Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015157.01.T01 | XP_003600586.1 | 89.61 | 77 | 2 | 1 | 1 | 77 | 1 | 71 | 6.18E-39 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015157.01.T01 | G7J780 | 89.610 | 77 | 2 | 1 | 1 | 77 | 1 | 71 | 2.95e-39 | 133 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048137.01 | MsG0380015157.01 | 0.816713 | 4.798181e-52 | 3.425593e-49 |
| MsG0080049121.01 | MsG0380015157.01 | 0.803910 | 2.782432e-49 | 1.415383e-46 |
| MsG0180000806.01 | MsG0380015157.01 | 0.801264 | 9.773627e-49 | 4.647151e-46 |
| MsG0180000982.01 | MsG0380015157.01 | 0.824342 | 8.502547e-54 | 7.510017e-51 |
| MsG0180001599.01 | MsG0380015157.01 | 0.815868 | 7.414707e-52 | 5.172470e-49 |
| MsG0180001663.01 | MsG0380015157.01 | 0.809020 | 2.325197e-50 | 1.349991e-47 |
| MsG0180002489.01 | MsG0380015157.01 | 0.849076 | 4.077785e-60 | 7.640929e-57 |
| MsG0180002491.01 | MsG0380015157.01 | 0.834177 | 3.484113e-56 | 4.101955e-53 |
| MsG0180003744.01 | MsG0380015157.01 | 0.805970 | 1.032357e-49 | 5.536987e-47 |
| MsG0180004050.01 | MsG0380015157.01 | 0.804466 | 2.131632e-49 | 1.099834e-46 |
| MsG0180004599.01 | MsG0380015157.01 | 0.800578 | 1.349841e-48 | 6.307493e-46 |
| MsG0180004996.01 | MsG0380015157.01 | 0.814768 | 1.301810e-51 | 8.812636e-49 |
| MsG0180005398.01 | MsG0380015157.01 | 0.822357 | 2.473190e-53 | 2.065399e-50 |
| MsG0180005990.01 | MsG0380015157.01 | 0.824553 | 7.583177e-54 | 6.739606e-51 |
| MsG0180006016.01 | MsG0380015157.01 | 0.811649 | 6.300491e-51 | 3.921544e-48 |
| MsG0280006411.01 | MsG0380015157.01 | 0.820101 | 8.193245e-53 | 6.423504e-50 |
| MsG0280010595.01 | MsG0380015157.01 | 0.830972 | 2.172989e-55 | 2.325706e-52 |
| MsG0280010702.01 | MsG0380015157.01 | 0.818308 | 2.098030e-52 | 1.564809e-49 |
| MsG0280011307.01 | MsG0380015157.01 | 0.800544 | 1.371536e-48 | 6.403331e-46 |
| MsG0380011537.01 | MsG0380015157.01 | 0.833685 | 4.627290e-56 | 5.368186e-53 |
| MsG0380014248.01 | MsG0380015157.01 | 0.802039 | 6.779003e-49 | 3.287043e-46 |
| MsG0380014561.01 | MsG0380015157.01 | 0.845757 | 3.327166e-59 | 5.602809e-56 |
| MsG0380015146.01 | MsG0380015157.01 | 0.812475 | 4.161549e-51 | 2.648710e-48 |
| MsG0380015157.01 | MsG0380015564.01 | 0.800986 | 1.114247e-48 | 5.261296e-46 |
| MsG0380015157.01 | MsG0380016133.01 | 0.834136 | 3.568689e-56 | 4.196427e-53 |
| MsG0380015157.01 | MsG0380016498.01 | 0.801595 | 8.359760e-49 | 4.008002e-46 |
| MsG0380015157.01 | MsG0380017039.01 | 0.802273 | 6.066979e-49 | 2.959460e-46 |
| MsG0380015157.01 | MsG0480018847.01 | 0.814530 | 1.470422e-51 | 9.891051e-49 |
| MsG0380015157.01 | MsG0480019434.01 | 0.808001 | 3.837452e-50 | 2.169097e-47 |
| MsG0380015157.01 | MsG0480020416.01 | 0.815224 | 1.031288e-51 | 7.068240e-49 |
| MsG0380015157.01 | MsG0480020791.01 | 0.807917 | 3.999422e-50 | 2.255481e-47 |
| MsG0380015157.01 | MsG0480021041.01 | 0.806563 | 7.742090e-50 | 4.215627e-47 |
| MsG0380015157.01 | MsG0480021240.01 | 0.810034 | 1.408717e-50 | 8.402587e-48 |
| MsG0380015157.01 | MsG0480021448.01 | 0.811251 | 7.688160e-51 | 4.735541e-48 |
| MsG0380015157.01 | MsG0480021695.01 | 0.830791 | 2.407211e-55 | 2.562660e-52 |
| MsG0380015157.01 | MsG0480022104.01 | 0.815362 | 9.613091e-52 | 6.613850e-49 |
| MsG0380015157.01 | MsG0480022108.01 | 0.801284 | 9.681239e-49 | 4.605581e-46 |
| MsG0380015157.01 | MsG0480022183.01 | 0.800525 | 1.383751e-48 | 6.457231e-46 |
| MsG0380015157.01 | MsG0480022207.01 | 0.802844 | 4.626856e-49 | 2.290152e-46 |
| MsG0380015157.01 | MsG0480022223.01 | 0.803837 | 2.880701e-49 | 1.462608e-46 |
| MsG0380015157.01 | MsG0480023088.01 | 0.807017 | 6.205542e-50 | 3.418785e-47 |
| MsG0380015157.01 | MsG0480023994.01 | 0.804836 | 1.784157e-49 | 9.294748e-47 |
| MsG0380015157.01 | MsG0580025134.01 | 0.813195 | 2.893810e-51 | 1.877262e-48 |
| MsG0380015157.01 | MsG0580025756.01 | 0.830349 | 3.088427e-55 | 3.245564e-52 |
| MsG0380015157.01 | MsG0580026047.01 | 0.809753 | 1.619079e-50 | 9.586477e-48 |
| MsG0380015157.01 | MsG0580028185.01 | 0.802949 | 4.400173e-49 | 2.183621e-46 |
| MsG0380015157.01 | MsG0580028284.01 | 0.829010 | 6.537680e-55 | 6.607028e-52 |
| MsG0380015157.01 | MsG0580028289.01 | 0.842601 | 2.340323e-58 | 3.566637e-55 |
| MsG0380015157.01 | MsG0580029594.01 | 0.801397 | 9.181768e-49 | 4.380176e-46 |
| MsG0380015157.01 | MsG0580029658.01 | 0.813481 | 2.504165e-51 | 1.637314e-48 |
| MsG0380015157.01 | MsG0580029661.01 | 0.806009 | 1.013020e-49 | 5.438773e-47 |
| MsG0380015157.01 | MsG0680030415.01 | 0.819000 | 1.460920e-52 | 1.110791e-49 |
| MsG0380015157.01 | MsG0680031538.01 | 0.808422 | 3.121811e-50 | 1.784267e-47 |
| MsG0380015157.01 | MsG0780037082.01 | 0.806529 | 7.872004e-50 | 4.282549e-47 |
| MsG0380015157.01 | MsG0780038911.01 | 0.867810 | 1.039964e-65 | 3.678517e-62 |
| MsG0380015157.01 | MsG0780039143.01 | 0.808661 | 2.775269e-50 | 1.596027e-47 |
| MsG0380015157.01 | MsG0780041392.01 | 0.801799 | 7.591523e-49 | 3.658742e-46 |
| MsG0380015157.01 | MsG0780041490.01 | 0.808002 | 3.835084e-50 | 2.167840e-47 |
| MsG0380015157.01 | MsG0780041796.01 | 0.805476 | 1.310725e-49 | 6.941142e-47 |
| MsG0380015157.01 | MsG0880042055.01 | 0.807363 | 5.243233e-50 | 2.914652e-47 |
| MsG0380015157.01 | MsG0880043082.01 | 0.825686 | 4.094627e-54 | 3.758806e-51 |
| MsG0380015157.01 | MsG0880043465.01 | 0.802003 | 6.893068e-49 | 3.339336e-46 |
| MsG0380015157.01 | MsG0880045951.01 | 0.814370 | 1.594526e-51 | 1.067968e-48 |
| MsG0380015157.01 | MsG0880046047.01 | 0.816229 | 6.157038e-52 | 4.337991e-49 |
| MsG0380015157.01 | MsG0880046058.01 | 0.823569 | 1.290406e-53 | 1.115201e-50 |
| MsG0380015157.01 | MsG0880046377.01 | 0.803192 | 3.919921e-49 | 1.957473e-46 |
| MsG0380015157.01 | MsG0880047391.01 | 0.805732 | 1.157926e-49 | 6.173048e-47 |
| MsG0380015157.01 | MsG0880047594.01 | 0.810363 | 1.196608e-50 | 7.198623e-48 |
| MsG0280006593.01 | MsG0380015157.01 | 0.802710 | 4.930491e-49 | 2.432059e-46 |
| MsG0280006595.01 | MsG0380015157.01 | 0.806190 | 9.277846e-50 | 5.004189e-47 |
| MsG0280007161.01 | MsG0380015157.01 | 0.807861 | 4.109346e-50 | 2.314125e-47 |
| MsG0280007311.01 | MsG0380015157.01 | 0.833631 | 4.772069e-56 | 5.527253e-53 |
| MsG0280008417.01 | MsG0380015157.01 | 0.808749 | 2.657517e-50 | 1.531869e-47 |
| MsG0280010416.01 | MsG0380015157.01 | 0.839359 | 1.661161e-57 | 2.288582e-54 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015157.01.T01 | MTR_3g063970 | 89.610 | 77 | 2 | 1 | 1 | 77 | 1 | 71 | 7.49e-43 | 133 |
| MsG0380015157.01.T01 | MTR_3g063970 | 95.833 | 48 | 2 | 0 | 1 | 48 | 1 | 48 | 3.21e-15 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015157.01.T01 | AT3G14430 | 60.870 | 69 | 20 | 2 | 9 | 77 | 15 | 76 | 2.14e-22 | 82.0 |
Find 27 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACATCAATTCCTTTAAA+AGG | 0.150864 | 3:-65964510 | None:intergenic |
| ATTTCTTACGAAGGCGAAAA+TGG | 0.322719 | 3:-65963490 | None:intergenic |
| GTTAATGTTACATTCTAGTT+AGG | 0.334854 | 3:+65964706 | MsG0380015157.01.T01:three_prime_UTR |
| ACAAATACTTGATTGTATTC+AGG | 0.336136 | 3:-65964455 | None:intergenic |
| GTATCTTTATGTAAGTTTGT+AGG | 0.358607 | 3:+65964649 | MsG0380015157.01.T01:three_prime_UTR |
| CTGGTGGTGGACCAGAGCTT+TGG | 0.389186 | 3:+65964486 | MsG0380015157.01.T01:CDS |
| CTTTAAAAGGGCCAAAGCTC+TGG | 0.402112 | 3:-65964497 | None:intergenic |
| AAACATCAATTCCTTTAAAA+GGG | 0.443719 | 3:-65964509 | None:intergenic |
| AAAGGAATTGATGTTTGGAC+AGG | 0.475928 | 3:+65964516 | MsG0380015157.01.T01:exon |
| CAAAGCTCTGGTCCACCACC+AGG | 0.488950 | 3:-65964485 | None:intergenic |
| CAAGTATTTGTGAAGAAGCC+TGG | 0.508253 | 3:+65964467 | MsG0380015157.01.T01:CDS |
| GACAGGTTGGACGTCATCCA+TGG | 0.522357 | 3:+65964533 | MsG0380015157.01.T01:three_prime_UTR |
| CATAAAGATACAAATACAAA+CGG | 0.528427 | 3:-65964637 | None:intergenic |
| GAATTGATGTTTGGACAGGT+TGG | 0.543485 | 3:+65964520 | MsG0380015157.01.T01:three_prime_UTR |
| CTAGACGGCGAGTCGAGACT+CGG | 0.545765 | 3:+65963436 | MsG0380015157.01.T01:CDS |
| TGAAGAAGAAAAGAAAGAAG+AGG | 0.565354 | 3:-65963527 | None:intergenic |
| GAAATATGTAATATCATCAC+AGG | 0.573101 | 3:-65964615 | None:intergenic |
| AGAGAACAGCGATGGCTAGA+CGG | 0.584999 | 3:+65963421 | None:intergenic |
| AAAATATGTGAAATCATCAC+AGG | 0.600529 | 3:-65964574 | None:intergenic |
| TTTGTGAAGAAGCCTGGTGG+TGG | 0.604245 | 3:+65964473 | MsG0380015157.01.T01:CDS |
| ATTAACATCATTCAAATCTG+TGG | 0.614330 | 3:-65964689 | None:intergenic |
| GGGACGAGTCGTTATTGACT+CGG | 0.618106 | 3:+65963457 | MsG0380015157.01.T01:CDS |
| TAGACGGCGAGTCGAGACTC+GGG | 0.629156 | 3:+65963437 | MsG0380015157.01.T01:CDS |
| AAACTCAGCATTTCTTACGA+AGG | 0.638252 | 3:-65963499 | None:intergenic |
| GCATGCTTAGAATACCTCCA+TGG | 0.699909 | 3:-65964550 | None:intergenic |
| AGGTTGGACGTCATCCATGG+AGG | 0.746774 | 3:+65964536 | MsG0380015157.01.T01:three_prime_UTR |
| GTATTTGTGAAGAAGCCTGG+TGG | 0.787083 | 3:+65964470 | MsG0380015157.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAAAAAGAAAAAAC+AGG | - | Chr3:65963594-65963613 | None:intergenic | 10.0% |
| !! | AATAATAAAAAGAAAAAACA+GGG | - | Chr3:65963593-65963612 | None:intergenic | 10.0% |
| !!! | TTTTCATGTTTTGTTAAATT+AGG | + | Chr3:65963679-65963698 | MsG0380015157.01.T01:intron | 15.0% |
| !! | ACATAATTCAAAGTAATCAT+AGG | + | Chr3:65964189-65964208 | MsG0380015157.01.T01:intron | 20.0% |
| !! | ATAATTCATTCATATATGGT+TGG | + | Chr3:65964288-65964307 | MsG0380015157.01.T01:intron | 20.0% |
| !! | CATAAAGATACAAATACAAA+CGG | - | Chr3:65964640-65964659 | None:intergenic | 20.0% |
| !! | CTTCATAATTCATTCATATA+TGG | + | Chr3:65964284-65964303 | MsG0380015157.01.T01:intron | 20.0% |
| !!! | AAACATCAATTCCTTTAAAA+GGG | - | Chr3:65964512-65964531 | None:intergenic | 20.0% |
| !!! | ATATTCACAAGTTTTTATGT+CGG | + | Chr3:65964002-65964021 | MsG0380015157.01.T01:intron | 20.0% |
| !!! | TTTTGATAACTGGAAATTTT+TGG | + | Chr3:65964311-65964330 | MsG0380015157.01.T01:intron | 20.0% |
| ! | AAAATATGTGAAATCATCAC+AGG | - | Chr3:65964577-65964596 | None:intergenic | 25.0% |
| ! | AAGAACGAAAATTTGAACAA+AGG | - | Chr3:65963635-65963654 | None:intergenic | 25.0% |
| ! | AATAAAAAGAAAAAACAGGG+AGG | - | Chr3:65963590-65963609 | None:intergenic | 25.0% |
| ! | AATATGTTTGAAAGAACTGA+TGG | - | Chr3:65963987-65964006 | None:intergenic | 25.0% |
| ! | ACAAATACTTGATTGTATTC+AGG | - | Chr3:65964458-65964477 | None:intergenic | 25.0% |
| ! | ATTAACATCATTCAAATCTG+TGG | - | Chr3:65964692-65964711 | None:intergenic | 25.0% |
| ! | ATTTGAACAAAGGATGTAAA+TGG | - | Chr3:65963625-65963644 | None:intergenic | 25.0% |
| ! | CAAACATCAATTCCTTTAAA+AGG | - | Chr3:65964513-65964532 | None:intergenic | 25.0% |
| ! | GAAATATGTAATATCATCAC+AGG | - | Chr3:65964618-65964637 | None:intergenic | 25.0% |
| ! | GTATCTTTATGTAAGTTTGT+AGG | + | Chr3:65964649-65964668 | MsG0380015157.01.T01:three_prime_UTR | 25.0% |
| ! | TATGAATGAATTATGAAGCA+CGG | - | Chr3:65964282-65964301 | None:intergenic | 25.0% |
| ! | TTTGAACAAAGGATGTAAAT+GGG | - | Chr3:65963624-65963643 | None:intergenic | 25.0% |
| !! | GTTAATGTTACATTCTAGTT+AGG | + | Chr3:65964706-65964725 | MsG0380015157.01.T01:three_prime_UTR | 25.0% |
| !! | TTGTGTTGTAATTTTGCTTT+TGG | + | Chr3:65964387-65964406 | MsG0380015157.01.T01:intron | 25.0% |
| !!! | AATTTTCGTTCTTTTTCATG+TGG | + | Chr3:65963642-65963661 | MsG0380015157.01.T01:intron | 25.0% |
| !!! | ATTTTCGTTCTTTTTCATGT+GGG | + | Chr3:65963643-65963662 | MsG0380015157.01.T01:intron | 25.0% |
| !!! | CTTTTAAAGGAATTGATGTT+TGG | + | Chr3:65964511-65964530 | MsG0380015157.01.T01:exon | 25.0% |
| AACTATATACCAATTCCATC+TGG | - | Chr3:65963806-65963825 | None:intergenic | 30.0% | |
| CAAAATTACAACACAAACAG+AGG | - | Chr3:65964383-65964402 | None:intergenic | 30.0% | |
| GGTTGGATAGTTATATCAAA+AGG | + | Chr3:65963766-65963785 | MsG0380015157.01.T01:intron | 30.0% | |
| TAAATTGAAAACTGCATCAC+TGG | + | Chr3:65963733-65963752 | MsG0380015157.01.T01:intron | 30.0% | |
| TGAAGAAGAAAAGAAAGAAG+AGG | - | Chr3:65963530-65963549 | None:intergenic | 30.0% | |
| !!! | ATATGGTTGGTTTTGATAAC+TGG | + | Chr3:65964301-65964320 | MsG0380015157.01.T01:intron | 30.0% |
| AAACTCAGCATTTCTTACGA+AGG | - | Chr3:65963502-65963521 | None:intergenic | 35.0% | |
| AAAGGAATTGATGTTTGGAC+AGG | + | Chr3:65964516-65964535 | MsG0380015157.01.T01:exon | 35.0% | |
| AATTACAACACAAACAGAGG+AGG | - | Chr3:65964380-65964399 | None:intergenic | 35.0% | |
| ACAATCAGCATGTTTCCTTT+CGG | + | Chr3:65964076-65964095 | MsG0380015157.01.T01:intron | 35.0% | |
| ATTACAACACAAACAGAGGA+GGG | - | Chr3:65964379-65964398 | None:intergenic | 35.0% | |
| ATTCTGATTCCAGATGGAAT+TGG | + | Chr3:65963794-65963813 | MsG0380015157.01.T01:intron | 35.0% | |
| ATTTCTTACGAAGGCGAAAA+TGG | - | Chr3:65963493-65963512 | None:intergenic | 35.0% | |
| TTCATTCATGATACACCGAA+AGG | - | Chr3:65964094-65964113 | None:intergenic | 35.0% | |
| ACACCAATGTATGTTGACAC+TGG | + | Chr3:65964233-65964252 | MsG0380015157.01.T01:intron | 40.0% | |
| CAAGTATTTGTGAAGAAGCC+TGG | + | Chr3:65964467-65964486 | MsG0380015157.01.T01:CDS | 40.0% | |
| CACCAATGTATGTTGACACT+GGG | + | Chr3:65964234-65964253 | MsG0380015157.01.T01:intron | 40.0% | |
| GAATTGATGTTTGGACAGGT+TGG | + | Chr3:65964520-65964539 | MsG0380015157.01.T01:three_prime_UTR | 40.0% | |
| GATAAGCGCTTTAATTGAGC+TGG | - | Chr3:65963836-65963855 | None:intergenic | 40.0% | |
| GTAGAGATTCTGATTCCAGA+TGG | + | Chr3:65963788-65963807 | MsG0380015157.01.T01:intron | 40.0% | |
| TCATGAATGAAGCACATACG+CGG | + | Chr3:65964103-65964122 | MsG0380015157.01.T01:intron | 40.0% | |
| !! | TCACTGGTTTGATGATTGGT+TGG | + | Chr3:65963749-65963768 | MsG0380015157.01.T01:intron | 40.0% |
| !! | TGCATCACTGGTTTGATGAT+TGG | + | Chr3:65963745-65963764 | MsG0380015157.01.T01:intron | 40.0% |
| GCACGGAAACTTCTCAGATT+CGG | - | Chr3:65964265-65964284 | None:intergenic | 45.0% | |
| GCATGCTTAGAATACCTCCA+TGG | - | Chr3:65964553-65964572 | None:intergenic | 45.0% | |
| GTATTTGTGAAGAAGCCTGG+TGG | + | Chr3:65964470-65964489 | MsG0380015157.01.T01:CDS | 45.0% | |
| GTCCCAGTGTCAACATACAT+TGG | - | Chr3:65964239-65964258 | None:intergenic | 45.0% | |
| ! | CTTTAAAAGGGCCAAAGCTC+TGG | - | Chr3:65964500-65964519 | None:intergenic | 45.0% |
| !! | CAGAGCTTTGGCCCTTTTAA+AGG | + | Chr3:65964498-65964517 | MsG0380015157.01.T01:CDS | 45.0% |
| !!! | TTATTTTATCAAATTATTAT+TGG | - | Chr3:65964170-65964189 | None:intergenic | 5.0% |
| ACAAACAGAGGAGGGAGTAG+GGG | - | Chr3:65964371-65964390 | None:intergenic | 50.0% | |
| ACACAAACAGAGGAGGGAGT+AGG | - | Chr3:65964373-65964392 | None:intergenic | 50.0% | |
| ATGAAGCACATACGCGGATG+CGG | + | Chr3:65964109-65964128 | MsG0380015157.01.T01:intron | 50.0% | |
| CACAAACAGAGGAGGGAGTA+GGG | - | Chr3:65964372-65964391 | None:intergenic | 50.0% | |
| CATAGGTGTCAGTGTCGTGT+TGG | + | Chr3:65964206-65964225 | MsG0380015157.01.T01:intron | 50.0% | |
| TTTGTGAAGAAGCCTGGTGG+TGG | + | Chr3:65964473-65964492 | MsG0380015157.01.T01:CDS | 50.0% | |
| ! | GGGACGAGTCGTTATTGACT+CGG | + | Chr3:65963457-65963476 | MsG0380015157.01.T01:CDS | 50.0% |
| AGGTGTCAGTGTCGTGTTGG+TGG | + | Chr3:65964209-65964228 | MsG0380015157.01.T01:intron | 55.0% | |
| AGGTTGGACGTCATCCATGG+AGG | + | Chr3:65964536-65964555 | MsG0380015157.01.T01:three_prime_UTR | 55.0% | |
| CATCAGACACGACACGGACA+TGG | + | Chr3:65964133-65964152 | MsG0380015157.01.T01:intron | 55.0% | |
| TGCGGACATCAGACACGACA+CGG | + | Chr3:65964127-65964146 | MsG0380015157.01.T01:intron | 55.0% | |
| ! | GACAGGTTGGACGTCATCCA+TGG | + | Chr3:65964533-65964552 | MsG0380015157.01.T01:three_prime_UTR | 55.0% |
| ! | GGTGTCAGTGTCGTGTTGGT+GGG | + | Chr3:65964210-65964229 | MsG0380015157.01.T01:intron | 55.0% |
| ACAGAGGAGGGAGTAGGGGA+TGG | - | Chr3:65964367-65964386 | None:intergenic | 60.0% | |
| CGACACGGACATGGACACTC+TGG | + | Chr3:65964142-65964161 | MsG0380015157.01.T01:intron | 60.0% | |
| CTAGACGGCGAGTCGAGACT+CGG | + | Chr3:65963436-65963455 | MsG0380015157.01.T01:CDS | 60.0% | |
| TAGACGGCGAGTCGAGACTC+GGG | + | Chr3:65963437-65963456 | MsG0380015157.01.T01:CDS | 60.0% | |
| ! | CAAAGCTCTGGTCCACCACC+AGG | - | Chr3:65964488-65964507 | None:intergenic | 60.0% |
| !! | CTGGTGGTGGACCAGAGCTT+TGG | + | Chr3:65964486-65964505 | MsG0380015157.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 65963432 | 65964786 | 65963432 | ID=MsG0380015157.01;Name=MsG0380015157.01 |
| Chr3 | mRNA | 65963432 | 65964786 | 65963432 | ID=MsG0380015157.01.T01;Parent=MsG0380015157.01;Name=MsG0380015157.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0|0.5|1|0|0|2|269|77 |
| Chr3 | exon | 65963432 | 65963593 | 65963432 | ID=MsG0380015157.01.T01:exon:22855;Parent=MsG0380015157.01.T01 |
| Chr3 | exon | 65964446 | 65964786 | 65964446 | ID=MsG0380015157.01.T01:exon:22856;Parent=MsG0380015157.01.T01 |
| Chr3 | CDS | 65963432 | 65963593 | 65963432 | ID=MsG0380015157.01.T01:cds;Parent=MsG0380015157.01.T01 |
| Chr3 | CDS | 65964446 | 65964517 | 65964446 | ID=MsG0380015157.01.T01:cds;Parent=MsG0380015157.01.T01 |
| Chr3 | three_prime_UTR | 65964518 | 65964786 | 65964518 | ID=MsG0380015157.01.T01:three_prime_utr;Parent=MsG0380015157.01.T01 |
| Gene Sequence |
| Protein sequence |
