AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76557


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76557.t1 MTR_2g100620 98.023 354 7 0 1 354 1 354 0.0 712
MS.gene76557.t1 MTR_8g014910 77.054 353 81 0 1 353 2 354 0.0 573
MS.gene76557.t1 MTR_2g084585 59.884 344 137 1 10 353 9 351 3.86e-151 429
MS.gene76557.t1 MTR_4g056280 52.770 343 161 1 11 353 10 351 6.54e-131 379
MS.gene76557.t1 MTR_4g056160 52.439 328 154 2 28 353 24 351 1.97e-121 354
MS.gene76557.t1 MTR_5g084750 45.283 318 173 1 29 346 28 344 1.76e-99 298
MS.gene76557.t1 MTR_3g082830 44.892 323 177 1 29 351 36 357 1.07e-98 296
MS.gene76557.t1 MTR_5g084790 42.812 320 182 1 29 348 30 348 2.11e-96 290
MS.gene76557.t1 MTR_3g464730 42.210 353 194 5 1 350 2 347 1.42e-94 286
MS.gene76557.t1 MTR_1g025780 42.105 342 193 4 9 348 17 355 8.85e-94 284
MS.gene76557.t1 MTR_5g084770 40.597 335 193 3 23 354 20 351 1.13e-92 281
MS.gene76557.t1 MTR_5g074270 44.127 315 171 4 31 342 33 345 9.92e-90 274
MS.gene76557.t1 MTR_5g022630 40.922 347 199 4 9 350 18 363 5.62e-88 269
MS.gene76557.t1 MTR_8g075230 40.491 326 193 1 25 350 30 354 9.48e-86 263
MS.gene76557.t1 MTR_1g025760 38.012 342 207 4 9 348 58 396 1.67e-84 261
MS.gene76557.t1 MTR_2g015080 38.710 341 197 6 7 337 14 352 1.81e-83 258
MS.gene76557.t1 MTR_4g087985 38.973 331 185 5 31 346 36 364 1.83e-83 258
MS.gene76557.t1 MTR_1g025700 38.663 344 209 2 5 348 24 365 4.42e-83 257
MS.gene76557.t1 MTR_8g075200 38.941 321 195 1 30 350 40 359 8.22e-83 257
MS.gene76557.t1 MTR_5g022640 37.861 346 210 3 9 350 18 362 4.73e-82 254
MS.gene76557.t1 MTR_1108s0010 53.636 220 90 2 134 353 3 210 6.11e-82 249
MS.gene76557.t1 MTR_8g075220 38.226 327 196 3 30 351 39 364 2.90e-81 252
MS.gene76557.t1 MTR_3g114090 38.820 322 194 3 30 350 35 354 3.84e-80 249
MS.gene76557.t1 MTR_1g025720 39.365 315 185 4 30 342 36 346 4.92e-80 249
MS.gene76557.t1 MTR_3g114120 39.628 323 193 2 26 348 42 362 2.80e-79 247
MS.gene76557.t1 MTR_1g025680 39.564 321 191 3 29 348 32 350 3.74e-79 249
MS.gene76557.t1 MTR_1g025910 39.423 312 183 5 36 345 41 348 3.27e-70 224
MS.gene76557.t1 MTR_1g069175 39.172 314 178 6 31 337 33 340 3.30e-69 221
MS.gene76557.t1 MTR_5g083040 36.036 333 195 6 29 350 30 355 6.89e-68 218
MS.gene76557.t1 MTR_6g021530 35.673 342 211 8 10 346 7 344 1.30e-63 207
MS.gene76557.t1 MTR_7g116570 35.671 328 202 7 23 346 26 348 2.96e-63 206
MS.gene76557.t1 MTR_0565s0010 36.522 345 203 10 3 342 9 342 6.04e-63 205
MS.gene76557.t1 MTR_7g116510 34.473 351 216 7 1 347 1 341 6.68e-63 204
MS.gene76557.t1 MTR_7g116500 34.940 332 198 9 26 346 23 347 8.41e-63 204
MS.gene76557.t1 MTR_8g079050 34.891 321 199 6 35 347 41 359 1.30e-62 204
MS.gene76557.t1 MTR_7g116520 35.938 320 196 7 31 346 34 348 2.32e-62 204
MS.gene76557.t1 MTR_8g087890 36.070 341 202 8 9 342 9 340 7.46e-62 202
MS.gene76557.t1 MTR_1g079540 35.220 318 199 6 31 345 31 344 1.02e-61 202
MS.gene76557.t1 MTR_4g019880 34.188 351 217 10 2 346 6 348 1.48e-60 199
MS.gene76557.t1 MTR_1g024890 35.119 336 206 8 15 346 19 346 1.51e-60 199
MS.gene76557.t1 MTR_2g033920 34.675 323 203 6 29 347 33 351 1.68e-60 199
MS.gene76557.t1 MTR_1g079530 35.976 328 193 8 31 353 29 344 2.42e-59 195
MS.gene76557.t1 MTR_3g024510 34.706 340 208 9 10 342 15 347 2.94e-58 193
MS.gene76557.t1 MTR_4g122200 33.807 352 206 9 9 349 18 353 2.46e-57 190
MS.gene76557.t1 MTR_5g009100 32.692 312 203 6 34 342 49 356 7.01e-57 189
MS.gene76557.t1 MTR_3g052490 34.473 351 210 11 5 345 7 347 7.71e-57 189
MS.gene76557.t1 MTR_4g036375 53.293 167 78 0 12 178 11 177 3.55e-55 179
MS.gene76557.t1 MTR_7g008060 33.043 345 204 9 9 346 10 334 3.60e-55 184
MS.gene76557.t1 MTR_3g052580 32.764 351 218 10 3 345 2 342 3.46e-54 183
MS.gene76557.t1 MTR_5g093090 31.624 351 211 10 10 347 11 345 5.80e-54 181
MS.gene76557.t1 MTR_3g052580 32.764 351 218 10 3 345 1 341 7.24e-54 182
MS.gene76557.t1 MTR_5g078210 34.713 314 192 8 35 343 29 334 9.93e-54 181
MS.gene76557.t1 MTR_3g005650 33.531 337 207 9 10 342 12 335 1.39e-53 180
MS.gene76557.t1 MTR_2g044100 34.242 330 206 6 31 354 43 367 9.54e-53 179
MS.gene76557.t1 MTR_8g074570 31.054 351 231 4 9 353 16 361 2.07e-52 177
MS.gene76557.t1 MTR_3g052480 33.239 352 214 12 5 345 8 349 9.26e-52 176
MS.gene76557.t1 MTR_3g005660 34.154 325 198 9 29 344 34 351 1.63e-51 175
MS.gene76557.t1 MTR_2g033930 30.938 320 215 5 30 347 31 346 1.32e-49 170
MS.gene76557.t1 MTR_4g108690 34.483 319 198 9 35 348 31 343 2.45e-49 169
MS.gene76557.t1 MTR_3g435540 34.796 319 197 9 35 348 27 339 4.97e-49 169
MS.gene76557.t1 MTR_4g035353 31.975 319 206 8 29 342 29 341 2.52e-48 167
MS.gene76557.t1 MTR_8g031420 30.226 354 226 10 9 354 13 353 2.80e-48 167
MS.gene76557.t1 MTR_8g022810 31.447 318 206 7 31 342 41 352 3.21e-48 167
MS.gene76557.t1 MTR_3g098270 32.075 318 206 6 31 342 34 347 1.34e-47 166
MS.gene76557.t1 MTR_2g017875 34.056 323 191 10 27 342 30 337 3.26e-47 164
MS.gene76557.t1 MTR_8g074580 29.114 395 222 8 9 353 22 408 1.22e-46 164
MS.gene76557.t1 MTR_2g033920 35.714 266 164 5 29 290 33 295 1.75e-46 160
MS.gene76557.t1 MTR_6g049230 57.724 123 51 1 205 327 73 194 3.07e-46 156
MS.gene76557.t1 MTR_8g031430 30.435 368 220 13 7 354 4 355 3.91e-46 161
MS.gene76557.t1 MTR_8g022790 31.250 320 201 8 31 345 37 342 9.20e-46 160
MS.gene76557.t1 MTR_8g031390 28.997 369 223 11 7 354 4 354 1.19e-45 160
MS.gene76557.t1 MTR_8g087870 32.464 345 213 9 3 343 1 329 1.32e-45 159
MS.gene76557.t1 MTR_0009s0250 34.125 337 195 14 22 350 24 341 1.28e-44 157
MS.gene76557.t1 MTR_1g030268 33.918 342 186 12 30 345 39 366 1.09e-43 155
MS.gene76557.t1 MTR_3g021460 31.831 355 203 12 3 343 1 330 2.99e-43 153
MS.gene76557.t1 MTR_8g074560 31.124 347 218 13 12 345 11 349 1.11e-42 152
MS.gene76557.t1 MTR_4g036385 54.839 124 55 1 230 353 13 135 2.26e-42 144
MS.gene76557.t1 MTR_2g017925 33.542 319 190 11 29 342 31 332 3.00e-42 151
MS.gene76557.t1 MTR_4g056220 52.713 129 60 1 225 353 61 188 4.83e-42 145
MS.gene76557.t1 MTR_3g023220 33.019 318 191 10 29 342 31 330 5.04e-42 150
MS.gene76557.t1 MTR_2g017965 32.184 348 203 14 10 342 8 337 6.10e-42 150
MS.gene76557.t1 MTR_8g031400 28.743 334 213 10 31 354 37 355 1.18e-41 149
MS.gene76557.t1 MTR_2g017955 32.326 331 204 10 29 353 31 347 2.57e-41 149
MS.gene76557.t1 MTR_1g030275 32.286 350 197 12 23 346 31 366 3.42e-40 146
MS.gene76557.t1 MTR_5g093090 32.180 289 179 8 10 290 11 290 1.19e-39 142
MS.gene76557.t1 MTR_5g078210 33.716 261 163 7 35 290 29 284 5.18e-39 141
MS.gene76557.t1 MTR_8g031390 29.936 314 184 10 7 302 4 299 1.22e-38 140
MS.gene76557.t1 MTR_2g461580 30.675 326 195 10 27 343 27 330 4.33e-38 139
MS.gene76557.t1 MTR_5g074210 46.154 143 74 3 204 345 64 204 2.18e-37 134
MS.gene76557.t1 MTR_1g030220 31.045 335 197 10 31 341 40 364 2.45e-37 138
MS.gene76557.t1 MTR_2g017915 31.579 323 184 9 29 347 31 320 2.58e-37 137
MS.gene76557.t1 MTR_7g087190 29.714 350 208 11 30 351 42 381 3.83e-36 135
MS.gene76557.t1 MTR_1g079590 39.888 178 101 4 31 204 31 206 6.42e-36 130
MS.gene76557.t1 MTR_1g030230 30.117 342 201 12 30 345 31 360 4.78e-35 132
MS.gene76557.t1 MTR_1g030340 31.507 365 208 14 9 345 21 371 6.29e-35 132
MS.gene76557.t1 MTR_5g087690 28.406 345 196 13 22 344 41 356 6.73e-35 131
MS.gene76557.t1 MTR_6g049220 39.106 179 64 1 26 204 25 158 7.98e-34 123
MS.gene76557.t1 MTR_2g015580 28.446 341 205 11 31 346 47 373 2.71e-33 127
MS.gene76557.t1 MTR_8g089805 28.329 353 198 12 30 346 39 372 1.24e-32 125
MS.gene76557.t1 MTR_8g022810 28.037 321 166 9 31 345 41 302 1.37e-32 124
MS.gene76557.t1 MTR_1g030268 35.125 279 149 11 30 290 39 303 7.41e-32 122
MS.gene76557.t1 MTR_2g043980 31.016 374 194 17 3 347 7 345 2.92e-31 121
MS.gene76557.t1 MTR_3g463960 27.300 337 217 11 31 347 44 372 4.17e-31 121
MS.gene76557.t1 MTR_3g463950 27.300 337 217 11 31 347 44 372 4.17e-31 121
MS.gene76557.t1 MTR_3g463970 27.300 337 217 11 31 347 44 372 4.17e-31 121
MS.gene76557.t1 MTR_3g463940 27.300 337 217 11 31 347 44 372 4.17e-31 121
MS.gene76557.t1 MTR_7g033150 26.611 357 209 13 31 351 35 374 1.14e-30 120
MS.gene76557.t1 MTR_3g463930 27.559 381 225 15 9 347 8 379 2.05e-30 119
MS.gene76557.t1 MTR_8g028160 28.080 349 211 12 31 351 36 372 4.14e-30 119
MS.gene76557.t1 MTR_7g033165 30.058 346 199 13 30 346 32 363 4.38e-30 118
MS.gene76557.t1 MTR_7g113860 29.855 345 201 14 30 346 28 359 2.21e-29 116
MS.gene76557.t1 MTR_1g030265 30.526 285 165 9 89 345 54 333 1.06e-28 114
MS.gene76557.t1 MTR_2g079090 27.473 364 224 14 3 347 1 343 1.57e-28 114
MS.gene76557.t1 MTR_7g111780 28.406 345 200 14 30 351 34 354 2.50e-28 113
MS.gene76557.t1 MTR_0029s0050 27.473 364 224 14 3 347 1 343 2.55e-28 113
MS.gene76557.t1 MTR_0127s0040 31.364 220 139 7 129 342 4 217 4.33e-28 110
MS.gene76557.t1 MTR_2g015590 28.261 368 220 14 6 347 10 359 4.85e-28 113
MS.gene76557.t1 MTR_2g015630 27.193 342 202 13 36 347 36 360 5.97e-28 112
MS.gene76557.t1 MTR_7g113860 29.070 344 205 13 30 346 34 365 6.45e-28 112
MS.gene76557.t1 MTR_7g116870 26.158 367 235 11 3 346 7 360 7.50e-28 112
MS.gene76557.t1 MTR_7g033155 26.027 365 212 12 31 351 38 388 1.19e-27 112
MS.gene76557.t1 MTR_0029s0100 27.473 364 224 14 3 347 1 343 1.78e-27 111
MS.gene76557.t1 MTR_2g018015 37.037 189 113 5 29 213 34 220 2.42e-27 109
MS.gene76557.t1 MTR_5g093090 36.316 190 107 7 10 191 11 194 2.60e-27 107
MS.gene76557.t1 MTR_1g082390 27.479 353 208 11 30 351 30 365 3.09e-27 110
MS.gene76557.t1 MTR_2g079080 26.923 364 226 14 3 347 1 343 4.31e-27 110
MS.gene76557.t1 MTR_6g007100 27.035 344 219 12 23 351 25 351 7.00e-27 109
MS.gene76557.t1 MTR_3g069780 27.123 365 236 13 3 347 1 355 8.54e-27 109
MS.gene76557.t1 MTR_6g007095 27.507 349 212 12 28 351 38 370 3.63e-26 110
MS.gene76557.t1 MTR_6g007095 27.679 336 208 13 34 351 368 686 2.44e-24 104
MS.gene76557.t1 MTR_2g087292 28.875 329 140 10 29 350 31 272 6.55e-26 105
MS.gene76557.t1 MTR_3g438030 26.849 365 237 13 3 347 1 355 2.09e-25 105
MS.gene76557.t1 MTR_6g007090 27.405 343 206 14 30 346 38 363 3.75e-24 102
MS.gene76557.t1 MTR_3g448360 25.613 367 239 12 3 347 1 355 7.71e-23 98.6
MS.gene76557.t1 MTR_8g089805 26.027 292 166 9 91 346 27 304 8.18e-23 97.8
MS.gene76557.t1 MTR_2g015650 28.863 343 213 14 31 352 31 363 3.42e-22 96.7
MS.gene76557.t1 MTR_4g104240 24.269 342 213 10 32 347 40 361 4.05e-22 96.7
MS.gene76557.t1 MTR_7g111780 27.037 270 162 8 101 351 2 255 3.94e-21 92.0
MS.gene76557.t1 MTR_3g069520 25.201 373 231 13 3 347 1 353 1.19e-20 92.0
MS.gene76557.t1 MTR_8g038680 24.786 351 224 12 28 351 25 362 3.73e-20 90.9
MS.gene76557.t1 MTR_7g104220 26.163 344 224 13 11 345 22 344 1.36e-19 89.0
MS.gene76557.t1 MTR_5g084880 39.423 104 63 0 187 290 9 112 3.15e-19 83.6
MS.gene76557.t1 MTR_2g015670 26.393 341 210 12 31 352 31 349 3.26e-19 87.8
MS.gene76557.t1 MTR_7g113860 28.148 270 160 9 104 346 29 291 4.50e-19 87.0
MS.gene76557.t1 MTR_2g017925 29.358 218 138 7 128 342 25 229 2.41e-18 84.0
MS.gene76557.t1 MTR_8g062580 37.719 114 69 2 229 342 66 177 3.01e-18 83.2
MS.gene76557.t1 MTR_1g060500 27.410 332 210 12 32 350 41 354 3.16e-18 85.1
MS.gene76557.t1 MTR_7g033165 29.682 283 163 12 30 290 32 300 3.77e-18 84.3
MS.gene76557.t1 MTR_1g092760 27.389 314 195 15 32 335 40 330 1.52e-17 83.2
MS.gene76557.t1 MTR_1g092750 25.153 326 214 14 25 341 34 338 1.77e-17 82.8
MS.gene76557.t1 MTR_1g060490 25.000 336 211 12 32 353 38 346 6.60e-17 81.3
MS.gene76557.t1 MTR_2g043990 28.296 311 157 14 3 289 69 337 1.48e-16 80.1
MS.gene76557.t1 MTR_2g015590 26.623 308 185 12 6 290 10 299 5.65e-16 78.6
MS.gene76557.t1 MTR_1g092690 24.159 327 206 12 23 335 43 341 1.22e-15 77.8
MS.gene76557.t1 MTR_4g056290 52.542 59 27 1 293 351 47 104 1.27e-14 70.1
MS.gene76557.t1 MTR_5g062890 56.667 60 25 1 26 84 23 82 9.80e-14 67.0
MS.gene76557.t1 MTR_6g034400 30.645 124 86 0 81 204 1 124 1.44e-13 67.4
MS.gene76557.t1 MTR_1g092740 25.000 316 200 13 32 335 39 329 1.64e-13 71.2
MS.gene76557.t1 MTR_8g012540 23.548 310 205 8 12 301 9 306 1.88e-13 70.9
MS.gene76557.t1 MTR_5g093550 55.172 58 24 2 288 345 77 132 1.86e-12 64.7
MS.gene76557.t1 MTR_2g017895 22.305 269 174 8 79 342 5 243 6.04e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76557.t1 AT3G16370 76.758 327 76 0 28 354 27 353 0.0 528
MS.gene76557.t1 AT5G22810 59.429 350 136 3 9 353 10 358 7.49e-151 429
MS.gene76557.t1 AT5G03810 58.310 355 143 4 1 353 1 352 1.39e-148 423
MS.gene76557.t1 AT5G03820 58.708 356 141 4 1 353 4 356 3.91e-148 422
MS.gene76557.t1 AT5G03820 58.939 358 137 5 1 353 32 384 2.61e-147 421
MS.gene76557.t1 AT3G53100 53.374 326 151 1 28 353 26 350 8.17e-134 385
MS.gene76557.t1 AT2G04570 44.340 318 176 1 29 346 26 342 2.65e-98 295
MS.gene76557.t1 AT5G42170 43.478 322 176 3 26 346 45 361 2.62e-95 288
MS.gene76557.t1 AT2G42990 41.562 320 186 1 29 348 26 344 6.58e-95 286
MS.gene76557.t1 AT4G26790 40.994 322 189 1 30 351 28 348 2.07e-92 280
MS.gene76557.t1 AT4G26790 40.994 322 189 1 30 351 28 348 2.07e-92 280
MS.gene76557.t1 AT3G14820 41.925 322 182 3 27 348 28 344 9.09e-91 276
MS.gene76557.t1 AT1G59406 40.625 352 202 5 1 351 1 346 2.72e-90 275
MS.gene76557.t1 AT1G59030 40.625 352 202 5 1 351 1 346 2.72e-90 275
MS.gene76557.t1 AT1G58725 40.625 352 202 5 1 351 1 346 2.72e-90 275
MS.gene76557.t1 AT1G20120 41.231 325 190 1 26 350 73 396 2.89e-90 276
MS.gene76557.t1 AT5G45960 42.949 312 171 4 29 335 45 354 2.64e-87 268
MS.gene76557.t1 AT2G24560 41.692 331 186 6 22 348 25 352 3.08e-87 267
MS.gene76557.t1 AT2G30220 41.076 353 187 9 10 348 9 354 5.23e-87 266
MS.gene76557.t1 AT2G30310 41.667 324 176 6 21 337 24 341 5.94e-87 266
MS.gene76557.t1 AT1G75880 38.905 347 204 2 9 348 23 368 8.50e-87 266
MS.gene76557.t1 AT1G75900 40.123 324 186 3 28 348 40 358 3.29e-86 265
MS.gene76557.t1 AT1G58430 41.104 326 187 5 23 345 27 350 5.63e-86 264
MS.gene76557.t1 AT1G06990 38.889 324 194 3 27 348 33 354 1.56e-85 263
MS.gene76557.t1 AT1G75880 39.080 348 203 3 9 348 23 369 1.68e-85 263
MS.gene76557.t1 AT2G31540 40.541 333 183 7 21 345 25 350 1.87e-85 263
MS.gene76557.t1 AT1G75890 40.123 324 192 2 26 348 42 364 5.17e-85 262
MS.gene76557.t1 AT1G75890 40.123 324 192 2 26 348 71 393 1.01e-84 262
MS.gene76557.t1 AT1G58520 40.426 329 183 5 26 353 25 341 1.69e-84 259
MS.gene76557.t1 AT1G58525 40.426 329 183 5 26 353 25 341 1.69e-84 259
MS.gene76557.t1 AT1G75890 39.039 333 188 3 30 348 46 377 9.03e-82 254
MS.gene76557.t1 AT2G40250 36.538 364 217 5 1 353 1 361 1.48e-81 253
MS.gene76557.t1 AT5G45950 40.566 318 182 4 29 346 38 348 8.59e-81 251
MS.gene76557.t1 AT5G63170 40.514 311 168 4 29 337 26 321 8.21e-77 240
MS.gene76557.t1 AT3G43570 37.730 326 170 4 26 351 25 317 4.87e-76 237
MS.gene76557.t1 AT1G20132 35.474 327 206 3 26 350 56 379 2.47e-72 230
MS.gene76557.t1 AT1G20130 35.965 342 199 5 25 353 178 512 1.57e-70 229
MS.gene76557.t1 AT1G20130 35.965 342 199 5 25 353 198 532 2.46e-70 229
MS.gene76557.t1 AT1G75920 35.693 339 204 3 12 348 11 337 3.43e-68 218
MS.gene76557.t1 AT1G23500 39.118 340 186 4 9 347 19 338 4.69e-67 215
MS.gene76557.t1 AT1G73610 34.561 353 209 5 3 348 1 338 6.98e-66 212
MS.gene76557.t1 AT2G24560 39.711 277 162 4 22 294 25 300 3.13e-65 209
MS.gene76557.t1 AT1G75920 34.463 354 203 4 12 348 6 347 1.07e-64 209
MS.gene76557.t1 AT3G43550 39.474 266 156 3 26 290 25 286 4.64e-64 205
MS.gene76557.t1 AT1G29670 36.657 341 197 11 11 342 10 340 2.19e-63 206
MS.gene76557.t1 AT1G29670 36.657 341 197 11 11 342 78 408 1.27e-62 206
MS.gene76557.t1 AT3G04290 36.025 322 193 8 31 346 29 343 1.74e-62 204
MS.gene76557.t1 AT1G20135 34.954 329 198 5 10 337 9 322 1.11e-61 201
MS.gene76557.t1 AT1G75910 34.783 322 196 3 30 348 27 337 5.11e-61 199
MS.gene76557.t1 AT2G23540 33.978 362 220 7 9 353 17 376 6.77e-61 200
MS.gene76557.t1 AT4G28780 34.251 327 206 7 24 346 24 345 3.44e-60 198
MS.gene76557.t1 AT5G15720 36.443 343 188 10 16 342 14 342 2.66e-59 196
MS.gene76557.t1 AT5G33370 35.093 322 196 9 31 346 30 344 3.74e-59 195
MS.gene76557.t1 AT3G50400 33.989 356 218 9 6 346 3 356 2.76e-58 193
MS.gene76557.t1 AT1G29660 34.006 347 218 8 1 342 1 341 5.87e-58 192
MS.gene76557.t1 AT5G18430 33.125 320 207 5 31 346 28 344 4.56e-57 189
MS.gene76557.t1 AT1G75930 34.545 330 199 5 23 348 21 337 2.84e-56 187
MS.gene76557.t1 AT4G10950 30.915 317 214 4 29 343 69 382 5.11e-56 188
MS.gene76557.t1 AT4G18970 34.472 322 200 7 26 342 23 338 6.17e-56 187
MS.gene76557.t1 AT1G75920 32.153 339 185 4 12 348 11 306 1.78e-55 184
MS.gene76557.t1 AT4G18970 34.472 322 200 7 26 342 23 338 2.60e-55 186
MS.gene76557.t1 AT1G75920 34.343 297 182 2 54 348 24 309 1.44e-54 182
MS.gene76557.t1 AT5G45670 33.431 341 217 7 6 341 3 338 2.51e-54 182
MS.gene76557.t1 AT5G41890 34.242 330 194 9 35 347 35 358 3.16e-53 180
MS.gene76557.t1 AT5G37690 33.651 315 198 7 35 345 31 338 6.48e-53 179
MS.gene76557.t1 AT4G10950 30.599 317 211 5 29 343 69 378 8.86e-53 179
MS.gene76557.t1 AT1G71250 33.438 317 204 5 29 342 39 351 1.55e-52 178
MS.gene76557.t1 AT1G53920 33.030 330 208 8 26 349 43 365 3.57e-52 177
MS.gene76557.t1 AT1G33811 32.578 353 220 10 5 344 4 351 3.92e-52 177
MS.gene76557.t1 AT1G71691 34.259 324 194 9 26 342 50 361 1.55e-50 173
MS.gene76557.t1 AT2G31550 38.605 215 118 6 138 345 2 209 1.83e-49 166
MS.gene76557.t1 AT5G08460 29.912 341 227 7 9 342 28 363 8.76e-49 169
MS.gene76557.t1 AT2G19050 33.956 321 189 10 29 344 29 331 1.55e-48 167
MS.gene76557.t1 AT5G37690 33.016 315 192 8 35 345 31 330 1.59e-48 167
MS.gene76557.t1 AT2G19010 32.827 329 194 11 30 351 29 337 2.30e-48 166
MS.gene76557.t1 AT2G19010 32.827 329 194 11 30 351 59 367 4.43e-48 166
MS.gene76557.t1 AT1G71120 32.622 328 205 8 23 345 23 339 3.57e-47 164
MS.gene76557.t1 AT2G19060 32.641 337 198 12 28 353 27 345 4.55e-47 163
MS.gene76557.t1 AT1G74460 33.043 345 217 10 8 348 5 339 1.42e-46 162
MS.gene76557.t1 AT5G33370 35.338 266 161 7 31 290 30 290 9.39e-46 159
MS.gene76557.t1 AT5G15720 36.770 291 156 9 16 290 14 292 2.15e-45 158
MS.gene76557.t1 AT5G55050 31.402 328 209 10 29 346 37 358 2.41e-45 159
MS.gene76557.t1 AT3G14225 28.659 328 222 6 31 349 37 361 1.07e-43 155
MS.gene76557.t1 AT3G14225 28.037 321 222 5 31 345 37 354 1.21e-42 152
MS.gene76557.t1 AT5G40990 29.283 321 218 5 31 345 37 354 3.11e-42 151
MS.gene76557.t1 AT1G53940 28.571 357 237 7 4 345 3 356 7.71e-42 150
MS.gene76557.t1 AT1G53990 28.775 351 222 8 9 345 9 345 3.39e-41 148
MS.gene76557.t1 AT4G30140 30.503 318 200 10 30 344 32 331 4.83e-41 147
MS.gene76557.t1 AT4G16230 38.537 205 120 3 29 229 28 230 3.71e-40 142
MS.gene76557.t1 AT1G28610 31.579 342 195 11 31 347 31 358 3.77e-36 135
MS.gene76557.t1 AT5G15720 32.331 266 154 7 92 342 57 311 4.43e-36 134
MS.gene76557.t1 AT5G14450 29.199 387 217 16 1 346 1 371 4.81e-36 135
MS.gene76557.t1 AT2G19050 32.700 263 161 7 29 289 29 277 4.97e-36 132
MS.gene76557.t1 AT1G71691 33.456 272 164 8 26 290 50 311 5.21e-36 133
MS.gene76557.t1 AT2G27360 31.085 341 198 12 31 346 33 361 2.06e-35 133
MS.gene76557.t1 AT1G28580 30.178 338 204 12 31 346 37 364 6.18e-34 129
MS.gene76557.t1 AT1G28650 30.267 337 205 12 31 346 37 364 3.64e-33 127
MS.gene76557.t1 AT1G28640 28.783 337 210 12 31 346 35 362 6.29e-33 126
MS.gene76557.t1 AT1G28570 29.254 335 213 11 31 347 34 362 8.28e-33 126
MS.gene76557.t1 AT1G31550 30.029 343 199 13 31 347 36 363 3.61e-32 124
MS.gene76557.t1 AT1G28600 28.846 364 219 14 10 346 7 357 4.54e-32 124
MS.gene76557.t1 AT1G54790 27.536 345 209 12 30 346 31 362 3.80e-31 121
MS.gene76557.t1 AT4G01130 27.586 377 234 14 3 351 5 370 5.68e-31 121
MS.gene76557.t1 AT1G71691 30.350 257 162 7 93 342 14 260 5.90e-31 119
MS.gene76557.t1 AT1G28590 29.240 342 204 12 31 347 36 364 2.43e-30 119
MS.gene76557.t1 AT1G28670 29.882 338 206 12 31 346 35 363 3.81e-30 119
MS.gene76557.t1 AT3G48460 26.176 340 211 11 32 347 39 362 6.03e-30 118
MS.gene76557.t1 AT1G53940 28.188 298 200 6 4 290 3 297 9.22e-30 116
MS.gene76557.t1 AT1G67830 27.826 345 208 12 30 345 29 361 1.29e-29 117
MS.gene76557.t1 AT3G05180 27.729 339 208 10 30 342 35 362 2.69e-29 116
MS.gene76557.t1 AT2G03980 27.761 335 207 11 30 348 42 357 6.20e-29 115
MS.gene76557.t1 AT2G03980 27.761 335 207 11 30 348 42 357 6.20e-29 115
MS.gene76557.t1 AT2G03980 27.761 335 207 11 30 348 42 357 6.20e-29 115
MS.gene76557.t1 AT2G03980 27.761 335 207 11 30 348 42 357 6.20e-29 115
MS.gene76557.t1 AT1G09390 28.000 325 215 9 28 342 34 349 1.12e-28 114
MS.gene76557.t1 AT1G56670 26.100 341 221 10 27 351 36 361 2.21e-28 114
MS.gene76557.t1 AT1G31550 29.240 342 200 14 31 347 36 360 2.60e-28 114
MS.gene76557.t1 AT1G28660 28.190 337 212 11 31 346 35 362 4.38e-28 113
MS.gene76557.t1 AT3G14220 26.791 321 209 10 30 343 31 332 2.70e-27 110
MS.gene76557.t1 AT3G62280 26.647 334 210 11 30 346 35 350 1.13e-26 108
MS.gene76557.t1 AT1G28660 28.190 337 211 12 31 346 35 361 1.27e-26 109
MS.gene76557.t1 AT1G54030 27.653 311 195 10 32 338 53 337 3.49e-26 108
MS.gene76557.t1 AT1G54790 25.134 374 239 12 1 346 1 361 1.42e-25 106
MS.gene76557.t1 AT3G26430 29.204 339 197 14 30 338 30 355 3.87e-25 105
MS.gene76557.t1 AT1G54020 26.791 321 206 10 29 342 29 327 5.81e-25 104
MS.gene76557.t1 AT1G54010 25.449 334 221 9 29 353 32 346 1.01e-24 103
MS.gene76557.t1 AT3G27950 26.879 346 213 11 30 351 31 360 6.51e-24 101
MS.gene76557.t1 AT5G45910 27.105 380 235 16 3 352 1 368 1.93e-23 100
MS.gene76557.t1 AT2G04020 33.168 202 122 6 30 226 42 235 5.00e-22 94.4
MS.gene76557.t1 AT1G54000 25.301 332 220 10 23 346 28 339 5.07e-22 96.7
MS.gene76557.t1 AT2G04020 33.168 202 122 6 30 226 42 235 9.18e-22 94.7
MS.gene76557.t1 AT1G54790 23.500 400 239 13 1 346 1 387 1.37e-20 92.4
MS.gene76557.t1 AT1G28580 27.465 284 178 10 82 346 9 283 1.55e-20 91.3
MS.gene76557.t1 AT5G03610 26.023 342 218 13 21 347 29 350 1.68e-20 91.7
MS.gene76557.t1 AT3G14210 27.356 329 201 13 31 345 36 340 3.36e-20 91.3
MS.gene76557.t1 AT4G01130 26.923 286 176 10 95 351 3 284 3.87e-20 89.7
MS.gene76557.t1 AT3G09930 26.984 315 200 11 32 335 40 335 1.09e-19 89.4
MS.gene76557.t1 AT3G09930 26.984 315 200 11 32 335 40 335 1.09e-19 89.4
MS.gene76557.t1 AT4G01130 26.557 305 196 11 3 290 5 298 1.62e-19 88.6
MS.gene76557.t1 AT5G03600 25.967 362 213 13 3 345 21 346 7.61e-18 84.0
MS.gene76557.t1 AT4G16220 48.182 110 50 3 8 117 12 114 9.36e-18 82.0
MS.gene76557.t1 AT5G03600 26.190 336 193 13 29 345 12 311 1.76e-17 82.4
MS.gene76557.t1 AT1G56670 26.354 277 176 9 27 290 36 297 5.54e-17 80.9
MS.gene76557.t1 AT1G54030 28.571 259 153 9 32 283 53 286 6.48e-17 80.9
MS.gene76557.t1 AT1G28570 26.238 202 135 6 157 347 1 199 7.10e-16 76.3
MS.gene76557.t1 AT1G28570 26.238 202 135 6 157 347 92 290 2.28e-15 76.3
MS.gene76557.t1 AT5G03980 25.316 237 152 8 130 353 94 318 2.76e-15 76.3
MS.gene76557.t1 AT1G54020 24.242 264 176 7 86 345 1 244 5.17e-14 72.0
MS.gene76557.t1 AT1G54020 24.242 264 176 7 86 345 1 244 5.17e-14 72.0
MS.gene76557.t1 AT1G54020 24.242 264 176 7 86 345 1 244 5.17e-14 72.0
MS.gene76557.t1 AT1G54020 25.397 189 137 3 158 345 10 195 1.79e-13 69.7
MS.gene76557.t1 AT4G16233 29.630 108 75 1 239 346 6 112 5.92e-13 65.9
MS.gene76557.t1 AT1G28610 32.530 166 87 7 29 179 29 184 1.09e-11 64.7
MS.gene76557.t1 AT1G28600 32.402 179 94 10 11 172 8 176 1.98e-11 63.5

Find 67 sgRNAs with CRISPR-Local

Find 105 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCAATCCCCTTCAAAATT+TGG 0.113263 2.3:-3119275 MS.gene76557:intron
AACACAGGACTTGTATAAAT+TGG 0.145557 2.3:-3119516 MS.gene76557:intron
AAAACCTCCCAGTGGGTTTA+TGG 0.171244 2.3:+3120336 None:intergenic
AAGGATTGACATAATAGTTT+TGG 0.253181 2.3:+3119757 None:intergenic
GTGACAACTTTGTTGATTAA+AGG 0.259570 2.3:+3119738 None:intergenic
TAAGACCAGGAAGTTGCTTT+TGG 0.276088 2.3:+3119339 None:intergenic
TTGTGCATCATTGTTGATTC+TGG 0.278755 2.3:+3119400 None:intergenic
AAAGCTAACTATCCTCCTTA+TGG 0.312317 2.3:-3120374 MS.gene76557:CDS
AGGAAAGGCTGCTGTGGAAC+TGG 0.322949 2.3:-3119143 MS.gene76557:CDS
ATGCAACTCAGTATGTGTTT+TGG 0.323360 2.3:-3119064 MS.gene76557:CDS
CCTGCTACAAGGACTTTGTT+TGG 0.340385 2.3:-3119446 MS.gene76557:CDS
CAAGGTAGCTGGAAGTAAAA+AGG 0.359520 2.3:-3119838 MS.gene76557:CDS
GGCATAAGCCTTATCGGTTA+AGG 0.371190 2.3:-3118981 None:intergenic
GAACAAGGCATAAGCCTTAT+CGG 0.374261 2.3:-3118987 MS.gene76557:CDS
AAGGCAGCATCAATTATTAA+AGG 0.375056 2.3:-3119819 MS.gene76557:CDS
TCACCAAACGTCACGATTGC+CGG 0.392033 2.3:+3120443 None:intergenic
AAACTCCAAAAGCAACTTCC+TGG 0.409834 2.3:-3119344 MS.gene76557:CDS
ACACAGGACTTGTATAAATT+GGG 0.411497 2.3:-3119515 MS.gene76557:intron
TGGTGACTCTGCTGTGGATG+TGG 0.414876 2.3:-3120426 MS.gene76557:CDS
CAAAATTTGCTCCAATAAGA+AGG 0.415639 2.3:+3120037 None:intergenic
AAATTAGCTACTGATATTAC+TGG 0.418320 2.3:-3120305 MS.gene76557:intron
GGTGACTCTGCTGTGGATGT+GGG 0.428006 2.3:-3120425 MS.gene76557:CDS
TATCTTAGCCCTCAAGCAAC+AGG 0.436881 2.3:-3120066 MS.gene76557:CDS
TTGTTTGGATTCCATGAGAA+AGG 0.448046 2.3:-3119431 MS.gene76557:CDS
GTTGCATTAGAACAGGTTCC+TGG 0.453335 2.3:+3119080 None:intergenic
CACTACTTCCACCACTCAAT+AGG 0.457776 2.3:+3119787 None:intergenic
CTACCTTGGAAAGCTTACTT+TGG 0.474075 2.3:+3119853 None:intergenic
CTAACAAAGTCTCTTCCATA+AGG 0.478982 2.3:+3120359 None:intergenic
GTTCCGGCAATCGTGACGTT+TGG 0.482783 2.3:-3120446 MS.gene76557:CDS
ATACTGAGTTGCATTAGAAC+AGG 0.482835 2.3:+3119073 None:intergenic
TGCATCTGGTTATGATGAAA+AGG 0.486563 2.3:-3120007 MS.gene76557:CDS
AGTGACTTCACTACCACCAT+TGG 0.497426 2.3:-3119477 MS.gene76557:CDS
AGTAAGCTTTCCAAGGTAGC+TGG 0.499862 2.3:-3119849 MS.gene76557:CDS
ACAAGATGATACTGTTGTTC+CGG 0.501937 2.3:-3120462 MS.gene76557:CDS
TGGTGACACAACCTTTCTCA+TGG 0.505021 2.3:+3119420 None:intergenic
GGAAAGGCTGCTGTGGAACT+GGG 0.509378 2.3:-3119142 MS.gene76557:CDS
AGGTATGCAGAATATTGATC+AGG 0.511148 2.3:+3119714 None:intergenic
CCAAACAAAGTCCTTGTAGC+AGG 0.515201 2.3:+3119446 None:intergenic
GTGACTTCACTACCACCATT+GGG 0.516685 2.3:-3119476 MS.gene76557:CDS
TCAATGCATCAGCTAGAACT+TGG 0.522397 2.3:+3119012 None:intergenic
GCATGAATCCTTAACCGATA+AGG 0.523528 2.3:+3118973 None:intergenic
GAGGCAAGGAAAGGCTGCTG+TGG 0.548555 2.3:-3119149 MS.gene76557:CDS
TTTGTTAGCCATAAACCCAC+TGG 0.558300 2.3:-3120344 MS.gene76557:CDS
CCATTGCAAAACCTCCCAGT+GGG 0.560224 2.3:+3120329 None:intergenic
GCTTGAGGGCTAAGATATGC+AGG 0.564871 2.3:+3120072 None:intergenic
TGGGTTGCCTACCTGCTACA+AGG 0.564941 2.3:-3119457 MS.gene76557:CDS
GTGACTCTGCTGTGGATGTG+GGG 0.573179 2.3:-3120424 MS.gene76557:CDS
GACGTTTGGTGACTCTGCTG+TGG 0.577397 2.3:-3120432 MS.gene76557:CDS
ACTTGGTTAGCAGCTTCTGA+AGG 0.578036 2.3:+3119029 None:intergenic
GATTGAACAAGTTCATAGAG+AGG 0.612422 2.3:+3119290 None:intergenic
ATACCAAAGTAAGCTTTCCA+AGG 0.615809 2.3:-3119856 MS.gene76557:CDS
ACAAAGTCTCTTCCATAAGG+AGG 0.615968 2.3:+3120362 None:intergenic
GCAACAGTTAAAATATTACA+AGG 0.623783 2.3:-3119880 MS.gene76557:CDS
TTGTGCAATCAAAAGTCACC+AGG 0.626995 2.3:-3119098 MS.gene76557:CDS
GCAGGTAGGCAACCCAATGG+TGG 0.643466 2.3:+3119464 None:intergenic
AAGACAACAATCTTAAGACC+AGG 0.651941 2.3:+3119326 None:intergenic
TTGTTAGCCATAAACCCACT+GGG 0.652946 2.3:-3120343 MS.gene76557:CDS
AGAATCAACAATGATGCACA+AGG 0.655662 2.3:-3119398 MS.gene76557:CDS
GCTGATGCATTGATTGAACA+AGG 0.656923 2.3:-3119002 MS.gene76557:CDS
GCCATTGCAAAACCTCCCAG+TGG 0.660851 2.3:+3120328 None:intergenic
GTAGCAGGTAGGCAACCCAA+TGG 0.662304 2.3:+3119461 None:intergenic
ACAAAGTCCTTGTAGCAGGT+AGG 0.673754 2.3:+3119450 None:intergenic
GCATTGTACCTATTGAGTGG+TGG 0.691170 2.3:-3119795 MS.gene76557:CDS
ATTTAACAAGAAAATCAACT+CGG 0.691992 2.3:-3119375 MS.gene76557:CDS
AACTTGAGTATGTATCAACA+AGG 0.714639 2.3:+3119694 None:intergenic
TTAGCCATAAACCCACTGGG+AGG 0.727905 2.3:-3120340 MS.gene76557:CDS
GGTGCATTGTACCTATTGAG+TGG 0.748700 2.3:-3119798 MS.gene76557:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTACAATTGTTATAAATATA+TGG + chr2.3:3119884-3119903 None:intergenic 15.0%
!! AAAAACAAAGCAACTTTAAA+TGG + chr2.3:3119976-3119995 None:intergenic 20.0%
!! ATTTAACAAGAAAATCAACT+CGG - chr2.3:3120138-3120157 MS.gene76557:intron 20.0%
! AAATTAGCTACTGATATTAC+TGG - chr2.3:3119208-3119227 MS.gene76557:intron 25.0%
! GCAACAGTTAAAATATTACA+AGG - chr2.3:3119633-3119652 MS.gene76557:intron 25.0%
!! AAATGTTAGTATTTTCTCCA+TGG - chr2.3:3119296-3119315 MS.gene76557:CDS 25.0%
!! AAGGATTGACATAATAGTTT+TGG + chr2.3:3119759-3119778 None:intergenic 25.0%
!! AATGTTAGTATTTTCTCCAT+GGG - chr2.3:3119297-3119316 MS.gene76557:CDS 25.0%
!! ATTGCTTACCAAATTTTGAA+GGG + chr2.3:3120249-3120268 None:intergenic 25.0%
!! TATTGCTTACCAAATTTTGA+AGG + chr2.3:3120250-3120269 None:intergenic 25.0%
!!! ATTAGTATTAGAAGTGTTGA+AGG + chr2.3:3119346-3119365 None:intergenic 25.0%
!!! TACATACTCAAGTTTTGTTA+AGG - chr2.3:3119828-3119847 MS.gene76557:CDS 25.0%
AAATTGGGAGCTAGAAAAAT+TGG - chr2.3:3120013-3120032 MS.gene76557:CDS 30.0%
AACACAGGACTTGTATAAAT+TGG - chr2.3:3119997-3120016 MS.gene76557:CDS 30.0%
AACTTGAGTATGTATCAACA+AGG + chr2.3:3119822-3119841 None:intergenic 30.0%
AAGGCAGCATCAATTATTAA+AGG - chr2.3:3119694-3119713 MS.gene76557:CDS 30.0%
ACACAGGACTTGTATAAATT+GGG - chr2.3:3119998-3120017 MS.gene76557:CDS 30.0%
ACAGGAAAAAACCTTCTTAT+TGG - chr2.3:3119465-3119484 MS.gene76557:CDS 30.0%
TCTATCTTGTGACATTCAAT+AGG - chr2.3:3120334-3120353 MS.gene76557:CDS 30.0%
TTATTTGTAACGATGTGGTA+TGG + chr2.3:3119951-3119970 None:intergenic 30.0%
! CAAAATTTGCTCCAATAAGA+AGG + chr2.3:3119479-3119498 None:intergenic 30.0%
! GTGACAACTTTGTTGATTAA+AGG + chr2.3:3119778-3119797 None:intergenic 30.0%
! GTGTTTGCATTTGTGTTTTT+GGG - chr2.3:3119016-3119035 MS.gene76557:CDS 30.0%
! TGTGTTTGCATTTGTGTTTT+TGG - chr2.3:3119015-3119034 MS.gene76557:CDS 30.0%
!! AAGTGTTGAAGGTCTTAAAA+GGG + chr2.3:3119335-3119354 None:intergenic 30.0%
!! TGACTTTTGATTGCACAATA+AGG + chr2.3:3120413-3120432 None:intergenic 30.0%
!! TTGCTTACCAAATTTTGAAG+GGG + chr2.3:3120248-3120267 None:intergenic 30.0%
!!! GTTGCTTTGTTTTTTAACAC+AGG - chr2.3:3119982-3120001 MS.gene76557:intron 30.0%
!!! TATTTTAACTGTTGCGACAA+TGG + chr2.3:3119628-3119647 None:intergenic 30.0%
!!! TGGTTTTATTTGTAACGATG+TGG + chr2.3:3119956-3119975 None:intergenic 30.0%
AAAGCTAACTATCCTCCTTA+TGG - chr2.3:3119139-3119158 MS.gene76557:CDS 35.0%
AAGACAACAATCTTAAGACC+AGG + chr2.3:3120190-3120209 None:intergenic 35.0%
ACAAGATGATACTGTTGTTC+CGG - chr2.3:3119051-3119070 MS.gene76557:CDS 35.0%
AGAATCAACAATGATGCACA+AGG - chr2.3:3120115-3120134 MS.gene76557:intron 35.0%
AGGTATGCAGAATATTGATC+AGG + chr2.3:3119802-3119821 None:intergenic 35.0%
ATACCAAAGTAAGCTTTCCA+AGG - chr2.3:3119657-3119676 MS.gene76557:intron 35.0%
ATACTGAGTTGCATTAGAAC+AGG + chr2.3:3120443-3120462 None:intergenic 35.0%
CTAACAAAGTCTCTTCCATA+AGG + chr2.3:3119157-3119176 None:intergenic 35.0%
GATTGAACAAGTTCATAGAG+AGG + chr2.3:3120226-3120245 None:intergenic 35.0%
GTTCAATCCCCTTCAAAATT+TGG - chr2.3:3120238-3120257 MS.gene76557:intron 35.0%
TGCATCTGGTTATGATGAAA+AGG - chr2.3:3119506-3119525 MS.gene76557:CDS 35.0%
TTGTTTGGATTCCATGAGAA+AGG - chr2.3:3120082-3120101 MS.gene76557:CDS 35.0%
! ATGCAACTCAGTATGTGTTT+TGG - chr2.3:3120449-3120468 MS.gene76557:CDS 35.0%
! CTTTTTGTAGCTGATACACT+GGG - chr2.3:3119402-3119421 MS.gene76557:CDS 35.0%
! GTGACATTCAATAGGTTTTG+CGG - chr2.3:3120342-3120361 MS.gene76557:CDS 35.0%
! TCTTTTTGTAGCTGATACAC+TGG - chr2.3:3119401-3119420 MS.gene76557:CDS 35.0%
! TGCAACTCAGTATGTGTTTT+GGG - chr2.3:3120450-3120469 MS.gene76557:CDS 35.0%
!! GAAGTGTTGAAGGTCTTAAA+AGG + chr2.3:3119336-3119355 None:intergenic 35.0%
!! TTGTGCATCATTGTTGATTC+TGG + chr2.3:3120116-3120135 None:intergenic 35.0%
!!! TGCATTTGTGTTTTTGGGAT+GGG - chr2.3:3119021-3119040 MS.gene76557:CDS 35.0%
!!! TTGCATTTGTGTTTTTGGGA+TGG - chr2.3:3119020-3119039 MS.gene76557:CDS 35.0%
AAACTCCAAAAGCAACTTCC+TGG - chr2.3:3120169-3120188 MS.gene76557:intron 40.0%
ACAAAGTCTCTTCCATAAGG+AGG + chr2.3:3119154-3119173 None:intergenic 40.0%
CAAGGTAGCTGGAAGTAAAA+AGG - chr2.3:3119675-3119694 MS.gene76557:intron 40.0%
CTACCTTGGAAAGCTTACTT+TGG + chr2.3:3119663-3119682 None:intergenic 40.0%
TCAATGCATCAGCTAGAACT+TGG + chr2.3:3120504-3120523 None:intergenic 40.0%
TTCTCCATGGGTTTGAATCT+CGG - chr2.3:3119309-3119328 MS.gene76557:CDS 40.0%
TTGTGCAATCAAAAGTCACC+AGG - chr2.3:3120415-3120434 MS.gene76557:CDS 40.0%
TTGTTAGCCATAAACCCACT+GGG - chr2.3:3119170-3119189 MS.gene76557:intron 40.0%
TTTGTTAGCCATAAACCCAC+TGG - chr2.3:3119169-3119188 MS.gene76557:intron 40.0%
! AATTTTGCTTCAGCTGCATC+TGG - chr2.3:3119492-3119511 MS.gene76557:CDS 40.0%
! ACATTCAATAGGTTTTGCGG+AGG - chr2.3:3120345-3120364 MS.gene76557:CDS 40.0%
! CTTTTTACTTCCAGCTACCT+TGG + chr2.3:3119677-3119696 None:intergenic 40.0%
! GAACAAGGCATAAGCCTTAT+CGG - chr2.3:3120526-3120545 MS.gene76557:CDS 40.0%
!! GCTGATGCATTGATTGAACA+AGG - chr2.3:3120511-3120530 MS.gene76557:CDS 40.0%
!! TAAGACCAGGAAGTTGCTTT+TGG + chr2.3:3120177-3120196 None:intergenic 40.0%
!!! AGGTTTTTTCCTGTTGCTTG+AGG + chr2.3:3119459-3119478 None:intergenic 40.0%
!!! CATTTGTGTTTTTGGGATGG+GGG - chr2.3:3119023-3119042 MS.gene76557:CDS 40.0%
!!! GCATTTGTGTTTTTGGGATG+GGG - chr2.3:3119022-3119041 MS.gene76557:CDS 40.0%
!!! GGTTTTTTCCTGTTGCTTGA+GGG + chr2.3:3119458-3119477 None:intergenic 40.0%
ACAAAGTCCTTGTAGCAGGT+AGG + chr2.3:3120066-3120085 None:intergenic 45.0%
ACTTGGTTAGCAGCTTCTGA+AGG + chr2.3:3120487-3120506 None:intergenic 45.0%
AGTAAGCTTTCCAAGGTAGC+TGG - chr2.3:3119664-3119683 MS.gene76557:intron 45.0%
AGTGACTTCACTACCACCAT+TGG - chr2.3:3120036-3120055 MS.gene76557:CDS 45.0%
CACTACTTCCACCACTCAAT+AGG + chr2.3:3119729-3119748 None:intergenic 45.0%
CCAAACAAAGTCCTTGTAGC+AGG + chr2.3:3120070-3120089 None:intergenic 45.0%
CCTGCTACAAGGACTTTGTT+TGG - chr2.3:3120067-3120086 MS.gene76557:CDS 45.0%
GCATTGTACCTATTGAGTGG+TGG - chr2.3:3119718-3119737 MS.gene76557:CDS 45.0%
GGTGCATTGTACCTATTGAG+TGG - chr2.3:3119715-3119734 MS.gene76557:CDS 45.0%
GTGACTTCACTACCACCATT+GGG - chr2.3:3120037-3120056 MS.gene76557:CDS 45.0%
GTTGCATTAGAACAGGTTCC+TGG + chr2.3:3120436-3120455 None:intergenic 45.0%
TATCTTAGCCCTCAAGCAAC+AGG - chr2.3:3119447-3119466 MS.gene76557:CDS 45.0%
TGGTGACACAACCTTTCTCA+TGG + chr2.3:3120096-3120115 None:intergenic 45.0%
! AAAACCTCCCAGTGGGTTTA+TGG + chr2.3:3119180-3119199 None:intergenic 45.0%
!!! ATTGTAATTTTTTTTTTAAT+AGG - chr2.3:3119271-3119290 MS.gene76557:intron 5.0%
CCATTGCAAAACCTCCCAGT+GGG + chr2.3:3119187-3119206 None:intergenic 50.0%
GCTTGAGGGCTAAGATATGC+AGG + chr2.3:3119444-3119463 None:intergenic 50.0%
TCACCAAACGTCACGATTGC+CGG + chr2.3:3119073-3119092 None:intergenic 50.0%
TTAGCCATAAACCCACTGGG+AGG - chr2.3:3119173-3119192 MS.gene76557:intron 50.0%
! CAATAGGTTTTGCGGAGGCA+AGG - chr2.3:3120350-3120369 MS.gene76557:CDS 50.0%
AGGAAAGGCTGCTGTGGAAC+TGG - chr2.3:3120370-3120389 MS.gene76557:CDS 55.0%
AGGGCCGAGATTCAAACCCA+TGG + chr2.3:3119316-3119335 None:intergenic 55.0%
GCCATTGCAAAACCTCCCAG+TGG + chr2.3:3119188-3119207 None:intergenic 55.0%
GGAAAGGCTGCTGTGGAACT+GGG - chr2.3:3120371-3120390 MS.gene76557:CDS 55.0%
GGTGACTCTGCTGTGGATGT+GGG - chr2.3:3119088-3119107 MS.gene76557:CDS 55.0%
GTAGCAGGTAGGCAACCCAA+TGG + chr2.3:3120055-3120074 None:intergenic 55.0%
GTGACTCTGCTGTGGATGTG+GGG - chr2.3:3119089-3119108 MS.gene76557:CDS 55.0%
GTTCCGGCAATCGTGACGTT+TGG - chr2.3:3119067-3119086 MS.gene76557:CDS 55.0%
TGGGTTGCCTACCTGCTACA+AGG - chr2.3:3120056-3120075 MS.gene76557:CDS 55.0%
TGGTGACTCTGCTGTGGATG+TGG - chr2.3:3119087-3119106 MS.gene76557:CDS 55.0%
! CCCACTGGGAGGTTTTGCAA+TGG - chr2.3:3119184-3119203 MS.gene76557:intron 55.0%
! GACGTTTGGTGACTCTGCTG+TGG - chr2.3:3119081-3119100 MS.gene76557:CDS 55.0%
! GGTTTTGCGGAGGCAAGGAA+AGG - chr2.3:3120355-3120374 MS.gene76557:CDS 55.0%
GAGGCAAGGAAAGGCTGCTG+TGG - chr2.3:3120364-3120383 MS.gene76557:CDS 60.0%
GCAGGTAGGCAACCCAATGG+TGG + chr2.3:3120052-3120071 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 3118983 3120552 3118983 ID=MS.gene76557
chr2.3 mRNA 3118983 3120552 3118983 ID=MS.gene76557.t1;Parent=MS.gene76557
chr2.3 exon 3120306 3120552 3120306 ID=MS.gene76557.t1.exon1;Parent=MS.gene76557.t1
chr2.3 CDS 3120306 3120552 3120306 ID=cds.MS.gene76557.t1;Parent=MS.gene76557.t1
chr2.3 exon 3119993 3120123 3119993 ID=MS.gene76557.t1.exon2;Parent=MS.gene76557.t1
chr2.3 CDS 3119993 3120123 3119993 ID=cds.MS.gene76557.t1;Parent=MS.gene76557.t1
chr2.3 exon 3119686 3119919 3119686 ID=MS.gene76557.t1.exon3;Parent=MS.gene76557.t1
chr2.3 CDS 3119686 3119919 3119686 ID=cds.MS.gene76557.t1;Parent=MS.gene76557.t1
chr2.3 exon 3119276 3119531 3119276 ID=MS.gene76557.t1.exon4;Parent=MS.gene76557.t1
chr2.3 CDS 3119276 3119531 3119276 ID=cds.MS.gene76557.t1;Parent=MS.gene76557.t1
chr2.3 exon 3118983 3119179 3118983 ID=MS.gene76557.t1.exon5;Parent=MS.gene76557.t1
chr2.3 CDS 3118983 3119179 3118983 ID=cds.MS.gene76557.t1;Parent=MS.gene76557.t1
Gene Sequence

>MS.gene76557

ATGAAGATGAATATTAGAGAAGCATTTTTTGTTGTGTTTGCATTTGTGTTTTTGGGATGGGGGAATGCACAAGATGATACTGTTGTTCCGGCAATCGTGACGTTTGGTGACTCTGCTGTGGATGTGGGGAACAATGACTATCTTTTCACTCTTTTTAAAGCTAACTATCCTCCTTATGGAAGAGACTTTGTTAGCCATAAACCCACTGGGAGGTTTTGCAATGGCAAATTAGCTACTGATATTACTGGTAAGAATATAAACATCAAACATGCAACTCTCTTAGCTTAGATTGTAATTTTTTTTTTAATAGGCAAAATGTTAGTATTTTCTCCATGGGTTTGAATCTCGGCCCTTTTAAGACCTTCAACACTTCTAATACTAATGTTAAACATGTAACTTTCATTCTTATTGAGTTGTTTCTTTTTGTAGCTGATACACTGGGTTTTAAGAGTTATGCACCTGCATATCTTAGCCCTCAAGCAACAGGAAAAAACCTTCTTATTGGAGCAAATTTTGCTTCAGCTGCATCTGGTTATGATGAAAAGGCTGCTATCTTGAATGTAAGTTTGTGATGAACAACGCAAACACACACTAGAAGATTCGTCTTTTTCTAACTCTTTTATTTTTTCACAGCACGCAATTCCATTGTCGCAACAGTTAAAATATTACAAGGAATACCAAAGTAAGCTTTCCAAGGTAGCTGGAAGTAAAAAGGCAGCATCAATTATTAAAGGTGCATTGTACCTATTGAGTGGTGGAAGTAGTGACTTTATCCAAAACTATTATGTCAATCCTTTAATCAACAAAGTTGTCACTCCTGATCAATATTCTGCATACCTTGTTGATACATACTCAAGTTTTGTTAAGGTATTCTGTTGTCATTAGAAATGTTGTAATACCATATATTTATAACAATTGTACTCTTCTAAAACTTTGAAATATATCATAAGTATTATTTTCTATAACCATACCACATCGTTACAAATAAAACCATTTAAAGTTGCTTTGTTTTTTAACACAGGACTTGTATAAATTGGGAGCTAGAAAAATTGGAGTGACTTCACTACCACCATTGGGTTGCCTACCTGCTACAAGGACTTTGTTTGGATTCCATGAGAAAGGTTGTGTCACCAGAATCAACAATGATGCACAAGGATTTAACAAGAAAATCAACTCGGCTACAGCGAAACTCCAAAAGCAACTTCCTGGTCTTAAGATTGTTGTCTTTAATATTTACAAACCTCTCTATGAACTTGTTCAATCCCCTTCAAAATTTGGTAAGCAATACTTTTACTAGAATAACATATGATATTCATTTCTCTCTGTAAAAGAATGTTACTTATTCTCGTAATCTATCTTGTGACATTCAATAGGTTTTGCGGAGGCAAGGAAAGGCTGCTGTGGAACTGGGATTGTAGAGACGACATCCTTATTGTGCAATCAAAAGTCACCAGGAACCTGTTCTAATGCAACTCAGTATGTGTTTTGGGACAGTGTTCATCCTTCAGAAGCTGCTAACCAAGTTCTAGCTGATGCATTGATTGAACAAGGCATAAGCCTTATCGGTTAA

Protein sequence

>MS.gene76557.t1

MKMNIREAFFVVFAFVFLGWGNAQDDTVVPAIVTFGDSAVDVGNNDYLFTLFKANYPPYGRDFVSHKPTGRFCNGKLATDITADTLGFKSYAPAYLSPQATGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLKYYKEYQSKLSKVAGSKKAASIIKGALYLLSGGSSDFIQNYYVNPLINKVVTPDQYSAYLVDTYSSFVKDLYKLGARKIGVTSLPPLGCLPATRTLFGFHEKGCVTRINNDAQGFNKKINSATAKLQKQLPGLKIVVFNIYKPLYELVQSPSKFGFAEARKGCCGTGIVETTSLLCNQKSPGTCSNATQYVFWDSVHPSEAANQVLADALIEQGISLIG