Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74786.t1 | XP_024626190.1 | 95.7 | 539 | 23 | 0 | 1 | 539 | 1 | 539 | 9.00E-286 | 992.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74786.t1 | P77931 | 26.2 | 485 | 280 | 17 | 35 | 496 | 147 | 576 | 3.8e-35 | 151.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74786.t1 | A2Q5S2 | 95.7 | 539 | 23 | 0 | 1 | 539 | 1 | 539 | 6.5e-286 | 992.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene74786 | -0.810199 | 1.30E-50 | -1.69E-46 |
| MS.gene049222 | MS.gene74786 | -0.804937 | 1.70E-49 | -1.69E-46 |
| MS.gene04932 | MS.gene74786 | 0.804523 | 2.07E-49 | -1.69E-46 |
| MS.gene049549 | MS.gene74786 | 0.83814 | 3.43E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene74786 | -0.80427 | 2.34E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene74786 | 0.80455 | 2.05E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene74786 | -0.807588 | 4.70E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene74786 | 0.828713 | 7.72E-55 | -1.69E-46 |
| MS.gene050095 | MS.gene74786 | 0.812289 | 4.57E-51 | -1.69E-46 |
| MS.gene050096 | MS.gene74786 | 0.81186 | 5.67E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene74786 | 0.804853 | 1.77E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene74786 | -0.80124 | 9.89E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene74786 | -0.806901 | 6.57E-50 | -1.69E-46 |
| MS.gene050720 | MS.gene74786 | 0.816422 | 5.58E-52 | -1.69E-46 |
| MS.gene050809 | MS.gene74786 | 0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene05080 | MS.gene74786 | -0.818539 | 1.86E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene74786 | -0.820607 | 6.27E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene74786 | -0.820762 | 5.78E-53 | -1.69E-46 |
| MS.gene051044 | MS.gene74786 | 0.801344 | 9.41E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene74786 | 0.831414 | 1.69E-55 | -1.69E-46 |
| MS.gene051138 | MS.gene74786 | 0.846608 | 1.95E-59 | -1.69E-46 |
| MS.gene051632 | MS.gene74786 | 0.814743 | 1.32E-51 | -1.69E-46 |
| MS.gene052164 | MS.gene74786 | -0.808372 | 3.20E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene74786 | 0.841158 | 5.63E-58 | -1.69E-46 |
| MS.gene05240 | MS.gene74786 | 0.833793 | 4.35E-56 | -1.69E-46 |
| MS.gene05244 | MS.gene74786 | 0.834598 | 2.73E-56 | -1.69E-46 |
| MS.gene052606 | MS.gene74786 | 0.818273 | 2.14E-52 | -1.69E-46 |
| MS.gene052702 | MS.gene74786 | 0.802349 | 5.85E-49 | -1.69E-46 |
| MS.gene053031 | MS.gene74786 | 0.824549 | 7.60E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene74786 | -0.80859 | 2.87E-50 | -1.69E-46 |
| MS.gene053406 | MS.gene74786 | 0.85415 | 1.49E-61 | -1.69E-46 |
| MS.gene053420 | MS.gene74786 | 0.807976 | 3.88E-50 | -1.69E-46 |
| MS.gene053488 | MS.gene74786 | 0.800767 | 1.23E-48 | -1.69E-46 |
| MS.gene053887 | MS.gene74786 | 0.832647 | 8.39E-56 | -1.69E-46 |
| MS.gene054146 | MS.gene74786 | 0.80928 | 2.05E-50 | -1.69E-46 |
| MS.gene054181 | MS.gene74786 | 0.80915 | 2.18E-50 | -1.69E-46 |
| MS.gene054277 | MS.gene74786 | 0.80989 | 1.51E-50 | -1.69E-46 |
| MS.gene054290 | MS.gene74786 | 0.814269 | 1.68E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene74786 | 0.830553 | 2.75E-55 | -1.69E-46 |
| MS.gene05470 | MS.gene74786 | -0.819938 | 8.93E-53 | -1.69E-46 |
| MS.gene054742 | MS.gene74786 | 0.829191 | 5.91E-55 | -1.69E-46 |
| MS.gene05483 | MS.gene74786 | 0.818616 | 1.79E-52 | -1.69E-46 |
| MS.gene054884 | MS.gene74786 | 0.819909 | 9.07E-53 | -1.69E-46 |
| MS.gene055124 | MS.gene74786 | 0.822908 | 1.84E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene74786 | 0.812507 | 4.09E-51 | -1.69E-46 |
| MS.gene055240 | MS.gene74786 | 0.829882 | 4.01E-55 | -1.69E-46 |
| MS.gene055289 | MS.gene74786 | -0.800482 | 1.41E-48 | -1.69E-46 |
| MS.gene055502 | MS.gene74786 | -0.806577 | 7.69E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene74786 | -0.824063 | 9.89E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene74786 | -0.816489 | 5.39E-52 | -1.69E-46 |
| MS.gene056218 | MS.gene74786 | 0.810556 | 1.09E-50 | -1.69E-46 |
| MS.gene056224 | MS.gene74786 | 0.809881 | 1.52E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene74786 | 0.840625 | 7.77E-58 | -1.69E-46 |
| MS.gene056591 | MS.gene74786 | 0.839021 | 2.03E-57 | -1.69E-46 |
| MS.gene056697 | MS.gene74786 | 0.807114 | 5.92E-50 | -1.69E-46 |
| MS.gene056748 | MS.gene74786 | 0.837552 | 4.86E-57 | -1.69E-46 |
| MS.gene056856 | MS.gene74786 | 0.839248 | 1.77E-57 | -1.69E-46 |
| MS.gene056920 | MS.gene74786 | 0.810675 | 1.02E-50 | -1.69E-46 |
| MS.gene057261 | MS.gene74786 | 0.825454 | 4.65E-54 | -1.69E-46 |
| MS.gene057544 | MS.gene74786 | 0.841293 | 5.19E-58 | -1.69E-46 |
| MS.gene057820 | MS.gene74786 | 0.807524 | 4.85E-50 | -1.69E-46 |
| MS.gene058093 | MS.gene74786 | 0.817777 | 2.76E-52 | -1.69E-46 |
| MS.gene058099 | MS.gene74786 | 0.832397 | 9.68E-56 | -1.69E-46 |
| MS.gene058117 | MS.gene74786 | 0.820635 | 6.18E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene74786 | 0.802626 | 5.13E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene74786 | 0.803167 | 3.97E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene74786 | 0.82103 | 5.01E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene74786 | -0.817735 | 2.83E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene74786 | -0.809313 | 2.01E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene74786 | 0.847307 | 1.26E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene74786 | -0.820993 | 5.11E-53 | -1.69E-46 |
| MS.gene059045 | MS.gene74786 | 0.816308 | 5.91E-52 | -1.69E-46 |
| MS.gene059328 | MS.gene74786 | 0.801995 | 6.92E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene74786 | -0.803363 | 3.61E-49 | -1.69E-46 |
| MS.gene059953 | MS.gene74786 | 0.827514 | 1.50E-54 | -1.69E-46 |
| MS.gene059955 | MS.gene74786 | 0.833906 | 4.07E-56 | -1.69E-46 |
| MS.gene060087 | MS.gene74786 | 0.810804 | 9.61E-51 | -1.69E-46 |
| MS.gene060405 | MS.gene74786 | 0.820949 | 5.23E-53 | -1.69E-46 |
| MS.gene060593 | MS.gene74786 | 0.810367 | 1.19E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene74786 | -0.807334 | 5.32E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74786.t1 | MTR_7g009820 | 94.413 | 537 | 30 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1009 |
| MS.gene74786.t1 | MTR_7g009780 | 66.168 | 535 | 165 | 6 | 7 | 539 | 8 | 528 | 0.0 | 696 |
| MS.gene74786.t1 | MTR_7g009760 | 47.510 | 261 | 101 | 5 | 3 | 239 | 4 | 252 | 3.77e-71 | 231 |
| MS.gene74786.t1 | MTR_7g009760 | 43.462 | 260 | 120 | 6 | 300 | 539 | 74 | 326 | 2.18e-51 | 179 |
| MS.gene74786.t1 | MTR_7g009830 | 59.459 | 74 | 29 | 1 | 439 | 511 | 1 | 74 | 1.45e-19 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 124 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAACCCTGATGCTGATTT+TGG | 0.132899 | 7.1:-85771486 | MS.gene74786:CDS |
| CTGAAGAATGTTGCACCTTT+AGG | 0.214252 | 7.1:-85771902 | MS.gene74786:CDS |
| CTGGGTTTGGCAACGGTTAT+TGG | 0.236274 | 7.1:-85770416 | MS.gene74786:CDS |
| TGTACAATGGTGAAATTAAA+TGG | 0.237277 | 7.1:-85771584 | MS.gene74786:CDS |
| AATATTCTGGTGGAGCTATA+TGG | 0.264475 | 7.1:-85771794 | MS.gene74786:CDS |
| TTCCAGTGGCAATGTATATA+TGG | 0.265099 | 7.1:+85771739 | None:intergenic |
| GATCAAATGGTGATTTAGTT+TGG | 0.277647 | 7.1:-85773595 | MS.gene74786:CDS |
| GGACCTATCTATGCAATAAA+TGG | 0.281364 | 7.1:-85770539 | MS.gene74786:CDS |
| TGAAGAATGTTGCACCTTTA+GGG | 0.287178 | 7.1:-85771901 | MS.gene74786:CDS |
| CTAAAGGTGCAACATTCTTC+AGG | 0.312921 | 7.1:+85771903 | None:intergenic |
| ATTAAATGGTACCATCAATT+AGG | 0.316692 | 7.1:-85771570 | MS.gene74786:CDS |
| CCATTAGCAGTAGCATTACT+AGG | 0.327716 | 7.1:+85770614 | None:intergenic |
| TTACCATTTATTGCATAGAT+AGG | 0.335547 | 7.1:+85770536 | None:intergenic |
| ACATCAATTGTGAGCATCAT+TGG | 0.339785 | 7.1:+85771456 | None:intergenic |
| ACGGTTATTGGAGGCCTTAC+TGG | 0.340046 | 7.1:-85770404 | MS.gene74786:CDS |
| AACAATGGTTGCATATATCT+TGG | 0.341143 | 7.1:-85770452 | MS.gene74786:CDS |
| GCTGGACCTGGTGGAATTGC+AGG | 0.341429 | 7.1:-85770803 | MS.gene74786:CDS |
| ACACAGGAAAGGAACAAAAT+TGG | 0.349736 | 7.1:-85773985 | MS.gene74786:CDS |
| AAGAATTTGACAAAATTAAC+TGG | 0.351167 | 7.1:-85773746 | MS.gene74786:CDS |
| TCAAAGCTAGATATTAAATC+TGG | 0.351376 | 7.1:-85771870 | MS.gene74786:CDS |
| ATGCTCACAATTGATGTAAA+TGG | 0.353186 | 7.1:-85771450 | MS.gene74786:CDS |
| GCTAATGGCATTGTCTTTGC+AGG | 0.354990 | 7.1:-85770578 | MS.gene74786:CDS |
| GCTAGTGTTGTCACTATGTC+TGG | 0.358082 | 7.1:-85773548 | MS.gene74786:CDS |
| AAATTGATGGAACTCTTGTT+TGG | 0.366671 | 7.1:-85773772 | MS.gene74786:CDS |
| TTTCTTGATGCATCAATTGA+TGG | 0.366714 | 7.1:+85771762 | None:intergenic |
| ATGTTAATTGGACAGTATCT+AGG | 0.370333 | 7.1:-85773697 | MS.gene74786:CDS |
| TCCGGTCGTTGTTGTCTTGT+TGG | 0.370598 | 7.1:+85770691 | None:intergenic |
| CTTGTGATTGTGGGAATATA+TGG | 0.371220 | 7.1:-85773644 | MS.gene74786:CDS |
| AATTAGGTGGATATGATGTT+TGG | 0.379146 | 7.1:-85771554 | MS.gene74786:CDS |
| AACATGTTAGTGAGAATAAT+AGG | 0.382891 | 7.1:+85774726 | None:intergenic |
| CCTAGTAATGCTACTGCTAA+TGG | 0.386146 | 7.1:-85770614 | MS.gene74786:CDS |
| GGCAAAAGAGGTGAATATTC+TGG | 0.389528 | 7.1:-85771807 | MS.gene74786:CDS |
| TTGCACAGGGCATATTATAT+CGG | 0.390954 | 7.1:-85771954 | MS.gene74786:intron |
| TTAGGTCCAGGAGGACAATT+AGG | 0.391186 | 7.1:+85771504 | None:intergenic |
| ATGCCATTAGCTACACTAAC+AGG | 0.393915 | 7.1:+85770590 | None:intergenic |
| TTTAGTTTGGCAAACTCGTT+TGG | 0.394403 | 7.1:-85773582 | MS.gene74786:CDS |
| CAAGTAGTGGCAAGATCTTA+TGG | 0.397359 | 7.1:-85770649 | MS.gene74786:CDS |
| ATTGTTCCATTGAAAATTGC+TGG | 0.403439 | 7.1:+85773836 | None:intergenic |
| GATAGGTCCTTTCTTATTTG+CGG | 0.406800 | 7.1:+85770553 | None:intergenic |
| CTTGGAAATGGTTATACTCT+GGG | 0.411208 | 7.1:-85770434 | MS.gene74786:CDS |
| ATATTCTGGTGGAGCTATAT+GGG | 0.413118 | 7.1:-85771793 | MS.gene74786:CDS |
| AAATGGTTATACTCTGGGTT+TGG | 0.413220 | 7.1:-85770429 | MS.gene74786:CDS |
| GGTTGCATATATCTTGGAAA+TGG | 0.416429 | 7.1:-85770446 | MS.gene74786:CDS |
| GTCACAATGGCGACATCATT+TGG | 0.416873 | 7.1:-85771368 | MS.gene74786:CDS |
| CATCATATCCACCTAATTGA+TGG | 0.425001 | 7.1:+85771559 | None:intergenic |
| GCTTCTCCAAAATCAGCATC+AGG | 0.427656 | 7.1:+85771480 | None:intergenic |
| CCAAAATCAGCATCAGGGTT+AGG | 0.434986 | 7.1:+85771486 | None:intergenic |
| GAGACTGGAGCAACTGTATA+TGG | 0.437029 | 7.1:-85770488 | MS.gene74786:CDS |
| TCTGGTTCAACACATTGATC+AGG | 0.439239 | 7.1:+85771639 | None:intergenic |
| GACAACAACGACCGGAGGTT+GGG | 0.452196 | 7.1:-85770684 | MS.gene74786:CDS |
| ATAGTTTACTTAAACACAAA+AGG | 0.454120 | 7.1:+85770364 | None:intergenic |
| TTAACTGGTCTAGATTCAAC+AGG | 0.456781 | 7.1:-85773731 | MS.gene74786:CDS |
| TCTTGGAAATGGTTATACTC+TGG | 0.463329 | 7.1:-85770435 | MS.gene74786:CDS |
| TTTGCAGTGAGAGAAATTGA+TGG | 0.473787 | 7.1:-85773785 | MS.gene74786:CDS |
| ATTGTTATCAGGTAACATAT+AGG | 0.480668 | 7.1:+85771830 | None:intergenic |
| GTCGTTGTTGTCTTGTTGGA+TGG | 0.481353 | 7.1:+85770695 | None:intergenic |
| TCAACACCTAATTGTCCTCC+TGG | 0.489198 | 7.1:-85771510 | MS.gene74786:CDS |
| TAAAGGTGCAACATTCTTCA+GGG | 0.493183 | 7.1:+85771904 | None:intergenic |
| TCCTCATCAACTGCTATAGT+TGG | 0.493919 | 7.1:+85773668 | None:intergenic |
| CCTGATAACAATGGCAAAAG+AGG | 0.493988 | 7.1:-85771819 | MS.gene74786:CDS |
| GGTTTGGCAACGGTTATTGG+AGG | 0.496155 | 7.1:-85770413 | MS.gene74786:CDS |
| TATGCAATAAATGGTAAGAC+TGG | 0.496304 | 7.1:-85770530 | MS.gene74786:CDS |
| GGTCCTGTTAGTGTAGCTAA+TGG | 0.500128 | 7.1:-85770593 | MS.gene74786:CDS |
| TTCCATTGCTACCCAACCTC+CGG | 0.505492 | 7.1:+85770673 | None:intergenic |
| GAATTGCAGGAGGTGGAACA+TGG | 0.511710 | 7.1:-85770790 | MS.gene74786:CDS |
| ACACATTGATCAGGTTGAGT+TGG | 0.517315 | 7.1:+85771648 | None:intergenic |
| GACCGGAGGTTGGGTAGCAA+TGG | 0.522325 | 7.1:-85770675 | MS.gene74786:CDS |
| AGACAACAACGACCGGAGGT+TGG | 0.527268 | 7.1:-85770685 | MS.gene74786:CDS |
| TAGCAACTTAACTTTGAAGT+GGG | 0.531914 | 7.1:-85773891 | MS.gene74786:CDS |
| CCACCTCCTGCAATTCCACC+AGG | 0.536641 | 7.1:+85770797 | None:intergenic |
| AAAGAGAAGTACCACCAGTA+AGG | 0.537523 | 7.1:+85770390 | None:intergenic |
| TGTCTGGGACTTATTACAAA+GGG | 0.538033 | 7.1:-85773532 | MS.gene74786:intron |
| TTATACTCTGGGTTTGGCAA+CGG | 0.538064 | 7.1:-85770423 | MS.gene74786:CDS |
| TCCAACAAGACAACAACGAC+CGG | 0.539301 | 7.1:-85770692 | MS.gene74786:CDS |
| GAGCATAGAAACAAGAAAGC+AGG | 0.541084 | 7.1:+85774748 | None:intergenic |
| TTAGCACTTGATTTGTACAA+TGG | 0.543019 | 7.1:-85771597 | MS.gene74786:CDS |
| TTCACAGCAATAACAACAGC+TGG | 0.544047 | 7.1:+85773620 | None:intergenic |
| TCAGCATCAGGGTTAGGTCC+AGG | 0.546165 | 7.1:+85771492 | None:intergenic |
| TTGAAGTGGGAATTCAATGC+AGG | 0.547207 | 7.1:-85773878 | MS.gene74786:CDS |
| TGTTAATTGGACAGTATCTA+GGG | 0.549483 | 7.1:-85773696 | MS.gene74786:CDS |
| CCTGGTGGAATTGCAGGAGG+TGG | 0.549486 | 7.1:-85770797 | MS.gene74786:CDS |
| AACCATATATACATTGCCAC+TGG | 0.550879 | 7.1:-85771741 | MS.gene74786:CDS |
| TGATGAGGATCTTGTGATTG+TGG | 0.553619 | 7.1:-85773654 | MS.gene74786:CDS |
| ATTGCTGTGAATAGATCAAA+TGG | 0.554033 | 7.1:-85773608 | MS.gene74786:CDS |
| TTAGCAACTTAACTTTGAAG+TGG | 0.555369 | 7.1:-85773892 | MS.gene74786:CDS |
| GCAGGATCCGCAAATAAGAA+AGG | 0.555993 | 7.1:-85770560 | MS.gene74786:CDS |
| GATGAGGATCTTGTGATTGT+GGG | 0.560321 | 7.1:-85773653 | MS.gene74786:CDS |
| TGACATTGACGTATGTGTAA+AGG | 0.562222 | 7.1:+85771702 | None:intergenic |
| TGGCGACATCATTTGGTCTA+CGG | 0.562799 | 7.1:-85771361 | MS.gene74786:intron |
| AGCATTACTAGGGTTAGCTA+TGG | 0.562879 | 7.1:+85770625 | None:intergenic |
| GTTGAGTGATTTCAGTACAC+AGG | 0.568978 | 7.1:-85774001 | MS.gene74786:intron |
| CATTAGCAGTAGCATTACTA+GGG | 0.573942 | 7.1:+85770615 | None:intergenic |
| GAAGAATGTTGCACCTTTAG+GGG | 0.574154 | 7.1:-85771900 | MS.gene74786:CDS |
| AATTGCAGGAGGTGGAACAT+GGG | 0.577922 | 7.1:-85770789 | MS.gene74786:CDS |
| TGTTGTATATGTCTCCACCA+TGG | 0.580257 | 7.1:+85773957 | None:intergenic |
| GGTGGTATTTCAATTAACAA+TGG | 0.583317 | 7.1:-85770467 | MS.gene74786:CDS |
| AATATGAAACCATTCCATGA+AGG | 0.584635 | 7.1:+85773806 | None:intergenic |
| CAACAGAAGATATGCAAGCA+AGG | 0.590464 | 7.1:-85773939 | MS.gene74786:CDS |
| ATTGCAGGAGGTGGAACATG+GGG | 0.597976 | 7.1:-85770788 | MS.gene74786:CDS |
| TTGACAAATCATTACAAGCA+AGG | 0.600049 | 7.1:+85771529 | None:intergenic |
| AAATGGTACCATCAATTAGG+TGG | 0.606186 | 7.1:-85771567 | MS.gene74786:CDS |
| CTAGTGTTGTCACTATGTCT+GGG | 0.609175 | 7.1:-85773547 | MS.gene74786:CDS |
| TATTTGCTCGACTGTTGCCA+TGG | 0.614352 | 7.1:+85774772 | None:intergenic |
| GTGATTTCAGTACACAGGAA+AGG | 0.618603 | 7.1:-85773996 | MS.gene74786:intron |
| TGGGCTTTGCACCGTCACAA+TGG | 0.619336 | 7.1:-85771381 | MS.gene74786:CDS |
| ACACATACGTCAATGTCAAG+AGG | 0.619899 | 7.1:-85771697 | MS.gene74786:CDS |
| TTTAAGGAAGCTGGACCTGG+TGG | 0.626935 | 7.1:-85770812 | MS.gene74786:intron |
| GTTGTTGCTGTACAAAAGAG+TGG | 0.628248 | 7.1:-85771411 | MS.gene74786:CDS |
| ACCAACTATAGCAGTTGATG+AGG | 0.629081 | 7.1:-85773669 | MS.gene74786:CDS |
| GAACAAAATTGGTTAAACCA+TGG | 0.637342 | 7.1:-85773974 | MS.gene74786:CDS |
| CAAAATTGGTTAAACCATGG+TGG | 0.639237 | 7.1:-85773971 | MS.gene74786:CDS |
| ATGTCTGGGACTTATTACAA+AGG | 0.640168 | 7.1:-85773533 | MS.gene74786:CDS |
| TATTCTGGTGGAGCTATATG+GGG | 0.659541 | 7.1:-85771792 | MS.gene74786:CDS |
| CTTCTCCAAAATCAGCATCA+GGG | 0.663016 | 7.1:+85771481 | None:intergenic |
| GGACCTGGTGGAATTGCAGG+AGG | 0.666186 | 7.1:-85770800 | MS.gene74786:CDS |
| GTAGCAATGGAAGCAAGTAG+TGG | 0.670681 | 7.1:-85770662 | MS.gene74786:CDS |
| AAATGATGTCGCCATTGTGA+CGG | 0.678248 | 7.1:+85771370 | None:intergenic |
| AACAAGACAACAACGACCGG+AGG | 0.684320 | 7.1:-85770689 | MS.gene74786:CDS |
| GTTATTGGAGGCCTTACTGG+TGG | 0.687764 | 7.1:-85770401 | MS.gene74786:CDS |
| AGCTGAGTACAAATTTCCAG+TGG | 0.694688 | 7.1:+85771725 | None:intergenic |
| GCATCAGGGTTAGGTCCAGG+AGG | 0.710561 | 7.1:+85771495 | None:intergenic |
| AAAAGAGGTGAATATTCTGG+TGG | 0.712735 | 7.1:-85771804 | MS.gene74786:CDS |
| TATATGTTACCTGATAACAA+TGG | 0.716707 | 7.1:-85771828 | MS.gene74786:CDS |
| ACTGGAGCAACTGTATATGG+TGG | 0.776690 | 7.1:-85770485 | MS.gene74786:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAACTATGTAT+AGG | + | chr7.1:85772041-85772060 | None:intergenic | 10.0% |
| !!! | ATTATATTGATAATATAATG+CGG | + | chr7.1:85772219-85772238 | None:intergenic | 10.0% |
| !!! | ATTTTTAGAAACTTAAAATA+AGG | + | chr7.1:85772410-85772429 | None:intergenic | 10.0% |
| !!! | CTATTTTGATTTTTTTTAAT+AGG | - | chr7.1:85774135-85774154 | MS.gene74786:intron | 10.0% |
| !!! | TTCATTTACATATTTTTTTA+AGG | - | chr7.1:85774315-85774334 | MS.gene74786:intron | 10.0% |
| !! | ATTTAAATTGTACACTAATA+CGG | - | chr7.1:85771001-85771020 | MS.gene74786:intron | 15.0% |
| !! | GACTTCAAATAAAAAATAAA+AGG | + | chr7.1:85772649-85772668 | None:intergenic | 15.0% |
| !! | TATTAATGTAAAGTCTAATT+TGG | - | chr7.1:85774165-85774184 | MS.gene74786:intron | 15.0% |
| !! | TTCACTTAATATTATCATTT+CGG | - | chr7.1:85771652-85771671 | MS.gene74786:CDS | 15.0% |
| !!! | AAAGATGTTTTTATTTTTGA+AGG | + | chr7.1:85774097-85774116 | None:intergenic | 15.0% |
| !!! | AGTGAAACAATTATTTTTAT+AGG | - | chr7.1:85771744-85771763 | MS.gene74786:CDS | 15.0% |
| !!! | TATTTTCATAAACTATACAT+GGG | - | chr7.1:85770634-85770653 | MS.gene74786:CDS | 15.0% |
| !!! | TTATGATATTGAACAATTTT+TGG | - | chr7.1:85772951-85772970 | MS.gene74786:intron | 15.0% |
| !!! | TTTAGCAATACAATTTTTTA+TGG | + | chr7.1:85774291-85774310 | None:intergenic | 15.0% |
| !! | AAACCAAAATAATAGAAGTT+AGG | + | chr7.1:85771926-85771945 | None:intergenic | 20.0% |
| !! | AAGAATTTGACAAAATTAAC+TGG | - | chr7.1:85771397-85771416 | MS.gene74786:CDS | 20.0% |
| !! | ACTTATGATTTATTTGAACT+CGG | + | chr7.1:85771727-85771746 | None:intergenic | 20.0% |
| !! | ATAAAAATATCAATTGCACA+GGG | - | chr7.1:85773176-85773195 | MS.gene74786:intron | 20.0% |
| !! | ATGATAATATTAAGTGAAGA+AGG | + | chr7.1:85771650-85771669 | None:intergenic | 20.0% |
| !! | GAAAATGTTAAATATTGCAA+TGG | + | chr7.1:85772627-85772646 | None:intergenic | 20.0% |
| !! | GAAATAATTCGTTACTATAA+TGG | + | chr7.1:85773839-85773858 | None:intergenic | 20.0% |
| !! | TATAAAAATATCAATTGCAC+AGG | - | chr7.1:85773175-85773194 | MS.gene74786:intron | 20.0% |
| !! | TTGTTTGTTCTCAATATTAA+TGG | - | chr7.1:85773138-85773157 | MS.gene74786:intron | 20.0% |
| !! | TTTATTTGATCATGTATGTA+TGG | + | chr7.1:85772125-85772144 | None:intergenic | 20.0% |
| !!! | AAAATAAGTCTTGTGTAATT+TGG | + | chr7.1:85771867-85771886 | None:intergenic | 20.0% |
| !!! | AAACATCTTTTAAACCTAAT+AGG | - | chr7.1:85774107-85774126 | MS.gene74786:intron | 20.0% |
| !!! | AAATAAGTCTTGTGTAATTT+GGG | + | chr7.1:85771866-85771885 | None:intergenic | 20.0% |
| !!! | ATAGACTTGACTTTTTTTTT+TGG | - | chr7.1:85772715-85772734 | MS.gene74786:intron | 20.0% |
| !!! | ATGTTTTTATTTTTGAAGGA+AGG | + | chr7.1:85774093-85774112 | None:intergenic | 20.0% |
| !!! | ATTGAATTAGAATGATTTTC+TGG | + | chr7.1:85773525-85773544 | None:intergenic | 20.0% |
| !!! | ATTTTTTAAACAATATGCAC+CGG | - | chr7.1:85772870-85772889 | MS.gene74786:intron | 20.0% |
| !!! | CTATTTTCATAAACTATACA+TGG | - | chr7.1:85770633-85770652 | MS.gene74786:CDS | 20.0% |
| !!! | GAAACAATTATTTTTATAGG+AGG | - | chr7.1:85771747-85771766 | MS.gene74786:CDS | 20.0% |
| !!! | GATCTCTAAACAAAATTTTT+AGG | - | chr7.1:85772248-85772267 | MS.gene74786:intron | 20.0% |
| !!! | TCAATACTTATTTTAGTTGT+AGG | + | chr7.1:85774202-85774221 | None:intergenic | 20.0% |
| !!! | TCATTAATTTTTTCTCTCTT+CGG | + | chr7.1:85770976-85770995 | None:intergenic | 20.0% |
| !!! | TGATTTGTAAAATTGTTTCT+GGG | + | chr7.1:85773050-85773069 | None:intergenic | 20.0% |
| !!! | TGTCATTGTCTTTTTTTATA+AGG | - | chr7.1:85772451-85772470 | MS.gene74786:intron | 20.0% |
| !!! | TTAAGTTGCTAATTGTTTTA+AGG | + | chr7.1:85771243-85771262 | None:intergenic | 20.0% |
| !!! | TTGATTTGTAAAATTGTTTC+TGG | + | chr7.1:85773051-85773070 | None:intergenic | 20.0% |
| !!! | TTTTAATTGACTTTTTTGTG+TGG | + | chr7.1:85772554-85772573 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGGTTGAATGT+TGG | - | chr7.1:85772726-85772745 | MS.gene74786:intron | 20.0% |
| ! | AAAGTCTAGATGTAATTAAC+TGG | + | chr7.1:85771995-85772014 | None:intergenic | 25.0% |
| ! | AACATGTTAGTGAGAATAAT+AGG | + | chr7.1:85770420-85770439 | None:intergenic | 25.0% |
| ! | AATCATCTGAATCATGAATA+AGG | + | chr7.1:85771789-85771808 | None:intergenic | 25.0% |
| ! | AATTGAAACTCACAAACAAA+AGG | + | chr7.1:85772593-85772612 | None:intergenic | 25.0% |
| ! | ATTAAATGGTACCATCAATT+AGG | - | chr7.1:85773573-85773592 | MS.gene74786:CDS | 25.0% |
| ! | ATTGAGAACAAACAAGATTT+AGG | + | chr7.1:85773133-85773152 | None:intergenic | 25.0% |
| ! | ATTGTTATCAGGTAACATAT+AGG | + | chr7.1:85773316-85773335 | None:intergenic | 25.0% |
| ! | CATGATATATAAAGCATGTT+TGG | + | chr7.1:85770734-85770753 | None:intergenic | 25.0% |
| ! | GTCGAATTAAACCTTAAAAA+AGG | - | chr7.1:85772099-85772118 | MS.gene74786:intron | 25.0% |
| ! | TATATGTTACCTGATAACAA+TGG | - | chr7.1:85773315-85773334 | MS.gene74786:intron | 25.0% |
| ! | TCAAAATAGTTTGACCTATT+AGG | + | chr7.1:85774124-85774143 | None:intergenic | 25.0% |
| ! | TCAAAGCTAGATATTAAATC+TGG | - | chr7.1:85773273-85773292 | MS.gene74786:intron | 25.0% |
| ! | TCTAGACTTTACAAAACTTA+AGG | - | chr7.1:85772005-85772024 | MS.gene74786:intron | 25.0% |
| ! | TGTACAATGGTGAAATTAAA+TGG | - | chr7.1:85773559-85773578 | MS.gene74786:CDS | 25.0% |
| ! | TTACCATTTATTGCATAGAT+AGG | + | chr7.1:85774610-85774629 | None:intergenic | 25.0% |
| ! | TTGAGAACAAACAAGATTTA+GGG | + | chr7.1:85773132-85773151 | None:intergenic | 25.0% |
| ! | TTTAGACATGCTTGATATTT+AGG | + | chr7.1:85770825-85770844 | None:intergenic | 25.0% |
| ! | TTTGATCTGCTAAAAAATGA+AGG | + | chr7.1:85773105-85773124 | None:intergenic | 25.0% |
| !! | ATATATTTTCCTTCATGGAA+TGG | - | chr7.1:85771328-85771347 | MS.gene74786:intron | 25.0% |
| !! | ATTGATAATATAATGCGGTT+AGG | + | chr7.1:85772214-85772233 | None:intergenic | 25.0% |
| !! | ATTTGGGTTCAATATAAGTT+AGG | + | chr7.1:85771850-85771869 | None:intergenic | 25.0% |
| !! | CATATAGGTTTTCCATAAAA+TGG | + | chr7.1:85773301-85773320 | None:intergenic | 25.0% |
| !! | GAACAATATATTTTCCTTCA+TGG | - | chr7.1:85771323-85771342 | MS.gene74786:intron | 25.0% |
| !! | TTGATAATATAATGCGGTTA+GGG | + | chr7.1:85772213-85772232 | None:intergenic | 25.0% |
| !! | TTTATGCCTTTTGTGTTTAA+TGG | - | chr7.1:85774773-85774792 | MS.gene74786:CDS | 25.0% |
| !! | TTTGAAGTCAACTAAATTGT+CGG | - | chr7.1:85772660-85772679 | MS.gene74786:intron | 25.0% |
| !!! | AAATTTTGTTTAGAGATCAC+TGG | + | chr7.1:85772246-85772265 | None:intergenic | 25.0% |
| !!! | AAGACTTATTTTATGCTCAA+TGG | - | chr7.1:85771875-85771894 | MS.gene74786:CDS | 25.0% |
| !!! | ACATATTTTTTTAAGGAAGC+TGG | - | chr7.1:85774322-85774341 | MS.gene74786:intron | 25.0% |
| !!! | ACTTATTTTAGTTGTAGGAA+TGG | + | chr7.1:85774197-85774216 | None:intergenic | 25.0% |
| !!! | ATGATTTTTTGTGGTTTAGA+GGG | - | chr7.1:85772980-85772999 | MS.gene74786:intron | 25.0% |
| !!! | CTTATTTTAGTTGTAGGAAT+GGG | + | chr7.1:85774196-85774215 | None:intergenic | 25.0% |
| !!! | GATATTGTTTTATTCAAGCT+AGG | + | chr7.1:85770524-85770543 | None:intergenic | 25.0% |
| !!! | TATGATTTTTTGTGGTTTAG+AGG | - | chr7.1:85772979-85772998 | MS.gene74786:intron | 25.0% |
| !!! | TCTATTTCTATGAGAAATTG+TGG | - | chr7.1:85770498-85770517 | MS.gene74786:CDS | 25.0% |
| !!! | TGATTTTGTGATTGATTTAG+AGG | - | chr7.1:85773922-85773941 | MS.gene74786:CDS | 25.0% |
| !!! | TGGTCTTATATGATTTTTTG+TGG | - | chr7.1:85772971-85772990 | MS.gene74786:intron | 25.0% |
| AAATTGATGGAACTCTTGTT+TGG | - | chr7.1:85771371-85771390 | MS.gene74786:CDS | 30.0% | |
| AACAATGGTTGCATATATCT+TGG | - | chr7.1:85774691-85774710 | MS.gene74786:intron | 30.0% | |
| AATATGAAACCATTCCATGA+AGG | + | chr7.1:85771340-85771359 | None:intergenic | 30.0% | |
| AATTAGGTGGATATGATGTT+TGG | - | chr7.1:85773589-85773608 | MS.gene74786:CDS | 30.0% | |
| ACATGACAACTTTAGTTGTA+TGG | + | chr7.1:85773077-85773096 | None:intergenic | 30.0% | |
| ATGCTCACAATTGATGTAAA+TGG | - | chr7.1:85773693-85773712 | MS.gene74786:CDS | 30.0% | |
| ATGTTAATTGGACAGTATCT+AGG | - | chr7.1:85771446-85771465 | MS.gene74786:CDS | 30.0% | |
| ATTATCATTTCGGATTAACG+TGG | - | chr7.1:85771662-85771681 | MS.gene74786:CDS | 30.0% | |
| ATTGCTGTGAATAGATCAAA+TGG | - | chr7.1:85771535-85771554 | MS.gene74786:CDS | 30.0% | |
| ATTGTTCCATTGAAAATTGC+TGG | + | chr7.1:85771310-85771329 | None:intergenic | 30.0% | |
| CAAGATCTAATGAGATAGAT+TGG | - | chr7.1:85772510-85772529 | MS.gene74786:intron | 30.0% | |
| CTCGATCATACATGTAATTA+GGG | + | chr7.1:85772769-85772788 | None:intergenic | 30.0% | |
| CTTAAAATAAGGCAAGTGAT+TGG | + | chr7.1:85772399-85772418 | None:intergenic | 30.0% | |
| GAACAAAATTGGTTAAACCA+TGG | - | chr7.1:85771169-85771188 | MS.gene74786:intron | 30.0% | |
| GATCAAATGGTGATTTAGTT+TGG | - | chr7.1:85771548-85771567 | MS.gene74786:CDS | 30.0% | |
| GCAAGTGATTGGATATATTT+GGG | + | chr7.1:85772388-85772407 | None:intergenic | 30.0% | |
| GGTGGTATTTCAATTAACAA+TGG | - | chr7.1:85774676-85774695 | MS.gene74786:intron | 30.0% | |
| GTAAGCACTTCTAATATTGT+GGG | + | chr7.1:85770683-85770702 | None:intergenic | 30.0% | |
| TAACACGAGCATATTGTATT+CGG | + | chr7.1:85770929-85770948 | None:intergenic | 30.0% | |
| TATGCAATAAATGGTAAGAC+TGG | - | chr7.1:85774613-85774632 | MS.gene74786:intron | 30.0% | |
| TGATAATATAATGCGGTTAG+GGG | + | chr7.1:85772212-85772231 | None:intergenic | 30.0% | |
| TGTTAATTGGACAGTATCTA+GGG | - | chr7.1:85771447-85771466 | MS.gene74786:CDS | 30.0% | |
| TTGACAAATCATTACAAGCA+AGG | + | chr7.1:85773617-85773636 | None:intergenic | 30.0% | |
| TTTCTTGATGCATCAATTGA+TGG | + | chr7.1:85773384-85773403 | None:intergenic | 30.0% | |
| ! | AGAAGTATAAGCTTACATCA+GGG | + | chr7.1:85770450-85770469 | None:intergenic | 30.0% |
| ! | GCATGTCTAAATTTTTCTTC+TGG | - | chr7.1:85770834-85770853 | MS.gene74786:intron | 30.0% |
| ! | TAGAAGTATAAGCTTACATC+AGG | + | chr7.1:85770451-85770470 | None:intergenic | 30.0% |
| ! | TATTTGGGTCTTGAATGTTT+TGG | + | chr7.1:85772373-85772392 | None:intergenic | 30.0% |
| ! | TCAATATCCACAAAAGTATG+CGG | - | chr7.1:85771900-85771919 | MS.gene74786:CDS | 30.0% |
| ! | TCTCATTAGATCTTGATGAT+TGG | + | chr7.1:85772505-85772524 | None:intergenic | 30.0% |
| ! | TTAGCAACTTAACTTTGAAG+TGG | - | chr7.1:85771251-85771270 | MS.gene74786:intron | 30.0% |
| !! | ACTGGATTTTGATAGAAGTT+AGG | + | chr7.1:85771977-85771996 | None:intergenic | 30.0% |
| !! | GTTTTGTTGCGAATGTTAAT+TGG | - | chr7.1:85771434-85771453 | MS.gene74786:CDS | 30.0% |
| !! | TAGCAACTTAACTTTGAAGT+GGG | - | chr7.1:85771252-85771271 | MS.gene74786:intron | 30.0% |
| !! | TTAGCACTTGATTTGTACAA+TGG | - | chr7.1:85773546-85773565 | MS.gene74786:CDS | 30.0% |
| !!! | GACTTTTTTGTGTGGTTATA+CGG | + | chr7.1:85772546-85772565 | None:intergenic | 30.0% |
| !!! | TGTATGTATGGCCTTTTTTA+AGG | + | chr7.1:85772113-85772132 | None:intergenic | 30.0% |
| !!! | TTAAATCTGGTGCCATTTTA+TGG | - | chr7.1:85773286-85773305 | MS.gene74786:intron | 30.0% |
| AAAAGAGGTGAATATTCTGG+TGG | - | chr7.1:85773339-85773358 | MS.gene74786:intron | 35.0% | |
| AAATGGTACCATCAATTAGG+TGG | - | chr7.1:85773576-85773595 | MS.gene74786:CDS | 35.0% | |
| AAATGGTTATACTCTGGGTT+TGG | - | chr7.1:85774714-85774733 | MS.gene74786:CDS | 35.0% | |
| AACCATATATACATTGCCAC+TGG | - | chr7.1:85773402-85773421 | MS.gene74786:intron | 35.0% | |
| AATATTCTGGTGGAGCTATA+TGG | - | chr7.1:85773349-85773368 | MS.gene74786:intron | 35.0% | |
| ACACAGGAAAGGAACAAAAT+TGG | - | chr7.1:85771158-85771177 | MS.gene74786:intron | 35.0% | |
| ACATCAATTGTGAGCATCAT+TGG | + | chr7.1:85773690-85773709 | None:intergenic | 35.0% | |
| ATATTCTGGTGGAGCTATAT+GGG | - | chr7.1:85773350-85773369 | MS.gene74786:intron | 35.0% | |
| ATTACATGTATGATCGAGGA+AGG | - | chr7.1:85772771-85772790 | MS.gene74786:intron | 35.0% | |
| CAAAATTGGTTAAACCATGG+TGG | - | chr7.1:85771172-85771191 | MS.gene74786:intron | 35.0% | |
| CAAACTCAAACCAACCTATT+TGG | + | chr7.1:85772327-85772346 | None:intergenic | 35.0% | |
| CATCATATCCACCTAATTGA+TGG | + | chr7.1:85773587-85773606 | None:intergenic | 35.0% | |
| CATTAGCAGTAGCATTACTA+GGG | + | chr7.1:85774531-85774550 | None:intergenic | 35.0% | |
| CCTAATTACATGTATGATCG+AGG | - | chr7.1:85772767-85772786 | MS.gene74786:intron | 35.0% | |
| CCTCGATCATACATGTAATT+AGG | + | chr7.1:85772770-85772789 | None:intergenic | 35.0% | |
| CGTAAGCACTTCTAATATTG+TGG | + | chr7.1:85770684-85770703 | None:intergenic | 35.0% | |
| CTTGGAAATGGTTATACTCT+GGG | - | chr7.1:85774709-85774728 | MS.gene74786:intron | 35.0% | |
| CTTGTGATTGTGGGAATATA+TGG | - | chr7.1:85771499-85771518 | MS.gene74786:CDS | 35.0% | |
| GACATGCTTGATATTTAGGT+AGG | + | chr7.1:85770821-85770840 | None:intergenic | 35.0% | |
| GGACCTATCTATGCAATAAA+TGG | - | chr7.1:85774604-85774623 | MS.gene74786:intron | 35.0% | |
| GGCAAGTGATTGGATATATT+TGG | + | chr7.1:85772389-85772408 | None:intergenic | 35.0% | |
| GGTTGCATATATCTTGGAAA+TGG | - | chr7.1:85774697-85774716 | MS.gene74786:intron | 35.0% | |
| GTTAGGGGTGAAAATAAGTT+AGG | + | chr7.1:85772197-85772216 | None:intergenic | 35.0% | |
| TCTTGGAAATGGTTATACTC+TGG | - | chr7.1:85774708-85774727 | MS.gene74786:intron | 35.0% | |
| TGAAGAATGTTGCACCTTTA+GGG | - | chr7.1:85773242-85773261 | MS.gene74786:intron | 35.0% | |
| TGACAAGCAAACTTATGTGT+AGG | - | chr7.1:85772069-85772088 | MS.gene74786:intron | 35.0% | |
| TGACATTGACGTATGTGTAA+AGG | + | chr7.1:85773444-85773463 | None:intergenic | 35.0% | |
| TGACGTCAAAATTTGTGTCA+AGG | - | chr7.1:85771028-85771047 | MS.gene74786:intron | 35.0% | |
| TTCCAGTGGCAATGTATATA+TGG | + | chr7.1:85773407-85773426 | None:intergenic | 35.0% | |
| TTGCACAGGGCATATTATAT+CGG | - | chr7.1:85773189-85773208 | MS.gene74786:intron | 35.0% | |
| TTGTTGACATCTTGCACATA+GGG | - | chr7.1:85772301-85772320 | MS.gene74786:intron | 35.0% | |
| TTTCAATCTCTACAGCAGTT+CGG | - | chr7.1:85773855-85773874 | MS.gene74786:CDS | 35.0% | |
| TTTGCAGTGAGAGAAATTGA+TGG | - | chr7.1:85771358-85771377 | MS.gene74786:intron | 35.0% | |
| TTTGTTGACATCTTGCACAT+AGG | - | chr7.1:85772300-85772319 | MS.gene74786:intron | 35.0% | |
| ! | ATGTCTGGGACTTATTACAA+AGG | - | chr7.1:85771610-85771629 | MS.gene74786:CDS | 35.0% |
| ! | CGGCCTAACTTCTATTATTT+TGG | - | chr7.1:85771920-85771939 | MS.gene74786:CDS | 35.0% |
| ! | CTTTGAAAAACTTCCCCTAA+AGG | + | chr7.1:85773259-85773278 | None:intergenic | 35.0% |
| ! | GATAGGTCCTTTCTTATTTG+CGG | + | chr7.1:85774593-85774612 | None:intergenic | 35.0% |
| ! | GGATGATGATGATTGGAAAA+AGG | + | chr7.1:85770955-85770974 | None:intergenic | 35.0% |
| ! | GTAAGACTGGTGAAATTTTG+TGG | - | chr7.1:85774626-85774645 | MS.gene74786:intron | 35.0% |
| ! | TAAAGGTGCAACATTCTTCA+GGG | + | chr7.1:85773242-85773261 | None:intergenic | 35.0% |
| ! | TGTCTGGGACTTATTACAAA+GGG | - | chr7.1:85771611-85771630 | MS.gene74786:CDS | 35.0% |
| ! | TTAACTGGTCTAGATTCAAC+AGG | - | chr7.1:85771412-85771431 | MS.gene74786:CDS | 35.0% |
| !! | ACAAAAGAGTGGTTTTGCTT+GGG | - | chr7.1:85773743-85773762 | MS.gene74786:CDS | 35.0% |
| !! | CAGCAGTTCGGTTTTATAAT+TGG | - | chr7.1:85773867-85773886 | MS.gene74786:CDS | 35.0% |
| !! | GCATACTTCTGTTGATGATT+TGG | + | chr7.1:85771825-85771844 | None:intergenic | 35.0% |
| !! | TACAAAAGAGTGGTTTTGCT+TGG | - | chr7.1:85773742-85773761 | MS.gene74786:CDS | 35.0% |
| !! | TGTAAAATTGTTTCTGGGAC+AGG | + | chr7.1:85773045-85773064 | None:intergenic | 35.0% |
| !! | TTTAGTTTGGCAAACTCGTT+TGG | - | chr7.1:85771561-85771580 | MS.gene74786:CDS | 35.0% |
| !! | TTTTAGTTGTAGGAATGGGT+TGG | + | chr7.1:85774192-85774211 | None:intergenic | 35.0% |
| !!! | ATTTTGTGGTCTTATGAGAC+TGG | - | chr7.1:85774640-85774659 | MS.gene74786:intron | 35.0% |
| !!! | TTTTTTGGTTGAATGTTGGC+TGG | - | chr7.1:85772730-85772749 | MS.gene74786:intron | 35.0% |
| AAATGATGTCGCCATTGTGA+CGG | + | chr7.1:85773776-85773795 | None:intergenic | 40.0% | |
| ACACATACGTCAATGTCAAG+AGG | - | chr7.1:85773446-85773465 | MS.gene74786:intron | 40.0% | |
| ACTTAATCAACCCGTTGTTG+TGG | + | chr7.1:85773971-85773990 | None:intergenic | 40.0% | |
| AGACAGAACAGAACAACACA+AGG | - | chr7.1:85772906-85772925 | MS.gene74786:intron | 40.0% | |
| AGCTGAGTACAAATTTCCAG+TGG | + | chr7.1:85773421-85773440 | None:intergenic | 40.0% | |
| ATGCCATTAGCTACACTAAC+AGG | + | chr7.1:85774556-85774575 | None:intergenic | 40.0% | |
| CAACAGAAGATATGCAAGCA+AGG | - | chr7.1:85771204-85771223 | MS.gene74786:intron | 40.0% | |
| CAAGTAGTGGCAAGATCTTA+TGG | - | chr7.1:85774494-85774513 | MS.gene74786:intron | 40.0% | |
| CCATTAGCAGTAGCATTACT+AGG | + | chr7.1:85774532-85774551 | None:intergenic | 40.0% | |
| CCTAGTAATGCTACTGCTAA+TGG | - | chr7.1:85774529-85774548 | MS.gene74786:intron | 40.0% | |
| CCTGATAACAATGGCAAAAG+AGG | - | chr7.1:85773324-85773343 | MS.gene74786:intron | 40.0% | |
| CTAGTGTTGTCACTATGTCT+GGG | - | chr7.1:85771596-85771615 | MS.gene74786:CDS | 40.0% | |
| CTGAAGAATGTTGCACCTTT+AGG | - | chr7.1:85773241-85773260 | MS.gene74786:intron | 40.0% | |
| CTTCTCCAAAATCAGCATCA+GGG | + | chr7.1:85773665-85773684 | None:intergenic | 40.0% | |
| GAAGAATGTTGCACCTTTAG+GGG | - | chr7.1:85773243-85773262 | MS.gene74786:intron | 40.0% | |
| GAGCATAGAAACAAGAAAGC+AGG | + | chr7.1:85770398-85770417 | None:intergenic | 40.0% | |
| GATGAGGATCTTGTGATTGT+GGG | - | chr7.1:85771490-85771509 | MS.gene74786:CDS | 40.0% | |
| GGCAAAAGAGGTGAATATTC+TGG | - | chr7.1:85773336-85773355 | MS.gene74786:intron | 40.0% | |
| GGGACAAAAATTTCTGTGTC+AGG | - | chr7.1:85773000-85773019 | MS.gene74786:intron | 40.0% | |
| GTGATTTCAGTACACAGGAA+AGG | - | chr7.1:85771147-85771166 | MS.gene74786:intron | 40.0% | |
| GTTGAGTGATTTCAGTACAC+AGG | - | chr7.1:85771142-85771161 | MS.gene74786:intron | 40.0% | |
| GTTGTTGCTGTACAAAAGAG+TGG | - | chr7.1:85773732-85773751 | MS.gene74786:CDS | 40.0% | |
| TATTCTGGTGGAGCTATATG+GGG | - | chr7.1:85773351-85773370 | MS.gene74786:intron | 40.0% | |
| TCCTCATCAACTGCTATAGT+TGG | + | chr7.1:85771478-85771497 | None:intergenic | 40.0% | |
| TGATGAGGATCTTGTGATTG+TGG | - | chr7.1:85771489-85771508 | MS.gene74786:CDS | 40.0% | |
| TGTTGTATATGTCTCCACCA+TGG | + | chr7.1:85771189-85771208 | None:intergenic | 40.0% | |
| TTATACTCTGGGTTTGGCAA+CGG | - | chr7.1:85774720-85774739 | MS.gene74786:CDS | 40.0% | |
| TTCACAGCAATAACAACAGC+TGG | + | chr7.1:85771526-85771545 | None:intergenic | 40.0% | |
| TTGAAGTGGGAATTCAATGC+AGG | - | chr7.1:85771265-85771284 | MS.gene74786:intron | 40.0% | |
| ! | ACCAACTATAGCAGTTGATG+AGG | - | chr7.1:85771474-85771493 | MS.gene74786:CDS | 40.0% |
| ! | CCTCTTTTGCCATTGTTATC+AGG | + | chr7.1:85773327-85773346 | None:intergenic | 40.0% |
| ! | CTAAAGGTGCAACATTCTTC+AGG | + | chr7.1:85773243-85773262 | None:intergenic | 40.0% |
| ! | GCAACACCAGCAATTTTCAA+TGG | - | chr7.1:85771301-85771320 | MS.gene74786:intron | 40.0% |
| ! | TCTCTTCGGATGATGATGAT+TGG | + | chr7.1:85770962-85770981 | None:intergenic | 40.0% |
| ! | TCTGGTTCAACACATTGATC+AGG | + | chr7.1:85773507-85773526 | None:intergenic | 40.0% |
| ! | TGTCGCGACATTTTGCAAAT+TGG | + | chr7.1:85773948-85773967 | None:intergenic | 40.0% |
| !! | AAAGAGAAGTACCACCAGTA+AGG | + | chr7.1:85774756-85774775 | None:intergenic | 40.0% |
| !! | ACACATTGATCAGGTTGAGT+TGG | + | chr7.1:85773498-85773517 | None:intergenic | 40.0% |
| !! | AGCATTACTAGGGTTAGCTA+TGG | + | chr7.1:85774521-85774540 | None:intergenic | 40.0% |
| !!! | CTGTCTAGTGTTGTTTTGTC+CGG | + | chr7.1:85772892-85772911 | None:intergenic | 40.0% |
| !!! | TTTTTTAAGGAAGCTGGACC+TGG | - | chr7.1:85774328-85774347 | MS.gene74786:intron | 40.0% |
| ACAGGATAAACTCGAGGCAA+GGG | + | chr7.1:85773027-85773046 | None:intergenic | 45.0% | |
| ACTGGAGCAACTGTATATGG+TGG | - | chr7.1:85774658-85774677 | MS.gene74786:intron | 45.0% | |
| CCAAAATCAGCATCAGGGTT+AGG | + | chr7.1:85773660-85773679 | None:intergenic | 45.0% | |
| GAGACTGGAGCAACTGTATA+TGG | - | chr7.1:85774655-85774674 | MS.gene74786:intron | 45.0% | |
| GCAGGATCCGCAAATAAGAA+AGG | - | chr7.1:85774583-85774602 | MS.gene74786:intron | 45.0% | |
| GCTAATGGCATTGTCTTTGC+AGG | - | chr7.1:85774565-85774584 | MS.gene74786:intron | 45.0% | |
| GCTAGTGTTGTCACTATGTC+TGG | - | chr7.1:85771595-85771614 | MS.gene74786:CDS | 45.0% | |
| GCTTCTCCAAAATCAGCATC+AGG | + | chr7.1:85773666-85773685 | None:intergenic | 45.0% | |
| GGTCCTGTTAGTGTAGCTAA+TGG | - | chr7.1:85774550-85774569 | MS.gene74786:intron | 45.0% | |
| GTAGCAATGGAAGCAAGTAG+TGG | - | chr7.1:85774481-85774500 | MS.gene74786:intron | 45.0% | |
| GTCACAATGGCGACATCATT+TGG | - | chr7.1:85773775-85773794 | MS.gene74786:CDS | 45.0% | |
| TCAACACCTAATTGTCCTCC+TGG | - | chr7.1:85773633-85773652 | MS.gene74786:CDS | 45.0% | |
| TCCAACAAGACAACAACGAC+CGG | - | chr7.1:85774451-85774470 | MS.gene74786:intron | 45.0% | |
| TCTTGCACATAGGGCCAAAT+AGG | - | chr7.1:85772310-85772329 | MS.gene74786:intron | 45.0% | |
| TGGCGACATCATTTGGTCTA+CGG | - | chr7.1:85773782-85773801 | MS.gene74786:CDS | 45.0% | |
| TTAGGTCCAGGAGGACAATT+AGG | + | chr7.1:85773642-85773661 | None:intergenic | 45.0% | |
| ! | AGTTAGGCCGCATACTTTTG+TGG | + | chr7.1:85771910-85771929 | None:intergenic | 45.0% |
| ! | GTCGTTGTTGTCTTGTTGGA+TGG | + | chr7.1:85774451-85774470 | None:intergenic | 45.0% |
| ! | TTGGTTGAATGTTGGCTGGT+TGG | - | chr7.1:85772734-85772753 | MS.gene74786:intron | 45.0% |
| !!! | CCTAACCCTGATGCTGATTT+TGG | - | chr7.1:85773657-85773676 | MS.gene74786:CDS | 45.0% |
| !!! | AATAATGTAAAATTTTTATA+TGG | - | chr7.1:85771066-85771085 | MS.gene74786:intron | 5.0% |
| !!! | ATAATGTAAAATTTTTATAT+GGG | - | chr7.1:85771067-85771086 | MS.gene74786:intron | 5.0% |
| AACAAGACAACAACGACCGG+AGG | - | chr7.1:85774454-85774473 | MS.gene74786:intron | 50.0% | |
| ACGGTTATTGGAGGCCTTAC+TGG | - | chr7.1:85774739-85774758 | MS.gene74786:CDS | 50.0% | |
| ATGTCGCGACACCACAACAA+CGG | - | chr7.1:85773957-85773976 | MS.gene74786:CDS | 50.0% | |
| CTGGGTTTGGCAACGGTTAT+TGG | - | chr7.1:85774727-85774746 | MS.gene74786:CDS | 50.0% | |
| GACAGGATAAACTCGAGGCA+AGG | + | chr7.1:85773028-85773047 | None:intergenic | 50.0% | |
| GCACATAGGGCCAAATAGGT+TGG | - | chr7.1:85772314-85772333 | MS.gene74786:intron | 50.0% | |
| GGTTTGGCAACGGTTATTGG+AGG | - | chr7.1:85774730-85774749 | MS.gene74786:CDS | 50.0% | |
| GTTATTGGAGGCCTTACTGG+TGG | - | chr7.1:85774742-85774761 | MS.gene74786:CDS | 50.0% | |
| TCCGGTCGTTGTTGTCTTGT+TGG | + | chr7.1:85774455-85774474 | None:intergenic | 50.0% | |
| TTCCATTGCTACCCAACCTC+CGG | + | chr7.1:85774473-85774492 | None:intergenic | 50.0% | |
| TTTAAGGAAGCTGGACCTGG+TGG | - | chr7.1:85774331-85774350 | MS.gene74786:intron | 50.0% | |
| ! | TCTGGGACAGGATAAACTCG+AGG | + | chr7.1:85773033-85773052 | None:intergenic | 50.0% |
| AGACAACAACGACCGGAGGT+TGG | - | chr7.1:85774458-85774477 | MS.gene74786:intron | 55.0% | |
| GACAACAACGACCGGAGGTT+GGG | - | chr7.1:85774459-85774478 | MS.gene74786:intron | 55.0% | |
| TCAGCATCAGGGTTAGGTCC+AGG | + | chr7.1:85773654-85773673 | None:intergenic | 55.0% | |
| TGGGCTTTGCACCGTCACAA+TGG | - | chr7.1:85773762-85773781 | MS.gene74786:CDS | 55.0% | |
| TGTCGCGACACCACAACAAC+GGG | - | chr7.1:85773958-85773977 | MS.gene74786:CDS | 55.0% | |
| CCACCTCCTGCAATTCCACC+AGG | + | chr7.1:85774349-85774368 | None:intergenic | 60.0% | |
| CCTGGTGGAATTGCAGGAGG+TGG | - | chr7.1:85774346-85774365 | MS.gene74786:intron | 60.0% | |
| GACCGGAGGTTGGGTAGCAA+TGG | - | chr7.1:85774468-85774487 | MS.gene74786:intron | 60.0% | |
| GCATCAGGGTTAGGTCCAGG+AGG | + | chr7.1:85773651-85773670 | None:intergenic | 60.0% | |
| GCTGGACCTGGTGGAATTGC+AGG | - | chr7.1:85774340-85774359 | MS.gene74786:intron | 60.0% | |
| GGACCTGGTGGAATTGCAGG+AGG | - | chr7.1:85774343-85774362 | MS.gene74786:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 85770373 | 85774792 | 85770373 | ID=MS.gene74786 |
| chr7.1 | mRNA | 85770373 | 85774792 | 85770373 | ID=MS.gene74786.t1;Parent=MS.gene74786 |
| chr7.1 | exon | 85774712 | 85774792 | 85774712 | ID=MS.gene74786.t1.exon1;Parent=MS.gene74786.t1 |
| chr7.1 | CDS | 85774712 | 85774792 | 85774712 | ID=cds.MS.gene74786.t1;Parent=MS.gene74786.t1 |
| chr7.1 | exon | 85773533 | 85774008 | 85773533 | ID=MS.gene74786.t1.exon2;Parent=MS.gene74786.t1 |
| chr7.1 | CDS | 85773533 | 85774008 | 85773533 | ID=cds.MS.gene74786.t1;Parent=MS.gene74786.t1 |
| chr7.1 | exon | 85771362 | 85771968 | 85771362 | ID=MS.gene74786.t1.exon3;Parent=MS.gene74786.t1 |
| chr7.1 | CDS | 85771362 | 85771968 | 85771362 | ID=cds.MS.gene74786.t1;Parent=MS.gene74786.t1 |
| chr7.1 | exon | 85770373 | 85770828 | 85770373 | ID=MS.gene74786.t1.exon4;Parent=MS.gene74786.t1 |
| chr7.1 | CDS | 85770373 | 85770828 | 85770373 | ID=cds.MS.gene74786.t1;Parent=MS.gene74786.t1 |
| Gene Sequence |
| Protein sequence |
