Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95008.t1 | XP_013467142.1 | 99.3 | 286 | 2 | 0 | 1 | 286 | 163 | 448 | 2.70E-164 | 587.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95008.t1 | Q8GS60 | 86.4 | 286 | 39 | 0 | 1 | 286 | 177 | 462 | 1.2e-147 | 523.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95008.t1 | A0A072VIA1 | 99.3 | 286 | 2 | 0 | 1 | 286 | 163 | 448 | 2.0e-164 | 587.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene95008 | 0.814436 | 1.54E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene95008 | 0.82252 | 2.27E-53 | -1.69E-46 |
| MS.gene049369 | MS.gene95008 | 0.857197 | 1.92E-62 | -1.69E-46 |
| MS.gene049396 | MS.gene95008 | 0.813615 | 2.34E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene95008 | 0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene95008 | 0.84368 | 1.21E-58 | -1.69E-46 |
| MS.gene049805 | MS.gene95008 | 0.818454 | 1.94E-52 | -1.69E-46 |
| MS.gene050499 | MS.gene95008 | 0.819289 | 1.26E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene95008 | 0.853613 | 2.13E-61 | -1.69E-46 |
| MS.gene050593 | MS.gene95008 | 0.815085 | 1.11E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene95008 | 0.836372 | 9.73E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene95008 | 0.846771 | 1.76E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene95008 | 0.836504 | 9.00E-57 | -1.69E-46 |
| MS.gene050950 | MS.gene95008 | 0.85958 | 3.75E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene95008 | 0.870785 | 1.12E-66 | -1.69E-46 |
| MS.gene051387 | MS.gene95008 | 0.818467 | 1.93E-52 | -1.69E-46 |
| MS.gene051605 | MS.gene95008 | 0.802698 | 4.96E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene95008 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene95008 | 0.801187 | 1.01E-48 | -1.69E-46 |
| MS.gene051838 | MS.gene95008 | 0.816538 | 5.25E-52 | -1.69E-46 |
| MS.gene051858 | MS.gene95008 | 0.805756 | 1.14E-49 | -1.69E-46 |
| MS.gene052136 | MS.gene95008 | 0.804933 | 1.70E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene95008 | 0.807285 | 5.45E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene95008 | 0.837861 | 4.05E-57 | -1.69E-46 |
| MS.gene052346 | MS.gene95008 | 0.817814 | 2.71E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene95008 | 0.838839 | 2.27E-57 | -1.69E-46 |
| MS.gene052421 | MS.gene95008 | 0.830162 | 3.43E-55 | -1.69E-46 |
| MS.gene052481 | MS.gene95008 | 0.80298 | 4.34E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene95008 | 0.815545 | 8.75E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene95008 | 0.8211 | 4.83E-53 | -1.69E-46 |
| MS.gene052501 | MS.gene95008 | 0.814555 | 1.45E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene95008 | 0.821133 | 4.75E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene95008 | 0.852965 | 3.26E-61 | -1.69E-46 |
| MS.gene052813 | MS.gene95008 | 0.810943 | 8.96E-51 | -1.69E-46 |
| MS.gene052870 | MS.gene95008 | 0.815509 | 8.92E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene95008 | 0.814319 | 1.64E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene95008 | 0.846778 | 1.75E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene95008 | 0.8079 | 4.03E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene95008 | 0.829602 | 4.70E-55 | -1.69E-46 |
| MS.gene053286 | MS.gene95008 | 0.821358 | 4.21E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene95008 | 0.860681 | 1.74E-63 | -1.69E-46 |
| MS.gene053758 | MS.gene95008 | 0.838887 | 2.20E-57 | -1.69E-46 |
| MS.gene053824 | MS.gene95008 | 0.808652 | 2.79E-50 | -1.69E-46 |
| MS.gene054107 | MS.gene95008 | 0.803326 | 3.68E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene95008 | 0.848057 | 7.81E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene95008 | 0.839052 | 2.00E-57 | -1.69E-46 |
| MS.gene05505 | MS.gene95008 | 0.858028 | 1.09E-62 | -1.69E-46 |
| MS.gene055116 | MS.gene95008 | 0.821203 | 4.57E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene95008 | 0.835499 | 1.62E-56 | -1.69E-46 |
| MS.gene055289 | MS.gene95008 | 0.830122 | 3.51E-55 | -1.69E-46 |
| MS.gene055369 | MS.gene95008 | 0.818548 | 1.85E-52 | -1.69E-46 |
| MS.gene055412 | MS.gene95008 | 0.815977 | 7.01E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene95008 | 0.807683 | 4.48E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene95008 | 0.853469 | 2.34E-61 | -1.69E-46 |
| MS.gene055744 | MS.gene95008 | 0.853056 | 3.07E-61 | -1.69E-46 |
| MS.gene055909 | MS.gene95008 | 0.835026 | 2.13E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene95008 | 0.831727 | 1.42E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene95008 | 0.808938 | 2.42E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene95008 | 0.816258 | 6.07E-52 | -1.69E-46 |
| MS.gene056448 | MS.gene95008 | 0.81266 | 3.79E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene95008 | 0.837513 | 4.97E-57 | -1.69E-46 |
| MS.gene056659 | MS.gene95008 | 0.848704 | 5.17E-60 | -1.69E-46 |
| MS.gene05666 | MS.gene95008 | 0.810109 | 1.36E-50 | -1.69E-46 |
| MS.gene056782 | MS.gene95008 | 0.81858 | 1.82E-52 | -1.69E-46 |
| MS.gene056897 | MS.gene95008 | 0.824393 | 8.27E-54 | -1.69E-46 |
| MS.gene056947 | MS.gene95008 | 0.806279 | 8.89E-50 | -1.69E-46 |
| MS.gene057048 | MS.gene95008 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene95008 | 0.859583 | 3.74E-63 | -1.69E-46 |
| MS.gene057124 | MS.gene95008 | 0.85074 | 1.40E-60 | -1.69E-46 |
| MS.gene057734 | MS.gene95008 | 0.801993 | 6.93E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene95008 | 0.833693 | 4.61E-56 | -1.69E-46 |
| MS.gene058090 | MS.gene95008 | 0.808239 | 3.42E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene95008 | 0.826144 | 3.19E-54 | -1.69E-46 |
| MS.gene058130 | MS.gene95008 | 0.89953 | 1.81E-77 | -1.69E-46 |
| MS.gene058323 | MS.gene95008 | 0.807626 | 4.61E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene95008 | 0.834522 | 2.86E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene95008 | 0.836206 | 1.07E-56 | -1.69E-46 |
| MS.gene058444 | MS.gene95008 | 0.804347 | 2.26E-49 | -1.69E-46 |
| MS.gene058700 | MS.gene95008 | 0.825749 | 3.96E-54 | -1.69E-46 |
| MS.gene05883 | MS.gene95008 | 0.802456 | 5.56E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene95008 | 0.817949 | 2.53E-52 | -1.69E-46 |
| MS.gene058948 | MS.gene95008 | 0.857004 | 2.19E-62 | -1.69E-46 |
| MS.gene059023 | MS.gene95008 | 0.807309 | 5.38E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene95008 | 0.817852 | 2.66E-52 | -1.69E-46 |
| MS.gene059368 | MS.gene95008 | 0.801476 | 8.84E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene95008 | 0.822472 | 2.33E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene95008 | 0.819062 | 1.41E-52 | -1.69E-46 |
| MS.gene059688 | MS.gene95008 | 0.842496 | 2.50E-58 | -1.69E-46 |
| MS.gene059692 | MS.gene95008 | 0.821762 | 3.40E-53 | -1.69E-46 |
| MS.gene059695 | MS.gene95008 | 0.824066 | 9.87E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene95008 | 0.81462 | 1.40E-51 | -1.69E-46 |
| MS.gene059807 | MS.gene95008 | 0.808158 | 3.55E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene95008 | 0.806791 | 6.93E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene95008 | 0.808535 | 2.95E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene95008 | 0.835792 | 1.36E-56 | -1.69E-46 |
| MS.gene060835 | MS.gene95008 | 0.836178 | 1.09E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene95008 | 0.849011 | 4.25E-60 | -1.69E-46 |
| MS.gene06092 | MS.gene95008 | 0.810445 | 1.15E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene95008 | 0.839852 | 1.24E-57 | -1.69E-46 |
| MS.gene061154 | MS.gene95008 | 0.838538 | 2.71E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95008.t1 | MTR_1g046250 | 99.301 | 286 | 2 | 0 | 1 | 286 | 163 | 448 | 0.0 | 596 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95008.t1 | AT1G04620 | 86.364 | 286 | 39 | 0 | 1 | 286 | 177 | 462 | 0.0 | 530 |
Find 63 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGGTTTCCAACAAATTT+TGG | 0.060069 | 1.1:+29257620 | None:intergenic |
| ATTTATACGTAAACCGGATA+TGG | 0.201591 | 1.1:-29257406 | MS.gene95008:CDS |
| TGTGGAGCACCACTTGAATT+TGG | 0.214139 | 1.1:-29260035 | MS.gene95008:CDS |
| TCATAATGGAGAACTGTTTC+AGG | 0.214817 | 1.1:+29259832 | None:intergenic |
| ATGCTGATTCCGGAATATTT+TGG | 0.236876 | 1.1:+29258403 | None:intergenic |
| GGACTTGGTCGTTGGATATA+TGG | 0.270258 | 1.1:-29258431 | MS.gene95008:CDS |
| GCTGATGATAAAGCTAAATT+TGG | 0.271815 | 1.1:-29258021 | MS.gene95008:intron |
| CTGTCTCCCAGCAAATGATT+TGG | 0.288560 | 1.1:-29258809 | MS.gene95008:CDS |
| CAACAAGCGCAAGGGTATTA+AGG | 0.316182 | 1.1:+29261352 | None:intergenic |
| GCAGGTTCACTTGAAGCATT+TGG | 0.351862 | 1.1:-29258942 | MS.gene95008:intron |
| ACCTTTCCTTTCCCCATATC+CGG | 0.379150 | 1.1:+29257393 | None:intergenic |
| CAGCCTGCCCCAAAATTTGT+TGG | 0.382744 | 1.1:-29257629 | MS.gene95008:CDS |
| AATCTTGCATAAACTCATAA+TGG | 0.386967 | 1.1:+29259818 | None:intergenic |
| TTTCTGTGGTGTAGGTTGCC+AGG | 0.407229 | 1.1:-29260172 | MS.gene95008:CDS |
| ACATCAACCAAATCATTTGC+TGG | 0.410174 | 1.1:+29258802 | None:intergenic |
| GGAACTATTTATACGTAAAC+CGG | 0.411362 | 1.1:-29257412 | MS.gene95008:CDS |
| TTTATACGTAAACCGGATAT+GGG | 0.418788 | 1.1:-29257405 | MS.gene95008:CDS |
| TAAATTGTTGCAGGGCTGAT+AGG | 0.421045 | 1.1:-29257299 | MS.gene95008:intron |
| CGTGCAAATTCAATGCCCTT+TGG | 0.430479 | 1.1:+29257461 | None:intergenic |
| ATGTTGTGTCATGCTGATTC+CGG | 0.431412 | 1.1:+29258393 | None:intergenic |
| GACTTGGTCGTTGGATATAT+GGG | 0.435737 | 1.1:-29258430 | MS.gene95008:CDS |
| TTTGCTGGGAGACAGAAATA+AGG | 0.436430 | 1.1:+29258817 | None:intergenic |
| CGCTTGATTATCATACCATT+CGG | 0.443793 | 1.1:-29257433 | MS.gene95008:CDS |
| ATGGGCGTGCCAAAATATTC+CGG | 0.444128 | 1.1:-29258412 | MS.gene95008:CDS |
| TTATTGCTCCGTCTTGCTAC+AGG | 0.450685 | 1.1:-29258780 | MS.gene95008:intron |
| CAATGGAACCAGGGAAGGAC+TGG | 0.454699 | 1.1:-29259884 | MS.gene95008:CDS |
| ATTTGTCATGGAGACTGTTA+AGG | 0.468608 | 1.1:-29258043 | MS.gene95008:CDS |
| TGAGTTTATGCAAGATTACA+AGG | 0.484461 | 1.1:-29259812 | MS.gene95008:intron |
| AAACTTATCCAGTCCTTCCC+TGG | 0.487043 | 1.1:+29259876 | None:intergenic |
| TATGTTCAGGTTGGTCCAAA+GGG | 0.488373 | 1.1:-29257476 | MS.gene95008:intron |
| TAACTTACTGAATTAACTGT+TGG | 0.494896 | 1.1:+29258149 | None:intergenic |
| TTTCATCATTGACAGGCTGC+AGG | 0.502477 | 1.1:-29260210 | MS.gene95008:intron |
| CTATGTTCAGGTTGGTCCAA+AGG | 0.510081 | 1.1:-29257477 | MS.gene95008:intron |
| CATAATGGAGAACTGTTTCA+GGG | 0.520042 | 1.1:+29259833 | None:intergenic |
| AGCGCAAGGGTATTAAGGTT+AGG | 0.527839 | 1.1:+29261357 | None:intergenic |
| TTAACAGTCTCCATGACAAA+TGG | 0.534122 | 1.1:+29258045 | None:intergenic |
| TAATACCCTTGCGCTTGTTG+AGG | 0.535155 | 1.1:-29261349 | MS.gene95008:intron |
| CATCAACCAAATCATTTGCT+GGG | 0.539146 | 1.1:+29258803 | None:intergenic |
| ATCCACAATATATTACTGTC+AGG | 0.540157 | 1.1:-29258372 | MS.gene95008:intron |
| CGACAGTGGACAATGGAACC+AGG | 0.543521 | 1.1:-29259894 | MS.gene95008:intron |
| TTAAGGTTAGGAGATAATGT+TGG | 0.544648 | 1.1:+29261369 | None:intergenic |
| TTCATATGCTAAGAAAATTG+TGG | 0.556041 | 1.1:-29257268 | MS.gene95008:CDS |
| GAAGAAGTGATGGCTGCTAA+AGG | 0.556856 | 1.1:-29261399 | None:intergenic |
| GGTGTAGGTTGCCAGGTCCA+AGG | 0.559413 | 1.1:-29260165 | MS.gene95008:intron |
| TACCTGACAGTAATATATTG+TGG | 0.560089 | 1.1:+29258370 | None:intergenic |
| CAGTAGTGGTACCTTGGACC+TGG | 0.564696 | 1.1:+29260154 | None:intergenic |
| CGTAAACCGGATATGGGGAA+AGG | 0.578319 | 1.1:-29257399 | MS.gene95008:CDS |
| AATTGCAGCATTAAGATCTG+TGG | 0.579563 | 1.1:-29260053 | MS.gene95008:intron |
| CACAAACCTCAACAAGCGCA+AGG | 0.579807 | 1.1:+29261343 | None:intergenic |
| TACGTATAAATAGTTCCGAA+TGG | 0.593464 | 1.1:+29257418 | None:intergenic |
| CCTTATTCGACAGTGGACAA+TGG | 0.600320 | 1.1:-29259901 | MS.gene95008:intron |
| GGATAGGCGACCATTTGTCA+TGG | 0.606587 | 1.1:-29258055 | MS.gene95008:CDS |
| ACAAATAACCTGTAGCAAGA+CGG | 0.610362 | 1.1:+29258772 | None:intergenic |
| TTTGGACGGTCGTATTGAAG+AGG | 0.610876 | 1.1:-29258924 | MS.gene95008:intron |
| GTTCACTTGAAGCATTTGGA+CGG | 0.611001 | 1.1:-29258938 | MS.gene95008:CDS |
| GTGGACAATGGAACCAGGGA+AGG | 0.613783 | 1.1:-29259889 | MS.gene95008:CDS |
| ACCGGATATGGGGAAAGGAA+AGG | 0.620649 | 1.1:-29257394 | MS.gene95008:intron |
| TTATACGTAAACCGGATATG+GGG | 0.631884 | 1.1:-29257404 | MS.gene95008:CDS |
| AGAGCTTATCCAAATTCAAG+TGG | 0.635776 | 1.1:+29260026 | None:intergenic |
| ACAAACCTCAACAAGCGCAA+GGG | 0.656935 | 1.1:+29261344 | None:intergenic |
| GACAGTGGACAATGGAACCA+GGG | 0.676637 | 1.1:-29259893 | MS.gene95008:intron |
| ATAATGGAGAACTGTTTCAG+GGG | 0.681913 | 1.1:+29259834 | None:intergenic |
| TGAAACGACAGGAATGAACG+TGG | 0.713648 | 1.1:-29258215 | MS.gene95008:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTAATATATTACCAAAAA+AGG | - | chr1.1:29258223-29258242 | MS.gene95008:intron | 15.0% |
| !! | ATAAATTTATCTATTCATTC+AGG | - | chr1.1:29257376-29257395 | MS.gene95008:intron | 15.0% |
| !!! | AACTGATTCATTTAAAATAA+TGG | - | chr1.1:29259429-29259448 | MS.gene95008:intron | 15.0% |
| !!! | ATATTTTCTTTTTGATGAAA+TGG | - | chr1.1:29260813-29260832 | MS.gene95008:intron | 15.0% |
| !!! | ATTATTTTAAATGAATCAGT+TGG | + | chr1.1:29259430-29259449 | None:intergenic | 15.0% |
| !!! | TATTTTTTCAAGAGAAAAAA+GGG | - | chr1.1:29259166-29259185 | MS.gene95008:intron | 15.0% |
| !!! | TTTTTACTAAATTTGGTAAA+TGG | - | chr1.1:29261015-29261034 | MS.gene95008:intron | 15.0% |
| !! | AAAACTATCACTTTATTAGA+TGG | - | chr1.1:29260141-29260160 | MS.gene95008:intron | 20.0% |
| !! | AAATAGAGAAAAGATACTTA+AGG | + | chr1.1:29260888-29260907 | None:intergenic | 20.0% |
| !! | AATAAGTAGAAAACAACTTA+TGG | + | chr1.1:29258943-29258962 | None:intergenic | 20.0% |
| !! | AATTTAGTAAAAATGCAATC+AGG | + | chr1.1:29261008-29261027 | None:intergenic | 20.0% |
| !! | ATTAAATGTAAGTGTAAAAC+TGG | - | chr1.1:29258293-29258312 | MS.gene95008:intron | 20.0% |
| !! | ATTGAATCAATAAAATCTAC+AGG | - | chr1.1:29257755-29257774 | MS.gene95008:intron | 20.0% |
| !! | GAATTATTTGTGTATACTAT+AGG | - | chr1.1:29257514-29257533 | MS.gene95008:intron | 20.0% |
| !! | GTCATACAATGAATATAAAA+AGG | + | chr1.1:29258372-29258391 | None:intergenic | 20.0% |
| !! | TACATTTATCAAGTTATCAA+TGG | + | chr1.1:29261057-29261076 | None:intergenic | 20.0% |
| !! | TATGCAAGATGATTTATTTA+TGG | - | chr1.1:29261237-29261256 | MS.gene95008:intron | 20.0% |
| !! | TCAAATAAACTAATTCAAAC+AGG | + | chr1.1:29258853-29258872 | None:intergenic | 20.0% |
| !!! | ACAATATCTGAAATAGAAAA+TGG | + | chr1.1:29258340-29258359 | None:intergenic | 20.0% |
| !!! | GATTGCATTTTTACTAAATT+TGG | - | chr1.1:29261008-29261027 | MS.gene95008:intron | 20.0% |
| !!! | GTAATATATTAAGTTCTAAC+TGG | + | chr1.1:29258217-29258236 | None:intergenic | 20.0% |
| !!! | GTATTTTTTCAAGAGAAAAA+AGG | - | chr1.1:29259165-29259184 | MS.gene95008:intron | 20.0% |
| !!! | TAGTGATTTTTTTTGTTTCT+TGG | - | chr1.1:29261099-29261118 | MS.gene95008:intron | 20.0% |
| !!! | TGAACAACTTTTTTTTTTGA+AGG | + | chr1.1:29257962-29257981 | None:intergenic | 20.0% |
| !!! | TGTAGATTTTATTGATTCAA+TGG | + | chr1.1:29257756-29257775 | None:intergenic | 20.0% |
| !!! | TTTTAAATTTTGACTTGAAC+AGG | - | chr1.1:29259766-29259785 | MS.gene95008:intron | 20.0% |
| !!! | TTTTATCATGAAAAAACTGA+TGG | + | chr1.1:29260123-29260142 | None:intergenic | 20.0% |
| ! | AAATGTTTCTTGAAGGAATA+TGG | - | chr1.1:29260336-29260355 | MS.gene95008:intron | 25.0% |
| ! | AACTAAGTGCTTATAGTATA+AGG | + | chr1.1:29259081-29259100 | None:intergenic | 25.0% |
| ! | AATCTTGCATAAACTCATAA+TGG | + | chr1.1:29258793-29258812 | None:intergenic | 25.0% |
| ! | ACTAAGTGCTTATAGTATAA+GGG | + | chr1.1:29259080-29259099 | None:intergenic | 25.0% |
| ! | AGAATGAACAATTTGTATAC+AGG | + | chr1.1:29260090-29260109 | None:intergenic | 25.0% |
| ! | ATGTATTAAGAAGATGAGAT+GGG | - | chr1.1:29259143-29259162 | MS.gene95008:intron | 25.0% |
| ! | CCATGGAATAGTAAAATAAA+GGG | + | chr1.1:29259720-29259739 | None:intergenic | 25.0% |
| ! | CTTATAATGTGAAACATGAT+AGG | - | chr1.1:29257463-29257482 | MS.gene95008:CDS | 25.0% |
| ! | GTGTATAATAACTCAATCAT+TGG | + | chr1.1:29258188-29258207 | None:intergenic | 25.0% |
| ! | TAACTTACTGAATTAACTGT+TGG | + | chr1.1:29260462-29260481 | None:intergenic | 25.0% |
| ! | TAGATTACGGAAATTGTTTA+TGG | - | chr1.1:29258981-29259000 | MS.gene95008:intron | 25.0% |
| ! | TAGATTCAATTGGTTAAATG+TGG | - | chr1.1:29259230-29259249 | MS.gene95008:intron | 25.0% |
| ! | TCAGGCAATGTAATATAAAT+TGG | - | chr1.1:29259391-29259410 | MS.gene95008:intron | 25.0% |
| ! | TCCATGGAATAGTAAAATAA+AGG | + | chr1.1:29259721-29259740 | None:intergenic | 25.0% |
| ! | TCTGAACCAAAAAATAAAAC+TGG | - | chr1.1:29258139-29258158 | MS.gene95008:intron | 25.0% |
| ! | TTAGTTAGAGTAGATTCAAT+TGG | - | chr1.1:29259220-29259239 | MS.gene95008:intron | 25.0% |
| ! | TTCATATGCTAAGAAAATTG+TGG | - | chr1.1:29261340-29261359 | MS.gene95008:intron | 25.0% |
| ! | TTGAAACATAAATTGTTGCA+GGG | - | chr1.1:29261301-29261320 | MS.gene95008:intron | 25.0% |
| !! | ACAATTTTCTTAGCATATGA+AGG | + | chr1.1:29261341-29261360 | None:intergenic | 25.0% |
| !! | CTGAAAACTCATGTTTTATA+AGG | - | chr1.1:29258826-29258845 | MS.gene95008:intron | 25.0% |
| !! | TAAAATAACATTTTGCGAAG+AGG | - | chr1.1:29259317-29259336 | MS.gene95008:intron | 25.0% |
| !! | TATTTTTCTTTGTGAATCCA+TGG | + | chr1.1:29259737-29259756 | None:intergenic | 25.0% |
| !! | TTAGATGGTGTAATATTTTC+AGG | - | chr1.1:29260156-29260175 | MS.gene95008:intron | 25.0% |
| !!! | ATTCTTTGTGATGTTTTGTT+AGG | + | chr1.1:29257829-29257848 | None:intergenic | 25.0% |
| !!! | GATATTTGATTATTTTTCCG+TGG | - | chr1.1:29260924-29260943 | MS.gene95008:intron | 25.0% |
| !!! | TCTCTTCCAGTTTTATTTTT+TGG | + | chr1.1:29258148-29258167 | None:intergenic | 25.0% |
| !!! | TTGCAATGTTTTGATTATGT+TGG | - | chr1.1:29258662-29258681 | MS.gene95008:intron | 25.0% |
| AAAGCTAAATTTGGTATGCT+TGG | - | chr1.1:29260596-29260615 | MS.gene95008:intron | 30.0% | |
| AATACATTGTGGTAGTACTA+AGG | + | chr1.1:29259369-29259388 | None:intergenic | 30.0% | |
| AGAAAATTGCATTGTGTGAA+TGG | - | chr1.1:29259280-29259299 | MS.gene95008:intron | 30.0% | |
| AGAATAAACCTTTACAGTAG+TGG | + | chr1.1:29258471-29258490 | None:intergenic | 30.0% | |
| AGTAAGGCAATATATAACCT+TGG | + | chr1.1:29259624-29259643 | None:intergenic | 30.0% | |
| ATAAAGCATATGTGAACATG+AGG | + | chr1.1:29260788-29260807 | None:intergenic | 30.0% | |
| ATCCACAATATATTACTGTC+AGG | - | chr1.1:29260236-29260255 | MS.gene95008:intron | 30.0% | |
| ATGAGTGCAACAAAAAATGA+AGG | + | chr1.1:29259917-29259936 | None:intergenic | 30.0% | |
| ATGCTTCCTATTATCTCTAA+GGG | + | chr1.1:29257660-29257679 | None:intergenic | 30.0% | |
| ATTCAAGTATTTGACCTTGT+TGG | + | chr1.1:29258091-29258110 | None:intergenic | 30.0% | |
| ATTGGAGTTCTCAAATATAG+TGG | + | chr1.1:29260760-29260779 | None:intergenic | 30.0% | |
| CTACATTTAGTACTTCAATC+TGG | - | chr1.1:29260688-29260707 | MS.gene95008:intron | 30.0% | |
| CTTTGAATTTCATCATTGAC+AGG | - | chr1.1:29258391-29258410 | MS.gene95008:CDS | 30.0% | |
| GACACATTCTCTAACAAAAA+GGG | + | chr1.1:29257294-29257313 | None:intergenic | 30.0% | |
| GATACTTAAGGTAAAAACCA+TGG | + | chr1.1:29260876-29260895 | None:intergenic | 30.0% | |
| GATGTATTAAGAAGATGAGA+TGG | - | chr1.1:29259142-29259161 | MS.gene95008:intron | 30.0% | |
| GCTGATGATAAAGCTAAATT+TGG | - | chr1.1:29260587-29260606 | MS.gene95008:intron | 30.0% | |
| GGTTAAATGTGGAGAAATAA+GGG | - | chr1.1:29259241-29259260 | MS.gene95008:intron | 30.0% | |
| GTGGAAATGTACAACAAAAA+TGG | - | chr1.1:29261359-29261378 | MS.gene95008:CDS | 30.0% | |
| GTTGAAACATAAATTGTTGC+AGG | - | chr1.1:29261300-29261319 | MS.gene95008:intron | 30.0% | |
| GTTTAAACAGAAACTGAGTA+AGG | + | chr1.1:29259640-29259659 | None:intergenic | 30.0% | |
| TACAATATAACCAGTCACAA+TGG | + | chr1.1:29258517-29258536 | None:intergenic | 30.0% | |
| TACCTGACAGTAATATATTG+TGG | + | chr1.1:29260241-29260260 | None:intergenic | 30.0% | |
| TACGTATAAATAGTTCCGAA+TGG | + | chr1.1:29261193-29261212 | None:intergenic | 30.0% | |
| TATAAGACGTTTCGTTCAAA+TGG | - | chr1.1:29257409-29257428 | MS.gene95008:CDS | 30.0% | |
| TATGCTTCCTATTATCTCTA+AGG | + | chr1.1:29257661-29257680 | None:intergenic | 30.0% | |
| TGACACATTCTCTAACAAAA+AGG | + | chr1.1:29257295-29257314 | None:intergenic | 30.0% | |
| TGAGTTTATGCAAGATTACA+AGG | - | chr1.1:29258796-29258815 | MS.gene95008:CDS | 30.0% | |
| TGATTAAATCAGACATTCCA+CGG | + | chr1.1:29260944-29260963 | None:intergenic | 30.0% | |
| TGGTTAAATGTGGAGAAATA+AGG | - | chr1.1:29259240-29259259 | MS.gene95008:intron | 30.0% | |
| TTAAGGTTAGGAGATAATGT+TGG | + | chr1.1:29257242-29257261 | None:intergenic | 30.0% | |
| TTAGTACTACCACAATGTAT+TGG | - | chr1.1:29259368-29259387 | MS.gene95008:intron | 30.0% | |
| ! | AAATGGATTTATCTCTCCAT+GGG | - | chr1.1:29260830-29260849 | MS.gene95008:intron | 30.0% |
| ! | ACAATGTTATTGATTGCGAA+TGG | + | chr1.1:29259587-29259606 | None:intergenic | 30.0% |
| ! | ACATCACAAAGAATGTTTTC+AGG | - | chr1.1:29257835-29257854 | MS.gene95008:intron | 30.0% |
| ! | ACTTTTCGCTGTATTATTCA+GGG | - | chr1.1:29260530-29260549 | MS.gene95008:intron | 30.0% |
| ! | ATCAGGTTTCCAACAAATTT+TGG | + | chr1.1:29260991-29261010 | None:intergenic | 30.0% |
| ! | ATGTGAAGTTTAACTTACCA+TGG | - | chr1.1:29260856-29260875 | MS.gene95008:intron | 30.0% |
| ! | CAGATTGAAGTACTAAATGT+AGG | + | chr1.1:29260690-29260709 | None:intergenic | 30.0% |
| ! | GCTTAAAACTGCAGATTTTT+GGG | - | chr1.1:29259545-29259564 | MS.gene95008:intron | 30.0% |
| ! | TATTTTGTTCTTGAAACGAC+AGG | - | chr1.1:29260382-29260401 | MS.gene95008:intron | 30.0% |
| ! | TCAGGTTTCCAACAAATTTT+GGG | + | chr1.1:29260990-29261009 | None:intergenic | 30.0% |
| ! | TGTGTTTAGAATCACAAGTT+TGG | - | chr1.1:29259867-29259886 | MS.gene95008:CDS | 30.0% |
| ! | TTGGATAAGCTCTATGTTTT+AGG | - | chr1.1:29258592-29258611 | MS.gene95008:intron | 30.0% |
| !! | GTTATTTCTCTGACTCTTAA+AGG | - | chr1.1:29258015-29258034 | MS.gene95008:intron | 30.0% |
| !! | TATGTTTTAGGCACAAATTG+TGG | - | chr1.1:29258604-29258623 | MS.gene95008:intron | 30.0% |
| !!! | AGCTGTTTTGACTATACAAA+TGG | - | chr1.1:29259962-29259981 | MS.gene95008:intron | 30.0% |
| !!! | AGTTACTGAATGACCTTTTT+TGG | + | chr1.1:29258239-29258258 | None:intergenic | 30.0% |
| !!! | AGTTGTTCATTGTTTTGAAC+TGG | - | chr1.1:29257973-29257992 | MS.gene95008:intron | 30.0% |
| !!! | CCCTTTATTTTACTATTCCA+TGG | - | chr1.1:29259717-29259736 | MS.gene95008:intron | 30.0% |
| !!! | TCTGTTTTTGCACTTTCTTT+TGG | - | chr1.1:29260284-29260303 | MS.gene95008:intron | 30.0% |
| AAGATCGGTAAACGAATTGT+TGG | - | chr1.1:29258041-29258060 | MS.gene95008:CDS | 35.0% | |
| AATCTATCTCAGGAAGCTAA+TGG | + | chr1.1:29258967-29258986 | None:intergenic | 35.0% | |
| AATTGCAGCATTAAGATCTG+TGG | - | chr1.1:29258555-29258574 | MS.gene95008:intron | 35.0% | |
| ACAAATAACCTGTAGCAAGA+CGG | + | chr1.1:29259839-29259858 | None:intergenic | 35.0% | |
| ACATCAACCAAATCATTTGC+TGG | + | chr1.1:29259809-29259828 | None:intergenic | 35.0% | |
| AGAGCTTATCCAAATTCAAG+TGG | + | chr1.1:29258585-29258604 | None:intergenic | 35.0% | |
| ATCATTGTACTGTCGTAACT+CGG | + | chr1.1:29257906-29257925 | None:intergenic | 35.0% | |
| ATTTGTCATGGAGACTGTTA+AGG | - | chr1.1:29260565-29260584 | MS.gene95008:intron | 35.0% | |
| CAATTTCCGTAATCTATCTC+AGG | + | chr1.1:29258977-29258996 | None:intergenic | 35.0% | |
| CAGTTTCTGTTTAAACTTCC+TGG | - | chr1.1:29259644-29259663 | MS.gene95008:intron | 35.0% | |
| CATCAACCAAATCATTTGCT+GGG | + | chr1.1:29259808-29259827 | None:intergenic | 35.0% | |
| CGCTTGATTATCATACCATT+CGG | - | chr1.1:29261175-29261194 | MS.gene95008:intron | 35.0% | |
| CGTGCATAAATGTTTCTTGA+AGG | - | chr1.1:29260329-29260348 | MS.gene95008:intron | 35.0% | |
| GACTCTTAAAGGAGAAAGAT+CGG | - | chr1.1:29258026-29258045 | MS.gene95008:CDS | 35.0% | |
| GATGAAGGTTACAATTCACA+CGG | - | chr1.1:29257431-29257450 | MS.gene95008:CDS | 35.0% | |
| GTGGAATGTCTGATTTAATC+AGG | - | chr1.1:29260943-29260962 | MS.gene95008:intron | 35.0% | |
| TAGCTTCCTGAGATAGATTA+CGG | - | chr1.1:29258968-29258987 | MS.gene95008:intron | 35.0% | |
| TGTCTGATTTAATCAGGAAG+AGG | - | chr1.1:29260949-29260968 | MS.gene95008:intron | 35.0% | |
| TGTGAACATGAGGTCAAAAT+TGG | + | chr1.1:29260778-29260797 | None:intergenic | 35.0% | |
| TTAAACTTCACATTCTCCCA+TGG | + | chr1.1:29260849-29260868 | None:intergenic | 35.0% | |
| TTAACAGTCTCCATGACAAA+TGG | + | chr1.1:29260566-29260585 | None:intergenic | 35.0% | |
| TTGGTTCAGAGAATCTCTTA+CGG | + | chr1.1:29258129-29258148 | None:intergenic | 35.0% | |
| ! | ATAATGGAGAACTGTTTCAG+GGG | + | chr1.1:29258777-29258796 | None:intergenic | 35.0% |
| ! | ATGTTATTGATTGCGAATGG+TGG | + | chr1.1:29259584-29259603 | None:intergenic | 35.0% |
| ! | CAGGTTTCCAACAAATTTTG+GGG | + | chr1.1:29260989-29261008 | None:intergenic | 35.0% |
| ! | CATAATGGAGAACTGTTTCA+GGG | + | chr1.1:29258778-29258797 | None:intergenic | 35.0% |
| ! | CTCAATCATTGGTAATTGAC+AGG | + | chr1.1:29258177-29258196 | None:intergenic | 35.0% |
| ! | CTTTTCGCTGTATTATTCAG+GGG | - | chr1.1:29260531-29260550 | MS.gene95008:intron | 35.0% |
| ! | GAAAGTGCAAAAACAGACTT+AGG | + | chr1.1:29260281-29260300 | None:intergenic | 35.0% |
| ! | GAAATGGATTTATCTCTCCA+TGG | - | chr1.1:29260829-29260848 | MS.gene95008:intron | 35.0% |
| ! | GACTTTTCGCTGTATTATTC+AGG | - | chr1.1:29260529-29260548 | MS.gene95008:intron | 35.0% |
| ! | GGACAGAAACTTTTCATCAA+AGG | + | chr1.1:29259348-29259367 | None:intergenic | 35.0% |
| ! | GGCTTAAAACTGCAGATTTT+TGG | - | chr1.1:29259544-29259563 | MS.gene95008:intron | 35.0% |
| ! | TCATAATGGAGAACTGTTTC+AGG | + | chr1.1:29258779-29258798 | None:intergenic | 35.0% |
| ! | TCTGTTTTCTATGTTCAGGT+TGG | - | chr1.1:29261123-29261142 | MS.gene95008:intron | 35.0% |
| ! | TGTCTCTTGCTTTATTACCA+AGG | - | chr1.1:29259604-29259623 | MS.gene95008:intron | 35.0% |
| ! | TTCCTATTATCTCTAAGGGA+AGG | + | chr1.1:29257656-29257675 | None:intergenic | 35.0% |
| ! | TTTTCGCTGTATTATTCAGG+GGG | - | chr1.1:29260532-29260551 | MS.gene95008:intron | 35.0% |
| !! | GGTGTAATATTTTCAGGACT+TGG | - | chr1.1:29260162-29260181 | MS.gene95008:intron | 35.0% |
| !!! | ATGCTGATTCCGGAATATTT+TGG | + | chr1.1:29260208-29260227 | None:intergenic | 35.0% |
| !!! | TATCTGTTTTTTCGAGAGAG+AGG | + | chr1.1:29260508-29260527 | None:intergenic | 35.0% |
| AAATCTACAGGCGAACAATC+TGG | - | chr1.1:29257767-29257786 | MS.gene95008:intron | 40.0% | |
| AACCAGTCACAATGGAGAAA+GGG | + | chr1.1:29258509-29258528 | None:intergenic | 40.0% | |
| AACTTGTAGTGAGTCCAACA+AGG | - | chr1.1:29258074-29258093 | MS.gene95008:intron | 40.0% | |
| AGCCTTCCCTTAGAGATAAT+AGG | - | chr1.1:29257651-29257670 | MS.gene95008:intron | 40.0% | |
| ATTGCCTGACCAATACATTG+TGG | + | chr1.1:29259380-29259399 | None:intergenic | 40.0% | |
| CGTAGTAGTTAGGAACAGTT+GGG | - | chr1.1:29259193-29259212 | MS.gene95008:intron | 40.0% | |
| CGTTTCGTTCAAATGGATGA+AGG | - | chr1.1:29257416-29257435 | MS.gene95008:CDS | 40.0% | |
| CTATGTTCCTTATTCGACAG+TGG | - | chr1.1:29258700-29258719 | MS.gene95008:intron | 40.0% | |
| CTGTTGCAACAAAGTGAAGA+TGG | + | chr1.1:29261263-29261282 | None:intergenic | 40.0% | |
| GTAGTAGTTAGGAACAGTTG+GGG | - | chr1.1:29259194-29259213 | MS.gene95008:intron | 40.0% | |
| GTGGAGAAATAAGGGTAGAA+AGG | - | chr1.1:29259249-29259268 | MS.gene95008:intron | 40.0% | |
| TAAACCGCAATTGACAACAC+TGG | + | chr1.1:29260715-29260734 | None:intergenic | 40.0% | |
| TAAATTGTTGCAGGGCTGAT+AGG | - | chr1.1:29261309-29261328 | MS.gene95008:intron | 40.0% | |
| TAACCAGTCACAATGGAGAA+AGG | + | chr1.1:29258510-29258529 | None:intergenic | 40.0% | |
| TAGAAAAGTCTGAGGACAGT+TGG | + | chr1.1:29259472-29259491 | None:intergenic | 40.0% | |
| TCGTAGTAGTTAGGAACAGT+TGG | - | chr1.1:29259192-29259211 | MS.gene95008:intron | 40.0% | |
| TTCTGTTTAAACTTCCTGGC+AGG | - | chr1.1:29259648-29259667 | MS.gene95008:intron | 40.0% | |
| TTTGCTGGGAGACAGAAATA+AGG | + | chr1.1:29259794-29259813 | None:intergenic | 40.0% | |
| TTTGTATACAGGTGAGCAAG+TGG | + | chr1.1:29260079-29260098 | None:intergenic | 40.0% | |
| TTTGTTAGGATGCTGGCAAT+GGG | + | chr1.1:29257815-29257834 | None:intergenic | 40.0% | |
| ! | ACTACCACAATGTATTGGTC+AGG | - | chr1.1:29259373-29259392 | MS.gene95008:intron | 40.0% |
| ! | GACTTGGTCGTTGGATATAT+GGG | - | chr1.1:29260178-29260197 | MS.gene95008:CDS | 40.0% |
| ! | GTTCACTTGAAGCATTTGGA+CGG | - | chr1.1:29259670-29259689 | MS.gene95008:intron | 40.0% |
| ! | TTTTGTTAGGATGCTGGCAA+TGG | + | chr1.1:29257816-29257835 | None:intergenic | 40.0% |
| !! | ATGTTGTGTCATGCTGATTC+CGG | + | chr1.1:29260218-29260237 | None:intergenic | 40.0% |
| !! | CAATCTGGTTTCCCTAGTTT+TGG | - | chr1.1:29257782-29257801 | MS.gene95008:intron | 40.0% |
| !! | GTGATGTTTTGTTAGGATGC+TGG | + | chr1.1:29257822-29257841 | None:intergenic | 40.0% |
| !! | TATGTTCAGGTTGGTCCAAA+GGG | - | chr1.1:29261132-29261151 | MS.gene95008:intron | 40.0% |
| !! | TATTTTCAGGACTTGGTCGT+TGG | - | chr1.1:29260169-29260188 | MS.gene95008:CDS | 40.0% |
| !! | TGGCTCTGTTTTCTATGTTC+AGG | - | chr1.1:29261119-29261138 | MS.gene95008:intron | 40.0% |
| !!! | AGATTTTTGGGTTTCCTCCA+TGG | - | chr1.1:29259557-29259576 | MS.gene95008:intron | 40.0% |
| !!! | TTTCCAACAAATTTTGGGGC+AGG | + | chr1.1:29260985-29261004 | None:intergenic | 40.0% |
| AAACTTATCCAGTCCTTCCC+TGG | + | chr1.1:29258735-29258754 | None:intergenic | 45.0% | |
| AAAGGGAGCTCGTAGTAGTT+AGG | - | chr1.1:29259183-29259202 | MS.gene95008:intron | 45.0% | |
| AACTCAGTCGTGCTAAGTTC+TGG | + | chr1.1:29260048-29260067 | None:intergenic | 45.0% | |
| ACAAACCTCAACAAGCGCAA+GGG | + | chr1.1:29257267-29257286 | None:intergenic | 45.0% | |
| AGGCACAAATTGTGGTATGC+AGG | - | chr1.1:29258612-29258631 | MS.gene95008:intron | 45.0% | |
| ATGGGCGTGCCAAAATATTC+CGG | - | chr1.1:29260196-29260215 | MS.gene95008:CDS | 45.0% | |
| ATGGGGGATCTTCCAAAACT+AGG | + | chr1.1:29257797-29257816 | None:intergenic | 45.0% | |
| CAACCTTCACAAATAGGCCA+TGG | + | chr1.1:29259501-29259520 | None:intergenic | 45.0% | |
| CATGGCCTATTTGTGAAGGT+TGG | - | chr1.1:29259499-29259518 | MS.gene95008:intron | 45.0% | |
| CCATTGTCCACTGTCGAATA+AGG | + | chr1.1:29258710-29258729 | None:intergenic | 45.0% | |
| CCTTATTCGACAGTGGACAA+TGG | - | chr1.1:29258707-29258726 | MS.gene95008:intron | 45.0% | |
| CCTTTACAGTAGTGGTACCT+TGG | + | chr1.1:29258463-29258482 | None:intergenic | 45.0% | |
| CGTGCAAATTCAATGCCCTT+TGG | + | chr1.1:29261150-29261169 | None:intergenic | 45.0% | |
| CTGTCTCCCAGCAAATGATT+TGG | - | chr1.1:29259799-29259818 | MS.gene95008:intron | 45.0% | |
| GCTGTATTATTCAGGGGGAT+AGG | - | chr1.1:29260537-29260556 | MS.gene95008:intron | 45.0% | |
| TAAGCCATCATGTAACGCCA+TGG | + | chr1.1:29259530-29259549 | None:intergenic | 45.0% | |
| TGAAACGACAGGAATGAACG+TGG | - | chr1.1:29260393-29260412 | MS.gene95008:intron | 45.0% | |
| TGGACCAGTGTTGTCAATTG+CGG | - | chr1.1:29260708-29260727 | MS.gene95008:intron | 45.0% | |
| TGGGGGATCTTCCAAAACTA+GGG | + | chr1.1:29257796-29257815 | None:intergenic | 45.0% | |
| TTATTGCTCCGTCTTGCTAC+AGG | - | chr1.1:29259828-29259847 | MS.gene95008:CDS | 45.0% | |
| TTCATCCAAACAGAGCCCTA+GGG | - | chr1.1:29259107-29259126 | MS.gene95008:intron | 45.0% | |
| TTCCCTTTCTCCATTGTGAC+TGG | - | chr1.1:29258504-29258523 | MS.gene95008:intron | 45.0% | |
| TTGAAGGACCAGATGCTCTT+AGG | + | chr1.1:29257946-29257965 | None:intergenic | 45.0% | |
| TTGTTAGGATGCTGGCAATG+GGG | + | chr1.1:29257814-29257833 | None:intergenic | 45.0% | |
| TTTCATCATTGACAGGCTGC+AGG | - | chr1.1:29258398-29258417 | MS.gene95008:CDS | 45.0% | |
| TTTGGACGGTCGTATTGAAG+AGG | - | chr1.1:29259684-29259703 | MS.gene95008:intron | 45.0% | |
| ! | AGACTTTTCTACCACCTCCA+TGG | - | chr1.1:29259481-29259500 | MS.gene95008:intron | 45.0% |
| ! | CCAAGGTACCACTACTGTAA+AGG | - | chr1.1:29258460-29258479 | MS.gene95008:intron | 45.0% |
| ! | CGTCTTCTTTTCTGTGGTGT+AGG | - | chr1.1:29258428-29258447 | MS.gene95008:CDS | 45.0% |
| ! | GCAGGTTCACTTGAAGCATT+TGG | - | chr1.1:29259666-29259685 | MS.gene95008:intron | 45.0% |
| ! | GGACTTGGTCGTTGGATATA+TGG | - | chr1.1:29260177-29260196 | MS.gene95008:CDS | 45.0% |
| ! | GTCAAGCGTCTTCTTTTCTG+TGG | - | chr1.1:29258422-29258441 | MS.gene95008:CDS | 45.0% |
| ! | TAATACCCTTGCGCTTGTTG+AGG | - | chr1.1:29257259-29257278 | MS.gene95008:CDS | 45.0% |
| ! | TGTGGAGCACCACTTGAATT+TGG | - | chr1.1:29258573-29258592 | MS.gene95008:intron | 45.0% |
| !! | AGCGCAAGGGTATTAAGGTT+AGG | + | chr1.1:29257254-29257273 | None:intergenic | 45.0% |
| !! | CAACAAGCGCAAGGGTATTA+AGG | + | chr1.1:29257259-29257278 | None:intergenic | 45.0% |
| !! | CTATGTTCAGGTTGGTCCAA+AGG | - | chr1.1:29261131-29261150 | MS.gene95008:intron | 45.0% |
| AATGCTCTAGCGACTAGCGT+AGG | - | chr1.1:29257703-29257722 | MS.gene95008:intron | 50.0% | |
| ACTGTCGTAACTCGGACTGA+AGG | + | chr1.1:29257898-29257917 | None:intergenic | 50.0% | |
| ATCAAGCTGTGTACGCCCTA+GGG | + | chr1.1:29259125-29259144 | None:intergenic | 50.0% | |
| ATGCTTCAAGTGAACCTGCC+AGG | + | chr1.1:29259665-29259684 | None:intergenic | 50.0% | |
| CACAAACCTCAACAAGCGCA+AGG | + | chr1.1:29257268-29257287 | None:intergenic | 50.0% | |
| CAGCCTGCCCCAAAATTTGT+TGG | - | chr1.1:29260979-29260998 | MS.gene95008:intron | 50.0% | |
| CCTCCATGGCCTATTTGTGA+AGG | - | chr1.1:29259495-29259514 | MS.gene95008:intron | 50.0% | |
| CCTTCACAAATAGGCCATGG+AGG | + | chr1.1:29259498-29259517 | None:intergenic | 50.0% | |
| CGCAGCCAACCTTCACAAAT+AGG | + | chr1.1:29259507-29259526 | None:intergenic | 50.0% | |
| GACAGTGGACAATGGAACCA+GGG | - | chr1.1:29258715-29258734 | MS.gene95008:intron | 50.0% | |
| GGAGGTGGTAGAAAAGTCTG+AGG | + | chr1.1:29259480-29259499 | None:intergenic | 50.0% | |
| GGATAGGCGACCATTTGTCA+TGG | - | chr1.1:29260553-29260572 | MS.gene95008:intron | 50.0% | |
| GTTCATCCAAACAGAGCCCT+AGG | - | chr1.1:29259106-29259125 | MS.gene95008:intron | 50.0% | |
| TCACAAATAGGCCATGGAGG+TGG | + | chr1.1:29259495-29259514 | None:intergenic | 50.0% | |
| TGTTAGGATGCTGGCAATGG+GGG | + | chr1.1:29257813-29257832 | None:intergenic | 50.0% | |
| TTTCTGTGGTGTAGGTTGCC+AGG | - | chr1.1:29258436-29258455 | MS.gene95008:intron | 50.0% | |
| !! | CGACATTGCCTAAGAGCATC+TGG | - | chr1.1:29257935-29257954 | MS.gene95008:intron | 50.0% |
| !! | TGATTGCGAATGGTGGACCA+TGG | + | chr1.1:29259577-29259596 | None:intergenic | 50.0% |
| !!! | ACAAATTTTGGGGCAGGCTG+AGG | + | chr1.1:29260979-29260998 | None:intergenic | 50.0% |
| CAATGGAACCAGGGAAGGAC+TGG | - | chr1.1:29258724-29258743 | MS.gene95008:intron | 55.0% | |
| CAGTAGTGGTACCTTGGACC+TGG | + | chr1.1:29258457-29258476 | None:intergenic | 55.0% | |
| CATCAAGCTGTGTACGCCCT+AGG | + | chr1.1:29259126-29259145 | None:intergenic | 55.0% | |
| CGACAGTGGACAATGGAACC+AGG | - | chr1.1:29258714-29258733 | MS.gene95008:intron | 55.0% | |
| GTCTGAGGACAGTTGGCAAG+AGG | + | chr1.1:29259465-29259484 | None:intergenic | 55.0% | |
| GTGGACAATGGAACCAGGGA+AGG | - | chr1.1:29258719-29258738 | MS.gene95008:intron | 55.0% | |
| TGCGCCATGGCGTTACATGA+TGG | - | chr1.1:29259523-29259542 | MS.gene95008:intron | 55.0% | |
| !! | TTGCGAATGGTGGACCATGG+AGG | + | chr1.1:29259574-29259593 | None:intergenic | 55.0% |
| !!! | AATTTTGGGGCAGGCTGAGG+AGG | + | chr1.1:29260976-29260995 | None:intergenic | 55.0% |
| GGTGTAGGTTGCCAGGTCCA+AGG | - | chr1.1:29258443-29258462 | MS.gene95008:intron | 60.0% | |
| GTACGCCCTAGGGCTCTGTT+TGG | + | chr1.1:29259115-29259134 | None:intergenic | 60.0% | |
| ! | TGTGAAGGTTGGCTGCGCCA+TGG | - | chr1.1:29259510-29259529 | MS.gene95008:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 29257218 | 29261412 | 29257218 | ID=MS.gene95008 |
| chr1.1 | mRNA | 29257218 | 29261412 | 29257218 | ID=MS.gene95008.t1;Parent=MS.gene95008 |
| chr1.1 | exon | 29261350 | 29261412 | 29261350 | ID=MS.gene95008.t1.exon1;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29261350 | 29261412 | 29261350 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29260166 | 29260217 | 29260166 | ID=MS.gene95008.t1.exon2;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29260166 | 29260217 | 29260166 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29260005 | 29260067 | 29260005 | ID=MS.gene95008.t1.exon3;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29260005 | 29260067 | 29260005 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29259813 | 29259910 | 29259813 | ID=MS.gene95008.t1.exon4;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29259813 | 29259910 | 29259813 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29258925 | 29258960 | 29258925 | ID=MS.gene95008.t1.exon5;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29258925 | 29258960 | 29258925 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29258781 | 29258842 | 29258781 | ID=MS.gene95008.t1.exon6;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29258781 | 29258842 | 29258781 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29258639 | 29258666 | 29258639 | ID=MS.gene95008.t1.exon7;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29258639 | 29258666 | 29258639 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29258373 | 29258452 | 29258373 | ID=MS.gene95008.t1.exon8;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29258373 | 29258452 | 29258373 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29258157 | 29258226 | 29258157 | ID=MS.gene95008.t1.exon9;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29258157 | 29258226 | 29258157 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29258022 | 29258079 | 29258022 | ID=MS.gene95008.t1.exon10;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29258022 | 29258079 | 29258022 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29257601 | 29257665 | 29257601 | ID=MS.gene95008.t1.exon11;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29257601 | 29257665 | 29257601 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29257395 | 29257489 | 29257395 | ID=MS.gene95008.t1.exon12;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29257395 | 29257489 | 29257395 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| chr1.1 | exon | 29257218 | 29257308 | 29257218 | ID=MS.gene95008.t1.exon13;Parent=MS.gene95008.t1 |
| chr1.1 | CDS | 29257218 | 29257308 | 29257218 | ID=cds.MS.gene95008.t1;Parent=MS.gene95008.t1 |
| Gene Sequence |
| Protein sequence |
