AlfalfaGEDB | MS.gene96923

M. sativa cultivar XinJiangDaYe / MS.gene96923

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96923.t1	KEH15851.1	50.7	229	102	5	20	247	88	306	1.20E-47	200.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96923.t1	Q9FJC1	33.7	181	114	3	19	194	1	180	7.7e-14	79.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96923.t1	A0A072TFN6	50.7	229	102	5	20	247	88	306	9.0e-48	200.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene96120	MS.gene96923	PPI
MS.gene96923	MS.gene94460	PPI
MS.gene047137	MS.gene96923	PPI
MS.gene96923	MS.gene072003	PPI
MS.gene96923	MS.gene031603	PPI
MS.gene96923	MS.gene006728	PPI
MS.gene96923	MS.gene031572	PPI
MS.gene96923	MS.gene73780	PPI
MS.gene96923	MS.gene032852	PPI
MS.gene96923	MS.gene072244	PPI
MS.gene96923	MS.gene045772	PPI
MS.gene96923	MS.gene065373	PPI
MS.gene96923	MS.gene045440	PPI
MS.gene96923	MS.gene031573	PPI
MS.gene96923	MS.gene028696	PPI
MS.gene96923	MS.gene006730	PPI
MS.gene96923	MS.gene006725	PPI
MS.gene96923	MS.gene94457	PPI
MS.gene96923	MS.gene041325	PPI
MS.gene96923	MS.gene95902	PPI
MS.gene96923	MS.gene045439	PPI
MS.gene96923	MS.gene51795	PPI
MS.gene045441	MS.gene96923	PPI
MS.gene96923	MS.gene074346	PPI
MS.gene96923	MS.gene29873	PPI
MS.gene006692	MS.gene96923	PPI
MS.gene36764	MS.gene96923	PPI
MS.gene96923	MS.gene003455	PPI
MS.gene96923	MS.gene072231	PPI
MS.gene96923	MS.gene069763	PPI
MS.gene96923	MS.gene002112	PPI
MS.gene96923	MS.gene047136	PPI
MS.gene96923	MS.gene91884	PPI
MS.gene96923	MS.gene36752	PPI
MS.gene36804	MS.gene96923	PPI
MS.gene96923	MS.gene36743	PPI
MS.gene96923	MS.gene072000	PPI
MS.gene96923	MS.gene021295	PPI
MS.gene96923	MS.gene033695	PPI
MS.gene96923	MS.gene045451	PPI
MS.gene96923	MS.gene78164	PPI
MS.gene96923	MS.gene031575	PPI
MS.gene96923	MS.gene54959	PPI
MS.gene96923	MS.gene006727	PPI
MS.gene96357	MS.gene96923	PPI
MS.gene96923	MS.gene045449	PPI
MS.gene96923	MS.gene055754	PPI
MS.gene96923	MS.gene071257	PPI
MS.gene96923	MS.gene035630	PPI
MS.gene96923	MS.gene031577	PPI
MS.gene96923	MS.gene36809	PPI
MS.gene96923	MS.gene045437	PPI
MS.gene96923	MS.gene003456	PPI
MS.gene96923	MS.gene36943	PPI
MS.gene96923	MS.gene36807	PPI
MS.gene96923	MS.gene032379	PPI
MS.gene96923	MS.gene32300	PPI
MS.gene96923	MS.gene006736	PPI
MS.gene96923	MS.gene36810	PPI
MS.gene96923	MS.gene23706	PPI
MS.gene96923	MS.gene91886	PPI
MS.gene96923	MS.gene032861	PPI
MS.gene96923	MS.gene024262	PPI
MS.gene96923	MS.gene045452	PPI
MS.gene96923	MS.gene032862	PPI
MS.gene96923	MS.gene031570	PPI
MS.gene96923	MS.gene045446	PPI
MS.gene96923	MS.gene041323	PPI
MS.gene96923	MS.gene36942	PPI
MS.gene96923	MS.gene91885	PPI
MS.gene96923	MS.gene51793	PPI
MS.gene32305	MS.gene96923	PPI
MS.gene96923	MS.gene033694	PPI
MS.gene96923	MS.gene032860	PPI
MS.gene96923	MS.gene007794	PPI
MS.gene96923	MS.gene01653	PPI
MS.gene96923	MS.gene69561	PPI
MS.gene96923	MS.gene006723	PPI
MS.gene96923	MS.gene94458	PPI
MS.gene96923	MS.gene54960	PPI
MS.gene96923	MS.gene045448	PPI
MS.gene96923	MS.gene041326	PPI
MS.gene96923	MS.gene032853	PPI
MS.gene96923	MS.gene52136	PPI
MS.gene96923	MS.gene069762	PPI
MS.gene73831	MS.gene96923	PPI
MS.gene96923	MS.gene36763	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96923.t1	MTR_0492s0020	50.431	232	104	5	17	247	85	306	4.65e-62	202
MS.gene96923.t1	MTR_0492s0020	56.452	62	25	1	17	76	11	72	9.11e-12	65.5
MS.gene96923.t1	MTR_3g108150	48.536	239	109	6	16	249	11	240	9.10e-62	200
MS.gene96923.t1	MTR_0543s0010	50.431	232	104	5	17	247	85	306	1.11e-61	202
MS.gene96923.t1	MTR_0543s0010	56.452	62	25	1	17	76	11	72	9.75e-12	65.5
MS.gene96923.t1	MTR_7g088260	44.939	247	122	4	7	249	80	316	7.54e-55	184
MS.gene96923.t1	MTR_3g108560	43.220	236	122	7	15	246	17	244	2.51e-48	163
MS.gene96923.t1	MTR_3g108560	43.220	236	122	7	15	246	17	244	1.17e-47	164
MS.gene96923.t1	MTR_3g087260	49.198	187	78	4	18	202	12	183	8.39e-42	150
MS.gene96923.t1	MTR_3g110010	48.691	191	93	3	18	205	13	201	9.00e-42	153
MS.gene96923.t1	MTR_3g110010	47.328	131	64	3	129	258	216	342	2.46e-23	100
MS.gene96923.t1	MTR_3g109982	48.691	191	93	3	18	205	13	201	1.02e-41	153
MS.gene96923.t1	MTR_3g109982	47.328	131	64	3	129	258	216	342	1.32e-23	100
MS.gene96923.t1	MTR_7g056020	43.673	245	115	8	14	254	12	237	6.57e-37	139
MS.gene96923.t1	MTR_1g041245	36.250	240	135	7	18	248	11	241	3.21e-34	128
MS.gene96923.t1	MTR_7g056447	43.407	182	90	4	18	191	9	185	9.34e-34	125
MS.gene96923.t1	MTR_7g098480	36.466	266	129	8	1	255	1	237	4.25e-32	124
MS.gene96923.t1	MTR_3g036250	38.860	193	107	4	15	198	2	192	1.66e-31	120
MS.gene96923.t1	MTR_7g056433	35.319	235	139	5	10	236	4	233	1.99e-31	120
MS.gene96923.t1	MTR_3g040700	38.947	190	105	4	18	198	43	230	6.00e-30	117
MS.gene96923.t1	MTR_4g080610	36.975	238	118	4	11	248	5	210	1.79e-29	115
MS.gene96923.t1	MTR_7g098510	33.700	273	161	7	1	263	1	263	2.67e-29	115
MS.gene96923.t1	MTR_7g115270	38.384	198	107	5	17	200	11	207	1.12e-28	113
MS.gene96923.t1	MTR_3g467400	35.178	253	135	8	18	248	3	248	6.51e-28	110
MS.gene96923.t1	MTR_8g085430	37.056	197	112	3	18	202	11	207	1.08e-27	109
MS.gene96923.t1	MTR_7g098570	36.154	260	144	9	18	266	20	268	1.20e-27	111
MS.gene96923.t1	MTR_7g032380	35.294	238	129	7	18	246	11	232	1.58e-27	109
MS.gene96923.t1	MTR_3g105060	30.466	279	161	9	18	268	14	287	2.64e-27	109
MS.gene96923.t1	MTR_4g134150	40.437	183	100	4	17	196	13	189	2.92e-27	106
MS.gene96923.t1	MTR_3g023630	36.735	196	115	4	11	199	1	194	3.22e-26	106
MS.gene96923.t1	MTR_3g082890	40.000	190	104	5	15	197	14	200	5.85e-26	106
MS.gene96923.t1	MTR_3g082890	40.000	190	104	5	15	197	94	280	7.00e-26	106
MS.gene96923.t1	MTR_7g007080	32.836	268	160	8	16	269	2	263	1.16e-24	102
MS.gene96923.t1	MTR_7g032370	39.227	181	98	4	30	202	2	178	2.36e-24	100
MS.gene96923.t1	MTR_7g033990	36.214	243	135	8	18	248	11	245	4.85e-24	100
MS.gene96923.t1	MTR_7g056420	36.898	187	93	3	17	202	8	170	5.75e-23	99.4
MS.gene96923.t1	MTR_7g056430	36.898	187	93	3	17	202	8	170	7.02e-23	99.0
MS.gene96923.t1	MTR_7g114710	38.043	184	109	4	18	196	13	196	3.49e-22	95.1
MS.gene96923.t1	MTR_5g008920	36.364	198	114	6	10	200	4	196	7.65e-22	94.4
MS.gene96923.t1	MTR_7g034115	37.500	184	106	4	18	194	11	192	1.40e-20	90.9
MS.gene96923.t1	MTR_7g060470	34.518	197	113	4	17	201	2	194	2.51e-20	90.5
MS.gene96923.t1	MTR_7g034110	36.585	205	106	7	18	207	11	206	2.92e-20	89.7
MS.gene96923.t1	MTR_3g107100	28.897	263	147	7	9	248	2	247	1.58e-19	88.2
MS.gene96923.t1	MTR_7g033945	35.366	164	93	2	18	170	11	172	2.47e-19	84.0
MS.gene96923.t1	MTR_4g039440	31.250	240	145	6	18	246	34	264	3.47e-19	87.4
MS.gene96923.t1	MTR_6g044560	30.897	301	167	9	12	275	172	468	6.46e-19	87.0
MS.gene96923.t1	MTR_6g044572	31.186	295	162	9	18	275	2	292	6.48e-19	86.3
MS.gene96923.t1	MTR_7g056277	28.571	266	162	6	13	264	254	505	9.83e-19	86.7
MS.gene96923.t1	MTR_5g058100	34.536	194	112	5	18	201	9	197	2.07e-18	84.7
MS.gene96923.t1	MTR_7g056287	29.008	262	158	6	17	264	2	249	2.08e-18	84.7
MS.gene96923.t1	MTR_5g073370	31.855	248	155	7	15	253	2	244	2.58e-18	84.3
MS.gene96923.t1	MTR_3g114200	40.132	152	87	3	1	148	1	152	3.98e-18	80.1
MS.gene96923.t1	MTR_5g008950	29.839	248	153	7	20	260	1	234	1.06e-17	82.8
MS.gene96923.t1	MTR_1g107385	29.032	279	166	8	17	268	31	304	1.50e-17	82.4
MS.gene96923.t1	MTR_1g108820	31.621	253	148	9	11	248	1	243	3.23e-17	80.9
MS.gene96923.t1	MTR_7g026500	33.816	207	122	5	9	201	5	210	3.27e-17	81.3
MS.gene96923.t1	MTR_7g033915	30.612	245	128	7	18	248	11	227	3.30e-17	81.3
MS.gene96923.t1	MTR_3g095600	31.950	241	120	9	18	245	4	213	4.17e-17	80.1
MS.gene96923.t1	MTR_1g066830	32.258	248	149	9	18	253	8	248	6.15e-17	80.5
MS.gene96923.t1	MTR_1g108820	32.143	252	148	9	11	248	1	243	9.28e-17	80.1
MS.gene96923.t1	MTR_3g107120	32.549	255	140	10	18	248	9	255	1.57e-16	79.3
MS.gene96923.t1	MTR_5g073420	30.303	264	160	7	9	261	2	252	2.83e-16	78.6
MS.gene96923.t1	MTR_3g071850	33.766	231	129	9	18	236	24	242	3.41e-16	79.3
MS.gene96923.t1	MTR_6g045333	34.034	238	119	10	18	236	61	279	4.97e-16	78.2
MS.gene96923.t1	MTR_1g085120	30.126	239	155	4	17	246	178	413	9.68e-16	77.4
MS.gene96923.t1	MTR_1g085120	30.126	239	155	4	17	246	91	326	9.74e-16	77.4
MS.gene96923.t1	MTR_5g012840	32.948	173	111	4	36	203	6	178	1.02e-15	76.3
MS.gene96923.t1	MTR_1g085120	30.126	239	155	4	17	246	166	401	1.30e-15	77.0
MS.gene96923.t1	MTR_6g011460	30.508	236	153	5	18	247	46	276	1.67e-15	76.6
MS.gene96923.t1	MTR_3g107160	28.519	270	177	7	14	271	6	271	1.75e-15	76.3
MS.gene96923.t1	MTR_3g113782	54.688	64	28	1	1	64	1	63	2.59e-15	70.5
MS.gene96923.t1	MTR_5g045510	34.426	183	110	6	20	195	14	193	7.43e-15	74.3
MS.gene96923.t1	MTR_7g033940	50.000	78	39	0	20	97	96	173	9.16e-15	72.4
MS.gene96923.t1	MTR_1089s0010	31.818	264	158	9	11	263	1	253	9.49e-15	73.9
MS.gene96923.t1	MTR_7g075820	25.987	304	173	8	16	281	4	293	1.59e-14	73.6
MS.gene96923.t1	MTR_6g040270	34.715	193	119	5	20	206	10	201	1.84e-14	73.2
MS.gene96923.t1	MTR_5g058000	30.000	260	162	6	11	261	1	249	2.92e-14	72.8
MS.gene96923.t1	MTR_2g020170	39.316	117	64	4	18	130	22	135	5.09e-14	68.2
MS.gene96923.t1	MTR_6g022500	27.076	277	182	6	18	283	101	368	4.27e-13	69.7
MS.gene96923.t1	MTR_4g024780	30.208	192	111	8	3	179	131	314	9.90e-13	68.6
MS.gene96923.t1	MTR_7g098590	41.053	95	56	0	11	105	11	105	1.76e-12	63.9
MS.gene96923.t1	MTR_3g108140	60.938	64	17	2	1	64	1	56	1.86e-12	64.7
MS.gene96923.t1	MTR_2g007500	29.032	217	135	5	18	228	14	217	3.11e-12	66.6
MS.gene96923.t1	MTR_5g061680	33.511	188	112	6	18	195	11	195	3.99e-12	66.2
MS.gene96923.t1	MTR_7g017280	29.319	191	110	6	1	174	131	313	4.69e-12	66.6
MS.gene96923.t1	MTR_5g087940	31.765	170	111	3	11	179	19	184	4.99e-12	66.2
MS.gene96923.t1	MTR_4g080590	27.624	181	127	2	18	194	23	203	5.06e-12	65.9
MS.gene96923.t1	MTR_7g055943	28.409	264	164	10	18	266	40	293	6.13e-12	65.9
MS.gene96923.t1	MTR_4g080590	27.778	180	126	2	18	193	23	202	7.01e-12	65.9
MS.gene96923.t1	MTR_6g022360	27.687	307	168	9	18	288	43	331	7.74e-12	65.5
MS.gene96923.t1	MTR_3g099830	28.626	262	154	7	18	268	12	251	9.47e-12	65.1
MS.gene96923.t1	MTR_7g007340	30.594	219	118	6	15	228	10	199	1.02e-11	65.1
MS.gene96923.t1	MTR_7g081290	46.512	86	41	3	15	96	15	99	1.08e-11	63.9
MS.gene96923.t1	MTR_7g023310	26.776	183	130	3	15	193	23	205	1.97e-11	64.3
MS.gene96923.t1	MTR_4g093690	31.282	195	112	6	14	193	14	201	2.85e-11	63.2
MS.gene96923.t1	MTR_1g095750	43.210	81	44	1	18	96	46	126	2.99e-11	60.8
MS.gene96923.t1	MTR_4g080787	31.863	204	117	7	11	193	12	214	3.58e-11	63.9
MS.gene96923.t1	MTR_2g005990	27.957	279	162	10	18	268	6	273	4.75e-11	63.2
MS.gene96923.t1	MTR_2g008310	28.333	240	160	5	18	248	2	238	4.75e-11	63.2
MS.gene96923.t1	MTR_8g014160	29.680	219	122	8	14	207	37	248	5.30e-11	63.2
MS.gene96923.t1	MTR_2g101950	27.647	170	114	4	12	174	74	241	6.64e-11	62.8
MS.gene96923.t1	MTR_2g101950	27.647	170	114	4	12	174	32	199	9.50e-11	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene96923.t1	AT3G50710	40.415	193	89	10	18	193	2	185	1.64e-18	85.5
MS.gene96923.t1	AT3G59200	32.381	210	121	7	18	213	7	209	6.37e-18	83.2
MS.gene96923.t1	AT3G59200	32.381	210	121	7	18	213	7	209	3.26e-17	82.0
MS.gene96923.t1	AT4G14103	40.107	187	99	7	18	193	8	192	6.57e-17	80.5
MS.gene96923.t1	AT4G14103	40.107	187	99	7	18	193	8	192	6.57e-17	80.5
MS.gene96923.t1	AT4G14103	40.107	187	99	7	18	193	8	192	9.68e-17	80.5
MS.gene96923.t1	AT5G41840	33.180	217	116	7	18	209	14	226	1.98e-16	79.7
MS.gene96923.t1	AT4G26340	38.710	186	98	7	18	193	2	181	5.01e-16	78.2
MS.gene96923.t1	AT5G53635	34.239	184	109	5	19	194	1	180	6.44e-16	77.8
MS.gene96923.t1	AT5G18770	31.500	200	127	5	4	194	10	208	7.87e-16	77.4
MS.gene96923.t1	AT3G59240	32.995	197	111	7	18	198	8	199	1.16e-15	77.4
MS.gene96923.t1	AT5G41830	31.034	203	118	5	18	199	13	214	1.27e-15	77.4
MS.gene96923.t1	AT5G18770	31.500	200	127	5	4	194	10	208	1.45e-15	77.0
MS.gene96923.t1	AT1G51370	33.889	180	112	4	16	193	17	191	4.33e-15	75.5
MS.gene96923.t1	AT4G00315	35.484	186	109	6	18	193	2	186	4.48e-15	75.5
MS.gene96923.t1	AT1G51370	33.889	180	112	4	16	193	17	191	4.48e-15	75.5
MS.gene96923.t1	AT1G51370	33.889	180	112	4	16	193	17	191	4.63e-15	74.7
MS.gene96923.t1	AT1G16930	30.198	202	126	4	9	203	6	199	5.45e-15	75.1
MS.gene96923.t1	AT1G16930	30.198	202	126	4	9	203	6	199	5.45e-15	75.1
MS.gene96923.t1	AT1G16930	30.198	202	126	4	9	203	6	199	5.45e-15	75.1
MS.gene96923.t1	AT1G55660	35.484	186	109	6	18	193	53	237	7.14e-15	74.3
MS.gene96923.t1	AT1G55660	37.234	188	103	7	18	193	53	237	1.47e-14	73.9
MS.gene96923.t1	AT4G10400	34.054	185	109	6	18	193	2	182	1.77e-14	73.6
MS.gene96923.t1	AT4G10400	34.054	185	109	6	18	193	2	182	1.77e-14	73.6
MS.gene96923.t1	AT4G10400	34.054	185	109	6	18	193	2	182	1.77e-14	73.6
MS.gene96923.t1	AT4G09920	33.514	185	110	6	18	193	2	182	2.52e-14	72.0
MS.gene96923.t1	AT4G09920	33.514	185	110	6	18	193	2	182	2.52e-14	72.0
MS.gene96923.t1	AT4G09920	33.514	185	110	6	18	193	2	182	2.52e-14	72.0
MS.gene96923.t1	AT5G18780	32.796	186	110	5	17	194	10	188	4.31e-14	72.4
MS.gene96923.t1	AT5G18780	32.796	186	110	5	17	194	10	188	4.31e-14	72.4
MS.gene96923.t1	AT4G09920	33.514	185	110	6	18	193	2	182	4.40e-14	71.6
MS.gene96923.t1	AT4G09920	33.514	185	110	6	18	193	2	182	4.40e-14	71.6
MS.gene96923.t1	AT4G26350	36.842	190	98	8	18	194	2	182	5.37e-14	72.0
MS.gene96923.t1	AT5G56370	39.344	183	96	9	18	191	2	178	5.69e-14	72.0
MS.gene96923.t1	AT5G56370	39.344	183	96	9	18	191	2	178	5.69e-14	72.0
MS.gene96923.t1	AT5G56370	39.344	183	96	9	18	191	2	178	5.90e-14	71.2
MS.gene96923.t1	AT5G22720	29.744	195	128	4	6	193	11	203	7.31e-14	72.0
MS.gene96923.t1	AT5G18780	32.796	186	110	5	17	194	10	188	8.51e-14	71.6
MS.gene96923.t1	AT5G18780	32.796	186	110	5	17	194	10	188	8.51e-14	71.6
MS.gene96923.t1	AT4G00160	32.967	182	116	4	18	193	16	197	9.40e-14	71.6
MS.gene96923.t1	AT4G14096	35.870	184	109	4	18	193	8	190	1.07e-13	71.2
MS.gene96923.t1	AT4G14096	35.870	184	109	4	18	193	8	190	1.07e-13	71.2
MS.gene96923.t1	AT1G69630	34.000	200	123	5	1	193	1	198	1.16e-13	71.2
MS.gene96923.t1	AT4G00320	31.220	205	119	6	18	201	13	216	1.51e-13	70.9
MS.gene96923.t1	AT4G13960	33.508	191	106	8	18	193	2	186	1.77e-13	70.9
MS.gene96923.t1	AT4G13960	33.508	191	106	8	18	193	2	186	1.77e-13	70.9
MS.gene96923.t1	AT4G15060	33.498	203	123	5	1	193	9	209	4.46e-13	69.3
MS.gene96923.t1	AT5G53640	28.342	187	125	3	11	193	15	196	6.69e-13	67.0
MS.gene96923.t1	AT5G44490	27.660	188	127	3	14	193	13	199	9.45e-13	68.6
MS.gene96923.t1	AT5G44490	27.660	188	127	3	14	193	13	199	1.03e-12	68.6
MS.gene96923.t1	AT5G25850	32.768	177	114	3	20	194	22	195	1.04e-12	68.6
MS.gene96923.t1	AT1G13780	33.508	191	112	5	18	193	10	200	1.36e-12	68.2
MS.gene96923.t1	AT1G13780	33.508	191	112	5	18	193	10	200	1.44e-12	67.4
MS.gene96923.t1	AT3G52680	34.239	184	110	6	18	193	21	201	2.06e-12	67.0
MS.gene96923.t1	AT1G66320	29.121	182	127	2	14	193	26	207	2.26e-12	67.4
MS.gene96923.t1	AT3G52680	34.239	184	110	6	18	193	21	201	2.84e-12	67.0
MS.gene96923.t1	AT1G80470	31.250	192	109	6	16	193	13	195	3.90e-12	66.6
MS.gene96923.t1	AT5G56820	34.906	212	121	8	1	207	1	200	4.80e-12	66.2
MS.gene96923.t1	AT4G22280	31.667	180	118	4	18	193	2	180	4.92e-12	66.2
MS.gene96923.t1	AT4G22280	31.667	180	118	4	18	193	2	180	5.17e-12	65.9
MS.gene96923.t1	AT4G13965	33.889	180	112	4	18	193	10	186	5.39e-12	66.2
MS.gene96923.t1	AT5G53840	31.937	191	119	4	7	193	10	193	6.32e-12	65.9
MS.gene96923.t1	AT5G22670	32.597	181	113	4	18	193	11	187	8.55e-12	65.5
MS.gene96923.t1	AT5G56420	33.696	184	110	6	18	193	6	185	9.43e-12	65.5
MS.gene96923.t1	AT5G56420	33.696	184	110	6	18	193	6	185	9.43e-12	65.5
MS.gene96923.t1	AT5G56420	33.696	184	110	6	18	193	6	185	9.43e-12	65.5
MS.gene96923.t1	AT5G22660	31.000	200	133	3	17	213	12	209	1.03e-11	64.7
MS.gene96923.t1	AT5G22660	32.778	180	116	3	17	193	12	189	1.04e-11	65.5
MS.gene96923.t1	AT3G59190	29.362	235	139	8	1	218	1	225	1.05e-11	65.1
MS.gene96923.t1	AT3G59230	30.901	233	122	10	18	222	12	233	1.27e-11	65.1
MS.gene96923.t1	AT5G41630	30.769	195	115	6	18	193	12	205	1.28e-11	65.1
MS.gene96923.t1	AT5G56380	33.333	204	115	6	18	207	2	198	1.63e-11	64.7
MS.gene96923.t1	AT5G56380	33.333	204	115	6	18	207	2	198	1.63e-11	64.7
MS.gene96923.t1	AT4G15060	34.946	186	109	5	18	193	172	355	2.02e-11	64.7
MS.gene96923.t1	AT3G59190	29.362	235	139	8	1	218	1	225	2.23e-11	64.3
MS.gene96923.t1	AT3G49150	29.592	196	122	5	11	193	9	201	2.51e-11	64.3
MS.gene96923.t1	AT5G27750	32.804	189	114	4	18	193	5	193	2.85e-11	63.9
MS.gene96923.t1	AT3G58880	30.729	192	113	5	18	193	3	190	3.10e-11	63.9
MS.gene96923.t1	AT5G27750	32.804	189	114	4	18	193	5	193	3.67e-11	63.5
MS.gene96923.t1	AT5G22610	31.183	186	119	3	17	193	17	202	4.30e-11	63.5
MS.gene96923.t1	AT3G58860	32.323	198	111	9	13	193	2	193	4.57e-11	63.5
MS.gene96923.t1	AT5G22610	31.183	186	119	3	17	193	17	202	4.72e-11	63.5
MS.gene96923.t1	AT5G56690	29.348	184	120	3	20	193	4	187	5.65e-11	63.2
MS.gene96923.t1	AT2G42720	31.606	193	111	7	18	193	2	190	9.85e-11	62.4

Find 72 sgRNAs with CRISPR-Local

Find 72 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAGAGAATTTACGGCATTTA+AGG	0.174176	1.4:-31634294	None:intergenic
TTCAAACAGGTGGGAGCGTT+TGG	0.303306	1.4:-31634214	None:intergenic
TTGCACCGTCAATAAAAGTT+TGG	0.331242	1.4:-31634327	None:intergenic
TTGATAGTTAGAACGATAGA+AGG	0.361470	1.4:-31634412	None:intergenic
TTTCACGCCTAGAGAATTTA+CGG	0.363412	1.4:-31634303	None:intergenic
ATAAGTATTCTTTGTTTGAT+TGG	0.363975	1.4:+31634701	MS.gene96923:CDS
GATGACAATAATTTGAAAAC+TGG	0.376416	1.4:-31634784	None:intergenic
TTGTTTCCAGCTCCTCTAGA+AGG	0.378519	1.4:-31634576	None:intergenic
CATGTGAAGTGCTTTGAGTA+AGG	0.409063	1.4:-31634497	None:intergenic
CATCTCTGGAAACTTCTGTC+TGG	0.415210	1.4:+31634547	MS.gene96923:CDS
TTAAAAGTCATGAACATCTC+TGG	0.419732	1.4:+31634533	MS.gene96923:CDS
GTTGTAGGGGCACCACTTGT+AGG	0.429661	1.4:-31634747	None:intergenic
TTTAAGGTTTAATGAGAGGA+TGG	0.435701	1.4:-31634278	None:intergenic
GGAAAGAATGTGATGAAGAA+GGG	0.436664	1.4:-31634089	None:intergenic
GTTATCTCGGTTGGTGATGC+AGG	0.440544	1.4:-31634248	None:intergenic
GCAGAAGACATACCAGTTGT+AGG	0.453423	1.4:-31634762	None:intergenic
ATGTTACGCAGTTCAATTTG+AGG	0.457591	1.4:-31634447	None:intergenic
ATCTCTGGAAACTTCTGTCT+GGG	0.458575	1.4:+31634548	MS.gene96923:CDS
AATGTTAGCTTTCACCAACT+TGG	0.461078	1.4:-31634674	None:intergenic
GTGAGTTGTGAGAGGAAGAG+TGG	0.462806	1.4:-31634166	None:intergenic
TTGAATGCCCTAGCCTCTGC+GGG	0.466072	1.4:-31634018	None:intergenic
GGAGTTGAAGAATTTCAAAC+AGG	0.467925	1.4:-31634227	None:intergenic
ACAAGTGGTGCCCCTACAAC+TGG	0.473669	1.4:+31634750	MS.gene96923:CDS
TCAATGTCCCCGCAGAGGCT+AGG	0.479314	1.4:+31634010	None:intergenic
CATTCCTAAAATAAAACGGC+GGG	0.479478	1.4:-31634874	None:intergenic
AGGAAAGAATGTGATGAAGA+AGG	0.484956	1.4:-31634090	None:intergenic
CAATGTCCCCGCAGAGGCTA+GGG	0.494778	1.4:+31634011	None:intergenic
CAGAAGACATACCAGTTGTA+GGG	0.495964	1.4:-31634761	None:intergenic
CTAACATTCCTAAAATAAAA+CGG	0.502059	1.4:-31634878	None:intergenic
GTCTTTGTCATCGAAGTTGA+GGG	0.504540	1.4:-31634188	None:intergenic
GGTTCCCCTTCTAGAGGAGC+TGG	0.505196	1.4:+31634570	MS.gene96923:CDS
GGTGTCTTTCGTCGGAAGGA+AGG	0.508560	1.4:-31634110	None:intergenic
GTGACGGTGGTGTCTTTCGT+CGG	0.519533	1.4:-31634118	None:intergenic
TTAAATGCCGTAAATTCTCT+AGG	0.521251	1.4:+31634296	MS.gene96923:CDS
GTTGAAGAATTTCAAACAGG+TGG	0.523380	1.4:-31634224	None:intergenic
TGTTTCCAGCTCCTCTAGAA+GGG	0.524428	1.4:-31634575	None:intergenic
CAAATTGAACTGCGTAACAT+TGG	0.528944	1.4:+31634450	MS.gene96923:CDS
ATGTGAAGTGCTTTGAGTAA+GGG	0.530631	1.4:-31634496	None:intergenic
GGCATTTAAGGTTTAATGAG+AGG	0.534129	1.4:-31634282	None:intergenic
CAAGCCTTCTCTCAGAGAGA+TGG	0.538838	1.4:+31634140	MS.gene96923:CDS
AGTCTTTGTCATCGAAGTTG+AGG	0.539917	1.4:-31634189	None:intergenic
CAACACCGACAGTCTCGATA+AGG	0.540842	1.4:-31634619	None:intergenic
GTCTGGGGTTCCCCTTCTAG+AGG	0.540939	1.4:+31634564	MS.gene96923:CDS
AGTTGAGGGTGAGTTGTGAG+AGG	0.542484	1.4:-31634174	None:intergenic
AACATTGGACGATGTTCCAC+AGG	0.548895	1.4:+31634465	MS.gene96923:CDS
GTTTGATTGGTTTCATAACG+TGG	0.551742	1.4:+31634714	MS.gene96923:CDS
CGGTGGTGTCTTTCGTCGGA+AGG	0.559236	1.4:-31634114	None:intergenic
CTCTGAGAGAAGGCTTGTGA+CGG	0.560531	1.4:-31634134	None:intergenic
GGATGGGTACAGCGTTATCT+CGG	0.561521	1.4:-31634261	None:intergenic
GTTTCCATCTCTCTGAGAGA+AGG	0.564198	1.4:-31634144	None:intergenic
TTAAGGTTTAATGAGAGGAT+GGG	0.564482	1.4:-31634277	None:intergenic
CTTACTCAAAGCACTTCACA+TGG	0.569756	1.4:+31634498	MS.gene96923:CDS
GGAGCATCTGCGCCTACAAG+TGG	0.584663	1.4:+31634735	MS.gene96923:CDS
GGGTACAGCGTTATCTCGGT+TGG	0.587694	1.4:-31634257	None:intergenic
GAAAGAATGTGATGAAGAAG+GGG	0.590034	1.4:-31634088	None:intergenic
GTTTCCAGCTCCTCTAGAAG+GGG	0.592605	1.4:-31634574	None:intergenic
TTGAAGAATTTCAAACAGGT+GGG	0.592854	1.4:-31634223	None:intergenic
GTTCAATTTGAGGACAGACA+AGG	0.611188	1.4:-31634437	None:intergenic
TGAGAGAAGGCTTGTGACGG+TGG	0.611448	1.4:-31634131	None:intergenic
GATAGAAGGCAACACTGAGT+AGG	0.627964	1.4:-31634398	None:intergenic
GTTGAATGCCCTAGCCTCTG+CGG	0.644720	1.4:-31634019	None:intergenic
ATTCGTCGAGATCGATGCTG+AGG	0.646132	1.4:-31634375	None:intergenic
TTCGTCGAGATCGATGCTGA+GGG	0.650567	1.4:-31634374	None:intergenic
CGACATAATCAGTGCACTGT+CGG	0.650821	1.4:+31634063	MS.gene96923:CDS
AGAAGACATACCAGTTGTAG+GGG	0.656588	1.4:-31634760	None:intergenic
TCTCTGGAAACTTCTGTCTG+GGG	0.667742	1.4:+31634549	MS.gene96923:CDS
AAACACCTTATCGAGACTGT+CGG	0.675204	1.4:+31634614	MS.gene96923:CDS
ACATCTCAATGTCCCCGCAG+AGG	0.678052	1.4:+31634005	None:intergenic
ACATTCCTAAAATAAAACGG+CGG	0.679244	1.4:-31634875	None:intergenic
ATTCCTAAAATAAAACGGCG+GGG	0.682642	1.4:-31634873	None:intergenic
AGTAAGGGAAGATGAACCTG+TGG	0.698887	1.4:-31634481	None:intergenic
TGAATGCCCTAGCCTCTGCG+GGG	0.750021	1.4:-31634017	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAAGTATTCTTTGTTTGAT+TGG	+	chr1.4:31634701-31634720	MS.gene96923:CDS	20.0%
!	GATGACAATAATTTGAAAAC+TGG	-	chr1.4:31634787-31634806	None:intergenic	25.0%
!!	GAAATCCAAACTTTTATTGA+CGG	+	chr1.4:31634322-31634341	MS.gene96923:CDS	25.0%
!!!	TGCAGTGATTTTTTTCTTAA+TGG	-	chr1.4:31634833-31634852	None:intergenic	25.0%
	AAAAAAATCACTGCACATGT+GGG	+	chr1.4:31634838-31634857	MS.gene96923:CDS	30.0%
	TAGAGAATTTACGGCATTTA+AGG	-	chr1.4:31634297-31634316	None:intergenic	30.0%
	TTAAAAGTCATGAACATCTC+TGG	+	chr1.4:31634533-31634552	MS.gene96923:CDS	30.0%
	TTAAATGCCGTAAATTCTCT+AGG	+	chr1.4:31634296-31634315	MS.gene96923:CDS	30.0%
	TTAAGGTTTAATGAGAGGAT+GGG	-	chr1.4:31634280-31634299	None:intergenic	30.0%
	TTGAAGAATTTCAAACAGGT+GGG	-	chr1.4:31634226-31634245	None:intergenic	30.0%
!	TTGATAGTTAGAACGATAGA+AGG	-	chr1.4:31634415-31634434	None:intergenic	30.0%
!	TTTAAGGTTTAATGAGAGGA+TGG	-	chr1.4:31634281-31634300	None:intergenic	30.0%
	AGGAAAGAATGTGATGAAGA+AGG	-	chr1.4:31634093-31634112	None:intergenic	35.0%
	ATGTTACGCAGTTCAATTTG+AGG	-	chr1.4:31634450-31634469	None:intergenic	35.0%
	CAAATTGAACTGCGTAACAT+TGG	+	chr1.4:31634450-31634469	MS.gene96923:CDS	35.0%
	GAAAAAAATCACTGCACATG+TGG	+	chr1.4:31634837-31634856	MS.gene96923:CDS	35.0%
	GAAAGAATGTGATGAAGAAG+GGG	-	chr1.4:31634091-31634110	None:intergenic	35.0%
	GGAAAGAATGTGATGAAGAA+GGG	-	chr1.4:31634092-31634111	None:intergenic	35.0%
	GGAGTTGAAGAATTTCAAAC+AGG	-	chr1.4:31634230-31634249	None:intergenic	35.0%
	GTTGAAGAATTTCAAACAGG+TGG	-	chr1.4:31634227-31634246	None:intergenic	35.0%
	TTGCACCGTCAATAAAAGTT+TGG	-	chr1.4:31634330-31634349	None:intergenic	35.0%
	TTTCACGCCTAGAGAATTTA+CGG	-	chr1.4:31634306-31634325	None:intergenic	35.0%
!	ATGTGAAGTGCTTTGAGTAA+GGG	-	chr1.4:31634499-31634518	None:intergenic	35.0%
!	GGCATTTAAGGTTTAATGAG+AGG	-	chr1.4:31634285-31634304	None:intergenic	35.0%
!!	AATGTTAGCTTTCACCAACT+TGG	-	chr1.4:31634677-31634696	None:intergenic	35.0%
!!	GTTTGATTGGTTTCATAACG+TGG	+	chr1.4:31634714-31634733	MS.gene96923:CDS	35.0%
!!!	TGAGGGTTTTAAGGTTTGTA+AGG	-	chr1.4:31634360-31634379	None:intergenic	35.0%
	AAACACCTTATCGAGACTGT+CGG	+	chr1.4:31634614-31634633	MS.gene96923:CDS	40.0%
	AGAAGACATACCAGTTGTAG+GGG	-	chr1.4:31634763-31634782	None:intergenic	40.0%
	AGTCTTTGTCATCGAAGTTG+AGG	-	chr1.4:31634192-31634211	None:intergenic	40.0%
	CAGAAGACATACCAGTTGTA+GGG	-	chr1.4:31634764-31634783	None:intergenic	40.0%
	GTCTTTGTCATCGAAGTTGA+GGG	-	chr1.4:31634191-31634210	None:intergenic	40.0%
	GTTCAATTTGAGGACAGACA+AGG	-	chr1.4:31634440-31634459	None:intergenic	40.0%
!	ATCTCTGGAAACTTCTGTCT+GGG	+	chr1.4:31634548-31634567	MS.gene96923:CDS	40.0%
!	CATGTGAAGTGCTTTGAGTA+AGG	-	chr1.4:31634500-31634519	None:intergenic	40.0%
!	CTTACTCAAAGCACTTCACA+TGG	+	chr1.4:31634498-31634517	MS.gene96923:CDS	40.0%
!	TGTTGCATGCTTTTCCAAGT+TGG	+	chr1.4:31634660-31634679	MS.gene96923:CDS	40.0%
	AACATTGGACGATGTTCCAC+AGG	+	chr1.4:31634465-31634484	MS.gene96923:CDS	45.0%
	AGTAAGGGAAGATGAACCTG+TGG	-	chr1.4:31634484-31634503	None:intergenic	45.0%
	CGACATAATCAGTGCACTGT+CGG	+	chr1.4:31634063-31634082	MS.gene96923:CDS	45.0%
	GATAGAAGGCAACACTGAGT+AGG	-	chr1.4:31634401-31634420	None:intergenic	45.0%
	GCAGAAGACATACCAGTTGT+AGG	-	chr1.4:31634765-31634784	None:intergenic	45.0%
	TTGTTTCCAGCTCCTCTAGA+AGG	-	chr1.4:31634579-31634598	None:intergenic	45.0%
!	CATCTCTGGAAACTTCTGTC+TGG	+	chr1.4:31634547-31634566	MS.gene96923:CDS	45.0%
!	GATCGATGCTGAGGGTTTTA+AGG	-	chr1.4:31634369-31634388	None:intergenic	45.0%
!	GTTTCCATCTCTCTGAGAGA+AGG	-	chr1.4:31634147-31634166	None:intergenic	45.0%
!	TCTCTGGAAACTTCTGTCTG+GGG	+	chr1.4:31634549-31634568	MS.gene96923:CDS	45.0%
!	TGTTTCCAGCTCCTCTAGAA+GGG	-	chr1.4:31634578-31634597	None:intergenic	45.0%
	AGTTGAGGGTGAGTTGTGAG+AGG	-	chr1.4:31634177-31634196	None:intergenic	50.0%
	ATTCGTCGAGATCGATGCTG+AGG	-	chr1.4:31634378-31634397	None:intergenic	50.0%
	CAACACCGACAGTCTCGATA+AGG	-	chr1.4:31634622-31634641	None:intergenic	50.0%
	CAAGCCTTCTCTCAGAGAGA+TGG	+	chr1.4:31634140-31634159	MS.gene96923:CDS	50.0%
	GGATGGGTACAGCGTTATCT+CGG	-	chr1.4:31634264-31634283	None:intergenic	50.0%
	GTGAGTTGTGAGAGGAAGAG+TGG	-	chr1.4:31634169-31634188	None:intergenic	50.0%
	TTCGTCGAGATCGATGCTGA+GGG	-	chr1.4:31634377-31634396	None:intergenic	50.0%
!	CTCTGAGAGAAGGCTTGTGA+CGG	-	chr1.4:31634137-31634156	None:intergenic	50.0%
!	GTTTCCAGCTCCTCTAGAAG+GGG	-	chr1.4:31634577-31634596	None:intergenic	50.0%
!!	GTTATCTCGGTTGGTGATGC+AGG	-	chr1.4:31634251-31634270	None:intergenic	50.0%
!!	TTCAAACAGGTGGGAGCGTT+TGG	-	chr1.4:31634217-31634236	None:intergenic	50.0%
	ACAAGTGGTGCCCCTACAAC+TGG	+	chr1.4:31634750-31634769	MS.gene96923:CDS	55.0%
	GGGTACAGCGTTATCTCGGT+TGG	-	chr1.4:31634260-31634279	None:intergenic	55.0%
	GGTGTCTTTCGTCGGAAGGA+AGG	-	chr1.4:31634113-31634132	None:intergenic	55.0%
	GTGACGGTGGTGTCTTTCGT+CGG	-	chr1.4:31634121-31634140	None:intergenic	55.0%
	GTTGAATGCCCTAGCCTCTG+CGG	-	chr1.4:31634022-31634041	None:intergenic	55.0%
	TGAGAGAAGGCTTGTGACGG+TGG	-	chr1.4:31634134-31634153	None:intergenic	55.0%
	TTGAATGCCCTAGCCTCTGC+GGG	-	chr1.4:31634021-31634040	None:intergenic	55.0%
!!	GTTGTAGGGGCACCACTTGT+AGG	-	chr1.4:31634750-31634769	None:intergenic	55.0%
	CGGTGGTGTCTTTCGTCGGA+AGG	-	chr1.4:31634117-31634136	None:intergenic	60.0%
	TGAATGCCCTAGCCTCTGCG+GGG	-	chr1.4:31634020-31634039	None:intergenic	60.0%
!	GGAGCATCTGCGCCTACAAG+TGG	+	chr1.4:31634735-31634754	MS.gene96923:CDS	60.0%
!	GGTTCCCCTTCTAGAGGAGC+TGG	+	chr1.4:31634570-31634589	MS.gene96923:CDS	60.0%
!	GTCTGGGGTTCCCCTTCTAG+AGG	+	chr1.4:31634564-31634583	MS.gene96923:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.4	gene	31634013	31634891	31634013	ID=MS.gene96923
chr1.4	mRNA	31634013	31634891	31634013	ID=MS.gene96923.t1;Parent=MS.gene96923
chr1.4	exon	31634013	31634891	31634013	ID=MS.gene96923.t1.exon1;Parent=MS.gene96923.t1
chr1.4	CDS	31634013	31634891	31634013	ID=cds.MS.gene96923.t1;Parent=MS.gene96923.t1

Gene Sequence

>MS.gene96923

ATGTCCCCGCAGAGGCTAGGGCATTCAACTCTAGAAGAAGAAGAAGAAGACGACATAATCAGTGCACTGTCGGATCCCCTTCTTCATCACATTCTTTCCTTCCTTCCGACGAAAGACACCACCGTCACAAGCCTTCTCTCAGAGAGATGGAAACCACTCTTCCTCTCACAACTCACCCTCAACTTCGATGACAAAGACTTTCCAAACGCTCCCACCTGTTTGAAATTCTTCAACTCCTGCATCACCAACCGAGATAACGCTGTACCCATCCTCTCATTAAACCTTAAATGCCGTAAATTCTCTAGGCGTGAAATCCAAACTTTTATTGACGGTGCAATAGTAAACCTTACAAACCTTAAAACCCTCAGCATCGATCTCGACGAATCCTACTCAGTGTTGCCTTCTATCGTTCTAACTATCAAAACCTTGTCTGTCCTCAAATTGAACTGCGTAACATTGGACGATGTTCCACAGGTTCATCTTCCCTTACTCAAAGCACTTCACATGGAATATGTCACTTTTAAAAGTCATGAACATCTCTGGAAACTTCTGTCTGGGGTTCCCCTTCTAGAGGAGCTGGAAACAAAGCATTTAATCGTAAAAACACCTTATCGAGACTGTCGGTGTTGTTCACATTCACAAAGACGTGTTGCATGCTTTTCCAAGTTGGTGAAAGCTAACATTCGTGATAAGTATTCTTTGTTTGATTGGTTTCATAACGTGGAGCATCTGCGCCTACAAGTGGTGCCCCTACAACTGGTATGTCTTCTGCCAGTTTTCAAATTATTGTCATCACTTGTTGTTTTAGTTATTGTCACCATTAAGAAAAAAATCACTGCACATGTGGGAGAATTCTTGATCCCCGCCGTTTTATTTTAG

Protein sequence

>MS.gene96923.t1

MSPQRLGHSTLEEEEEDDIISALSDPLLHHILSFLPTKDTTVTSLLSERWKPLFLSQLTLNFDDKDFPNAPTCLKFFNSCITNRDNAVPILSLNLKCRKFSRREIQTFIDGAIVNLTNLKTLSIDLDESYSVLPSIVLTIKTLSVLKLNCVTLDDVPQVHLPLLKALHMEYVTFKSHEHLWKLLSGVPLLEELETKHLIVKTPYRDCRCCSHSQRRVACFSKLVKANIRDKYSLFDWFHNVEHLRLQVVPLQLVCLLPVFKLLSSLVVLVIVTIKKKITAHVGEFLIPAVLF