AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001775.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001775.01.T01 MTR_1g042800 89.202 213 22 1 45 256 864 1076 4.20e-114 357
MsG0180001775.01.T01 MTR_1g042820 92.157 102 6 1 282 383 87 186 9.37e-53 174
MsG0180001775.01.T01 MTR_7g072410 44.811 212 106 6 49 254 874 1080 5.36e-40 152
MsG0180001775.01.T01 MTR_4g029410 44.172 163 87 3 90 250 882 1042 4.09e-26 110
MsG0180001775.01.T01 MTR_1g076110 50.980 102 39 3 283 383 51 142 5.35e-24 96.7
MsG0180001775.01.T01 MTR_6g080550 79.592 49 10 0 1 49 1 49 1.00e-17 78.2
MsG0180001775.01.T01 MTR_6g034795 32.243 214 99 7 49 226 890 1093 1.71e-16 82.0
MsG0180001775.01.T01 MTR_4g052640 71.429 49 14 0 1 49 1 49 9.74e-16 72.0
MsG0180001775.01.T01 MTR_5g089900 51.429 70 33 1 171 239 1043 1112 1.46e-13 72.8
MsG0180001775.01.T01 MTR_3g053630 59.322 59 24 0 1 59 1 59 2.27e-13 66.6
MsG0180001775.01.T01 MTR_1g042230 63.265 49 18 0 1 49 1 49 7.13e-13 63.5
MsG0180001775.01.T01 MTR_6g013780 54.237 59 27 0 1 59 1 59 1.75e-11 59.7
MsG0180001775.01.T01 MTR_3g064560 51.923 52 24 1 175 225 976 1027 5.90e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001775.01.T01 AT4G14368 32.402 179 89 4 49 226 872 1019 5.08e-21 95.9
MsG0180001775.01.T01 AT4G14368 32.402 179 89 4 49 226 870 1017 5.72e-21 95.5
MsG0180001775.01.T01 AT4G14368 32.402 179 89 4 49 226 865 1012 5.87e-21 95.5
MsG0180001775.01.T01 AT4G14380 59.259 54 22 0 330 383 147 200 8.33e-16 75.9
MsG0180001775.01.T01 AT3G23270 32.447 188 75 4 45 225 860 1002 4.55e-15 77.4
MsG0180001775.01.T01 AT3G23270 32.447 188 75 4 45 225 869 1011 4.86e-15 77.4
MsG0180001775.01.T01 AT5G19420 36.310 168 96 8 64 226 959 1120 6.78e-13 70.9
MsG0180001775.01.T01 AT5G19420 55.072 69 27 3 159 226 1021 1086 7.41e-13 70.9
MsG0180001775.01.T01 AT5G12350 56.604 53 22 1 175 226 1010 1062 4.65e-12 68.2
MsG0180001775.01.T01 AT1G65920 50.943 53 25 1 175 226 905 957 7.48e-11 64.3
MsG0180001775.01.T01 AT1G65920 50.943 53 25 1 175 226 951 1003 8.00e-11 64.3

Find 75 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGCTACTTGATGAAATTA+TGG 0.227786 1:+26749592 MsG0180001775.01.T01:intron
ATAAATTTCGTGAAGATATA+AGG 0.252185 1:+26751867 MsG0180001775.01.T01:CDS
CCAATACTTTCATTATTTAT+AGG 0.264215 1:-26748595 None:intergenic
ACTTTCAAGGTTTCACTTCC+AGG 0.272721 1:-26747736 None:intergenic
CATGGCAAGTAGTGGTTTCT+AGG 0.324426 1:+26751801 MsG0180001775.01.T01:CDS
TCTTCAAACGTGTTAGATTC+AGG 0.331841 1:+26748139 MsG0180001775.01.T01:CDS
GGTGGAGCAATAACAAAGAT+AGG 0.362229 1:+26748548 MsG0180001775.01.T01:CDS
GAAAAGTATAAAGTTTGTTA+TGG 0.362333 1:+26749614 MsG0180001775.01.T01:CDS
TCATCTCCTCCATTTGTTGA+TGG 0.366695 1:-26747934 None:intergenic
CTATCGGATGCTGGTATATC+AGG 0.367542 1:-26747850 None:intergenic
TATACTATCTCGTTTGATCT+AGG 0.372231 1:+26745129 MsG0180001775.01.T01:CDS
CCACTTGCTTCCACTTTGCT+TGG 0.374475 1:-26749647 None:intergenic
CTTTCATTATTTATAGGTGG+TGG 0.398347 1:-26748589 None:intergenic
TTGAGCATGAATCACTTTCA+AGG 0.401773 1:-26747749 None:intergenic
GTTTCACTTCCAGGAATCTC+TGG 0.420177 1:-26747727 None:intergenic
GCTGCCATCAGGTATTACTA+TGG 0.420251 1:-26748112 None:intergenic
TTCTCCTTCTCTCACAGGCC+TGG 0.421175 1:-26748046 None:intergenic
CAATGATGTAGATACTTTAG+AGG 0.423826 1:+26751775 MsG0180001775.01.T01:CDS
TTGAAGACTTTGCTGCCATC+AGG 0.430641 1:-26748123 None:intergenic
AGCGGTGTCTCCACCAAACT+TGG 0.440723 1:+26747996 MsG0180001775.01.T01:CDS
TCTCTATTCTCAAACTCATT+CGG 0.450268 1:+26751658 MsG0180001775.01.T01:CDS
ACAAAGATAGGGTGTATAGA+AGG 0.473321 1:+26748560 MsG0180001775.01.T01:CDS
GCACGGTGATCCTTACGTGC+AGG 0.478962 1:+26745103 MsG0180001775.01.T01:CDS
CCTATAAATAATGAAAGTAT+TGG 0.480812 1:+26748595 MsG0180001775.01.T01:CDS
GAGGTTGTTCCATCAACAAA+TGG 0.481872 1:+26747925 MsG0180001775.01.T01:CDS
TCGCTACACTTGGTTGATTG+AGG 0.481884 1:-26748662 None:intergenic
AATGTTGCAAGTGGATCAAA+AGG 0.493765 1:+26751829 MsG0180001775.01.T01:CDS
ATACAAGTGATGAGGTTGTT+GGG 0.501598 1:+26745039 None:intergenic
ATCTAGGTTTATCCCTCCGA+TGG 0.507320 1:+26745145 MsG0180001775.01.T01:CDS
TAGTATAGACCCTGCACGTA+AGG 0.515514 1:-26745113 None:intergenic
TATACAAGTGATGAGGTTGT+TGG 0.515845 1:+26745038 None:intergenic
AAGTTGCCACCAGAGATTCC+TGG 0.518138 1:+26747718 MsG0180001775.01.T01:CDS
TTTCATTATTTATAGGTGGT+GGG 0.518811 1:-26748588 None:intergenic
GGAAAATAATATCAGATCAC+AGG 0.532542 1:+26748017 MsG0180001775.01.T01:CDS
GACGTTTCTCCTTCTCTCAC+AGG 0.534071 1:-26748051 None:intergenic
GTGAGCAACAAGCAGAAGAA+TGG 0.534233 1:+26748527 MsG0180001775.01.T01:CDS
TCAGATCACAGGAGTCGTCC+AGG 0.538217 1:+26748028 MsG0180001775.01.T01:CDS
ACCGTGCGATCAACAGCTGC+AGG 0.539419 1:-26745087 None:intergenic
AAGTCTGCAAGAGCAAAGAT+TGG 0.541969 1:+26747882 MsG0180001775.01.T01:CDS
GCAAAGTGGAAGCAAGTGGC+TGG 0.542689 1:+26749651 MsG0180001775.01.T01:CDS
TGTTGCTCAGACTCGAAACT+CGG 0.544944 1:-26747820 None:intergenic
CACGGTGATCCTTACGTGCA+GGG 0.553073 1:+26745104 MsG0180001775.01.T01:CDS
GCTCAGACTCGAAACTCGGT+TGG 0.558327 1:-26747816 None:intergenic
TCATCTAGCACCCCACCTCA+TGG 0.559786 1:+26748619 MsG0180001775.01.T01:CDS
TCGTCCAGGCCTGTGAGAGA+AGG 0.560188 1:+26748042 MsG0180001775.01.T01:CDS
AGACTCGAAACTCGGTTGGA+AGG 0.560356 1:-26747812 None:intergenic
ACCTGCAGCTGTTGATCGCA+CGG 0.565050 1:+26745086 MsG0180001775.01.T01:CDS
GAAGAGTCACTATCGGATGC+TGG 0.565338 1:-26747859 None:intergenic
TAGGTCTCCAATGTTGCAAG+TGG 0.566515 1:+26751820 MsG0180001775.01.T01:CDS
GTGGAGCAATAACAAAGATA+GGG 0.566673 1:+26748549 MsG0180001775.01.T01:CDS
CTGCAAGAGCAAAGATTGGA+AGG 0.568888 1:+26747886 MsG0180001775.01.T01:CDS
TTGGGACGTTCTAACCTAGT+GGG 0.570389 1:+26745057 MsG0180001775.01.T01:CDS
TAGATACTTTAGAGGATGCA+TGG 0.571579 1:+26751783 MsG0180001775.01.T01:CDS
AACAAGTAGAGAAATTGAAA+AGG 0.571929 1:+26751733 MsG0180001775.01.T01:CDS
GTTGGGACGTTCTAACCTAG+TGG 0.572060 1:+26745056 MsG0180001775.01.T01:CDS
AGCAACAAGCAGAAGAATGG+TGG 0.574728 1:+26748530 MsG0180001775.01.T01:CDS
AGAGGATGCATGGCAAGTAG+TGG 0.577407 1:+26751793 MsG0180001775.01.T01:CDS
AGGAAACAATGAAGTTTCTG+AGG 0.580640 1:+26747906 MsG0180001775.01.T01:CDS
ATACTTTCATTATTTATAGG+TGG 0.581163 1:-26748592 None:intergenic
AACTGCACATGTTAATCGCA+CGG 0.589147 1:+26745170 MsG0180001775.01.T01:CDS
CAGACTTGAAGAGTCACTAT+CGG 0.595919 1:-26747866 None:intergenic
CTGCAGGTTGATAACCCACT+AGG 0.599437 1:-26745071 None:intergenic
TCACTTCCAGGAATCTCTGG+TGG 0.602532 1:-26747724 None:intergenic
CATTGCTTGAATTTCATGAG+AGG 0.602579 1:+26751906 MsG0180001775.01.T01:CDS
ATTAGTCATGCTCATGCACA+AGG 0.606874 1:+26751707 MsG0180001775.01.T01:CDS
TAACATGTGCAGTTAGCCAT+CGG 0.609968 1:-26745161 None:intergenic
CCAAGCAAAGTGGAAGCAAG+TGG 0.617363 1:+26749647 MsG0180001775.01.T01:CDS
CTATCACTTTCCAAGCAAAG+TGG 0.619398 1:+26749637 MsG0180001775.01.T01:CDS
CATGTGCAGTTAGCCATCGG+AGG 0.624868 1:-26745158 None:intergenic
ATGTGCAGTTAGCCATCGGA+GGG 0.641888 1:-26745157 None:intergenic
ACAGCCATAGTAATACCTGA+TGG 0.653583 1:+26748108 MsG0180001775.01.T01:CDS
GTTGTTCCATCAACAAATGG+AGG 0.653698 1:+26747928 MsG0180001775.01.T01:CDS
AAGTGGAAGCAAGTGGCTGG+TGG 0.669735 1:+26749654 MsG0180001775.01.T01:CDS
GTCATTGAACAATTTGAACA+CGG 0.677875 1:+26748075 MsG0180001775.01.T01:CDS
CTCGTATTTATCAACTACAG+CGG 0.698744 1:+26747978 MsG0180001775.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTTAAAAAACATTC+AGG - Chr1:26747167-26747186 None:intergenic 10.0%
!! AATAAAATAACTAATTACAA+TGG - Chr1:26747295-26747314 None:intergenic 10.0%
!!! ATAAAAACAATTTTTTTTCA+AGG - Chr1:26750893-26750912 None:intergenic 10.0%
!! AAATATTAATATAAAGGAGT+TGG - Chr1:26749909-26749928 None:intergenic 15.0%
!! ATGTAACTAGTTATAAATTA+GGG - Chr1:26745449-26745468 None:intergenic 15.0%
!! CATTAGAAAAATATAAGAAA+TGG + Chr1:26750411-26750430 MsG0180001775.01.T01:intron 15.0%
!! TTGGTTTCAATTAATATAAA+GGG + Chr1:26749974-26749993 MsG0180001775.01.T01:intron 15.0%
!!! CACTTTTTAAAGTAAATAAT+TGG - Chr1:26750766-26750785 None:intergenic 15.0%
!!! CTTATATTTTTCTAATGTTT+AGG - Chr1:26750408-26750427 None:intergenic 15.0%
!!! GTTAATTTTTTTACTTTTCT+GGG + Chr1:26748485-26748504 MsG0180001775.01.T01:intron 15.0%
!!! TATTTCAGATTTTTATATGT+TGG + Chr1:26748353-26748372 MsG0180001775.01.T01:intron 15.0%
!!! TGTTAATTTTTTTACTTTTC+TGG + Chr1:26748484-26748503 MsG0180001775.01.T01:intron 15.0%
!!! TTGATAATAGAATTACATAA+GGG - Chr1:26751094-26751113 None:intergenic 15.0%
!!! TTTGATAATAGAATTACATA+AGG - Chr1:26751095-26751114 None:intergenic 15.0%
!!! TTTGGTTTCAATTAATATAA+AGG + Chr1:26749973-26749992 MsG0180001775.01.T01:intron 15.0%
!! AACAATTGTAATCATATTGT+TGG - Chr1:26749215-26749234 None:intergenic 20.0%
!! AACAGTTTAATTATCCAAAA+TGG - Chr1:26750649-26750668 None:intergenic 20.0%
!! AACTCATTAAATATTTGCTT+AGG - Chr1:26749500-26749519 None:intergenic 20.0%
!! AATAGGAAAAATATAGTGTA+AGG + Chr1:26748932-26748951 MsG0180001775.01.T01:intron 20.0%
!! ACAACACATTATTATATACA+TGG + Chr1:26750716-26750735 MsG0180001775.01.T01:intron 20.0%
!! ACTCATTAAATATTTGCTTA+GGG - Chr1:26749499-26749518 None:intergenic 20.0%
!! ATAAATTTCGTGAAGATATA+AGG + Chr1:26751867-26751886 MsG0180001775.01.T01:CDS 20.0%
!! ATACTTTCATTATTTATAGG+TGG - Chr1:26748595-26748614 None:intergenic 20.0%
!! ATTACAATTGTTACAATCTT+AGG + Chr1:26749223-26749242 MsG0180001775.01.T01:intron 20.0%
!! ATTGGAACAAAATTAATGAA+AGG - Chr1:26751356-26751375 None:intergenic 20.0%
!! CCAATACTTTCATTATTTAT+AGG - Chr1:26748598-26748617 None:intergenic 20.0%
!! GATGTAACTAGTTATAAATT+AGG - Chr1:26745450-26745469 None:intergenic 20.0%
!! TTAGGATTAATTTATTCTGA+AGG - Chr1:26745693-26745712 None:intergenic 20.0%
!! TTATCAAATTATGTGCAAAT+TGG + Chr1:26751107-26751126 MsG0180001775.01.T01:intron 20.0%
!! TTGGAACAAAATTAATGAAA+GGG - Chr1:26751355-26751374 None:intergenic 20.0%
!! TTTAGTTACTAACTCAAAAA+AGG - Chr1:26748236-26748255 None:intergenic 20.0%
!!! AGATGTAATTTTTTAGTCTA+AGG - Chr1:26750592-26750611 None:intergenic 20.0%
!!! CATTCTTTTTTTTTCTTTTC+TGG + Chr1:26749163-26749182 MsG0180001775.01.T01:intron 20.0%
!!! CATTTTGTCATTTAGTTAAA+AGG + Chr1:26749303-26749322 MsG0180001775.01.T01:intron 20.0%
!!! CCTATAAATAATGAAAGTAT+TGG + Chr1:26748595-26748614 MsG0180001775.01.T01:CDS 20.0%
!!! CTTTTAACTAAATGACAAAA+TGG - Chr1:26749305-26749324 None:intergenic 20.0%
!!! GAAAAGTATAAAGTTTGTTA+TGG + Chr1:26749614-26749633 MsG0180001775.01.T01:CDS 20.0%
!!! TTAATGAGTTTTAACAGAAA+GGG + Chr1:26749510-26749529 MsG0180001775.01.T01:intron 20.0%
!!! TTGTTATTCAAATGATCTTT+TGG + Chr1:26749955-26749974 MsG0180001775.01.T01:intron 20.0%
!!! TTTAATGAGTTTTAACAGAA+AGG + Chr1:26749509-26749528 MsG0180001775.01.T01:intron 20.0%
!!! TTTAGTATAGATTGTTGTTT+CGG - Chr1:26749411-26749430 None:intergenic 20.0%
!!! TTTTAGATATGTTTAGTTTG+TGG - Chr1:26751466-26751485 None:intergenic 20.0%
! AAAAAAAAACAATGTCCTTC+TGG - Chr1:26749119-26749138 None:intergenic 25.0%
! AAAATTAATGAAAGGGTGAT+TGG - Chr1:26751348-26751367 None:intergenic 25.0%
! AAACTTAAATTAGCATCTCT+AGG + Chr1:26745240-26745259 MsG0180001775.01.T01:intron 25.0%
! AAATATAGTGTAAGGTTTAG+AGG + Chr1:26748940-26748959 MsG0180001775.01.T01:intron 25.0%
! AACAAGTAGAGAAATTGAAA+AGG + Chr1:26751733-26751752 MsG0180001775.01.T01:CDS 25.0%
! AACTAGATATCTATAGGATA+GGG - Chr1:26745808-26745827 None:intergenic 25.0%
! AAGACACAAAACAATTATAC+AGG + Chr1:26746156-26746175 MsG0180001775.01.T01:intron 25.0%
! AATAACATAGAAACTTCTCA+TGG - Chr1:26748337-26748356 None:intergenic 25.0%
! AATGGAAAAGTTATTCCTAT+TGG - Chr1:26751258-26751277 None:intergenic 25.0%
! ACAGAATCTCAATTTGAATA+TGG - Chr1:26747078-26747097 None:intergenic 25.0%
! ACATGCAAGATATAAAGATT+CGG + Chr1:26747393-26747412 MsG0180001775.01.T01:intron 25.0%
! AGAAAGAGTTTGATATAGAA+GGG - Chr1:26751296-26751315 None:intergenic 25.0%
! ATCCTAAGTAATTACTACTA+GGG + Chr1:26745509-26745528 MsG0180001775.01.T01:intron 25.0%
! ATGTGTAACTAGATATCTAT+AGG - Chr1:26745814-26745833 None:intergenic 25.0%
! ATTACAAAGAAAGATGTTTG+AGG + Chr1:26746393-26746412 MsG0180001775.01.T01:intron 25.0%
! ATTTGAATTGAAAAGCTTCT+AGG + Chr1:26747246-26747265 MsG0180001775.01.T01:intron 25.0%
! CAAATTAGAAATCAAAGCAA+TGG + Chr1:26751068-26751087 MsG0180001775.01.T01:intron 25.0%
! GAAGAAAAGAAATTGTGTTA+TGG - Chr1:26748462-26748481 None:intergenic 25.0%
! GTTATGTATAAGAGTTACAA+GGG - Chr1:26749016-26749035 None:intergenic 25.0%
! GTTTCAATTAATATAAAGGG+CGG + Chr1:26749977-26749996 MsG0180001775.01.T01:intron 25.0%
! TAACTAGATATCTATAGGAT+AGG - Chr1:26745809-26745828 None:intergenic 25.0%
! TAGAGAATAGAATATGGAAT+AGG + Chr1:26748915-26748934 MsG0180001775.01.T01:intron 25.0%
! TATGTAAGAGATTTGATGTA+AGG + Chr1:26750030-26750049 MsG0180001775.01.T01:intron 25.0%
! TATTCCTATTGGAATAGAAA+TGG - Chr1:26751247-26751266 None:intergenic 25.0%
! TATTTCACACAATAAGTCTT+TGG - Chr1:26747580-26747599 None:intergenic 25.0%
! TGAATGAGAAATTATGAATG+AGG + Chr1:26745945-26745964 MsG0180001775.01.T01:intron 25.0%
! TTAAAACTTACAAGCTTTCA+AGG - Chr1:26747210-26747229 None:intergenic 25.0%
! TTAAAGCAAATATACACATG+TGG + Chr1:26749853-26749872 MsG0180001775.01.T01:intron 25.0%
! TTAGCTACTTGATGAAATTA+TGG + Chr1:26749592-26749611 MsG0180001775.01.T01:intron 25.0%
! TTATCCAACAAAACAAATAG+AGG + Chr1:26745770-26745789 MsG0180001775.01.T01:intron 25.0%
! TTCAAAGTTAATGTCTAGTT+TGG + Chr1:26749932-26749951 MsG0180001775.01.T01:intron 25.0%
! TTGCAATAGAGAATAGAATA+TGG + Chr1:26748909-26748928 MsG0180001775.01.T01:intron 25.0%
! TTTATAACTAGTTACATCCT+AGG + Chr1:26745452-26745471 MsG0180001775.01.T01:intron 25.0%
! TTTCATTATTTATAGGTGGT+GGG - Chr1:26748591-26748610 None:intergenic 25.0%
! TTTGGAAAATGGTAATAAGA+AGG - Chr1:26751608-26751627 None:intergenic 25.0%
!! ATATTATTTTCCAAGTTTGG+TGG - Chr1:26748009-26748028 None:intergenic 25.0%
!! ATTCGAAGTTTAAAGCAAAA+GGG + Chr1:26747368-26747387 MsG0180001775.01.T01:intron 25.0%
!! ATTTGAAATTGATCCTTCAT+AGG - Chr1:26746719-26746738 None:intergenic 25.0%
!! CATTGCTTTGATTTCTAATT+TGG - Chr1:26751070-26751089 None:intergenic 25.0%
!! CGATATTTGATTTATGTGTA+TGG + Chr1:26750155-26750174 MsG0180001775.01.T01:intron 25.0%
!! CTGATATTATTTTCCAAGTT+TGG - Chr1:26748012-26748031 None:intergenic 25.0%
!! TTTTCTTCTCTTTTCTGTTA+GGG + Chr1:26750338-26750357 MsG0180001775.01.T01:intron 25.0%
!! TTTTTCTTCTCTTTTCTGTT+AGG + Chr1:26750337-26750356 MsG0180001775.01.T01:intron 25.0%
!!! AAAAGCTTGTTAACAATTTC+GGG + Chr1:26747628-26747647 MsG0180001775.01.T01:intron 25.0%
!!! ACATTGTTGTTTTTAGTTGA+AGG + Chr1:26747535-26747554 MsG0180001775.01.T01:intron 25.0%
!!! ACGATGAGTTTTATTTTTTG+AGG - Chr1:26751549-26751568 None:intergenic 25.0%
!!! CAAATCAAATCGATTTTATG+TGG + Chr1:26751036-26751055 MsG0180001775.01.T01:intron 25.0%
!!! GAAAAGCTTGTTAACAATTT+CGG + Chr1:26747627-26747646 MsG0180001775.01.T01:intron 25.0%
!!! GTTCGCTATTAAGTTTTATT+AGG - Chr1:26745711-26745730 None:intergenic 25.0%
!!! TGGTTTATTTTGAAGTTTTG+CGG + Chr1:26750084-26750103 MsG0180001775.01.T01:intron 25.0%
!!! TTAAACATTGTGCGATTTTT+TGG + Chr1:26749381-26749400 MsG0180001775.01.T01:intron 25.0%
!!! TTAACCTCTATTTGTTTTGT+TGG - Chr1:26745777-26745796 None:intergenic 25.0%
!!! TTAGTTTGTGGAATTTTGAT+TGG - Chr1:26751454-26751473 None:intergenic 25.0%
AAAAAAAGACAAACACTAGC+TGG - Chr1:26749776-26749795 None:intergenic 30.0%
AAACATACCCTAGAAAACTT+AGG + Chr1:26745863-26745882 MsG0180001775.01.T01:intron 30.0%
AACACTTGATATACAATCAG+TGG + Chr1:26746419-26746438 MsG0180001775.01.T01:intron 30.0%
AATGGTTCTCAATTTCATGA+AGG - Chr1:26751229-26751248 None:intergenic 30.0%
AGAACCATTTCTATTCCAAT+AGG + Chr1:26751240-26751259 MsG0180001775.01.T01:intron 30.0%
AGAATTTCTTGTTCTCAATG+CGG + Chr1:26748273-26748292 MsG0180001775.01.T01:intron 30.0%
AGGAAAGCTAAATTCTGTAA+AGG - Chr1:26750504-26750523 None:intergenic 30.0%
ATACTAATAACTACCTGTCT+AGG - Chr1:26745581-26745600 None:intergenic 30.0%
ATCATACTGCTAAATCTGAT+TGG + Chr1:26749725-26749744 MsG0180001775.01.T01:intron 30.0%
ATGCAAAACTTAAAGCTTCA+AGG - Chr1:26746972-26746991 None:intergenic 30.0%
CAATGATGTAGATACTTTAG+AGG + Chr1:26751775-26751794 MsG0180001775.01.T01:CDS 30.0%
CAGTATGATTAGGTTATGTT+TGG - Chr1:26749714-26749733 None:intergenic 30.0%
CATAATTTCTCATTCAGAAC+CGG - Chr1:26745941-26745960 None:intergenic 30.0%
CATCCTAAGTAATTACTACT+AGG + Chr1:26745508-26745527 MsG0180001775.01.T01:intron 30.0%
CATGCAAGATATAAAGATTC+GGG + Chr1:26747394-26747413 MsG0180001775.01.T01:intron 30.0%
CTTACATTCATCTTCTGATT+TGG + Chr1:26748383-26748402 MsG0180001775.01.T01:intron 30.0%
CTTTCATTATTTATAGGTGG+TGG - Chr1:26748592-26748611 None:intergenic 30.0%
GACAGGTAGTTATTAGTATA+AGG + Chr1:26745582-26745601 MsG0180001775.01.T01:intron 30.0%
GAGAAAGAGTTTGATATAGA+AGG - Chr1:26751297-26751316 None:intergenic 30.0%
GGAAAATAATATCAGATCAC+AGG + Chr1:26748017-26748036 MsG0180001775.01.T01:CDS 30.0%
GGGAACTTCAAAAAATATTG+AGG + Chr1:26747414-26747433 MsG0180001775.01.T01:intron 30.0%
GGTTATGTATAAGAGTTACA+AGG - Chr1:26749017-26749036 None:intergenic 30.0%
GTCATTGAACAATTTGAACA+CGG + Chr1:26748075-26748094 MsG0180001775.01.T01:CDS 30.0%
TATACTATCTCGTTTGATCT+AGG + Chr1:26745129-26745148 MsG0180001775.01.T01:CDS 30.0%
TCAAAATACCTCTTCTGTTA+TGG - Chr1:26747503-26747522 None:intergenic 30.0%
TCAGATTTAGCAGTATGATT+AGG - Chr1:26749724-26749743 None:intergenic 30.0%
TCATACTGCTAAATCTGATT+GGG + Chr1:26749726-26749745 MsG0180001775.01.T01:intron 30.0%
TCTCTATTCTCAAACTCATT+CGG + Chr1:26751658-26751677 MsG0180001775.01.T01:CDS 30.0%
TCTTTCACACCTCTATATAA+AGG - Chr1:26746609-26746628 None:intergenic 30.0%
TGAGAAATTATGAATGAGGA+AGG + Chr1:26745949-26745968 MsG0180001775.01.T01:intron 30.0%
TGCAAAACTTAAAGCTTCAA+GGG - Chr1:26746971-26746990 None:intergenic 30.0%
! ATCTTCTCCTAAGTTTTCTA+GGG - Chr1:26745873-26745892 None:intergenic 30.0%
! CAAGCTTTTCATTTCACATT+AGG - Chr1:26747617-26747636 None:intergenic 30.0%
! GATTCGAAGTTTAAAGCAAA+AGG + Chr1:26747367-26747386 MsG0180001775.01.T01:intron 30.0%
! TATCTTCTCCTAAGTTTTCT+AGG - Chr1:26745874-26745893 None:intergenic 30.0%
! TTTCTTCTCTTTTCTGTTAG+GGG + Chr1:26750339-26750358 MsG0180001775.01.T01:intron 30.0%
! TTTTGATAGAATTGACAGCA+TGG - Chr1:26750560-26750579 None:intergenic 30.0%
!! CAAAGCTTTTGTTTGGAAAA+TGG - Chr1:26751619-26751638 None:intergenic 30.0%
!! CAGTTGGTTAATTTGTGTAT+TGG + Chr1:26748409-26748428 MsG0180001775.01.T01:intron 30.0%
!! CTTTGTTTAGTTCTACAAGT+TGG - Chr1:26751164-26751183 None:intergenic 30.0%
!! GAGTAAAATTTGTTGAACCT+AGG - Chr1:26745472-26745491 None:intergenic 30.0%
!! GTCATTTTGAAAGGATTTGA+AGG - Chr1:26746889-26746908 None:intergenic 30.0%
!! TGTTACAACTTATGCCATTT+TGG + Chr1:26750632-26750651 MsG0180001775.01.T01:intron 30.0%
!!! AACTTTTTTATGTGTCCCTA+TGG - Chr1:26750440-26750459 None:intergenic 30.0%
!!! ACTTTTTTATGTGTCCCTAT+GGG - Chr1:26750439-26750458 None:intergenic 30.0%
!!! TTTTTTGTCAAGTTGTCTAG+TGG - Chr1:26750797-26750816 None:intergenic 30.0%
AAGAAAGCGACTTAAGTATG+TGG + Chr1:26750123-26750142 MsG0180001775.01.T01:intron 35.0%
AAGGTGAGAAAAACACAAGA+AGG + Chr1:26746001-26746020 MsG0180001775.01.T01:intron 35.0%
AAGTAAATAATTGGCGTGTC+TGG - Chr1:26750757-26750776 None:intergenic 35.0%
AATGTTGCAAGTGGATCAAA+AGG + Chr1:26751829-26751848 MsG0180001775.01.T01:CDS 35.0%
AATTACTACTAGGGTCAACT+CGG + Chr1:26745518-26745537 MsG0180001775.01.T01:intron 35.0%
AATTTCTTGTTCTCAATGCG+GGG + Chr1:26748275-26748294 MsG0180001775.01.T01:intron 35.0%
ACAAAGATAGGGTGTATAGA+AGG + Chr1:26748560-26748579 MsG0180001775.01.T01:CDS 35.0%
ACAACCTAAGTACCTAATCT+AGG + Chr1:26745660-26745679 MsG0180001775.01.T01:intron 35.0%
ACCTCAGAAAAACGGTATAA+CGG - Chr1:26749250-26749269 None:intergenic 35.0%
AGACTGAAAGAGTAAAGCAA+CGG - Chr1:26746911-26746930 None:intergenic 35.0%
AGAGTGAAAGAATGTGTTGA+AGG - Chr1:26751502-26751521 None:intergenic 35.0%
AGGAAACAATGAAGTTTCTG+AGG + Chr1:26747906-26747925 MsG0180001775.01.T01:CDS 35.0%
AGTAAATAATTGGCGTGTCT+GGG - Chr1:26750756-26750775 None:intergenic 35.0%
AGTGTCCTAAGATTCATAGA+TGG - Chr1:26745306-26745325 None:intergenic 35.0%
ATAAGAGTTACAAGGGCAAA+AGG - Chr1:26749009-26749028 None:intergenic 35.0%
ATATAAGAAATGGACCCCAT+AGG + Chr1:26750421-26750440 MsG0180001775.01.T01:intron 35.0%
ATATAGAAGGGTTGAGAGAA+TGG - Chr1:26751284-26751303 None:intergenic 35.0%
ATATGGTTGTTGTCCTATGA+AGG + Chr1:26746703-26746722 MsG0180001775.01.T01:intron 35.0%
CAACAATGTTCCTTCACAAT+GGG - Chr1:26746747-26746766 None:intergenic 35.0%
CACATAAAAAAGTTGCATCC+AGG + Chr1:26750446-26750465 MsG0180001775.01.T01:intron 35.0%
CATATCAGGCAAAAGATCAT+TGG - Chr1:26746688-26746707 None:intergenic 35.0%
CATTGCTTGAATTTCATGAG+AGG + Chr1:26751906-26751925 MsG0180001775.01.T01:CDS 35.0%
CCATTTGTAGAACTACTTAG+GGG - Chr1:26745348-26745367 None:intergenic 35.0%
CCCATTTGTAGAACTACTTA+GGG - Chr1:26745349-26745368 None:intergenic 35.0%
CTCGTATTTATCAACTACAG+CGG + Chr1:26747978-26747997 MsG0180001775.01.T01:CDS 35.0%
CTGACAATACCTCAGAAAAA+CGG - Chr1:26749258-26749277 None:intergenic 35.0%
GAAATTATGAATGAGGAAGG+CGG + Chr1:26745952-26745971 MsG0180001775.01.T01:intron 35.0%
GAAGTCTCTTGATTGTGTTT+AGG - Chr1:26746331-26746350 None:intergenic 35.0%
GAATTTCTTGTTCTCAATGC+GGG + Chr1:26748274-26748293 MsG0180001775.01.T01:intron 35.0%
GACCCTAGTAGTAATTACTT+AGG - Chr1:26745514-26745533 None:intergenic 35.0%
GAGTGAAAGAATGTGTTGAA+GGG - Chr1:26751501-26751520 None:intergenic 35.0%
GATTAAATGTAACCACGTGT+TGG + Chr1:26748795-26748814 MsG0180001775.01.T01:intron 35.0%
GTATAGTAGGTTCTTGAGTA+GGG + Chr1:26749461-26749480 MsG0180001775.01.T01:intron 35.0%
GTCTTCACTCCTTTATATAG+AGG + Chr1:26746597-26746616 MsG0180001775.01.T01:intron 35.0%
GTGGAGCAATAACAAAGATA+GGG + Chr1:26748549-26748568 MsG0180001775.01.T01:CDS 35.0%
GTGTCCTAAGATTCATAGAT+GGG - Chr1:26745305-26745324 None:intergenic 35.0%
TATAAGAAATGGACCCCATA+GGG + Chr1:26750422-26750441 MsG0180001775.01.T01:intron 35.0%
TATTGAGGAAGCCAATCTAT+TGG + Chr1:26747429-26747448 MsG0180001775.01.T01:intron 35.0%
TCTGACTGTTTCGTAGATTT+AGG - Chr1:26748882-26748901 None:intergenic 35.0%
TCTTCAAACGTGTTAGATTC+AGG + Chr1:26748139-26748158 MsG0180001775.01.T01:CDS 35.0%
TCTTCCCATCTATGAATCTT+AGG + Chr1:26745298-26745317 MsG0180001775.01.T01:intron 35.0%
TGCTAAGTATGGTGAGAATA+AGG - Chr1:26750524-26750543 None:intergenic 35.0%
TGTATAGTAGGTTCTTGAGT+AGG + Chr1:26749460-26749479 MsG0180001775.01.T01:intron 35.0%
TGTCACATGTGATGTATAGT+AGG + Chr1:26749448-26749467 MsG0180001775.01.T01:intron 35.0%
TTAATATAAAGGGCGGTAAC+TGG + Chr1:26749984-26750003 MsG0180001775.01.T01:intron 35.0%
TTCATGCGTGACATGTTAAT+TGG - Chr1:26751374-26751393 None:intergenic 35.0%
TTCTAAGCATAGAGAAGCAA+AGG + Chr1:26747465-26747484 MsG0180001775.01.T01:intron 35.0%
TTGAGCATGAATCACTTTCA+AGG - Chr1:26747752-26747771 None:intergenic 35.0%
! AACTCTCCTTGAAAGTACAA+GGG - Chr1:26746213-26746232 None:intergenic 35.0%
! ATAGCTGCAAAGCTTTTGTT+TGG - Chr1:26751626-26751645 None:intergenic 35.0%
! CAATGATCTTTTGCCTGATA+TGG + Chr1:26746686-26746705 MsG0180001775.01.T01:intron 35.0%
! CCCTAAGTAGTTCTACAAAT+GGG + Chr1:26745346-26745365 MsG0180001775.01.T01:intron 35.0%
! TACAGGTTACTTTCACAAAC+CGG + Chr1:26746173-26746192 MsG0180001775.01.T01:intron 35.0%
! TAGATACTTTAGAGGATGCA+TGG + Chr1:26751783-26751802 MsG0180001775.01.T01:CDS 35.0%
! TAGGTACTTAGGTTGTTACA+GGG - Chr1:26745656-26745675 None:intergenic 35.0%
! TCAACATTTTCTTCACCATG+AGG - Chr1:26748637-26748656 None:intergenic 35.0%
! TTAGGTACTTAGGTTGTTAC+AGG - Chr1:26745657-26745676 None:intergenic 35.0%
! TTCTTCTCTTTTCTGTTAGG+GGG + Chr1:26750340-26750359 MsG0180001775.01.T01:intron 35.0%
! TTGAAAGGATTTGAAGGCAT+TGG - Chr1:26746883-26746902 None:intergenic 35.0%
! TTGATTGTGTTTAGGAGCAT+AGG - Chr1:26746323-26746342 None:intergenic 35.0%
! TTTTGATCCACTTGCAACAT+TGG - Chr1:26751830-26751849 None:intergenic 35.0%
!! AAAGCAACGGTCATTTTGAA+AGG - Chr1:26746898-26746917 None:intergenic 35.0%
!! TTAGTTAAAAGGTGTCTCAG+TGG + Chr1:26749314-26749333 MsG0180001775.01.T01:intron 35.0%
!!! CTTTTTTATGTGTCCCTATG+GGG - Chr1:26750438-26750457 None:intergenic 35.0%
!!! TTTTTTATGCACACTCGAGT+GGG - Chr1:26750188-26750207 None:intergenic 35.0%
!!! TTTTTTTATGCACACTCGAG+TGG - Chr1:26750189-26750208 None:intergenic 35.0%
AACTGCACATGTTAATCGCA+CGG + Chr1:26745170-26745189 MsG0180001775.01.T01:CDS 40.0%
AAGTCTGCAAGAGCAAAGAT+TGG + Chr1:26747882-26747901 MsG0180001775.01.T01:CDS 40.0%
ACAGCCATAGTAATACCTGA+TGG + Chr1:26748108-26748127 MsG0180001775.01.T01:CDS 40.0%
ACTTTCAAGGTTTCACTTCC+AGG - Chr1:26747739-26747758 None:intergenic 40.0%
AGGAGTGAAGACTTAGAGAT+TGG - Chr1:26746589-26746608 None:intergenic 40.0%
ATCTACGAAACAGTCAGAGA+AGG + Chr1:26748884-26748903 MsG0180001775.01.T01:intron 40.0%
ATGTTCCTTCACAATGGGAA+TGG - Chr1:26746742-26746761 None:intergenic 40.0%
ATTAGGGAAACAAGCACCAA+AGG - Chr1:26745433-26745452 None:intergenic 40.0%
ATTAGTCATGCTCATGCACA+AGG + Chr1:26751707-26751726 MsG0180001775.01.T01:CDS 40.0%
CAAATAGAGTTCTGCTTCTG+AGG + Chr1:26746083-26746102 MsG0180001775.01.T01:intron 40.0%
CAAATCCATTCCCATTGTGA+AGG + Chr1:26746734-26746753 MsG0180001775.01.T01:intron 40.0%
CAATCACTTACTTCCTAGAC+AGG + Chr1:26745565-26745584 MsG0180001775.01.T01:intron 40.0%
CAGACTTGAAGAGTCACTAT+CGG - Chr1:26747869-26747888 None:intergenic 40.0%
CATAGGACAACAACCATATC+AGG - Chr1:26746702-26746721 None:intergenic 40.0%
CATCAAGTCCATAACAGAAG+AGG + Chr1:26747492-26747511 MsG0180001775.01.T01:intron 40.0%
CATGGGAAAACCTATACTTG+TGG + Chr1:26750478-26750497 MsG0180001775.01.T01:intron 40.0%
CTATCACTTTCCAAGCAAAG+TGG + Chr1:26749637-26749656 MsG0180001775.01.T01:CDS 40.0%
CTTGTCTAATTCGCTACACT+TGG - Chr1:26748675-26748694 None:intergenic 40.0%
GAAAGGGTGATTGGTATGAT+TGG - Chr1:26751339-26751358 None:intergenic 40.0%
GAAGTTCTTCCATGCTTTCT+TGG - Chr1:26751420-26751439 None:intergenic 40.0%
GAGAAGATATAACTCCTCCT+TGG + Chr1:26745885-26745904 MsG0180001775.01.T01:intron 40.0%
GAGGTTGTTCCATCAACAAA+TGG + Chr1:26747925-26747944 MsG0180001775.01.T01:CDS 40.0%
GCAACAATGTTCCTTCACAA+TGG - Chr1:26746748-26746767 None:intergenic 40.0%
GCAACCTAGATTAGGTACTT+AGG - Chr1:26745667-26745686 None:intergenic 40.0%
GCAAGGTCTTGCTAATTCAA+AGG + Chr1:26745205-26745224 MsG0180001775.01.T01:intron 40.0%
GCCCATTTGTAGAACTACTT+AGG - Chr1:26745350-26745369 None:intergenic 40.0%
GGTGGAGCAATAACAAAGAT+AGG + Chr1:26748548-26748567 MsG0180001775.01.T01:CDS 40.0%
GTAAATAATTGGCGTGTCTG+GGG - Chr1:26750755-26750774 None:intergenic 40.0%
GTGAGAAAAACACAAGAAGG+AGG + Chr1:26746004-26746023 MsG0180001775.01.T01:intron 40.0%
GTTGTTCCATCAACAAATGG+AGG + Chr1:26747928-26747947 MsG0180001775.01.T01:CDS 40.0%
TAACATGTGCAGTTAGCCAT+CGG - Chr1:26745164-26745183 None:intergenic 40.0%
TAGCATCTCTAGGTTTCCAT+AGG + Chr1:26745250-26745269 MsG0180001775.01.T01:intron 40.0%
TATCTAGAGGTCGAGGATAA+TGG + Chr1:26745390-26745409 MsG0180001775.01.T01:intron 40.0%
TATCTCCAACAAGTCTAGAG+AGG + Chr1:26749071-26749090 MsG0180001775.01.T01:intron 40.0%
TCAGTCTCAGTGCTTCATAA+TGG - Chr1:26748716-26748735 None:intergenic 40.0%
TCTGTAAAGGCCACAAGTAT+AGG - Chr1:26750491-26750510 None:intergenic 40.0%
TGAAGACTTAGAGATTGGTG+CGG - Chr1:26746584-26746603 None:intergenic 40.0%
TGAGGTTATGAGATGAGTGA+GGG - Chr1:26751531-26751550 None:intergenic 40.0%
TTAGGGAAACAAGCACCAAA+GGG - Chr1:26745432-26745451 None:intergenic 40.0%
TTATCCTCGACCTCTAGATA+AGG - Chr1:26745390-26745409 None:intergenic 40.0%
TTGAGGTTATGAGATGAGTG+AGG - Chr1:26751532-26751551 None:intergenic 40.0%
TTGTGAAGGAACATTGTTGC+AGG + Chr1:26746748-26746767 MsG0180001775.01.T01:intron 40.0%
! ACATTTTCTTCACCATGAGG+TGG - Chr1:26748634-26748653 None:intergenic 40.0%
! ACTCTCCTTGAAAGTACAAG+GGG - Chr1:26746212-26746231 None:intergenic 40.0%
! ATTTTCTTCACCATGAGGTG+GGG - Chr1:26748632-26748651 None:intergenic 40.0%
! CAAGTATAGGTTTTCCCATG+TGG - Chr1:26750478-26750497 None:intergenic 40.0%
! CATTTTCTTCACCATGAGGT+GGG - Chr1:26748633-26748652 None:intergenic 40.0%
! CCCCTAAGTAGTTCTACAAA+TGG + Chr1:26745345-26745364 MsG0180001775.01.T01:intron 40.0%
! CTGATCAGTGTTTTCAGCTT+AGG - Chr1:26746060-26746079 None:intergenic 40.0%
! GAACTCTCCTTGAAAGTACA+AGG - Chr1:26746214-26746233 None:intergenic 40.0%
! GCTTGTTAACAATTTCGGGT+TGG + Chr1:26747632-26747651 MsG0180001775.01.T01:intron 40.0%
! TCATCTCCTCCATTTGTTGA+TGG - Chr1:26747937-26747956 None:intergenic 40.0%
! TCGAGGATAATGGTCTTACT+AGG + Chr1:26745400-26745419 MsG0180001775.01.T01:intron 40.0%
! TGTTCAGGACTAATTTGCAG+CGG + Chr1:26746109-26746128 MsG0180001775.01.T01:intron 40.0%
! TTGTGTTTTTCTCACCTTCG+AGG - Chr1:26745999-26746018 None:intergenic 40.0%
! TTTTTATGCACACTCGAGTG+GGG - Chr1:26750187-26750206 None:intergenic 40.0%
!! TCCGTTATACCGTTTTTCTG+AGG + Chr1:26749246-26749265 MsG0180001775.01.T01:intron 40.0%
!! TCTTCTGATTTGGTGACAGT+TGG + Chr1:26748393-26748412 MsG0180001775.01.T01:intron 40.0%
!! TTTACTTTTCTGGGAGCAGT+AGG + Chr1:26748494-26748513 MsG0180001775.01.T01:intron 40.0%
AAGCTTCAAGGGCTGTTCAA+TGG - Chr1:26746960-26746979 None:intergenic 45.0%
ACCAGAAGCTGAAGTTCATC+AGG - Chr1:26746997-26747016 None:intergenic 45.0%
AGACAGAAACAGAGTAGTGG+AGG + Chr1:26746799-26746818 MsG0180001775.01.T01:intron 45.0%
AGCAACAAGCAGAAGAATGG+TGG + Chr1:26748530-26748549 MsG0180001775.01.T01:CDS 45.0%
AGGCTGGTAGTACATGAATG+AGG + Chr1:26749091-26749110 MsG0180001775.01.T01:intron 45.0%
ATCTAGGTTTATCCCTCCGA+TGG + Chr1:26745145-26745164 MsG0180001775.01.T01:CDS 45.0%
ATGAGGAAGGCGGTATTTGA+AGG + Chr1:26745962-26745981 MsG0180001775.01.T01:intron 45.0%
CAGAGACAGAAACAGAGTAG+TGG + Chr1:26746796-26746815 MsG0180001775.01.T01:intron 45.0%
CATGGCAAGTAGTGGTTTCT+AGG + Chr1:26751801-26751820 MsG0180001775.01.T01:CDS 45.0%
CTATCGGATGCTGGTATATC+AGG - Chr1:26747853-26747872 None:intergenic 45.0%
CTCACCATACTTAGCAACCA+AGG + Chr1:26750528-26750547 MsG0180001775.01.T01:intron 45.0%
CTGAAGGCCAATGTTCTCTA+AGG + Chr1:26745275-26745294 MsG0180001775.01.T01:intron 45.0%
CTGCAAGAGCAAAGATTGGA+AGG + Chr1:26747886-26747905 MsG0180001775.01.T01:CDS 45.0%
CTTACTAGGTTCACTCCCTT+TGG + Chr1:26745414-26745433 MsG0180001775.01.T01:intron 45.0%
GCTGCCATCAGGTATTACTA+TGG - Chr1:26748115-26748134 None:intergenic 45.0%
GGGAAGACCTTAGAGAACAT+TGG - Chr1:26745285-26745304 None:intergenic 45.0%
GGGTTGAGAGAATGGCTTAA+TGG - Chr1:26751276-26751295 None:intergenic 45.0%
GTAGAACTACTTAGGGGAGA+AGG - Chr1:26745342-26745361 None:intergenic 45.0%
GTGAGCAACAAGCAGAAGAA+TGG + Chr1:26748527-26748546 MsG0180001775.01.T01:CDS 45.0%
GTTTCACTTCCAGGAATCTC+TGG - Chr1:26747730-26747749 None:intergenic 45.0%
TACTAGGGTCAACTCGGTTT+CGG + Chr1:26745524-26745543 MsG0180001775.01.T01:intron 45.0%
TAGGTCTCCAATGTTGCAAG+TGG + Chr1:26751820-26751839 MsG0180001775.01.T01:CDS 45.0%
TAGTATAGACCCTGCACGTA+AGG - Chr1:26745116-26745135 None:intergenic 45.0%
TCAAACCAGCCAAGAAAGCA+TGG + Chr1:26751408-26751427 MsG0180001775.01.T01:intron 45.0%
TCAGCGTCTACCTTATCTAG+AGG + Chr1:26745377-26745396 MsG0180001775.01.T01:intron 45.0%
TCCTGATGAACTTCAGCTTC+TGG + Chr1:26746993-26747012 MsG0180001775.01.T01:intron 45.0%
TCGCTACACTTGGTTGATTG+AGG - Chr1:26748665-26748684 None:intergenic 45.0%
TCTACCTTATCTAGAGGTCG+AGG + Chr1:26745383-26745402 MsG0180001775.01.T01:intron 45.0%
TGAGGAAGGCGGTATTTGAA+GGG + Chr1:26745963-26745982 MsG0180001775.01.T01:intron 45.0%
TGTTGCTCAGACTCGAAACT+CGG - Chr1:26747823-26747842 None:intergenic 45.0%
TTAGCAAGACCTTGCACGTA+AGG - Chr1:26745200-26745219 None:intergenic 45.0%
TTCAGGAGGAAGGCGATTAT+AGG - Chr1:26745913-26745932 None:intergenic 45.0%
TTCCTCTCCTGCCAATAGAT+TGG - Chr1:26747443-26747462 None:intergenic 45.0%
TTCTTCCATGCTTTCTTGGC+TGG - Chr1:26751416-26751435 None:intergenic 45.0%
TTGAAGACTTTGCTGCCATC+AGG - Chr1:26748126-26748145 None:intergenic 45.0%
TTGGGACGTTCTAACCTAGT+GGG + Chr1:26745057-26745076 MsG0180001775.01.T01:CDS 45.0%
! AAACAGAGTAGTGGAGGTAG+TGG + Chr1:26746805-26746824 MsG0180001775.01.T01:intron 45.0%
! ATGTAACCACGTGTTGGTGT+CGG + Chr1:26748801-26748820 MsG0180001775.01.T01:intron 45.0%
! CTCTCCTTGAAAGTACAAGG+GGG - Chr1:26746211-26746230 None:intergenic 45.0%
! GAAGGAGTGCAACCTAGATT+AGG - Chr1:26745675-26745694 None:intergenic 45.0%
! TACATGAATGAGGTGCCAGA+AGG + Chr1:26749101-26749120 MsG0180001775.01.T01:intron 45.0%
! TGTTTTTCTCACCTTCGAGG+TGG - Chr1:26745996-26746015 None:intergenic 45.0%
!! TAGGTTTCCATAGGCACTGA+AGG + Chr1:26745259-26745278 MsG0180001775.01.T01:intron 45.0%
!! TTGGTGTCGGAACACTAACA+CGG + Chr1:26748814-26748833 MsG0180001775.01.T01:intron 45.0%
!! ATATAATAAAACTAAAAAAT+AGG + Chr1:26751192-26751211 MsG0180001775.01.T01:intron 5.0%
!! ATTAAAAAAAACTTATTAAT+GGG - Chr1:26747328-26747347 None:intergenic 5.0%
!! GAAAAAAAATATTAATATAA+AGG - Chr1:26749915-26749934 None:intergenic 5.0%
!! TATTAAAAAAAACTTATTAA+TGG - Chr1:26747329-26747348 None:intergenic 5.0%
!! TTATAAATAGTAATTTAAAA+TGG + Chr1:26750064-26750083 MsG0180001775.01.T01:intron 5.0%
AAGTTGCCACCAGAGATTCC+TGG + Chr1:26747718-26747737 MsG0180001775.01.T01:CDS 50.0%
ACCAGCCTCTCTAGACTTGT+TGG - Chr1:26749079-26749098 None:intergenic 50.0%
AGACTCGAAACTCGGTTGGA+AGG - Chr1:26747815-26747834 None:intergenic 50.0%
AGAGGATGCATGGCAAGTAG+TGG + Chr1:26751793-26751812 MsG0180001775.01.T01:CDS 50.0%
AGCCAATCTATTGGCAGGAG+AGG + Chr1:26747438-26747457 MsG0180001775.01.T01:intron 50.0%
AGGGAAAGTTTCCACCTCGA+AGG + Chr1:26745982-26746001 MsG0180001775.01.T01:intron 50.0%
ATGTGCAGTTAGCCATCGGA+GGG - Chr1:26745160-26745179 None:intergenic 50.0%
ATTCAGAACCGGAGCAGTTC+AGG - Chr1:26745930-26745949 None:intergenic 50.0%
CCAAGCAAAGTGGAAGCAAG+TGG + Chr1:26749647-26749666 MsG0180001775.01.T01:CDS 50.0%
CCACTTGCTTCCACTTTGCT+TGG - Chr1:26749650-26749669 None:intergenic 50.0%
CTGTCCCCCTTGTACTTTCA+AGG + Chr1:26746204-26746223 MsG0180001775.01.T01:intron 50.0%
GAAGAGTCACTATCGGATGC+TGG - Chr1:26747862-26747881 None:intergenic 50.0%
GAAGGCGATTATAGGAGCCA+AGG - Chr1:26745905-26745924 None:intergenic 50.0%
GACGTTTCTCCTTCTCTCAC+AGG - Chr1:26748054-26748073 None:intergenic 50.0%
GAGGAAGCCAATCTATTGGC+AGG + Chr1:26747433-26747452 MsG0180001775.01.T01:intron 50.0%
GCAGCCTTGGTTGCTAAGTA+TGG - Chr1:26750535-26750554 None:intergenic 50.0%
GTTGGGACGTTCTAACCTAG+TGG + Chr1:26745056-26745075 MsG0180001775.01.T01:CDS 50.0%
TCACTTCCAGGAATCTCTGG+TGG - Chr1:26747727-26747746 None:intergenic 50.0%
TCCAACAAGTCTAGAGAGGC+TGG + Chr1:26749075-26749094 MsG0180001775.01.T01:intron 50.0%
! CTCTTTTCTGTTAGGGGGAG+CGG + Chr1:26750345-26750364 MsG0180001775.01.T01:intron 50.0%
! CTTGAAAGTACAAGGGGGAC+AGG - Chr1:26746206-26746225 None:intergenic 50.0%
! TCTTTTCTGTTAGGGGGAGC+GGG + Chr1:26750346-26750365 MsG0180001775.01.T01:intron 50.0%
!! ACATTGGCCTTCAGTGCCTA+TGG - Chr1:26745269-26745288 None:intergenic 50.0%
!! CTGCAGGTTGATAACCCACT+AGG - Chr1:26745074-26745093 None:intergenic 50.0%
!! CTGCTTCTGAGGTGATGTTC+AGG + Chr1:26746094-26746113 MsG0180001775.01.T01:intron 50.0%
AAGGGGGACAGGACTACTTC+CGG - Chr1:26746195-26746214 None:intergenic 55.0%
AAGTGGAAGCAAGTGGCTGG+TGG + Chr1:26749654-26749673 MsG0180001775.01.T01:CDS 55.0%
ACCTGCAGCTGTTGATCGCA+CGG + Chr1:26745086-26745105 MsG0180001775.01.T01:CDS 55.0%
AGCGGTGTCTCCACCAAACT+TGG + Chr1:26747996-26748015 MsG0180001775.01.T01:CDS 55.0%
AGTGTTCCGACACCAACACG+TGG - Chr1:26748810-26748829 None:intergenic 55.0%
CAAGTGGCTGGTGGTATGTG+AGG + Chr1:26749663-26749682 MsG0180001775.01.T01:intron 55.0%
CACGGTGATCCTTACGTGCA+AGG + Chr1:26745104-26745123 MsG0180001775.01.T01:CDS 55.0%
CACGGTGATCCTTACGTGCA+GGG + Chr1:26745104-26745123 MsG0180001775.01.T01:CDS 55.0%
CATCCAGGCACACACCACAT+GGG + Chr1:26750461-26750480 MsG0180001775.01.T01:intron 55.0%
CATGTGCAGTTAGCCATCGG+AGG - Chr1:26745161-26745180 None:intergenic 55.0%
GCAAAGTGGAAGCAAGTGGC+TGG + Chr1:26749651-26749670 MsG0180001775.01.T01:CDS 55.0%
GCTCAGACTCGAAACTCGGT+TGG - Chr1:26747819-26747838 None:intergenic 55.0%
GGCGATTATAGGAGCCAAGG+AGG - Chr1:26745902-26745921 None:intergenic 55.0%
TCAGATCACAGGAGTCGTCC+AGG + Chr1:26748028-26748047 MsG0180001775.01.T01:CDS 55.0%
TCATCTAGCACCCCACCTCA+TGG + Chr1:26748619-26748638 MsG0180001775.01.T01:CDS 55.0%
TGACAGCATGGAAGCAGCCT+TGG - Chr1:26750548-26750567 None:intergenic 55.0%
TTCTCCTTCTCTCACAGGCC+TGG - Chr1:26748049-26748068 None:intergenic 55.0%
TTTCCCATGTGGTGTGTGCC+TGG - Chr1:26750467-26750486 None:intergenic 55.0%
! CTTTTCTGTTAGGGGGAGCG+GGG + Chr1:26750347-26750366 MsG0180001775.01.T01:intron 55.0%
ACCGGAGCAGTTCAGGAGGA+AGG - Chr1:26745923-26745942 None:intergenic 60.0%
ACCGTGCGATCAACAGCTGC+AGG - Chr1:26745090-26745109 None:intergenic 60.0%
CAGAACCGGAGCAGTTCAGG+AGG - Chr1:26745927-26745946 None:intergenic 60.0%
GCACGGTGATCCTTACGTGC+AGG + Chr1:26745103-26745122 MsG0180001775.01.T01:CDS 60.0%
GCATCCAGGCACACACCACA+TGG + Chr1:26750460-26750479 MsG0180001775.01.T01:intron 60.0%
GCCTTCCTCCTGAACTGCTC+CGG + Chr1:26745919-26745938 MsG0180001775.01.T01:intron 60.0%
TCGTCCAGGCCTGTGAGAGA+AGG + Chr1:26748042-26748061 MsG0180001775.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 26745048 26751946 26745048 ID=MsG0180001775.01;Name=MsG0180001775.01
Chr1 mRNA 26745048 26751946 26745048 ID=MsG0180001775.01.T01;Parent=MsG0180001775.01;Name=MsG0180001775.01.T01;_AED=0.57;_eAED=0.57;_QI=0|0|0|0.6|1|1|5|0|383
Chr1 exon 26745048 26745191 26745048 ID=MsG0180001775.01.T01:exon:35132;Parent=MsG0180001775.01.T01
Chr1 exon 26747700 26748160 26747700 ID=MsG0180001775.01.T01:exon:35131;Parent=MsG0180001775.01.T01
Chr1 exon 26748516 26748677 26748516 ID=MsG0180001775.01.T01:exon:35130;Parent=MsG0180001775.01.T01
Chr1 exon 26749596 26749675 26749596 ID=MsG0180001775.01.T01:exon:35129;Parent=MsG0180001775.01.T01
Chr1 exon 26751642 26751946 26751642 ID=MsG0180001775.01.T01:exon:35128;Parent=MsG0180001775.01.T01
Chr1 CDS 26745048 26745191 26745048 ID=MsG0180001775.01.T01:cds;Parent=MsG0180001775.01.T01
Chr1 CDS 26747700 26748160 26747700 ID=MsG0180001775.01.T01:cds;Parent=MsG0180001775.01.T01
Chr1 CDS 26748516 26748677 26748516 ID=MsG0180001775.01.T01:cds;Parent=MsG0180001775.01.T01
Chr1 CDS 26749596 26749675 26749596 ID=MsG0180001775.01.T01:cds;Parent=MsG0180001775.01.T01
Chr1 CDS 26751642 26751946 26751642 ID=MsG0180001775.01.T01:cds;Parent=MsG0180001775.01.T01
Gene Sequence

>MsG0180001775.01.T01

ATGAGGTTGTTGGGACGTTCTAACCTAGTGGGTTATCAACCTGCAGCTGTTGATCGCACGGTGATCCTTACGTGCAGGGTCTATACTATCTCGTTTGATCTAGGTTTATCCCTCCGATGGCTAACTGCACATGTTAATCGCACGTTGAGCGAAGTGACTGAAAAGTTGCCACCAGAGATTCCTGGAAGTGAAACCTTGAAAGTGATTCATGCTCAAGCTCAAAATATTCTCAAAGAAAATTTAGAATTTGAATCTTCCTTCCAACCGAGTTTCGAGTCTGAGCAACAAAGTGCGCCTGATATACCAGCATCCGATAGTGACTCTTCAAGTCTGCAAGAGCAAAGATTGGAAGGAAACAATGAAGTTTCTGAGGTTGTTCCATCAACAAATGGAGGAGATGATCGTCAAGAAAGCAGCAGCAGCTCGTATTTATCAACTACAGCGGTGTCTCCACCAAACTTGGAAAATAATATCAGATCACAGGAGTCGTCCAGGCCTGTGAGAGAAGGAGAAACGTCTGTCATTGAACAATTTGAACACGGTGTTTATATCACAGCCATAGTAATACCTGATGGCAGCAAAGTCTTCAAACGTGTTAGATTCAGGAGAAGATTCAGTGAGCAACAAGCAGAAGAATGGTGGAGCAATAACAAAGATAGGGTGTATAGAAGGTATAACCCACCACCTATAAATAATGAAAGTATTGGTTCATCTAGCACCCCACCTCATGGTGAAGAAAATGTTGAAGCAGCCTCAATCAACCAAGTCTACTTGATGAAATTATGGAAAAGTATAAAGTTTGTTATGGCTATCACTTTCCAAGCAAAGTGGAAGCAAGTGGCTGGTGCTATAAATATAAATGATCTCTATTCTCAAACTCATTCGGTTTCTTCTATGAATAGTAGTAGTAATATTAGTCATGCTCATGCACAAGGTGAAACAAGTAGAGAAATTGAAAAGGTACATGTTGATGACAACAACAATGATGTAGATACTTTAGAGGATGCATGGCAAGTAGTGGTTTCTAGGTCTCCAATGTTGCAAGTGGATCAAAAGGCTGAAGAATTTATCTATAAATTTCGTGAAGATATAAGGCTTCAGAAAGAGAAATCATTGCTTGAATTTCATGAGAGGCTAGCAAGAAGTACCTAA

Protein sequence

>MsG0180001775.01.T01

MRLLGRSNLVGYQPAAVDRTVILTCRVYTISFDLGLSLRWLTAHVNRTLSEVTEKLPPEIPGSETLKVIHAQAQNILKENLEFESSFQPSFESEQQSAPDIPASDSDSSSLQEQRLEGNNEVSEVVPSTNGGDDRQESSSSSYLSTTAVSPPNLENNIRSQESSRPVREGETSVIEQFEHGVYITAIVIPDGSKVFKRVRFRRRFSEQQAEEWWSNNKDRVYRRYNPPPINNESIGSSSTPPHGEENVEAASINQVYLMKLWKSIKFVMAITFQAKWKQVAGAININDLYSQTHSVSSMNSSSNISHAHAQGETSREIEKVHVDDNNNDVDTLEDAWQVVVSRSPMLQVDQKAEEFIYKFREDIRLQKEKSLLEFHERLARST*