTTC+AGG | + | chr1.1:82242588-82242607 | None:intergenic | 50.0% | |
| GTATGCAATGCGTTTCAGGC+TGG | - | chr1.1:82244329-82244348 | MS.gene74257:CDS | 50.0% | |
| TAGAGTGGCATGCGGCTATT+TGG | + | chr1.1:82243942-82243961 | None:intergenic | 50.0% | |
| TCAAGATCACTACTCCCCAG+AGG | - | chr1.1:82242510-82242529 | MS.gene74257:intron | 50.0% | |
| TCAGATCCGGATAGTGTGCA+TGG | - | chr1.1:82244582-82244601 | MS.gene74257:intron | 50.0% | |
| TGACAGGTGCAGATAGCAGT+AGG | + | chr1.1:82243595-82243614 | None:intergenic | 50.0% | |
| TGCAGGTGCTCTCTCTCAAT+TGG | - | chr1.1:82242437-82242456 | MS.gene74257:intron | 50.0% | |
| ! | ACCCGAGCGATTGTCTTTTG+AGG | + | chr1.1:82243789-82243808 | None:intergenic | 50.0% |
| ! | GCTTTTGAGCTGTTGCGCTT+GGG | + | chr1.1:82243650-82243669 | None:intergenic | 50.0% |
| ! | TGCTTTTGAGCTGTTGCGCT+TGG | + | chr1.1:82243651-82243670 | None:intergenic | 50.0% |
| !! | AAGGGTGGAAGATTTGGTGG+AGG | + | chr1.1:82243875-82243894 | None:intergenic | 50.0% |
| !! | AGTAGGAAGTGTTGGAGTGG+GGG | + | chr1.1:82244000-82244019 | None:intergenic | 50.0% |
| !! | CAGTAGGAAGTGTTGGAGTG+GGG | + | chr1.1:82244001-82244020 | None:intergenic | 50.0% |
| ACTTCTCCCCAGCAAGTACC+GGG | + | chr1.1:82244614-82244633 | None:intergenic | 55.0% | |
| CACTTCTCCCCAGCAAGTAC+CGG | + | chr1.1:82244615-82244634 | None:intergenic | 55.0% | |
| GAGGTGGATAGAGTGGCATG+CGG | + | chr1.1:82243950-82243969 | None:intergenic | 55.0% | |
| GATCCGGATAGTGTGCATGG+AGG | - | chr1.1:82244585-82244604 | MS.gene74257:intron | 55.0% | |
| GGAAAGGGAGGTGGATAGAG+TGG | + | chr1.1:82243957-82243976 | None:intergenic | 55.0% | |
| GGTCGGCTACAAAGTGGATG+AGG | - | chr1.1:82244634-82244653 | MS.gene74257:CDS | 55.0% | |
| TAGTGTGCATGGAGGATGCC+CGG | - | chr1.1:82244593-82244612 | MS.gene74257:intron | 55.0% | |
| ! | ACTTGCTGGGGAGAAGTGGT+CGG | - | chr1.1:82244617-82244636 | MS.gene74257:intron | 55.0% |
| ! | GCGAGTTGGCGTGGAATGTT+TGG | + | chr1.1:82244080-82244099 | None:intergenic | 55.0% |
| !! | GTAGGAAGTGTTGGAGTGGG+GGG | + | chr1.1:82243999-82244018 | None:intergenic | 55.0% |
| !! | TAGGAAGTGTTGGAGTGGGG+GGG | + | chr1.1:82243998-82244017 | None:intergenic | 55.0% |
| GAGGATGCCCGGTACTTGCT+GGG | - | chr1.1:82244604-82244623 | MS.gene74257:intron | 60.0% | |
| TCCACGCCAACTCGCAATGC+AGG | - | chr1.1:82244085-82244104 | MS.gene74257:CDS | 60.0% | |
| ! | AGCTGTTGCGCTTGGGTTGC+TGG | + | chr1.1:82243643-82243662 | None:intergenic | 60.0% |
| ! | AGGATGCCCGGTACTTGCTG+GGG | - | chr1.1:82244605-82244624 | MS.gene74257:intron | 60.0% |
| ! | CGGTACTTGCTGGGGAGAAG+TGG | - | chr1.1:82244613-82244632 | MS.gene74257:intron | 60.0% |
| ! | GATGCTGGCAGGTGCTGTGT+GGG | + | chr1.1:82243746-82243765 | None:intergenic | 60.0% |
| ! | GCTGTTGCGCTTGGGTTGCT+GGG | + | chr1.1:82243642-82243661 | None:intergenic | 60.0% |
| ! | TCCTGCATTGCGAGTTGGCG+TGG | + | chr1.1:82244089-82244108 | None:intergenic | 60.0% |
| GGAGGATGCCCGGTACTTGC+TGG | - | chr1.1:82244603-82244622 | MS.gene74257:intron | 65.0% | |
| ! | CTGGCAGGTGCTGTGTGGGT+TGG | + | chr1.1:82243742-82243761 | None:intergenic | 65.0% |
| ! | GGATGCTGGCAGGTGCTGTG+TGG | + | chr1.1:82243747-82243766 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 82242298 | 82244674 | 82242298 | ID=MS.gene74257 |
| chr1.1 | mRNA | 82242298 | 82244674 | 82242298 | ID=MS.gene74257.t1;Parent=MS.gene74257 |
| chr1.1 | exon | 82244623 | 82244674 | 82244623 | ID=MS.gene74257.t1.exon1;Parent=MS.gene74257.t1 |
| chr1.1 | CDS | 82244623 | 82244674 | 82244623 | ID=cds.MS.gene74257.t1;Parent=MS.gene74257.t1 |
| chr1.1 | exon | 82244055 | 82244530 | 82244055 | ID=MS.gene74257.t1.exon2;Parent=MS.gene74257.t1 |
| chr1.1 | CDS | 82244055 | 82244530 | 82244055 | ID=cds.MS.gene74257.t1;Parent=MS.gene74257.t1 |
| chr1.1 | exon | 82243854 | 82243943 | 82243854 | ID=MS.gene74257.t1.exon3;Parent=MS.gene74257.t1 |
| chr1.1 | CDS | 82243854 | 82243943 | 82243854 | ID=cds.MS.gene74257.t1;Parent=MS.gene74257.t1 |
| chr1.1 | exon | 82242533 | 82242625 | 82242533 | ID=MS.gene74257.t1.exon4;Parent=MS.gene74257.t1 |
| chr1.1 | CDS | 82242533 | 82242625 | 82242533 | ID=cds.MS.gene74257.t1;Parent=MS.gene74257.t1 |
| chr1.1 | exon | 82242298 | 82242405 | 82242298 | ID=MS.gene74257.t1.exon5;Parent=MS.gene74257.t1 |
| chr1.1 | CDS | 82242298 | 82242405 | 82242298 | ID=cds.MS.gene74257.t1;Parent=MS.gene74257.t1 |
| Gene Sequence |
| Protein sequence |
