AlfalfaGEDB | MsG0280011268.01

M. sativa cultivar ZhongmuNo.1 / MsG0280011268.01

KEGG: -
GO: -
PFAM: PF05553

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011268.01.T01	XP_003597684.1	91.713	181	4	1	1	170	15	195	2.21E-117	340
MsG0280011268.01.T02	XP_003597684.1	96.41	195	7	0	1	195	1	195	3.78E-139	396

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048887.01	MsG0280011268.01	-0.802111	6.549576e-49	3.181647e-46
MsG0080048889.01	MsG0280011268.01	0.807123	5.892983e-50	3.255418e-47
MsG0080048918.01	MsG0280011268.01	-0.813356	2.668251e-51	1.738631e-48
MsG0080049023.01	MsG0280011268.01	-0.806276	8.896980e-50	4.809312e-47
MsG0180000367.01	MsG0280011268.01	0.812429	4.259753e-51	2.707906e-48
MsG0180000466.01	MsG0280011268.01	0.839674	1.375635e-57	1.913414e-54
MsG0180001137.01	MsG0280011268.01	-0.807029	6.171906e-50	3.401309e-47
MsG0180002238.01	MsG0280011268.01	0.802284	6.034546e-49	2.944597e-46
MsG0180003405.01	MsG0280011268.01	-0.843935	1.031703e-58	1.639746e-55
MsG0180003484.01	MsG0280011268.01	0.814392	1.576759e-51	1.056752e-48
MsG0180003758.01	MsG0280011268.01	-0.807367	5.233030e-50	2.909275e-47
MsG0180004714.01	MsG0280011268.01	-0.808183	3.509247e-50	1.993210e-47
MsG0180004787.01	MsG0280011268.01	-0.834598	2.732444e-56	3.258234e-53
MsG0180004792.01	MsG0280011268.01	-0.806420	8.296344e-50	4.500958e-47
MsG0180005127.01	MsG0280011268.01	0.803886	2.814744e-49	1.430914e-46
MsG0180005898.01	MsG0280011268.01	-0.808070	3.709330e-50	2.100437e-47
MsG0180006183.01	MsG0280011268.01	0.808990	2.359957e-50	1.369085e-47
MsG0280006316.01	MsG0280011268.01	0.811187	7.935302e-51	4.879578e-48
MsG0280006381.01	MsG0280011268.01	-0.805848	1.094866e-49	5.854039e-47
MsG0280010854.01	MsG0280011268.01	-0.803839	2.878679e-49	1.461626e-46
MsG0280011268.01	MsG0280011269.01	0.868441	6.513568e-66	2.356038e-62
MsG0280011268.01	MsG0280011281.01	-0.815671	8.203759e-52	5.692528e-49
MsG0280011268.01	MsG0380012889.01	0.806724	7.158422e-50	3.913956e-47
MsG0280011268.01	MsG0380014639.01	-0.817451	3.275750e-52	2.386519e-49
MsG0280011268.01	MsG0380014642.01	-0.817764	2.783904e-52	2.045675e-49
MsG0280011268.01	MsG0380014735.01	-0.809541	1.798005e-50	1.058575e-47
MsG0280011268.01	MsG0380015828.01	-0.803376	3.590706e-49	1.801480e-46
MsG0280011268.01	MsG0380016456.01	-0.811591	6.486166e-51	4.031025e-48
MsG0280011268.01	MsG0380017666.01	0.813475	2.512616e-51	1.642531e-48
MsG0280011268.01	MsG0380017901.01	0.812168	4.856450e-51	3.065390e-48
MsG0280011268.01	MsG0480019171.01	0.840607	7.855324e-58	1.124733e-54
MsG0280011268.01	MsG0480021226.01	0.804032	2.624333e-49	1.339102e-46
MsG0280011268.01	MsG0480021967.01	-0.821869	3.209479e-53	2.643148e-50
MsG0280011268.01	MsG0480022242.01	-0.807425	5.085679e-50	2.831754e-47
MsG0280011268.01	MsG0480022244.01	-0.808500	3.004191e-50	1.720549e-47
MsG0280011268.01	MsG0480023067.01	0.849328	3.470475e-60	6.556520e-57
MsG0280011268.01	MsG0480023103.01	-0.817758	2.792737e-52	2.051806e-49
MsG0280011268.01	MsG0480023173.01	-0.815020	1.144883e-51	7.803755e-49
MsG0280011268.01	MsG0480023322.01	0.811605	6.440496e-51	4.004088e-48
MsG0280011268.01	MsG0480023466.01	-0.811848	5.702212e-51	3.568088e-48
MsG0280011268.01	MsG0480023851.01	-0.839740	1.322120e-57	1.842741e-54
MsG0280011268.01	MsG0580025105.01	-0.800839	1.193978e-48	5.616432e-46
MsG0280011268.01	MsG0580025486.01	-0.804052	2.599053e-49	1.326902e-46
MsG0280011268.01	MsG0580025633.01	0.816267	6.037760e-52	4.258512e-49
MsG0280011268.01	MsG0580027276.01	-0.814574	1.437235e-51	9.679517e-49
MsG0280011268.01	MsG0580028159.01	-0.801909	7.208402e-49	3.483816e-46
MsG0280011268.01	MsG0580028302.01	0.809470	1.862825e-50	1.094631e-47
MsG0280011268.01	MsG0580029158.01	0.804716	1.890046e-49	9.815644e-47
MsG0280011268.01	MsG0580029696.01	0.809461	1.871048e-50	1.099198e-47
MsG0280011268.01	MsG0580029751.01	-0.839361	1.659035e-57	2.285774e-54
MsG0280011268.01	MsG0680030296.01	0.837186	6.031712e-57	7.774271e-54
MsG0280011268.01	MsG0680031204.01	-0.806336	8.641564e-50	4.678220e-47
MsG0280011268.01	MsG0680031449.01	-0.803663	3.130781e-49	1.582360e-46
MsG0280011268.01	MsG0680032416.01	-0.809836	1.553844e-50	9.220075e-48
MsG0280011268.01	MsG0680035584.01	-0.805729	1.159604e-49	6.181503e-47
MsG0280011268.01	MsG0780038305.01	0.827992	1.151566e-54	1.129872e-51
MsG0280011268.01	MsG0780038307.01	0.817442	3.290705e-52	2.396809e-49
MsG0280011268.01	MsG0780038914.01	0.834141	3.558178e-56	4.184632e-53
MsG0280011268.01	MsG0780038919.01	0.824812	6.588660e-54	5.899645e-51
MsG0280011268.01	MsG0780039287.01	-0.810192	1.302517e-50	7.800328e-48
MsG0280011268.01	MsG0780039431.01	0.820765	5.769293e-53	4.606644e-50
MsG0280011268.01	MsG0780039619.01	0.817414	3.339157e-52	2.430224e-49
MsG0280011268.01	MsG0780040154.01	-0.806740	7.101877e-50	3.884730e-47
MsG0280011268.01	MsG0780040640.01	-0.815201	1.043698e-51	7.148761e-49
MsG0280011268.01	MsG0780040670.01	0.823690	1.209013e-53	1.048614e-50
MsG0280011268.01	MsG0780040716.01	0.841964	3.451120e-58	5.154925e-55
MsG0280011268.01	MsG0780040847.01	0.806288	8.848039e-50	4.784169e-47
MsG0280011268.01	MsG0780040892.01	-0.812221	4.727526e-51	2.988509e-48
MsG0280011268.01	MsG0780041403.01	0.810742	9.906024e-51	6.020097e-48
MsG0280011268.01	MsG0880042122.01	0.822332	2.506419e-53	2.091669e-50
MsG0280011268.01	MsG0880042641.01	0.804644	1.956685e-49	1.014241e-46
MsG0280011268.01	MsG0880043056.01	-0.839750	1.314726e-57	1.832947e-54
MsG0280011268.01	MsG0880043550.01	0.835485	1.632561e-56	1.999236e-53
MsG0280011268.01	MsG0880044317.01	-0.826265	2.982442e-54	2.783222e-51
MsG0280011268.01	MsG0880044318.01	-0.801361	9.336247e-49	4.450108e-46
MsG0280011268.01	MsG0880044548.01	-0.820012	8.587522e-53	6.715401e-50
MsG0280011268.01	MsG0880045703.01	-0.826027	3.397927e-54	3.149608e-51
MsG0280011268.01	MsG0880045968.01	-0.801869	7.345367e-49	3.546508e-46
MsG0280011268.01	MsG0880046010.01	-0.851040	1.149865e-60	2.297335e-57
MsG0280011268.01	MsG0880046080.01	0.806790	6.932393e-50	3.796803e-47
MsG0280011268.01	MsG0880047664.01	0.800509	1.394019e-48	6.502559e-46
MsG0280006575.01	MsG0280011268.01	0.801111	1.050511e-48	4.975756e-46
MsG0280006898.01	MsG0280011268.01	0.803013	4.269535e-49	2.122120e-46
MsG0280007163.01	MsG0280011268.01	0.813910	2.015223e-51	1.332922e-48
MsG0280007504.01	MsG0280011268.01	0.804919	1.714404e-49	8.950648e-47
MsG0280007505.01	MsG0280011268.01	0.806474	8.082828e-50	4.391253e-47
MsG0280007786.01	MsG0280011268.01	0.810799	9.632737e-51	5.862699e-48
MsG0280009526.01	MsG0280011268.01	0.825047	5.798802e-54	5.227468e-51

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011268.01.T01	MTR_2g101120	91.713	181	4	1	1	170	15	195	2.67e-121	340
MsG0280011268.01.T01	MTR_2g101130	83.243	185	15	2	1	169	15	199	1.16e-102	293
MsG0280011268.01.T01	MTR_8g014030	65.000	180	47	5	1	169	15	189	3.04e-77	228
MsG0280011268.01.T01	MTR_8g014010	58.989	178	55	5	1	167	15	185	1.48e-64	196
MsG0280011268.01.T01	MTR_8g014020	60.000	140	40	5	41	169	1	135	1.51e-50	159
MsG0280011268.01.T01	MTR_6g088545	41.954	174	83	6	2	169	19	180	7.32e-36	124
MsG0280011268.01.T01	MTR_6g088525	43.678	174	79	8	2	169	19	179	1.60e-35	122
MsG0280011268.01.T01	MTR_6g088565	39.655	174	87	6	2	169	19	180	3.68e-33	117
MsG0280011268.01.T01	MTR_6g088505	42.286	175	81	8	2	169	19	180	5.06e-33	116
MsG0280011268.01.T01	MTR_0016s0060	41.420	169	80	5	8	169	1	157	8.76e-32	112
MsG0280011268.01.T01	MTR_0016s0050	41.718	163	67	6	18	169	1	146	1.38e-28	103
MsG0280011268.01.T01	MTR_8g102660	37.234	188	70	10	1	169	17	175	2.39e-23	91.3
MsG0280011268.01.T01	MTR_7g084690	33.846	195	100	12	1	170	15	205	1.22e-15	71.6
MsG0280011268.01.T02	MTR_2g101120	96.410	195	7	0	1	195	1	195	4.58e-143	396
MsG0280011268.01.T02	MTR_2g101130	84.422	199	26	2	1	194	1	199	2.36e-113	321
MsG0280011268.01.T02	MTR_8g014030	68.367	196	53	5	1	194	1	189	2.97e-93	270
MsG0280011268.01.T02	MTR_8g014010	62.887	194	61	5	1	192	1	185	1.27e-80	238
MsG0280011268.01.T02	MTR_8g014020	64.789	142	41	5	55	194	1	135	3.69e-57	177
MsG0280011268.01.T02	MTR_6g088545	41.451	193	86	7	7	194	10	180	7.74e-40	134
MsG0280011268.01.T02	MTR_6g088525	43.005	193	82	9	7	194	10	179	3.86e-39	133
MsG0280011268.01.T02	MTR_6g088505	42.268	194	83	9	7	194	10	180	2.34e-37	128
MsG0280011268.01.T02	MTR_6g088565	38.342	193	92	6	7	194	10	180	2.10e-36	126
MsG0280011268.01.T02	MTR_8g102660	36.139	202	92	7	1	194	3	175	1.28e-31	113
MsG0280011268.01.T02	MTR_0016s0060	38.547	179	82	5	22	194	1	157	2.38e-29	107
MsG0280011268.01.T02	MTR_0016s0050	38.728	173	69	6	32	194	1	146	2.53e-26	99.4
MsG0280011268.01.T02	MTR_7g084690	34.272	213	114	13	1	195	1	205	3.70e-21	87.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011268.01.T01	AT1G52140	44.221	199	70	8	1	169	14	201	2.92e-42	140
MsG0280011268.01.T01	AT3G16330	44.845	194	71	8	1	169	14	196	1.91e-40	135
MsG0280011268.01.T01	AT4G29110	37.714	175	84	6	1	169	28	183	5.84e-25	95.9
MsG0280011268.01.T02	AT1G52140	46.479	213	83	9	1	194	1	201	2.98e-52	167
MsG0280011268.01.T02	AT3G16330	45.794	214	78	10	1	194	1	196	1.71e-45	149
MsG0280011268.01.T02	AT4G29110	39.286	196	91	6	1	194	14	183	7.30e-31	112

Find 66 sgRNAs with CRISPR-Local

Find 69 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCCAGCACTGCCGGGGTTT+GGG	0.239750	2:-81754575	MsG0280011268.01.T01:CDS
TGCGGTGACGTTTCCCTATT+GGG	0.266243	2:+81754721	None:intergenic
TCTCCAGCACTGCCGGGGTT+TGG	0.293342	2:-81754576	MsG0280011268.01.T01:CDS
CTGCGGTGACGTTTCCCTAT+TGG	0.315623	2:+81754720	None:intergenic
TGTGGTGATGGTGGAACATT+AGG	0.346556	2:+81754841	None:intergenic
CGCCCAAACCCCGGCAGTGC+TGG	0.348125	2:+81754573	None:intergenic
ATCAAGCTTGCTTCCTCAAC+TGG	0.348831	2:+81754433	None:intergenic
TTCTCATCATCTTCTCTTAG+AGG	0.359691	2:+81754507	None:intergenic
CCCTCAATTGCCTCACCATT+GGG	0.379653	2:+81754547	None:intergenic
ATCAAAGAGAGTGTGGAATA+TGG	0.384105	2:-81754976	MsG0280011268.01.T02:CDS
CTGCTGAAGAATTCATAAAC+AGG	0.405304	2:-81754464	MsG0280011268.01.T01:CDS
CCCAACCACTTCTTCCCAAT+AGG	0.431411	2:-81754735	MsG0280011268.01.T01:CDS
ACCCTCAATTGCCTCACCAT+TGG	0.445910	2:+81754546	None:intergenic
CCAACCACTTCTTCCCAATA+GGG	0.449763	2:-81754734	MsG0280011268.01.T01:CDS
ACTCCCTTGATGCGGTGAAT+TGG	0.458187	2:+81754781	None:intergenic
CCTATTGGGAAGAAGTGGTT+GGG	0.460023	2:+81754735	None:intergenic
AGGTGGAGCCGCCGTGGTTG+TGG	0.461991	2:+81754823	None:intergenic
AGCCGCCGTGGTTGTGGTGA+TGG	0.464409	2:+81754829	None:intergenic
GGCGTTTGAGCATCATGTTT+AGG	0.464704	2:+81754895	None:intergenic
GTCAAAGGGCAAACTAATGA+TGG	0.467955	2:-81754919	MsG0280011268.01.T01:CDS
GCCTTCTTCATGTTGAGAAA+AGG	0.468789	2:-81754945	MsG0280011268.01.T01:CDS
AGAAGCATCTCCAGCACTGC+CGG	0.469201	2:-81754583	MsG0280011268.01.T01:CDS
GTGTGAGCGGCGGCTTGAGG+TGG	0.473046	2:+81754806	None:intergenic
AGGTGGCGCTTGAGCGGAAG+TGG	0.487819	2:+81754683	None:intergenic
CCCTTGATGCGGTGAATTGG+TGG	0.491684	2:+81754784	None:intergenic
GCCCAATGGTGAGGCAATTG+AGG	0.492156	2:-81754548	MsG0280011268.01.T01:CDS
CACACTCTCTTTGATATCAC+TGG	0.497371	2:+81754984	None:intergenic
TCATCTTCTCTTAGAGGGAA+TGG	0.502641	2:+81754513	None:intergenic
GAAGCATCTCCAGCACTGCC+GGG	0.503234	2:-81754582	MsG0280011268.01.T01:CDS
CCCTATTGGGAAGAAGTGGT+TGG	0.503761	2:+81754734	None:intergenic
GGCGACAATGAGCGCAATGA+AGG	0.505967	2:-81754643	MsG0280011268.01.T01:CDS
GAGCGCAATGAAGGCAGTGT+TGG	0.509463	2:-81754634	MsG0280011268.01.T01:CDS
AAACGCCGCAGCAAGCTCGC+CGG	0.510889	2:-81754879	MsG0280011268.01.T01:CDS
CCCAATGGTGAGGCAATTGA+GGG	0.515343	2:-81754547	MsG0280011268.01.T01:CDS
GAAGGACGATCAAGTTGATA+AGG	0.519057	2:-81754487	MsG0280011268.01.T01:CDS
CGCTCAAGCGCCACCTACAC+AGG	0.523001	2:-81754676	MsG0280011268.01.T01:CDS
TCTCATCATCTTCTCTTAGA+GGG	0.530370	2:+81754508	None:intergenic
GGGGTTTGGGCGTAGCCCAA+TGG	0.530765	2:-81754562	MsG0280011268.01.T01:CDS
TTGAGAAAAGGCATGTCAAA+GGG	0.534014	2:-81754933	MsG0280011268.01.T01:CDS
CTGTGTAGGTGGCGCTTGAG+CGG	0.542519	2:+81754677	None:intergenic
ACCACCAATTCACCGCATCA+AGG	0.543219	2:-81754785	MsG0280011268.01.T01:intron
GTGGTGTGAGCGGCGGCTTG+AGG	0.555757	2:+81754803	None:intergenic
GTTGAGAAAAGGCATGTCAA+AGG	0.559027	2:-81754934	MsG0280011268.01.T01:CDS
ACCTCATCATCCTGTGTAGG+TGG	0.565659	2:+81754666	None:intergenic
GTGGAACATTAGGTTGGCAA+TGG	0.565737	2:+81754851	None:intergenic
GTTTCCCTATTGGGAAGAAG+TGG	0.569833	2:+81754730	None:intergenic
TGGAGAAGTTGTTGTGGCTG+CGG	0.571576	2:+81754703	None:intergenic
CGCCGTGGTTGTGGTGATGG+TGG	0.578705	2:+81754832	None:intergenic
TCAAAGGGCAAACTAATGAT+GGG	0.588410	2:-81754918	MsG0280011268.01.T01:CDS
CAGTGATATCAAAGAGAGTG+TGG	0.593721	2:-81754983	MsG0280011268.01.T02:CDS
TCTAAGAGAAGATGATGAGA+AGG	0.594411	2:-81754505	MsG0280011268.01.T01:CDS
ATTGGGCTACGCCCAAACCC+CGG	0.596167	2:+81754564	None:intergenic
CGGTGAATTGGTGGTGTGAG+CGG	0.608131	2:+81754793	None:intergenic
TGAATTGGTGGTGTGAGCGG+CGG	0.628937	2:+81754796	None:intergenic
AAGCATCTCCAGCACTGCCG+GGG	0.632731	2:-81754581	MsG0280011268.01.T01:CDS
ACCTACACAGGATGATGAGG+TGG	0.634579	2:-81754664	MsG0280011268.01.T01:CDS
CCACCAATTCACCGCATCAA+GGG	0.637439	2:-81754784	MsG0280011268.01.T01:intron
GGCTTGAGGTGGAGCCGCCG+TGG	0.640629	2:+81754817	None:intergenic
TTCCACCATCACCACAACCA+CGG	0.649090	2:-81754834	MsG0280011268.01.T01:intron
GCCACCTCATCATCCTGTGT+AGG	0.650227	2:+81754663	None:intergenic
CGGAAGTGGAGAAGTTGTTG+TGG	0.651141	2:+81754697	None:intergenic
TTGGGCGTAGCCCAATGGTG+AGG	0.651506	2:-81754557	MsG0280011268.01.T01:CDS
GTGATGGTGGAACATTAGGT+TGG	0.654305	2:+81754845	None:intergenic
GCCACCTACACAGGATGATG+AGG	0.661418	2:-81754667	MsG0280011268.01.T01:CDS
GAATTCATACTCCCTTGATG+CGG	0.696823	2:+81754773	None:intergenic
CACCATCACCACAACCACGG+CGG	0.721311	2:-81754831	MsG0280011268.01.T01:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	CTGCTGAAGAATTCATAAAC+AGG	-	Chr2:81754969-81754988	MsG0280011268.01.T02:CDS	35.0%
	TCAAAGGGCAAACTAATGAT+GGG	-	Chr2:81754515-81754534	MsG0280011268.01.T01:CDS	35.0%
	TCTAAGAGAAGATGATGAGA+AGG	-	Chr2:81754928-81754947	MsG0280011268.01.T01:CDS	35.0%
	TCTCATCATCTTCTCTTAGA+GGG	+	Chr2:81754928-81754947	None:intergenic	35.0%
	TTCTCATCATCTTCTCTTAG+AGG	+	Chr2:81754929-81754948	None:intergenic	35.0%
!	ATCAAAGAGAGTGTGGAATA+TGG	-	Chr2:81754457-81754476	MsG0280011268.01.T01:CDS	35.0%
!	TTGAGAAAAGGCATGTCAAA+GGG	-	Chr2:81754500-81754519	MsG0280011268.01.T01:CDS	35.0%
	CACACTCTCTTTGATATCAC+TGG	+	Chr2:81754452-81754471	None:intergenic	40.0%
	CAGTGATATCAAAGAGAGTG+TGG	-	Chr2:81754450-81754469	MsG0280011268.01.T01:CDS	40.0%
	GAATTCATACTCCCTTGATG+CGG	+	Chr2:81754663-81754682	None:intergenic	40.0%
	GCCTTCTTCATGTTGAGAAA+AGG	-	Chr2:81754488-81754507	MsG0280011268.01.T01:CDS	40.0%
	GTCAAAGGGCAAACTAATGA+TGG	-	Chr2:81754514-81754533	MsG0280011268.01.T01:CDS	40.0%
	TCATCTTCTCTTAGAGGGAA+TGG	+	Chr2:81754923-81754942	None:intergenic	40.0%
!	GCCTTTTCTCAACATGAAGA+AGG	+	Chr2:81754492-81754511	None:intergenic	40.0%
!	GTTGAGAAAAGGCATGTCAA+AGG	-	Chr2:81754499-81754518	MsG0280011268.01.T01:CDS	40.0%
!!	GAAGGACGATCAAGTTGATA+AGG	-	Chr2:81754946-81754965	MsG0280011268.01.T01:CDS	40.0%
	CCAACCACTTCTTCCCAATA+GGG	-	Chr2:81754699-81754718	MsG0280011268.01.T01:CDS	45.0%
	CCTATTGGGAAGAAGTGGTT+GGG	+	Chr2:81754701-81754720	None:intergenic	45.0%
	GGCGTTTGAGCATCATGTTT+AGG	+	Chr2:81754541-81754560	None:intergenic	45.0%
	GTTTCCCTATTGGGAAGAAG+TGG	+	Chr2:81754706-81754725	None:intergenic	45.0%
!	ACAGGTTTTACAGCCAGTTG+AGG	-	Chr2:81754987-81755006	MsG0280011268.01.T02:CDS	45.0%
!!	GTGATGGTGGAACATTAGGT+TGG	+	Chr2:81754591-81754610	None:intergenic	45.0%
!!	GTGGAACATTAGGTTGGCAA+TGG	+	Chr2:81754585-81754604	None:intergenic	45.0%
!!	TAGGTTGGCAATGGCTTTTC+CGG	+	Chr2:81754576-81754595	None:intergenic	45.0%
!!	TGTGGTGATGGTGGAACATT+AGG	+	Chr2:81754595-81754614	None:intergenic	45.0%
	ACCACCAATTCACCGCATCA+AGG	-	Chr2:81754648-81754667	MsG0280011268.01.T01:CDS	50.0%
	ACCCTCAATTGCCTCACCAT+TGG	+	Chr2:81754890-81754909	None:intergenic	50.0%
	ACCTACACAGGATGATGAGG+TGG	-	Chr2:81754769-81754788	MsG0280011268.01.T01:CDS	50.0%
	ACCTCATCATCCTGTGTAGG+TGG	+	Chr2:81754770-81754789	None:intergenic	50.0%
	ACTCCCTTGATGCGGTGAAT+TGG	+	Chr2:81754655-81754674	None:intergenic	50.0%
	CCACCAATTCACCGCATCAA+GGG	-	Chr2:81754649-81754668	MsG0280011268.01.T01:CDS	50.0%
	CCCAACCACTTCTTCCCAAT+AGG	-	Chr2:81754698-81754717	MsG0280011268.01.T01:CDS	50.0%
	CCCAATGGTGAGGCAATTGA+GGG	-	Chr2:81754886-81754905	MsG0280011268.01.T01:CDS	50.0%
	CCCTATTGGGAAGAAGTGGT+TGG	+	Chr2:81754702-81754721	None:intergenic	50.0%
	CCCTCAATTGCCTCACCATT+GGG	+	Chr2:81754889-81754908	None:intergenic	50.0%
	CGGAAGTGGAGAAGTTGTTG+TGG	+	Chr2:81754739-81754758	None:intergenic	50.0%
	TGCGGTGACGTTTCCCTATT+GGG	+	Chr2:81754715-81754734	None:intergenic	50.0%
	TGGAGAAGTTGTTGTGGCTG+CGG	+	Chr2:81754733-81754752	None:intergenic	50.0%
	TTCCACCATCACCACAACCA+CGG	-	Chr2:81754599-81754618	MsG0280011268.01.T01:CDS	50.0%
	CCCTTGATGCGGTGAATTGG+TGG	+	Chr2:81754652-81754671	None:intergenic	55.0%
	CTGCGGTGACGTTTCCCTAT+TGG	+	Chr2:81754716-81754735	None:intergenic	55.0%
	GAGCGCAATGAAGGCAGTGT+TGG	-	Chr2:81754799-81754818	MsG0280011268.01.T01:intron	55.0%
	GCCACCTACACAGGATGATG+AGG	-	Chr2:81754766-81754785	MsG0280011268.01.T01:CDS	55.0%
	GCCACCTCATCATCCTGTGT+AGG	+	Chr2:81754773-81754792	None:intergenic	55.0%
	GCCCAATGGTGAGGCAATTG+AGG	-	Chr2:81754885-81754904	MsG0280011268.01.T01:CDS	55.0%
	GGCGACAATGAGCGCAATGA+AGG	-	Chr2:81754790-81754809	MsG0280011268.01.T01:intron	55.0%
!!	AGAAGCATCTCCAGCACTGC+CGG	-	Chr2:81754850-81754869	MsG0280011268.01.T01:CDS	55.0%
!!	CGGTGAATTGGTGGTGTGAG+CGG	+	Chr2:81754643-81754662	None:intergenic	55.0%
!!	TGAATTGGTGGTGTGAGCGG+CGG	+	Chr2:81754640-81754659	None:intergenic	55.0%
	AAGCATCTCCAGCACTGCCG+GGG	-	Chr2:81754852-81754871	MsG0280011268.01.T01:CDS	60.0%
	ATTGGGCTACGCCCAAACCC+CGG	+	Chr2:81754872-81754891	None:intergenic	60.0%
	CACCATCACCACAACCACGG+CGG	-	Chr2:81754602-81754621	MsG0280011268.01.T01:CDS	60.0%
	CTGTGTAGGTGGCGCTTGAG+CGG	+	Chr2:81754759-81754778	None:intergenic	60.0%
	TTGGGCGTAGCCCAATGGTG+AGG	-	Chr2:81754876-81754895	MsG0280011268.01.T01:CDS	60.0%
!	GAAGCATCTCCAGCACTGCC+GGG	-	Chr2:81754851-81754870	MsG0280011268.01.T01:CDS	60.0%
!!!	CTTTTCCGGCGAGCTTGCTG+CGG	+	Chr2:81754562-81754581	None:intergenic	60.0%
	AAACGCCGCAGCAAGCTCGC+CGG	-	Chr2:81754554-81754573	MsG0280011268.01.T01:CDS	65.0%
	AGCCGCCGTGGTTGTGGTGA+TGG	+	Chr2:81754607-81754626	None:intergenic	65.0%
	AGGTGGCGCTTGAGCGGAAG+TGG	+	Chr2:81754753-81754772	None:intergenic	65.0%
	CGCTCAAGCGCCACCTACAC+AGG	-	Chr2:81754757-81754776	MsG0280011268.01.T01:CDS	65.0%
	CTCCAGCACTGCCGGGGTTT+GGG	-	Chr2:81754858-81754877	MsG0280011268.01.T01:CDS	65.0%
	GGGGTTTGGGCGTAGCCCAA+TGG	-	Chr2:81754871-81754890	MsG0280011268.01.T01:CDS	65.0%
	TCTCCAGCACTGCCGGGGTT+TGG	-	Chr2:81754857-81754876	MsG0280011268.01.T01:CDS	65.0%
!!	CGCCGTGGTTGTGGTGATGG+TGG	+	Chr2:81754604-81754623	None:intergenic	65.0%
	AGGTGGAGCCGCCGTGGTTG+TGG	+	Chr2:81754613-81754632	None:intergenic	70.0%
	GTGGTGTGAGCGGCGGCTTG+AGG	+	Chr2:81754633-81754652	None:intergenic	70.0%
	GTGTGAGCGGCGGCTTGAGG+TGG	+	Chr2:81754630-81754649	None:intergenic	70.0%
	CGCCCAAACCCCGGCAGTGC+TGG	+	Chr2:81754863-81754882	None:intergenic	75.0%
	GGCTTGAGGTGGAGCCGCCG+TGG	+	Chr2:81754619-81754638	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	81754434	81755021	81754434	ID=MsG0280011268.01;Name=MsG0280011268.01
Chr2	mRNA	81754434	81754979	81754434	ID=MsG0280011268.01.T01;Parent=MsG0280011268.01;Name=MsG0280011268.01.T01;_AED=0.48;_eAED=0.48;_QI=0\|0\|0\|1\|0\|0\|2\|0\|170
Chr2	exon	81754434	81754802	81754434	ID=MsG0280011268.01.T01:exon:2788;Parent=MsG0280011268.01.T01
Chr2	exon	81754836	81754979	81754836	ID=MsG0280011268.01.T01:exon:2787;Parent=MsG0280011268.01.T01
Chr2	CDS	81754836	81754979	81754836	ID=MsG0280011268.01.T01:cds;Parent=MsG0280011268.01.T01
Chr2	CDS	81754434	81754802	81754434	ID=MsG0280011268.01.T01:cds;Parent=MsG0280011268.01.T01
Chr2	mRNA	81754434	81755021	81754434	ID=MsG0280011268.01.T02;Parent=MsG0280011268.01;Name=MsG0280011268.01.T02;_AED=0.48;_eAED=0.48;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|195
Chr2	exon	81754434	81755021	81754434	ID=MsG0280011268.01.T02:exon:2789;Parent=MsG0280011268.01.T02
Chr2	CDS	81754434	81755021	81754434	ID=MsG0280011268.01.T02:cds;Parent=MsG0280011268.01.T02

Gene Sequence

>MsG0280011268.01.T01

ATGGTACGTGTAGCCTTCTTCATGTTGAGAAAAGGCATGTCAAAGGGCAAACTAATGATGGGCCTAAACATGATGCTCAAACGCCGCAGCAAGCTCGCCGGAAAAGCCATTGCCAACCTAATGTTCCACCATCACCACAACCACCAATTCACCGCATCAAGGGAGTATGAATTCAGCTGTAGCAACACTCCCAACCACTTCTTCCCAATAGGGAAACGTCACCGCAGCCACAACAACTTCTCCACTTCCGCTCAAGCGCCACCTACACAGGATGATGAGGTGGCGACAATGAGCGCAATGAAGGCAGTGTTGGAGATGCTTAACAATGATCAGTCGATTGTAGAAGCATCTCCAGCACTGCCGGGGTTTGGGCGTAGCCCAATGGTGAGGCAATTGAGGGTGACTGACTCACCATTCCCTCTAAGAGAAGATGATGAGAAGGACGATCAAGTTGATAAGGCTGCTGAAGAATTCATAAACAGGTTTTACAGCCAGTTGAGGAAGCAAGCTTGA

>MsG0280011268.01.T02

ATGGAAAGCAATCTACCAGTGATATCAAAGAGAGTGTGGAATATGGTACGTGTAGCCTTCTTCATGTTGAGAAAAGGCATGTCAAAGGGCAAACTAATGATGGGCCTAAACATGATGCTCAAACGCCGCAGCAAGCTCGCCGGAAAAGCCATTGCCAACCTAATGTTCCACCATCACCACAACCACGGCGGCTCCACCTCAAGCCGCCGCTCACACCACCAATTCACCGCATCAAGGGAGTATGAATTCAGCTGTAGCAACACTCCCAACCACTTCTTCCCAATAGGGAAACGTCACCGCAGCCACAACAACTTCTCCACTTCCGCTCAAGCGCCACCTACACAGGATGATGAGGTGGCGACAATGAGCGCAATGAAGGCAGTGTTGGAGATGCTTAACAATGATCAGTCGATTGTAGAAGCATCTCCAGCACTGCCGGGGTTTGGGCGTAGCCCAATGGTGAGGCAATTGAGGGTGACTGACTCACCATTCCCTCTAAGAGAAGATGATGAGAAGGACGATCAAGTTGATAAGGCTGCTGAAGAATTCATAAACAGGTTTTACAGCCAGTTGAGGAAGCAAGCTTGA

Protein sequence

>MsG0280011268.01.T01

MVRVAFFMLRKGMSKGKLMMGLNMMLKRRSKLAGKAIANLMFHHHHNHQFTASREYEFSCSNTPNHFFPIGKRHRSHNNFSTSAQAPPTQDDEVATMSAMKAVLEMLNNDQSIVEASPALPGFGRSPMVRQLRVTDSPFPLREDDEKDDQVDKAAEEFINRFYSQLRKQA*

>MsG0280011268.01.T02

MESNLPVISKRVWNMVRVAFFMLRKGMSKGKLMMGLNMMLKRRSKLAGKAIANLMFHHHHNHGGSTSSRRSHHQFTASREYEFSCSNTPNHFFPIGKRHRSHNNFSTSAQAPPTQDDEVATMSAMKAVLEMLNNDQSIVEASPALPGFGRSPMVRQLRVTDSPFPLREDDEKDDQVDKAAEEFINRFYSQLRKQA*