Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74583.t1 | XP_013449664.1 | 85.5 | 159 | 23 | 0 | 1 | 159 | 1 | 159 | 7.00E-69 | 270 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74583.t1 | Q39255 | 70.7 | 157 | 42 | 1 | 7 | 159 | 4 | 160 | 2.0e-56 | 219.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74583.t1 | A0A072U1W2 | 85.5 | 159 | 23 | 0 | 1 | 159 | 1 | 159 | 5.0e-69 | 270.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene74583 | 0.826716 | 2.33E-54 | -1.69E-46 |
MS.gene049159 | MS.gene74583 | 0.809612 | 1.74E-50 | -1.69E-46 |
MS.gene04918 | MS.gene74583 | 0.804978 | 1.67E-49 | -1.69E-46 |
MS.gene049254 | MS.gene74583 | 0.865828 | 4.45E-65 | -1.69E-46 |
MS.gene049343 | MS.gene74583 | 0.85892 | 5.92E-63 | -1.69E-46 |
MS.gene049404 | MS.gene74583 | 0.800681 | 1.29E-48 | -1.69E-46 |
MS.gene049821 | MS.gene74583 | 0.804859 | 1.76E-49 | -1.69E-46 |
MS.gene049825 | MS.gene74583 | 0.807594 | 4.68E-50 | -1.69E-46 |
MS.gene049850 | MS.gene74583 | 0.829386 | 5.30E-55 | -1.69E-46 |
MS.gene049873 | MS.gene74583 | 0.831844 | 1.33E-55 | -1.69E-46 |
MS.gene049983 | MS.gene74583 | 0.810045 | 1.40E-50 | -1.69E-46 |
MS.gene050026 | MS.gene74583 | 0.81329 | 2.76E-51 | -1.69E-46 |
MS.gene050156 | MS.gene74583 | 0.820841 | 5.54E-53 | -1.69E-46 |
MS.gene050355 | MS.gene74583 | 0.827512 | 1.50E-54 | -1.69E-46 |
MS.gene050759 | MS.gene74583 | 0.805201 | 1.50E-49 | -1.69E-46 |
MS.gene051247 | MS.gene74583 | 0.814526 | 1.47E-51 | -1.69E-46 |
MS.gene051719 | MS.gene74583 | 0.801659 | 8.11E-49 | -1.69E-46 |
MS.gene051744 | MS.gene74583 | 0.819224 | 1.30E-52 | -1.69E-46 |
MS.gene052012 | MS.gene74583 | 0.808504 | 3.00E-50 | -1.69E-46 |
MS.gene052108 | MS.gene74583 | 0.81222 | 4.73E-51 | -1.69E-46 |
MS.gene052519 | MS.gene74583 | 0.860624 | 1.81E-63 | -1.69E-46 |
MS.gene052582 | MS.gene74583 | 0.831017 | 2.12E-55 | -1.69E-46 |
MS.gene052584 | MS.gene74583 | 0.850532 | 1.60E-60 | -1.69E-46 |
MS.gene052773 | MS.gene74583 | 0.824111 | 9.63E-54 | -1.69E-46 |
MS.gene053006 | MS.gene74583 | 0.826278 | 2.96E-54 | -1.69E-46 |
MS.gene053008 | MS.gene74583 | 0.82157 | 3.76E-53 | -1.69E-46 |
MS.gene053122 | MS.gene74583 | 0.802121 | 6.52E-49 | -1.69E-46 |
MS.gene053145 | MS.gene74583 | 0.804091 | 2.55E-49 | -1.69E-46 |
MS.gene053226 | MS.gene74583 | 0.858282 | 9.17E-63 | -1.69E-46 |
MS.gene05364 | MS.gene74583 | 0.809201 | 2.13E-50 | -1.69E-46 |
MS.gene053931 | MS.gene74583 | 0.808017 | 3.81E-50 | -1.69E-46 |
MS.gene05415 | MS.gene74583 | 0.813569 | 2.40E-51 | -1.69E-46 |
MS.gene05423 | MS.gene74583 | 0.805389 | 1.37E-49 | -1.69E-46 |
MS.gene054651 | MS.gene74583 | 0.858553 | 7.61E-63 | -1.69E-46 |
MS.gene054657 | MS.gene74583 | 0.833177 | 6.19E-56 | -1.69E-46 |
MS.gene054775 | MS.gene74583 | 0.820737 | 5.86E-53 | -1.69E-46 |
MS.gene05517 | MS.gene74583 | 0.825271 | 5.13E-54 | -1.69E-46 |
MS.gene055513 | MS.gene74583 | 0.815343 | 9.71E-52 | -1.69E-46 |
MS.gene055586 | MS.gene74583 | 0.805702 | 1.17E-49 | -1.69E-46 |
MS.gene055589 | MS.gene74583 | 0.808841 | 2.54E-50 | -1.69E-46 |
MS.gene055623 | MS.gene74583 | 0.809984 | 1.44E-50 | -1.69E-46 |
MS.gene055818 | MS.gene74583 | 0.846686 | 1.86E-59 | -1.69E-46 |
MS.gene055841 | MS.gene74583 | 0.833898 | 4.09E-56 | -1.69E-46 |
MS.gene056050 | MS.gene74583 | 0.817118 | 3.89E-52 | -1.69E-46 |
MS.gene056162 | MS.gene74583 | 0.80378 | 2.96E-49 | -1.69E-46 |
MS.gene056174 | MS.gene74583 | 0.828236 | 1.01E-54 | -1.69E-46 |
MS.gene056215 | MS.gene74583 | 0.8212 | 4.58E-53 | -1.69E-46 |
MS.gene056366 | MS.gene74583 | 0.826559 | 2.54E-54 | -1.69E-46 |
MS.gene056498 | MS.gene74583 | 0.801607 | 8.31E-49 | -1.69E-46 |
MS.gene056595 | MS.gene74583 | 0.844164 | 8.96E-59 | -1.69E-46 |
MS.gene056699 | MS.gene74583 | 0.815001 | 1.16E-51 | -1.69E-46 |
MS.gene056776 | MS.gene74583 | 0.842968 | 1.87E-58 | -1.69E-46 |
MS.gene05690 | MS.gene74583 | 0.814329 | 1.63E-51 | -1.69E-46 |
MS.gene057034 | MS.gene74583 | 0.811392 | 7.16E-51 | -1.69E-46 |
MS.gene057102 | MS.gene74583 | 0.817986 | 2.48E-52 | -1.69E-46 |
MS.gene057208 | MS.gene74583 | 0.862071 | 6.57E-64 | -1.69E-46 |
MS.gene057444 | MS.gene74583 | 0.832841 | 7.51E-56 | -1.69E-46 |
MS.gene057598 | MS.gene74583 | 0.803094 | 4.11E-49 | -1.69E-46 |
MS.gene057693 | MS.gene74583 | 0.847741 | 9.54E-60 | -1.69E-46 |
MS.gene057855 | MS.gene74583 | 0.813941 | 1.98E-51 | -1.69E-46 |
MS.gene058008 | MS.gene74583 | 0.83399 | 3.88E-56 | -1.69E-46 |
MS.gene058009 | MS.gene74583 | 0.851227 | 1.02E-60 | -1.69E-46 |
MS.gene058037 | MS.gene74583 | 0.815734 | 7.94E-52 | -1.69E-46 |
MS.gene058088 | MS.gene74583 | 0.813558 | 2.41E-51 | -1.69E-46 |
MS.gene05847 | MS.gene74583 | 0.807655 | 4.55E-50 | -1.69E-46 |
MS.gene058548 | MS.gene74583 | 0.825758 | 3.94E-54 | -1.69E-46 |
MS.gene058625 | MS.gene74583 | 0.843085 | 1.74E-58 | -1.69E-46 |
MS.gene058781 | MS.gene74583 | 0.807807 | 4.22E-50 | -1.69E-46 |
MS.gene058783 | MS.gene74583 | 0.851801 | 7.01E-61 | -1.69E-46 |
MS.gene058979 | MS.gene74583 | 0.840669 | 7.56E-58 | -1.69E-46 |
MS.gene059272 | MS.gene74583 | 0.809709 | 1.65E-50 | -1.69E-46 |
MS.gene05954 | MS.gene74583 | 0.823937 | 1.06E-53 | -1.69E-46 |
MS.gene059625 | MS.gene74583 | 0.82515 | 5.48E-54 | -1.69E-46 |
MS.gene05979 | MS.gene74583 | 0.820057 | 8.39E-53 | -1.69E-46 |
MS.gene059842 | MS.gene74583 | 0.836209 | 1.07E-56 | -1.69E-46 |
MS.gene05985 | MS.gene74583 | -0.818537 | 1.86E-52 | -1.69E-46 |
MS.gene059935 | MS.gene74583 | 0.821789 | 3.35E-53 | -1.69E-46 |
MS.gene060322 | MS.gene74583 | 0.824858 | 6.43E-54 | -1.69E-46 |
MS.gene060365 | MS.gene74583 | 0.823684 | 1.21E-53 | -1.69E-46 |
MS.gene060429 | MS.gene74583 | 0.829937 | 3.89E-55 | -1.69E-46 |
MS.gene060521 | MS.gene74583 | 0.811202 | 7.88E-51 | -1.69E-46 |
MS.gene060572 | MS.gene74583 | 0.817064 | 4.00E-52 | -1.69E-46 |
MS.gene060935 | MS.gene74583 | 0.828979 | 6.65E-55 | -1.69E-46 |
MS.gene060937 | MS.gene74583 | 0.811071 | 8.41E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74583.t1 | MTR_7g094120 | 85.535 | 159 | 23 | 0 | 1 | 159 | 1 | 159 | 3.87e-99 | 282 |
MS.gene74583.t1 | MTR_7g021400 | 78.616 | 159 | 31 | 2 | 1 | 159 | 1 | 156 | 1.80e-80 | 235 |
MS.gene74583.t1 | MTR_7g094280 | 72.500 | 160 | 41 | 2 | 1 | 159 | 1 | 158 | 2.14e-79 | 232 |
MS.gene74583.t1 | MTR_7g094150 | 77.987 | 159 | 32 | 2 | 1 | 159 | 1 | 156 | 2.58e-79 | 232 |
MS.gene74583.t1 | MTR_7g094170 | 76.730 | 159 | 34 | 2 | 1 | 159 | 1 | 156 | 1.11e-76 | 225 |
MS.gene74583.t1 | MTR_5g022710 | 76.101 | 159 | 34 | 2 | 1 | 159 | 1 | 155 | 1.38e-76 | 225 |
MS.gene74583.t1 | MTR_3g110048 | 69.811 | 159 | 47 | 1 | 1 | 159 | 1 | 158 | 2.43e-75 | 222 |
MS.gene74583.t1 | MTR_5g022730 | 74.843 | 159 | 36 | 2 | 1 | 159 | 1 | 155 | 2.57e-75 | 222 |
MS.gene74583.t1 | MTR_4g032450 | 68.153 | 157 | 47 | 2 | 4 | 159 | 21 | 175 | 8.77e-74 | 219 |
MS.gene74583.t1 | MTR_7g021380 | 74.843 | 159 | 37 | 2 | 1 | 159 | 1 | 156 | 9.84e-73 | 215 |
MS.gene74583.t1 | MTR_4g032400 | 67.925 | 159 | 48 | 2 | 2 | 159 | 7 | 163 | 1.05e-70 | 210 |
MS.gene74583.t1 | MTR_7g094310 | 67.500 | 160 | 39 | 3 | 1 | 159 | 1 | 148 | 5.72e-70 | 208 |
MS.gene74583.t1 | MTR_8g056060 | 66.875 | 160 | 49 | 3 | 1 | 159 | 1 | 157 | 1.98e-68 | 204 |
MS.gene74583.t1 | MTR_4g032510 | 62.733 | 161 | 50 | 3 | 1 | 159 | 1 | 153 | 3.59e-65 | 196 |
MS.gene74583.t1 | MTR_8g468480 | 64.375 | 160 | 52 | 3 | 1 | 159 | 1 | 156 | 2.63e-64 | 194 |
MS.gene74583.t1 | MTR_4g032500 | 60.625 | 160 | 54 | 2 | 1 | 159 | 1 | 152 | 2.75e-64 | 194 |
MS.gene74583.t1 | MTR_4g032460 | 63.750 | 160 | 47 | 3 | 1 | 159 | 1 | 150 | 6.12e-61 | 185 |
MS.gene74583.t1 | MTR_5g085030 | 59.748 | 159 | 59 | 3 | 1 | 158 | 1 | 155 | 6.14e-60 | 183 |
MS.gene74583.t1 | MTR_4g033455 | 58.599 | 157 | 62 | 2 | 3 | 159 | 7 | 160 | 3.67e-59 | 181 |
MS.gene74583.t1 | MTR_4g017860 | 52.062 | 194 | 52 | 3 | 7 | 159 | 27 | 220 | 2.70e-56 | 176 |
MS.gene74583.t1 | MTR_4g033460 | 58.741 | 143 | 56 | 2 | 3 | 145 | 7 | 146 | 9.65e-53 | 168 |
MS.gene74583.t1 | MTR_4g033460 | 61.053 | 95 | 27 | 2 | 42 | 136 | 161 | 245 | 1.50e-29 | 108 |
MS.gene74583.t1 | MTR_5g082340 | 56.250 | 160 | 54 | 3 | 1 | 159 | 1 | 145 | 1.21e-49 | 156 |
MS.gene74583.t1 | MTR_4g021390 | 54.430 | 158 | 67 | 2 | 2 | 159 | 3 | 155 | 4.26e-49 | 155 |
MS.gene74583.t1 | MTR_1g099870 | 74.038 | 104 | 23 | 2 | 58 | 159 | 2 | 103 | 1.92e-48 | 152 |
MS.gene74583.t1 | MTR_8g089730 | 63.200 | 125 | 27 | 1 | 35 | 159 | 1 | 106 | 1.61e-45 | 145 |
MS.gene74583.t1 | MTR_7g094320 | 50.314 | 159 | 37 | 1 | 1 | 159 | 1 | 117 | 1.15e-44 | 143 |
MS.gene74583.t1 | MTR_4g032420 | 54.264 | 129 | 42 | 3 | 32 | 159 | 38 | 150 | 1.98e-41 | 135 |
MS.gene74583.t1 | MTR_7g094410 | 52.564 | 156 | 35 | 2 | 1 | 117 | 1 | 156 | 2.38e-41 | 136 |
MS.gene74583.t1 | MTR_4g032470 | 47.945 | 146 | 30 | 2 | 15 | 159 | 34 | 134 | 6.81e-38 | 126 |
MS.gene74583.t1 | MTR_4g131980 | 55.072 | 138 | 49 | 5 | 1 | 136 | 1 | 127 | 1.08e-37 | 126 |
MS.gene74583.t1 | MTR_7g094360 | 44.134 | 179 | 48 | 3 | 1 | 128 | 1 | 178 | 5.60e-37 | 126 |
MS.gene74583.t1 | MTR_4g127240 | 61.905 | 105 | 32 | 4 | 41 | 143 | 26 | 124 | 1.77e-34 | 117 |
MS.gene74583.t1 | MTR_7g006370 | 49.306 | 144 | 62 | 3 | 2 | 145 | 3 | 135 | 3.82e-34 | 117 |
MS.gene74583.t1 | MTR_7g094350 | 42.632 | 190 | 54 | 6 | 1 | 138 | 1 | 187 | 1.04e-31 | 112 |
MS.gene74583.t1 | MTR_8g056090 | 47.170 | 159 | 48 | 8 | 1 | 157 | 1 | 125 | 2.99e-29 | 104 |
MS.gene74583.t1 | MTR_4g119422 | 40.268 | 149 | 80 | 2 | 3 | 149 | 227 | 368 | 1.49e-26 | 103 |
MS.gene74583.t1 | MTR_4g032520 | 46.281 | 121 | 38 | 2 | 31 | 150 | 2 | 96 | 1.43e-25 | 95.1 |
MS.gene74583.t1 | MTR_2g066010 | 38.562 | 153 | 80 | 4 | 9 | 158 | 20 | 161 | 2.87e-25 | 96.3 |
MS.gene74583.t1 | MTR_2g065720 | 37.107 | 159 | 86 | 4 | 3 | 158 | 31 | 178 | 1.30e-24 | 94.7 |
MS.gene74583.t1 | MTR_1g112590 | 35.256 | 156 | 81 | 4 | 11 | 149 | 3 | 155 | 6.12e-24 | 91.7 |
MS.gene74583.t1 | MTR_5g096950 | 36.129 | 155 | 84 | 4 | 5 | 158 | 2 | 142 | 1.12e-21 | 85.5 |
MS.gene74583.t1 | MTR_7g071200 | 59.420 | 69 | 27 | 1 | 92 | 159 | 4 | 72 | 1.34e-21 | 83.2 |
MS.gene74583.t1 | MTR_2g018980 | 35.065 | 154 | 83 | 4 | 8 | 159 | 2 | 140 | 1.73e-21 | 85.1 |
MS.gene74583.t1 | MTR_4g032540 | 57.143 | 63 | 26 | 1 | 93 | 154 | 70 | 132 | 1.72e-18 | 77.0 |
MS.gene74583.t1 | MTR_5g078680 | 30.769 | 156 | 68 | 3 | 11 | 149 | 3 | 135 | 3.84e-18 | 79.0 |
MS.gene74583.t1 | MTR_1g112570 | 34.507 | 142 | 67 | 4 | 9 | 131 | 1 | 135 | 4.37e-17 | 76.3 |
MS.gene74583.t1 | MTR_1g042510 | 31.013 | 158 | 69 | 4 | 9 | 149 | 1 | 135 | 1.73e-16 | 74.7 |
MS.gene74583.t1 | MTR_8g007185 | 31.293 | 147 | 86 | 4 | 11 | 150 | 13 | 151 | 5.09e-16 | 73.6 |
MS.gene74583.t1 | MTR_8g007205 | 31.293 | 147 | 86 | 4 | 11 | 150 | 13 | 151 | 8.44e-16 | 72.8 |
MS.gene74583.t1 | MTR_8g007195 | 33.803 | 142 | 80 | 4 | 11 | 146 | 13 | 146 | 1.01e-15 | 73.2 |
MS.gene74583.t1 | MTR_6g053620 | 32.680 | 153 | 89 | 4 | 3 | 149 | 11 | 155 | 4.94e-15 | 71.2 |
MS.gene74583.t1 | MTR_6g053620 | 32.680 | 153 | 89 | 4 | 3 | 149 | 11 | 155 | 6.00e-15 | 71.2 |
MS.gene74583.t1 | MTR_2g100830 | 30.464 | 151 | 89 | 4 | 6 | 149 | 8 | 149 | 1.06e-14 | 70.1 |
MS.gene74583.t1 | MTR_2g100825 | 30.667 | 150 | 91 | 3 | 5 | 149 | 7 | 148 | 1.94e-14 | 69.3 |
MS.gene74583.t1 | MTR_8g030670 | 34.314 | 102 | 60 | 1 | 48 | 149 | 62 | 156 | 1.78e-13 | 67.0 |
MS.gene74583.t1 | MTR_7g077810 | 29.801 | 151 | 90 | 4 | 6 | 149 | 15 | 156 | 3.30e-12 | 63.2 |
MS.gene74583.t1 | MTR_7g036780 | 29.167 | 144 | 88 | 3 | 1 | 138 | 1 | 136 | 9.14e-11 | 58.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene74583.t1 | AT1G20140 | 68.750 | 160 | 45 | 1 | 5 | 159 | 4 | 163 | 1.38e-75 | 223 |
MS.gene74583.t1 | AT2G25700 | 66.875 | 160 | 48 | 1 | 5 | 159 | 4 | 163 | 1.63e-71 | 213 |
MS.gene74583.t1 | AT1G75950 | 69.811 | 159 | 44 | 1 | 5 | 159 | 2 | 160 | 3.36e-71 | 211 |
MS.gene74583.t1 | AT5G42190 | 63.529 | 170 | 48 | 1 | 4 | 159 | 2 | 171 | 1.71e-67 | 202 |
MS.gene74583.t1 | AT4G34210 | 61.935 | 155 | 55 | 1 | 5 | 159 | 2 | 152 | 2.90e-66 | 199 |
MS.gene74583.t1 | AT4G34470 | 60.000 | 155 | 58 | 1 | 5 | 159 | 2 | 152 | 1.72e-63 | 192 |
MS.gene74583.t1 | AT3G60010 | 60.645 | 155 | 56 | 2 | 7 | 159 | 3 | 154 | 1.05e-60 | 185 |
MS.gene74583.t1 | AT2G03190 | 55.556 | 162 | 61 | 2 | 9 | 159 | 6 | 167 | 1.12e-56 | 175 |
MS.gene74583.t1 | AT3G21860 | 57.419 | 155 | 62 | 3 | 5 | 159 | 2 | 152 | 1.73e-56 | 174 |
MS.gene74583.t1 | AT2G03170 | 56.579 | 152 | 57 | 2 | 9 | 159 | 6 | 149 | 1.15e-55 | 172 |
MS.gene74583.t1 | AT3G21850 | 53.846 | 156 | 67 | 2 | 5 | 159 | 2 | 153 | 1.75e-53 | 166 |
MS.gene74583.t1 | AT2G20160 | 53.548 | 155 | 64 | 2 | 5 | 158 | 2 | 149 | 7.75e-51 | 160 |
MS.gene74583.t1 | AT3G25650 | 55.556 | 162 | 61 | 4 | 9 | 159 | 6 | 167 | 3.02e-50 | 159 |
MS.gene74583.t1 | AT2G03160 | 48.705 | 193 | 62 | 5 | 1 | 159 | 1 | 190 | 6.39e-50 | 159 |
MS.gene74583.t1 | AT3G60020 | 50.955 | 157 | 63 | 4 | 9 | 159 | 5 | 153 | 1.70e-48 | 154 |
MS.gene74583.t1 | AT1G10230 | 54.305 | 151 | 68 | 1 | 9 | 158 | 6 | 156 | 5.97e-48 | 152 |
MS.gene74583.t1 | AT3G21830 | 48.387 | 155 | 76 | 1 | 5 | 159 | 2 | 152 | 2.82e-45 | 145 |
MS.gene74583.t1 | AT3G21840 | 49.194 | 124 | 59 | 3 | 5 | 128 | 2 | 121 | 1.82e-30 | 107 |
MS.gene74583.t1 | AT3G53060 | 58.140 | 86 | 27 | 3 | 32 | 116 | 3 | 80 | 6.02e-25 | 92.0 |
MS.gene74583.t1 | AT2G45950 | 31.788 | 151 | 91 | 4 | 4 | 149 | 13 | 156 | 2.90e-15 | 72.0 |
MS.gene74583.t1 | AT2G45950 | 31.788 | 151 | 91 | 4 | 4 | 149 | 13 | 156 | 2.90e-15 | 72.0 |
MS.gene74583.t1 | AT2G45950 | 31.788 | 151 | 91 | 4 | 4 | 149 | 13 | 156 | 3.75e-15 | 71.6 |
MS.gene74583.t1 | AT2G45950 | 31.788 | 151 | 91 | 4 | 4 | 149 | 13 | 156 | 3.75e-15 | 71.6 |
MS.gene74583.t1 | AT2G45950 | 31.788 | 151 | 91 | 4 | 4 | 149 | 13 | 156 | 3.75e-15 | 71.6 |
MS.gene74583.t1 | AT3G61415 | 31.333 | 150 | 89 | 4 | 6 | 149 | 15 | 156 | 9.07e-14 | 67.8 |
MS.gene74583.t1 | AT3G61415 | 31.333 | 150 | 89 | 4 | 6 | 149 | 15 | 156 | 1.12e-13 | 67.4 |
Find 41 sgRNAs with CRISPR-Local
Find 42 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCAGGGTGATCGTCTTCT+TGG | 0.232979 | 2.3:+60336549 | None:intergenic |
CAGAAGATTATCTTAAGAAT+TGG | 0.268289 | 2.3:-60336330 | MS.gene74583:CDS |
TTTCACCGTCGAAACTCTTC+AGG | 0.292899 | 2.3:+60336533 | None:intergenic |
TACCTTCGCTAATACCTTGC+CGG | 0.357004 | 2.3:+60336411 | None:intergenic |
TGCCGGTAACGTTCTGAATC+GGG | 0.375308 | 2.3:+60336428 | None:intergenic |
CATGTCCGCCGCAGCTTGGC+AGG | 0.378684 | 2.3:+60336216 | None:intergenic |
CTGAATCGGGATTGCGTTGT+CGG | 0.392692 | 2.3:+60336441 | None:intergenic |
AGAAGATTATCTTAAGAATT+GGG | 0.396941 | 2.3:-60336329 | MS.gene74583:CDS |
ATCCCGATTCAGAACGTTAC+CGG | 0.408425 | 2.3:-60336430 | MS.gene74583:CDS |
CATCCTTGCTGCAAACTACT+TGG | 0.414458 | 2.3:-60336263 | MS.gene74583:CDS |
CGAACTTCTTCCTCTTCCTC+CGG | 0.424372 | 2.3:+60336133 | None:intergenic |
TTGCCGGTAACGTTCTGAAT+CGG | 0.445008 | 2.3:+60336427 | None:intergenic |
CTTGGATATCAAGAGTCTAC+TGG | 0.463162 | 2.3:-60336245 | MS.gene74583:CDS |
TCATCATGTCCGCCGCAGCT+TGG | 0.472634 | 2.3:+60336212 | None:intergenic |
TGATTTCGTGAAGGTTGATA+AGG | 0.476483 | 2.3:-60336302 | MS.gene74583:CDS |
TGATTACACTCCGGAGGAAG+AGG | 0.478345 | 2.3:-60336143 | MS.gene74583:CDS |
ATTCGAGGTTTCCGAGGCTG+TGG | 0.512799 | 2.3:-60336509 | MS.gene74583:CDS |
CTTCTTGGTTGTTGAAGACA+TGG | 0.520126 | 2.3:+60336564 | None:intergenic |
TGATTCAAGCGCCACAGCCT+CGG | 0.536432 | 2.3:+60336498 | None:intergenic |
AGATAATCTTCTGATTCTGA+AGG | 0.536670 | 2.3:+60336340 | None:intergenic |
TTCACCGTCGAAACTCTTCA+GGG | 0.545848 | 2.3:+60336534 | None:intergenic |
TCTTACCTGCCAAGCTGCGG+CGG | 0.548433 | 2.3:-60336221 | MS.gene74583:CDS |
CATGATGAAAGGAAAGAAAG+TGG | 0.561795 | 2.3:-60336197 | MS.gene74583:CDS |
GGAAGAGGAAGAAGTTCGAA+AGG | 0.564146 | 2.3:-60336128 | MS.gene74583:CDS |
TTTCGACGGTGAAACATTCG+AGG | 0.567957 | 2.3:-60336524 | MS.gene74583:CDS |
AAGTTCGAAAGGAAAACGCA+TGG | 0.586714 | 2.3:-60336117 | MS.gene74583:CDS |
GATTCAGAACGTTACCGGCA+AGG | 0.604913 | 2.3:-60336425 | MS.gene74583:CDS |
ATCACCCTGAAGAGTTTCGA+CGG | 0.611256 | 2.3:-60336538 | MS.gene74583:CDS |
GACAATCAAGCACATGATCG+AGG | 0.614315 | 2.3:-60336473 | MS.gene74583:CDS |
TGAAACATTCGAGGTTTCCG+AGG | 0.617609 | 2.3:-60336515 | MS.gene74583:CDS |
GCTGCGGCGGACATGATGAA+AGG | 0.621251 | 2.3:-60336208 | MS.gene74583:CDS |
TACCGGCAAGGTATTAGCGA+AGG | 0.638623 | 2.3:-60336413 | MS.gene74583:CDS |
AGTTCGAAAGGAAAACGCAT+GGG | 0.640914 | 2.3:-60336116 | MS.gene74583:CDS |
GATGAAAGGAAAGAAAGTGG+AGG | 0.641593 | 2.3:-60336194 | MS.gene74583:CDS |
CTGCAAGAAGCACGTCGAGG+TGG | 0.646155 | 2.3:-60336380 | MS.gene74583:CDS |
TATCCAAGTAGTTTGCAGCA+AGG | 0.660134 | 2.3:+60336260 | None:intergenic |
GGATCTTACCTGCCAAGCTG+CGG | 0.660372 | 2.3:-60336224 | MS.gene74583:CDS |
TTGGGATGCTGATTTCGTGA+AGG | 0.669657 | 2.3:-60336311 | MS.gene74583:CDS |
CAAGAATGATTACACTCCGG+AGG | 0.672447 | 2.3:-60336149 | MS.gene74583:CDS |
CATCAAGAATGATTACACTC+CGG | 0.688170 | 2.3:-60336152 | MS.gene74583:CDS |
ATACTGCAAGAAGCACGTCG+AGG | 0.756219 | 2.3:-60336383 | MS.gene74583:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAGATTATCTTAAGAATT+GGG | - | chr2.3:60336338-60336357 | MS.gene74583:CDS | 20.0% |
! | CAGAAGATTATCTTAAGAAT+TGG | - | chr2.3:60336337-60336356 | MS.gene74583:CDS | 25.0% |
AGATAATCTTCTGATTCTGA+AGG | + | chr2.3:60336330-60336349 | None:intergenic | 30.0% | |
!! | TGATTCTGAAGGTTTTTCAT+CGG | + | chr2.3:60336319-60336338 | None:intergenic | 30.0% |
CATCAAGAATGATTACACTC+CGG | - | chr2.3:60336515-60336534 | MS.gene74583:CDS | 35.0% | |
CATGATGAAAGGAAAGAAAG+TGG | - | chr2.3:60336470-60336489 | MS.gene74583:CDS | 35.0% | |
!! | TGATTTCGTGAAGGTTGATA+AGG | - | chr2.3:60336365-60336384 | MS.gene74583:CDS | 35.0% |
AAGTTCGAAAGGAAAACGCA+TGG | - | chr2.3:60336550-60336569 | MS.gene74583:CDS | 40.0% | |
AGTTCGAAAGGAAAACGCAT+GGG | - | chr2.3:60336551-60336570 | MS.gene74583:CDS | 40.0% | |
CTTGGATATCAAGAGTCTAC+TGG | - | chr2.3:60336422-60336441 | MS.gene74583:CDS | 40.0% | |
GATGAAAGGAAAGAAAGTGG+AGG | - | chr2.3:60336473-60336492 | MS.gene74583:CDS | 40.0% | |
GCAAGGATGAGTTCAAAAAG+TGG | + | chr2.3:60336393-60336412 | None:intergenic | 40.0% | |
! | TATCCAAGTAGTTTGCAGCA+AGG | + | chr2.3:60336410-60336429 | None:intergenic | 40.0% |
ATCACCCTGAAGAGTTTCGA+CGG | - | chr2.3:60336129-60336148 | MS.gene74583:CDS | 45.0% | |
ATCCCGATTCAGAACGTTAC+CGG | - | chr2.3:60336237-60336256 | MS.gene74583:CDS | 45.0% | |
CAAGAATGATTACACTCCGG+AGG | - | chr2.3:60336518-60336537 | MS.gene74583:CDS | 45.0% | |
CATCCTTGCTGCAAACTACT+TGG | - | chr2.3:60336404-60336423 | MS.gene74583:CDS | 45.0% | |
GACAATCAAGCACATGATCG+AGG | - | chr2.3:60336194-60336213 | MS.gene74583:CDS | 45.0% | |
GGAAGAGGAAGAAGTTCGAA+AGG | - | chr2.3:60336539-60336558 | MS.gene74583:CDS | 45.0% | |
TACCTTCGCTAATACCTTGC+CGG | + | chr2.3:60336259-60336278 | None:intergenic | 45.0% | |
TGAAACATTCGAGGTTTCCG+AGG | - | chr2.3:60336152-60336171 | MS.gene74583:CDS | 45.0% | |
TTCACCGTCGAAACTCTTCA+GGG | + | chr2.3:60336136-60336155 | None:intergenic | 45.0% | |
TTTCACCGTCGAAACTCTTC+AGG | + | chr2.3:60336137-60336156 | None:intergenic | 45.0% | |
TTTCGACGGTGAAACATTCG+AGG | - | chr2.3:60336143-60336162 | MS.gene74583:CDS | 45.0% | |
! | TTGCCGGTAACGTTCTGAAT+CGG | + | chr2.3:60336243-60336262 | None:intergenic | 45.0% |
!! | TTGGGATGCTGATTTCGTGA+AGG | - | chr2.3:60336356-60336375 | MS.gene74583:CDS | 45.0% |
CGAACTTCTTCCTCTTCCTC+CGG | + | chr2.3:60336537-60336556 | None:intergenic | 50.0% | |
CTGAATCGGGATTGCGTTGT+CGG | + | chr2.3:60336229-60336248 | None:intergenic | 50.0% | |
CTTCAGGGTGATCGTCTTCT+TGG | + | chr2.3:60336121-60336140 | None:intergenic | 50.0% | |
GATTCAGAACGTTACCGGCA+AGG | - | chr2.3:60336242-60336261 | MS.gene74583:CDS | 50.0% | |
TGATTACACTCCGGAGGAAG+AGG | - | chr2.3:60336524-60336543 | MS.gene74583:CDS | 50.0% | |
! | ATACTGCAAGAAGCACGTCG+AGG | - | chr2.3:60336284-60336303 | MS.gene74583:CDS | 50.0% |
! | TACCGGCAAGGTATTAGCGA+AGG | - | chr2.3:60336254-60336273 | MS.gene74583:CDS | 50.0% |
! | TGCCGGTAACGTTCTGAATC+GGG | + | chr2.3:60336242-60336261 | None:intergenic | 50.0% |
ATTCGAGGTTTCCGAGGCTG+TGG | - | chr2.3:60336158-60336177 | MS.gene74583:CDS | 55.0% | |
GGATCTTACCTGCCAAGCTG+CGG | - | chr2.3:60336443-60336462 | MS.gene74583:CDS | 55.0% | |
TGATTCAAGCGCCACAGCCT+CGG | + | chr2.3:60336172-60336191 | None:intergenic | 55.0% | |
GCTGCGGCGGACATGATGAA+AGG | - | chr2.3:60336459-60336478 | MS.gene74583:CDS | 60.0% | |
TCATCATGTCCGCCGCAGCT+TGG | + | chr2.3:60336458-60336477 | None:intergenic | 60.0% | |
TCTTACCTGCCAAGCTGCGG+CGG | - | chr2.3:60336446-60336465 | MS.gene74583:CDS | 60.0% | |
! | CTGCAAGAAGCACGTCGAGG+TGG | - | chr2.3:60336287-60336306 | MS.gene74583:CDS | 60.0% |
CATGTCCGCCGCAGCTTGGC+AGG | + | chr2.3:60336454-60336473 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 60336105 | 60336584 | 60336105 | ID=MS.gene74583 |
chr2.3 | mRNA | 60336105 | 60336584 | 60336105 | ID=MS.gene74583.t1;Parent=MS.gene74583 |
chr2.3 | exon | 60336105 | 60336584 | 60336105 | ID=MS.gene74583.t1.exon1;Parent=MS.gene74583.t1 |
chr2.3 | CDS | 60336105 | 60336584 | 60336105 | ID=cds.MS.gene74583.t1;Parent=MS.gene74583.t1 |
Gene Sequence |
Protein sequence |