AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021041.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021041.01.T01 MTR_4g064917 62.722 169 37 3 58 203 96 261 3.42e-60 189
MsG0480021041.01.T01 MTR_3g079890 39.869 153 68 4 71 200 70 221 2.95e-29 108
MsG0480021041.01.T01 MTR_1g031110 39.869 153 68 4 71 200 66 217 4.04e-29 108
MsG0480021041.01.T01 MTR_4g064903 100.000 35 0 0 37 71 38 72 9.08e-20 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021041.01.T01 AT3G46870 48.503 167 60 3 58 201 92 255 5.64e-44 147
MsG0480021041.01.T01 AT3G46870 45.556 180 58 4 58 201 92 267 6.15e-41 140
MsG0480021041.01.T01 AT1G62350 37.086 151 73 3 71 199 31 181 6.27e-24 94.4
MsG0480021041.01.T01 AT1G62350 37.086 151 73 3 71 199 87 237 1.72e-23 94.4
MsG0480021041.01.T01 AT1G62350 55.224 67 30 0 133 199 62 128 9.80e-20 82.0
MsG0480021041.01.T01 AT5G59140 66.667 36 12 0 37 72 36 71 1.03e-11 59.3

Find 38 sgRNAs with CRISPR-Local

Find 347 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGGTGATTATTATAATTA+TGG 0.193347 4:+52565144 MsG0480021041.01.T01:CDS
AATGGATTTGCAGGTGTTTC+AGG 0.194785 4:+52565195 MsG0480021041.01.T01:CDS
CGGGAGCGAGCAATTCTAAA+TGG 0.233305 4:+52559995 None:intergenic
GATCCACCACAGGAGATATT+TGG 0.271034 4:+52565564 MsG0480021041.01.T01:CDS
TGCCTTATGAGTGACTTAAA+TGG 0.325660 4:+52565177 MsG0480021041.01.T01:CDS
GGCAACTCCTCTGGTGGATC+TGG 0.363516 4:-52565444 MsG0480021042.01.T01:intron
TAACTTACGCAAGGGCAATA+TGG 0.377263 4:-52560077 MsG0480021042.01.T01:intron
TTCACTTTGTTTCTCAAAAG+AGG 0.379736 4:-52565501 MsG0480021042.01.T01:intron
CTGTGGTGGATCATAAATAC+TGG 0.390476 4:-52565553 MsG0480021042.01.T01:intron
AGTGACTTAAATGGATTTGC+AGG 0.421171 4:+52565186 MsG0480021041.01.T01:CDS
TGGATCATAAATACTGGAAT+CGG 0.436321 4:-52565547 MsG0480021042.01.T01:intron
GGGCAATATGGACATTTACT+TGG 0.446574 4:-52560065 MsG0480021042.01.T01:intron
TGGGAACGGACAAAACCGTT+TGG 0.447077 4:-52560045 MsG0480021042.01.T01:intron
ATTCTGAACGGCAACTCCTC+TGG 0.448624 4:-52565453 MsG0480021042.01.T01:intron
ACAAATCTTCTCAAGAATAG+TGG 0.454935 4:-52561314 MsG0480021042.01.T01:intron
GGGAACGGACAAAACCGTTT+GGG 0.460884 4:-52560044 MsG0480021042.01.T01:intron
ATCCATTTAAGTCACTCATA+AGG 0.481294 4:-52565179 MsG0480021042.01.T01:intron
AGAATAGTGGAACTAATCTC+AGG 0.494240 4:-52561301 MsG0480021042.01.T01:intron
AATTATGCTCTTTACCCAAA+CGG 0.495553 4:+52560030 MsG0480021041.01.T01:CDS
TTGTTTCTCAAAAGAGGATG+TGG 0.498411 4:-52565495 MsG0480021042.01.T01:intron
GGATCATAAATACTGGAATC+GGG 0.505211 4:-52565546 MsG0480021042.01.T01:intron
AGAAGTTTCTCTCGCTCTCA+AGG 0.514976 4:+52564380 MsG0480021041.01.T01:CDS
TATACGTTCATCGCATCTGC+AGG 0.520946 4:-52565402 MsG0480021042.01.T01:intron
ATTGGCATCTTGAATTTGCT+AGG 0.521974 4:+52561347 MsG0480021041.01.T01:CDS
GGGAGCGAGCAATTCTAAAT+GGG 0.525951 4:+52559996 None:intergenic
GGCAATATGGACATTTACTT+GGG 0.537866 4:-52560064 MsG0480021042.01.T01:intron
CATAAGGGCTTCTTGAGTAG+TGG 0.543851 4:+52565375 MsG0480021041.01.T01:intron
AGGTGATGCAAAAGCAGGAC+TGG 0.555001 4:+52565215 MsG0480021041.01.T01:CDS
GTTTCAGGTGATGCAAAAGC+AGG 0.562129 4:+52565210 MsG0480021041.01.T01:CDS
GCGCCAAATATCTCCTGTGG+TGG 0.566876 4:-52565567 MsG0480021042.01.T01:intron
GAGATATTTGGCGCACGCTG+AGG 0.580393 4:+52565576 MsG0480021041.01.T01:CDS
TATGGACATTTACTTGGGAA+CGG 0.581675 4:-52560059 MsG0480021042.01.T01:intron
AGATGCGATGAACGTATATG+AGG 0.589996 4:+52565407 MsG0480021041.01.T01:CDS
CTGAACGGCAACTCCTCTGG+TGG 0.593620 4:-52565450 MsG0480021042.01.T01:intron
CAGTATTTATGATCCACCAC+AGG 0.600228 4:+52565554 MsG0480021041.01.T01:CDS
CCTTTCAACAAAATTCTGAA+CGG 0.625731 4:-52565465 MsG0480021042.01.T01:intron
CGTGCGCCAAATATCTCCTG+TGG 0.633660 4:-52565570 MsG0480021042.01.T01:intron
GAATTCTCCAGATCCACCAG+AGG 0.731482 4:+52565437 MsG0480021041.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAACTAAATC+AGG - Chr4:52564710-52564729 MsG0480021042.01.T01:intron 10.0%
!! AAAAAAAAAAAACTAAATCA+GGG - Chr4:52564709-52564728 MsG0480021042.01.T01:intron 10.0%
!! AAAACACTAAAATAAAATTT+AGG - Chr4:52561841-52561860 MsG0480021042.01.T01:intron 10.0%
!! AAACACTAAAATAAAATTTA+GGG - Chr4:52561840-52561859 MsG0480021042.01.T01:intron 10.0%
!!! TAATTTTATTTATTAACAAG+TGG - Chr4:52563826-52563845 MsG0480021042.01.T01:intron 10.0%
!!! TATATATCTATACATTTTTT+AGG + Chr4:52563448-52563467 MsG0480021041.01.T01:intron 10.0%
!!! TATTATTTTCATTTAGTTTA+AGG + Chr4:52565001-52565020 MsG0480021041.01.T01:intron 10.0%
!! AAATATGTATTTCTCTTAAA+CGG - Chr4:52560496-52560515 MsG0480021042.01.T01:intron 15.0%
!! AAGATTAATTCATATAGTTT+AGG - Chr4:52564875-52564894 MsG0480021042.01.T01:intron 15.0%
!! AATAAAATAATTGTCAACAT+TGG - Chr4:52563777-52563796 MsG0480021042.01.T01:intron 15.0%
!! AATTGTTGTAATAAAAAAGA+AGG - Chr4:52563299-52563318 MsG0480021042.01.T01:intron 15.0%
!! AGATTAATTCATATAGTTTA+GGG - Chr4:52564874-52564893 MsG0480021042.01.T01:intron 15.0%
!! ATTCATATCTTTAGTTATAT+TGG - Chr4:52562785-52562804 MsG0480021042.01.T01:intron 15.0%
!! TTATTACAACAATTTATAGA+AGG + Chr4:52563305-52563324 MsG0480021041.01.T01:intron 15.0%
!! TTCATATCTTTAGTTATATT+GGG - Chr4:52562784-52562803 MsG0480021042.01.T01:intron 15.0%
!!! ATATAGAAAATTTTCGATTA+TGG + Chr4:52563907-52563926 MsG0480021041.01.T01:intron 15.0%
!!! TATTTTAATTATAAAGAAGG+TGG - Chr4:52560221-52560240 MsG0480021042.01.T01:intron 15.0%
!!! TCTTTTGTTTTTTTTGTTTT+TGG + Chr4:52562930-52562949 MsG0480021041.01.T01:intron 15.0%
!! AAAAACGCATAACATAATAA+TGG + Chr4:52560870-52560889 MsG0480021041.01.T01:intron 20.0%
!! AAAACGCATAACATAATAAT+GGG + Chr4:52560871-52560890 MsG0480021041.01.T01:intron 20.0%
!! AATTAGCGTTAATTCATATA+AGG + Chr4:52561205-52561224 MsG0480021041.01.T01:intron 20.0%
!! AGTAGCTTATAAAAACATAA+AGG + Chr4:52563488-52563507 MsG0480021041.01.T01:intron 20.0%
!! AGTGGTGATTATTATAATTA+TGG + Chr4:52565144-52565163 MsG0480021041.01.T01:CDS 20.0%
!! ATAAAGGACTAATAAAAAAG+AGG + Chr4:52563504-52563523 MsG0480021041.01.T01:intron 20.0%
!! ATATATAGATAATATGTGTG+TGG - Chr4:52563435-52563454 MsG0480021042.01.T01:intron 20.0%
!! TAAAGGACTAATAAAAAAGA+GGG + Chr4:52563505-52563524 MsG0480021041.01.T01:intron 20.0%
!! TGTGAAAAAAATGTTTGATT+TGG + Chr4:52562418-52562437 MsG0480021041.01.T01:intron 20.0%
!!! AGATTTGTCAGTATTTTTAT+TGG + Chr4:52561329-52561348 MsG0480021041.01.T01:CDS 20.0%
!!! ATTTAGTTTAAGGACTAAAT+GGG + Chr4:52565011-52565030 MsG0480021041.01.T01:intron 20.0%
!!! CTAATCGAAAAAGTATAAAA+AGG - Chr4:52561169-52561188 MsG0480021042.01.T01:intron 20.0%
!!! GTATTTTGAACATTTACTTT+CGG + Chr4:52560811-52560830 MsG0480021041.01.T01:intron 20.0%
!!! TTTTTCGATTAGTTCAATTA+GGG + Chr4:52561177-52561196 MsG0480021041.01.T01:intron 20.0%
! AAAGGACTAATAAAAAAGAG+GGG + Chr4:52563506-52563525 MsG0480021041.01.T01:intron 25.0%
! AACCAATATAGTCATGTTTA+TGG + Chr4:52563006-52563025 MsG0480021041.01.T01:intron 25.0%
! AAGAAAAGAAAAGATGAAGA+AGG + Chr4:52561014-52561033 MsG0480021041.01.T01:intron 25.0%
! ACTAAATCAGGGTTTAAAAA+AGG - Chr4:52564698-52564717 MsG0480021042.01.T01:intron 25.0%
! AGACACTTAAAATAATCGTT+GGG + Chr4:52563670-52563689 MsG0480021041.01.T01:intron 25.0%
! AGTGTAAACTAAAAATGGTA+AGG - Chr4:52561663-52561682 MsG0480021042.01.T01:intron 25.0%
! AGTTTATAGATCAACTTGAT+GGG + Chr4:52564955-52564974 MsG0480021041.01.T01:intron 25.0%
! ATAAAAAGGTAAAGTGATAG+AGG - Chr4:52561155-52561174 MsG0480021042.01.T01:intron 25.0%
! ATTAAATTTGTGTGGAATTG+TGG - Chr4:52560624-52560643 MsG0480021042.01.T01:intron 25.0%
! ATTAACTCCAAAGTTAATTC+AGG - Chr4:52561930-52561949 MsG0480021042.01.T01:intron 25.0%
! CAACAAACATAAAAACAGAA+GGG - Chr4:52564438-52564457 MsG0480021042.01.T01:intron 25.0%
! CAACATACATTAAATTTGTG+TGG - Chr4:52560632-52560651 MsG0480021042.01.T01:intron 25.0%
! CAATAATTAAGTCCTTATAC+AGG - Chr4:52565258-52565277 MsG0480021042.01.T01:intron 25.0%
! CACACAAATTTAATGTATGT+TGG + Chr4:52560630-52560649 MsG0480021041.01.T01:intron 25.0%
! CATTTGATTACACAGATTAT+AGG - Chr4:52562214-52562233 MsG0480021042.01.T01:intron 25.0%
! GTGATATGTTAACAATTGTT+TGG + Chr4:52562384-52562403 MsG0480021041.01.T01:intron 25.0%
! TAAAGTGAAATGAAATGTTG+TGG - Chr4:52560192-52560211 MsG0480021042.01.T01:intron 25.0%
! TACTATTGCAACAATTAATC+AGG + Chr4:52560517-52560536 MsG0480021041.01.T01:intron 25.0%
! TAGTTAACCTTCTCATAAAT+TGG - Chr4:52563269-52563288 MsG0480021042.01.T01:intron 25.0%
! TAGTTTATAGATCAACTTGA+TGG + Chr4:52564954-52564973 MsG0480021041.01.T01:intron 25.0%
! TATTGAACCTGAATTAACTT+TGG + Chr4:52561920-52561939 MsG0480021041.01.T01:intron 25.0%
! TTCGCTAAGATATATGAAAA+TGG + Chr4:52564782-52564801 MsG0480021041.01.T01:intron 25.0%
! TTTCATGTTAGAATTGCAAT+TGG + Chr4:52561386-52561405 MsG0480021041.01.T01:intron 25.0%
!! AAAGTTAATTCAGGTTCAAT+AGG - Chr4:52561921-52561940 MsG0480021042.01.T01:intron 25.0%
!! AGTTTATCTTTTATTCCCAT+TGG + Chr4:52560547-52560566 MsG0480021041.01.T01:intron 25.0%
!! AGTTTGTTTAGTTAGGTATT+AGG + Chr4:52561777-52561796 MsG0480021041.01.T01:intron 25.0%
!! CATTTAGTTTAAGGACTAAA+TGG + Chr4:52565010-52565029 MsG0480021041.01.T01:intron 25.0%
!! CATTTTCTGACAAGTTTAAT+AGG - Chr4:52563175-52563194 MsG0480021042.01.T01:intron 25.0%
!! TCATCAAAACTCATGTTTTA+AGG + Chr4:52564307-52564326 MsG0480021041.01.T01:intron 25.0%
!! TCTTTAGTTATATTGGGTTT+TGG - Chr4:52562778-52562797 MsG0480021042.01.T01:intron 25.0%
!! TTGCAAAAGTTTGTTTAGTT+AGG + Chr4:52561770-52561789 MsG0480021041.01.T01:intron 25.0%
!!! AGAAGAGATTGATATTTTTG+AGG - Chr4:52564757-52564776 MsG0480021042.01.T01:intron 25.0%
!!! ATTAACTTTGGAGTTAATGA+TGG + Chr4:52561932-52561951 MsG0480021041.01.T01:intron 25.0%
!!! CTTTTTCGATTAGTTCAATT+AGG + Chr4:52561176-52561195 MsG0480021041.01.T01:intron 25.0%
!!! GAAGAGATTGATATTTTTGA+GGG - Chr4:52564756-52564775 MsG0480021042.01.T01:intron 25.0%
!!! TTAGTAGGTTTTGTTATTCA+TGG + Chr4:52562014-52562033 MsG0480021041.01.T01:intron 25.0%
AACAAAGTATGATCAACTGA+TGG - Chr4:52562315-52562334 MsG0480021042.01.T01:intron 30.0%
AAGGACTAATAAAAAAGAGG+GGG + Chr4:52563507-52563526 MsG0480021041.01.T01:intron 30.0%
AATGGGTGAAAGAGTTATTT+AGG + Chr4:52565028-52565047 MsG0480021041.01.T01:intron 30.0%
AATTATGCTCTTTACCCAAA+CGG + Chr4:52560030-52560049 MsG0480021041.01.T01:CDS 30.0%
AATTCTTTCTGCAATTAACG+TGG + Chr4:52560373-52560392 MsG0480021041.01.T01:intron 30.0%
AATTTGATGTGAATTGTGTG+AGG - Chr4:52564068-52564087 MsG0480021042.01.T01:intron 30.0%
ACAAATCTTCTCAAGAATAG+TGG - Chr4:52561317-52561336 MsG0480021042.01.T01:intron 30.0%
ACCGATAATTTCCAGAAAAA+AGG - Chr4:52565100-52565119 MsG0480021042.01.T01:intron 30.0%
ACCTCAATTTAAAAACTGAG+TGG - Chr4:52564557-52564576 MsG0480021042.01.T01:intron 30.0%
AGAATTGCAATGAGAATGTT+TGG + Chr4:52561484-52561503 MsG0480021041.01.T01:intron 30.0%
AGACTTATACTGAAGTCATA+AGG + Chr4:52565359-52565378 MsG0480021041.01.T01:intron 30.0%
ATCCATTTAAGTCACTCATA+AGG - Chr4:52565182-52565201 MsG0480021042.01.T01:intron 30.0%
ATGATATGTTGTTGTGTGTA+GGG - Chr4:52563367-52563386 MsG0480021042.01.T01:intron 30.0%
ATGGGTGAAAGAGTTATTTA+GGG + Chr4:52565029-52565048 MsG0480021041.01.T01:intron 30.0%
ATTCAGATATGTGGCTAAAA+AGG - Chr4:52562891-52562910 MsG0480021042.01.T01:intron 30.0%
ATTGTTGCAAGGAAAATGAT+TGG + Chr4:52563223-52563242 MsG0480021041.01.T01:intron 30.0%
CAATTCAACATTCAGATATG+TGG - Chr4:52562900-52562919 MsG0480021042.01.T01:intron 30.0%
CCAACATAACAATAATCAAC+CGG - Chr4:52564495-52564514 MsG0480021042.01.T01:intron 30.0%
CCGATAATTTCCAGAAAAAA+GGG - Chr4:52565099-52565118 MsG0480021042.01.T01:intron 30.0%
CCTCAATTTAAAAACTGAGT+GGG - Chr4:52564556-52564575 MsG0480021042.01.T01:intron 30.0%
CCTTTCAACAAAATTCTGAA+CGG - Chr4:52565468-52565487 MsG0480021042.01.T01:intron 30.0%
CGATAATTTCCAGAAAAAAG+GGG - Chr4:52565098-52565117 MsG0480021042.01.T01:intron 30.0%
CTTCTCAATATAGAACAGAA+GGG - Chr4:52564902-52564921 MsG0480021042.01.T01:intron 30.0%
GACTTATACTGAAGTCATAA+GGG + Chr4:52565360-52565379 MsG0480021041.01.T01:intron 30.0%
GAGACACTTAAAATAATCGT+TGG + Chr4:52563669-52563688 MsG0480021041.01.T01:intron 30.0%
GCAACAAACATAAAAACAGA+AGG - Chr4:52564439-52564458 MsG0480021042.01.T01:intron 30.0%
GGTCAAGTGTAAACTAAAAA+TGG - Chr4:52561668-52561687 MsG0480021042.01.T01:intron 30.0%
GTCCATAAACATGACTATAT+TGG - Chr4:52563011-52563030 MsG0480021042.01.T01:intron 30.0%
TAAGCAACCAATTTATGAGA+AGG + Chr4:52563259-52563278 MsG0480021041.01.T01:intron 30.0%
TAAGGACTTAATTATTGCGT+TGG + Chr4:52565261-52565280 MsG0480021041.01.T01:intron 30.0%
TCAGAATCATTACAACAAAC+AGG - Chr4:52564468-52564487 MsG0480021042.01.T01:intron 30.0%
TCATAGTTCTCTTCATTAGT+AGG + Chr4:52561999-52562018 MsG0480021041.01.T01:intron 30.0%
TCCTTATACAGGAATATATC+AGG - Chr4:52565247-52565266 MsG0480021042.01.T01:intron 30.0%
TCTTCTCAATATAGAACAGA+AGG - Chr4:52564903-52564922 MsG0480021042.01.T01:intron 30.0%
TGCTCAAGTATGTAGATATT+TGG - Chr4:52561961-52561980 MsG0480021042.01.T01:intron 30.0%
TGGAGCAATGAAGTAAAATA+TGG + Chr4:52560650-52560669 MsG0480021041.01.T01:intron 30.0%
TGGATCATAAATACTGGAAT+CGG - Chr4:52565550-52565569 MsG0480021042.01.T01:intron 30.0%
TGTGTTTGATGTGTTTATGT+TGG + Chr4:52561867-52561886 MsG0480021041.01.T01:intron 30.0%
TTATTAGCCGATCAACTAAT+GGG + Chr4:52562647-52562666 MsG0480021041.01.T01:intron 30.0%
TTCAGATATGTGGCTAAAAA+GGG - Chr4:52562890-52562909 MsG0480021042.01.T01:intron 30.0%
TTCTGTTCTATATTGAGAAG+AGG + Chr4:52564902-52564921 MsG0480021041.01.T01:intron 30.0%
TTGTTGCAAGGAAAATGATT+GGG + Chr4:52563224-52563243 MsG0480021041.01.T01:intron 30.0%
TTTATTAGCCGATCAACTAA+TGG + Chr4:52562646-52562665 MsG0480021041.01.T01:intron 30.0%
! CAGTATAAAACCCAGTTTTA+CGG + Chr4:52560413-52560432 MsG0480021041.01.T01:intron 30.0%
! CGTTCAGAATTTTGTTGAAA+GGG + Chr4:52565466-52565485 MsG0480021041.01.T01:CDS 30.0%
! GGAAATTATCGGTTGATATT+AGG + Chr4:52565107-52565126 MsG0480021041.01.T01:intron 30.0%
! TCTGAAATCTGAATTGCAAT+TGG + Chr4:52561453-52561472 MsG0480021041.01.T01:intron 30.0%
! TTCACTTTGTTTCTCAAAAG+AGG - Chr4:52565504-52565523 MsG0480021042.01.T01:intron 30.0%
! TTGTAATGATTCTGAGAAAC+CGG + Chr4:52564473-52564492 MsG0480021041.01.T01:intron 30.0%
!! ACATGAGTTTTGATGAACTT+AGG - Chr4:52564303-52564322 MsG0480021042.01.T01:intron 30.0%
!! ATGTTTGATTTGGTAGTCAT+TGG + Chr4:52562428-52562447 MsG0480021041.01.T01:intron 30.0%
!! GTTTTGGATTGAAAATGGAT+GGG - Chr4:52560930-52560949 MsG0480021042.01.T01:intron 30.0%
!! TTAGTTATATTGGGTTTTGG+AGG - Chr4:52562775-52562794 MsG0480021042.01.T01:intron 30.0%
!!! AGATGTGATCTGTTTTTTGT+TGG + Chr4:52561241-52561260 MsG0480021041.01.T01:intron 30.0%
!!! CCCTTTTTTCTGGAAATTAT+CGG + Chr4:52565096-52565115 MsG0480021041.01.T01:intron 30.0%
!!! GATGTGATCTGTTTTTTGTT+GGG + Chr4:52561242-52561261 MsG0480021041.01.T01:intron 30.0%
!!! GTGTTTTTTTTTTTGCGTGA+CGG + Chr4:52560714-52560733 MsG0480021041.01.T01:intron 30.0%
!!! TAGGTTTTGACTTTTACTAG+TGG + Chr4:52565126-52565145 MsG0480021041.01.T01:intron 30.0%
AAATTGCATATGGAAGAAGG+GGG - Chr4:52560295-52560314 MsG0480021042.01.T01:intron 35.0%
AACATGTTGCTAACAGTGTT+GGG + Chr4:52563388-52563407 MsG0480021041.01.T01:intron 35.0%
AAGCACTCTATGTGATTTCT+GGG + Chr4:52564245-52564264 MsG0480021041.01.T01:intron 35.0%
AATTCTGCTCTTTACCCAAA+CGG - Chr4:52560845-52560864 MsG0480021042.01.T01:intron 35.0%
ACCTATCAAAAGGGAAAAGA+GGG - Chr4:52562094-52562113 MsG0480021042.01.T01:intron 35.0%
AGAATTGGAAGAAGAACTTG+AGG - Chr4:52560318-52560337 MsG0480021042.01.T01:intron 35.0%
AGGAAATTGCATATGGAAGA+AGG - Chr4:52560298-52560317 MsG0480021042.01.T01:intron 35.0%
ATTTGACACAAAAACGTGAC+TGG + Chr4:52564154-52564173 MsG0480021041.01.T01:intron 35.0%
CAGTATAAGTCTGAGAATCA+GGG - Chr4:52565351-52565370 MsG0480021042.01.T01:intron 35.0%
CATTACAACAAACAGGTTAC+AGG - Chr4:52564461-52564480 MsG0480021042.01.T01:intron 35.0%
CCGGTTGATTATTGTTATGT+TGG + Chr4:52564492-52564511 MsG0480021041.01.T01:intron 35.0%
CGCTGGTATATAGTTTACAA+CGG - Chr4:52562177-52562196 MsG0480021042.01.T01:intron 35.0%
CTAAAAATGGTAAGGTTGCT+TGG - Chr4:52561655-52561674 MsG0480021042.01.T01:intron 35.0%
CTGAATGTTGAATTGAGCAA+AGG + Chr4:52562905-52562924 MsG0480021041.01.T01:intron 35.0%
GAAATTGCATATGGAAGAAG+GGG - Chr4:52560296-52560315 MsG0480021042.01.T01:intron 35.0%
GAACTTGAGGAAATTGCATA+TGG - Chr4:52560305-52560324 MsG0480021042.01.T01:intron 35.0%
GAAGAGAACTATGAACCTTT+GGG - Chr4:52561993-52562012 MsG0480021042.01.T01:intron 35.0%
GAATTGAAGCTATTGTTGCA+AGG + Chr4:52563212-52563231 MsG0480021041.01.T01:intron 35.0%
GACATCAAAAACCTTGATGT+CGG + Chr4:52564650-52564669 MsG0480021041.01.T01:intron 35.0%
GATGATATGTTGTTGTGTGT+AGG - Chr4:52563368-52563387 MsG0480021042.01.T01:intron 35.0%
GCAACAATTAATCAGGACAT+TGG + Chr4:52560524-52560543 MsG0480021041.01.T01:intron 35.0%
GCCTGATATATTCCTGTATA+AGG + Chr4:52565243-52565262 MsG0480021041.01.T01:intron 35.0%
GGAAATTGCATATGGAAGAA+GGG - Chr4:52560297-52560316 MsG0480021042.01.T01:intron 35.0%
GGATCATAAATACTGGAATC+GGG - Chr4:52565549-52565568 MsG0480021042.01.T01:intron 35.0%
GGCAATATGGACATTTACTT+GGG - Chr4:52560067-52560086 MsG0480021042.01.T01:intron 35.0%
GGTACAAGGATACAAAAAGA+GGG - Chr4:52564417-52564436 MsG0480021042.01.T01:intron 35.0%
GTGTGTGGTTATATCTAACT+GGG - Chr4:52563420-52563439 MsG0480021042.01.T01:intron 35.0%
TACCTATCAAAAGGGAAAAG+AGG - Chr4:52562095-52562114 MsG0480021042.01.T01:intron 35.0%
TAGAGGAAGAAAAACAAACC+TGG - Chr4:52561138-52561157 MsG0480021042.01.T01:intron 35.0%
TAGTTTCCAGACTAACTTGA+CGG - Chr4:52564830-52564849 MsG0480021042.01.T01:intron 35.0%
TATGGACATTTACTTGGGAA+CGG - Chr4:52560062-52560081 MsG0480021042.01.T01:intron 35.0%
TCAGTATAAGTCTGAGAATC+AGG - Chr4:52565352-52565371 MsG0480021042.01.T01:intron 35.0%
TCTGACAAGTTTAATAGGAG+AGG - Chr4:52563170-52563189 MsG0480021042.01.T01:intron 35.0%
TGAAGAGAACTATGAACCTT+TGG - Chr4:52561994-52562013 MsG0480021042.01.T01:intron 35.0%
TGCCTTATGAGTGACTTAAA+TGG + Chr4:52565177-52565196 MsG0480021041.01.T01:CDS 35.0%
TGCTGCATTACCTATCAAAA+GGG - Chr4:52562103-52562122 MsG0480021042.01.T01:intron 35.0%
TGGGTGAAAGAGTTATTTAG+GGG + Chr4:52565030-52565049 MsG0480021041.01.T01:intron 35.0%
TGTAATTCTGTTTCGCTAGT+TGG + Chr4:52562287-52562306 MsG0480021041.01.T01:intron 35.0%
TGTGTGTGGTTATATCTAAC+TGG - Chr4:52563421-52563440 MsG0480021042.01.T01:intron 35.0%
TGTTGCAAGGAAAATGATTG+GGG + Chr4:52563225-52563244 MsG0480021041.01.T01:intron 35.0%
TTCCAATTCTCTCTGTTATG+TGG + Chr4:52560328-52560347 MsG0480021041.01.T01:intron 35.0%
TTCGCTGTATCCTTAGAAAA+TGG + Chr4:52564016-52564035 MsG0480021041.01.T01:intron 35.0%
TTGTAAACAGTGTTCAACTC+CGG + Chr4:52561553-52561572 MsG0480021041.01.T01:intron 35.0%
TTGTGTTCTTTGAATCGTTC+TGG - Chr4:52560996-52561015 MsG0480021042.01.T01:intron 35.0%
! AACACTGTTTACAAAGCATC+TGG - Chr4:52561547-52561566 MsG0480021042.01.T01:intron 35.0%
! ACTTAATTATTGCGTTGGCA+AGG + Chr4:52565266-52565285 MsG0480021041.01.T01:intron 35.0%
! AGAATAGTGGAACTAATCTC+AGG - Chr4:52561304-52561323 MsG0480021042.01.T01:intron 35.0%
! AGTGACTTAAATGGATTTGC+AGG + Chr4:52565186-52565205 MsG0480021041.01.T01:CDS 35.0%
! ATGTGATTTCTGGGTTGAAA+AGG + Chr4:52564254-52564273 MsG0480021041.01.T01:intron 35.0%
! ATGTGGCTATGGATTTTAGA+GGG + Chr4:52560345-52560364 MsG0480021041.01.T01:intron 35.0%
! ATTGGCATCTTGAATTTGCT+AGG + Chr4:52561347-52561366 MsG0480021041.01.T01:CDS 35.0%
! ATTGTGATCTGTGAGTTTTG+TGG - Chr4:52562709-52562728 MsG0480021042.01.T01:intron 35.0%
! CATAAAAACAGAAGGGTACA+AGG - Chr4:52564431-52564450 MsG0480021042.01.T01:intron 35.0%
! CCCACTCAGTTTTTAAATTG+AGG + Chr4:52564553-52564572 MsG0480021041.01.T01:intron 35.0%
! CCGTTCAGAATTTTGTTGAA+AGG + Chr4:52565465-52565484 MsG0480021041.01.T01:CDS 35.0%
! CTTAATTATTGCGTTGGCAA+GGG + Chr4:52565267-52565286 MsG0480021041.01.T01:intron 35.0%
! TATGTGGCTATGGATTTTAG+AGG + Chr4:52560344-52560363 MsG0480021041.01.T01:intron 35.0%
! TCCATTTTCAATCCAAAACC+CGG + Chr4:52560931-52560950 MsG0480021041.01.T01:intron 35.0%
! TTGTTTCTCAAAAGAGGATG+TGG - Chr4:52565498-52565517 MsG0480021042.01.T01:intron 35.0%
!! GATGGGTTTTCCATTTTCTA+AGG - Chr4:52564029-52564048 MsG0480021042.01.T01:intron 35.0%
!! TTTTGAGGGACTAAAATTGC+TGG - Chr4:52564742-52564761 MsG0480021042.01.T01:intron 35.0%
!!! GGTTTTGGATTGAAAATGGA+TGG - Chr4:52560931-52560950 MsG0480021042.01.T01:intron 35.0%
!!! GTTTATGTTGGTTTTGCTAG+TGG + Chr4:52561879-52561898 MsG0480021041.01.T01:intron 35.0%
!!! TGAGAAATCGCGTTTTGAAA+CGG - Chr4:52560964-52560983 MsG0480021042.01.T01:intron 35.0%
!!! TGTTTTAAGGCTGTTGAAGA+TGG + Chr4:52564320-52564339 MsG0480021041.01.T01:intron 35.0%
AAACGGCTGAGTTAACTCAA+AGG - Chr4:52560479-52560498 MsG0480021042.01.T01:intron 40.0%
AACGACGAATTCGAATCCAT+CGG - Chr4:52561064-52561083 MsG0480021042.01.T01:intron 40.0%
AATCTAGACACGCATCAATC+AGG - Chr4:52562263-52562282 MsG0480021042.01.T01:intron 40.0%
AGATATGTGGCTAAAAAGGG+TGG - Chr4:52562887-52562906 MsG0480021042.01.T01:intron 40.0%
AGATGCGATGAACGTATATG+AGG + Chr4:52565407-52565426 MsG0480021041.01.T01:CDS 40.0%
AGCCACATAACAGAGAGAAT+TGG - Chr4:52560333-52560352 MsG0480021042.01.T01:intron 40.0%
AGCGTAACTTAACTTACGCA+AGG - Chr4:52560089-52560108 MsG0480021042.01.T01:intron 40.0%
AGCTTATTCTTCTCCATAGC+CGG - Chr4:52562141-52562160 MsG0480021042.01.T01:intron 40.0%
AGTTTCTTTCCTCTCCAAAG+GGG - Chr4:52564214-52564233 MsG0480021042.01.T01:intron 40.0%
ATGCAGATGAATGTCTCTGA+TGG - Chr4:52564109-52564128 MsG0480021042.01.T01:intron 40.0%
CAACATGTTGCTAACAGTGT+TGG + Chr4:52563387-52563406 MsG0480021041.01.T01:intron 40.0%
CAAGGGACAACAAAACCAAT+GGG - Chr4:52560565-52560584 MsG0480021042.01.T01:intron 40.0%
CACGACTCTACGTAATATCA+AGG - Chr4:52564591-52564610 MsG0480021042.01.T01:intron 40.0%
CAGTATTTATGATCCACCAC+AGG + Chr4:52565554-52565573 MsG0480021041.01.T01:CDS 40.0%
CCACAAAGCAATCAAGAGAA+AGG - Chr4:52561747-52561766 MsG0480021042.01.T01:intron 40.0%
CCTTTCTCTTGATTGCTTTG+TGG + Chr4:52561744-52561763 MsG0480021041.01.T01:intron 40.0%
CTGCTGCATTACCTATCAAA+AGG - Chr4:52562104-52562123 MsG0480021042.01.T01:intron 40.0%
CTTGATATTACGTAGAGTCG+TGG + Chr4:52564589-52564608 MsG0480021041.01.T01:intron 40.0%
GAAATATTGGAGCAGGGTTT+AGG - Chr4:52563980-52563999 MsG0480021042.01.T01:intron 40.0%
GAAGAAAAACAAACCTGGAG+AGG - Chr4:52561133-52561152 MsG0480021042.01.T01:intron 40.0%
GAATGCTGAGGTTAAACGAT+GGG - Chr4:52564046-52564065 MsG0480021042.01.T01:intron 40.0%
GACTAATAAAAAAGAGGGGG+AGG + Chr4:52563510-52563529 MsG0480021041.01.T01:intron 40.0%
GAGTTTCTTTCCTCTCCAAA+GGG - Chr4:52564215-52564234 MsG0480021042.01.T01:intron 40.0%
GCGTAACTTAACTTACGCAA+GGG - Chr4:52560088-52560107 MsG0480021042.01.T01:intron 40.0%
GGGCAATATGGACATTTACT+TGG - Chr4:52560068-52560087 MsG0480021042.01.T01:intron 40.0%
GGGTACAAGGATACAAAAAG+AGG - Chr4:52564418-52564437 MsG0480021042.01.T01:intron 40.0%
GGGTGAAAGAGTTATTTAGG+GGG + Chr4:52565031-52565050 MsG0480021041.01.T01:intron 40.0%
GGTGAAAGAGTTATTTAGGG+GGG + Chr4:52565032-52565051 MsG0480021041.01.T01:intron 40.0%
GTTTACAACGGCAACAACAA+TGG - Chr4:52562165-52562184 MsG0480021042.01.T01:intron 40.0%
TAACACGCCCATTAGTTGAT+CGG - Chr4:52562657-52562676 MsG0480021042.01.T01:intron 40.0%
TAACTTACGCAAGGGCAATA+TGG - Chr4:52560080-52560099 MsG0480021042.01.T01:intron 40.0%
TCAGCAAGGCTTCTATATGT+TGG - Chr4:52562956-52562975 MsG0480021042.01.T01:intron 40.0%
TGAGCATTATGACTTCCCAA+AGG + Chr4:52561975-52561994 MsG0480021041.01.T01:intron 40.0%
TGAGTTTCTTTCCTCTCCAA+AGG - Chr4:52564216-52564235 MsG0480021042.01.T01:intron 40.0%
TGCAGATGAATGTCTCTGAT+GGG - Chr4:52564108-52564127 MsG0480021042.01.T01:intron 40.0%
TGGAGAGGAAAGAAACTCAT+TGG + Chr4:52564217-52564236 MsG0480021041.01.T01:intron 40.0%
TGGGGTAGAAGATGAAAGAA+GGG - Chr4:52560261-52560280 MsG0480021042.01.T01:intron 40.0%
TGTATCTCTTCAGCAACATC+TGG + Chr4:52562749-52562768 MsG0480021041.01.T01:intron 40.0%
TTCTCTCTGTTATGTGGCTA+TGG + Chr4:52560334-52560353 MsG0480021041.01.T01:intron 40.0%
TTGGGGTAGAAGATGAAAGA+AGG - Chr4:52560262-52560281 MsG0480021042.01.T01:intron 40.0%
TTTAGGGGGGACTAAATTGA+TGG + Chr4:52565045-52565064 MsG0480021041.01.T01:intron 40.0%
! AATGGATTTGCAGGTGTTTC+AGG + Chr4:52565195-52565214 MsG0480021041.01.T01:CDS 40.0%
! AGGTATATTCTAGTTGTCGC+TGG - Chr4:52562194-52562213 MsG0480021042.01.T01:intron 40.0%
! AGTTTTGCTGAAAGGGAACA+CGG + Chr4:52561265-52561284 MsG0480021041.01.T01:CDS 40.0%
! CAATACGTCGTCCATTCTTT+TGG - Chr4:52565293-52565312 MsG0480021042.01.T01:intron 40.0%
! CTTTTGATAGGTAATGCAGC+AGG + Chr4:52562102-52562121 MsG0480021041.01.T01:intron 40.0%
! GAAGCACTCTATGTGATTTC+TGG + Chr4:52564244-52564263 MsG0480021041.01.T01:intron 40.0%
! GGAGAAGTATATGACACTGT+AGG + Chr4:52562449-52562468 MsG0480021041.01.T01:intron 40.0%
! GGTTCTACTGACTAAAGATG+CGG + Chr4:52564923-52564942 MsG0480021041.01.T01:intron 40.0%
! TCCCTCTTTTCCCTTTTGAT+AGG + Chr4:52562090-52562109 MsG0480021041.01.T01:intron 40.0%
! TGTTGGGAGTTTTGCTGAAA+GGG + Chr4:52561258-52561277 MsG0480021041.01.T01:CDS 40.0%
! TTGTTGGGAGTTTTGCTGAA+AGG + Chr4:52561257-52561276 MsG0480021041.01.T01:CDS 40.0%
!! CTGTGGTGGATCATAAATAC+TGG - Chr4:52565556-52565575 MsG0480021042.01.T01:intron 40.0%
!! TATCGATTCAGCAGATGCAA+GGG - Chr4:52560582-52560601 MsG0480021042.01.T01:intron 40.0%
!!! ACCGGGTTTTGGATTGAAAA+TGG - Chr4:52560935-52560954 MsG0480021042.01.T01:intron 40.0%
!!! GAGAAATCGCGTTTTGAAAC+GGG - Chr4:52560963-52560982 MsG0480021042.01.T01:intron 40.0%
!!! GGTTTTAGAGAATACCACGA+CGG + Chr4:52564175-52564194 MsG0480021041.01.T01:intron 40.0%
!!! TCAGACTATCCCCTTTTTTC+TGG + Chr4:52565086-52565105 MsG0480021041.01.T01:intron 40.0%
!!! TGTTGGTTTTGCTAGTGGAA+AGG + Chr4:52561884-52561903 MsG0480021041.01.T01:intron 40.0%
AAAGGTTCACAGTAGCGATC+TGG - Chr4:52564680-52564699 MsG0480021042.01.T01:intron 45.0%
AACAACCGCACTATCATCGA+TGG + Chr4:52563062-52563081 MsG0480021041.01.T01:intron 45.0%
AACCCGTCCATCAATGACAT+GGG - Chr4:52560900-52560919 MsG0480021042.01.T01:intron 45.0%
AAGGTTCACAGTAGCGATCT+GGG - Chr4:52564679-52564698 MsG0480021042.01.T01:intron 45.0%
ACACTTCTCTGCCGTAAAAC+TGG - Chr4:52560427-52560446 MsG0480021042.01.T01:intron 45.0%
AGAAGTTTCTCTCGCTCTCA+AGG + Chr4:52564380-52564399 MsG0480021041.01.T01:CDS 45.0%
AGAGGTAAGCATGTTGCGAA+TGG - Chr4:52561115-52561134 MsG0480021042.01.T01:intron 45.0%
ATAGAAGCCTTGCTGAGCAA+AGG + Chr4:52562960-52562979 MsG0480021041.01.T01:intron 45.0%
ATAGAAGCCTTTGCTCAGCA+AGG - Chr4:52562970-52562989 MsG0480021042.01.T01:intron 45.0%
CACTTCTCTGCCGTAAAACT+GGG - Chr4:52560426-52560445 MsG0480021042.01.T01:intron 45.0%
CATAAGGGCTTCTTGAGTAG+TGG + Chr4:52565375-52565394 MsG0480021041.01.T01:intron 45.0%
CGCAATACAGGACAGACAAA+TGG + Chr4:52562483-52562502 MsG0480021041.01.T01:intron 45.0%
GAATTGTGTGAGGAATGCTG+AGG - Chr4:52564058-52564077 MsG0480021042.01.T01:intron 45.0%
GATCCACCACAGGAGATATT+TGG + Chr4:52565564-52565583 MsG0480021041.01.T01:CDS 45.0%
GCAAGGGACAACAAAACCAA+TGG - Chr4:52560566-52560585 MsG0480021042.01.T01:intron 45.0%
GCAGATGAATGTCTCTGATG+GGG - Chr4:52564107-52564126 MsG0480021042.01.T01:intron 45.0%
GGAATGCTGAGGTTAAACGA+TGG - Chr4:52564047-52564066 MsG0480021042.01.T01:intron 45.0%
GGACGACGTATTGCAGTTAT+GGG + Chr4:52565300-52565319 MsG0480021041.01.T01:intron 45.0%
GTGAAACTGATCAGTTCCGA+TGG + Chr4:52561045-52561064 MsG0480021041.01.T01:intron 45.0%
GTGATAACCTCGATTCCCAA+GGG - Chr4:52561595-52561614 MsG0480021042.01.T01:intron 45.0%
GTGCATGTCATTCGCAATAC+AGG + Chr4:52562471-52562490 MsG0480021041.01.T01:intron 45.0%
TAAAAAGGGTGGCATCATGG+TGG - Chr4:52562876-52562895 MsG0480021042.01.T01:intron 45.0%
TAACCCGTCCATCAATGACA+TGG - Chr4:52560901-52560920 MsG0480021042.01.T01:intron 45.0%
TATACGTTCATCGCATCTGC+AGG - Chr4:52565405-52565424 MsG0480021042.01.T01:intron 45.0%
TGAAAGCCGTCAAGTTAGTC+TGG + Chr4:52564821-52564840 MsG0480021041.01.T01:intron 45.0%
TGGACGACGTATTGCAGTTA+TGG + Chr4:52565299-52565318 MsG0480021041.01.T01:intron 45.0%
TGTGATAACCTCGATTCCCA+AGG - Chr4:52561596-52561615 MsG0480021042.01.T01:intron 45.0%
TTTCGGATGAGCAACCGTTT+GGG + Chr4:52560828-52560847 MsG0480021041.01.T01:intron 45.0%
! GCGAATGGTTTGTGAAACCA+TGG - Chr4:52561100-52561119 MsG0480021042.01.T01:intron 45.0%
! GTTATGGGAAAGCATGAGGA+AGG + Chr4:52565315-52565334 MsG0480021041.01.T01:intron 45.0%
! GTTTCAGGTGATGCAAAAGC+AGG + Chr4:52565210-52565229 MsG0480021041.01.T01:CDS 45.0%
! TGCAGTTATGGGAAAGCATG+AGG + Chr4:52565311-52565330 MsG0480021041.01.T01:intron 45.0%
!! CTATCGATTCAGCAGATGCA+AGG - Chr4:52560583-52560602 MsG0480021042.01.T01:intron 45.0%
!! TTTAGGCGTCGATGATTGTG+CGG - Chr4:52563097-52563116 MsG0480021042.01.T01:intron 45.0%
!!! GTTTTGAAACGGGTCGTTAC+CGG - Chr4:52560953-52560972 MsG0480021042.01.T01:intron 45.0%
!!! TTTTGAAACGGGTCGTTACC+GGG - Chr4:52560952-52560971 MsG0480021042.01.T01:intron 45.0%
!!! AATTATTTTAATTATAAAGA+AGG - Chr4:52560224-52560243 MsG0480021042.01.T01:intron 5.0%
AATACCACGACGGAAGACCA+AGG + Chr4:52564185-52564204 MsG0480021041.01.T01:intron 50.0%
ACATCATCCGCTCAGCGTTT+AGG - Chr4:52563114-52563133 MsG0480021042.01.T01:intron 50.0%
AGCGTGAGTTAACTCACGCT+GGG + Chr4:52560686-52560705 MsG0480021041.01.T01:intron 50.0%
AGGTGATGCAAAAGCAGGAC+TGG + Chr4:52565215-52565234 MsG0480021041.01.T01:CDS 50.0%
ATACCACGACGGAAGACCAA+GGG + Chr4:52564186-52564205 MsG0480021041.01.T01:intron 50.0%
ATGTCCTGCATACGCGATTG+AGG - Chr4:52564635-52564654 MsG0480021042.01.T01:intron 50.0%
ATGTTTCCATGCCACGACCA+CGG - Chr4:52561704-52561723 MsG0480021042.01.T01:intron 50.0%
ATTCTGAACGGCAACTCCTC+TGG - Chr4:52565456-52565475 MsG0480021042.01.T01:intron 50.0%
CGTTGACAAAGAAGCTGCCA+TGG + Chr4:52561080-52561099 MsG0480021041.01.T01:intron 50.0%
CTGCCCATGTCATTGATGGA+CGG + Chr4:52560894-52560913 MsG0480021041.01.T01:intron 50.0%
CTTTCGGATGAGCAACCGTT+TGG + Chr4:52560827-52560846 MsG0480021041.01.T01:intron 50.0%
GAATTCTCCAGATCCACCAG+AGG + Chr4:52565437-52565456 MsG0480021041.01.T01:CDS 50.0%
GCGTGAGTTAACATGCGTAG+AGG + Chr4:52560789-52560808 MsG0480021041.01.T01:intron 50.0%
GGCTAAAAAGGGTGGCATCA+TGG - Chr4:52562879-52562898 MsG0480021042.01.T01:intron 50.0%
GGGAACGGACAAAACCGTTT+GGG - Chr4:52560047-52560066 MsG0480021042.01.T01:intron 50.0%
GTGTTCAACTCCGGATTACC+AGG + Chr4:52561562-52561581 MsG0480021041.01.T01:intron 50.0%
GTTGGCAAGGGCCAAAAGAA+TGG + Chr4:52565279-52565298 MsG0480021041.01.T01:intron 50.0%
TGGGAACGGACAAAACCGTT+TGG - Chr4:52560048-52560067 MsG0480021042.01.T01:intron 50.0%
! AACTGTTGCTTGTCCGGCTA+TGG + Chr4:52562125-52562144 MsG0480021041.01.T01:intron 50.0%
! AAGGGGGTGTGTTGTTGTTG+GGG - Chr4:52560279-52560298 MsG0480021042.01.T01:intron 50.0%
! AGAAGGGGGTGTGTTGTTGT+TGG - Chr4:52560281-52560300 MsG0480021042.01.T01:intron 50.0%
! AGCAGGAACTGTTGCTTGTC+CGG + Chr4:52562119-52562138 MsG0480021041.01.T01:intron 50.0%
! ATTACCAGGCCACTTTCCCT+TGG + Chr4:52561576-52561595 MsG0480021041.01.T01:intron 50.0%
! GAAGGGGGTGTGTTGTTGTT+GGG - Chr4:52560280-52560299 MsG0480021042.01.T01:intron 50.0%
! GCTCACCATCGATGATAGTG+CGG - Chr4:52563070-52563089 MsG0480021042.01.T01:intron 50.0%
! TGCCCATGTCATTGATGGAC+GGG + Chr4:52560895-52560914 MsG0480021041.01.T01:intron 50.0%
! TTACCAGGCCACTTTCCCTT+GGG + Chr4:52561577-52561596 MsG0480021041.01.T01:intron 50.0%
!! GTCATTGATGGACGGGTTAG+TGG + Chr4:52560902-52560921 MsG0480021041.01.T01:intron 50.0%
ACAGCCTCAATCGCGTATGC+AGG + Chr4:52564628-52564647 MsG0480021041.01.T01:intron 55.0%
AGTGACAGTGTGCAGCCTTC+TGG - Chr4:52563041-52563060 MsG0480021042.01.T01:intron 55.0%
ATCGACGCCTAAACGCTGAG+CGG + Chr4:52563104-52563123 MsG0480021041.01.T01:intron 55.0%
ATTCCCAAGGGAAAGTGGCC+TGG - Chr4:52561583-52561602 MsG0480021042.01.T01:intron 55.0%
CAGCGTGAGTTAACTCACGC+TGG + Chr4:52560685-52560704 MsG0480021041.01.T01:intron 55.0%
CAGCGTGAGTTAACTCACGC+TGG - Chr4:52560704-52560685 MsG0480021042.01.T01:intron 55.0%
CCACTTTCCCTTGGGAATCG+AGG + Chr4:52561585-52561604 MsG0480021041.01.T01:intron 55.0%
CCTCGATTCCCAAGGGAAAG+TGG - Chr4:52561588-52561607 MsG0480021042.01.T01:intron 55.0%
CGCAACATGCTTACCTCTCC+AGG + Chr4:52561117-52561136 MsG0480021041.01.T01:intron 55.0%
CGTGCGCCAAATATCTCCTG+TGG - Chr4:52565573-52565592 MsG0480021042.01.T01:intron 55.0%
GCGCCAAATATCTCCTGTGG+TGG - Chr4:52565570-52565589 MsG0480021042.01.T01:intron 55.0%
GCTGAGCGGATGATGTCTGA+TGG + Chr4:52563118-52563137 MsG0480021041.01.T01:intron 55.0%
GGGAAAGTGGCCTGGTAATC+CGG - Chr4:52561575-52561594 MsG0480021042.01.T01:intron 55.0%
TACCACGACGGAAGACCAAG+GGG + Chr4:52564187-52564206 MsG0480021041.01.T01:intron 55.0%
TGGGCTGCCCATGTCATTGA+TGG + Chr4:52560890-52560909 MsG0480021041.01.T01:intron 55.0%
TTATGGACCGTCACGCCAGA+AGG + Chr4:52563023-52563042 MsG0480021041.01.T01:intron 55.0%
! AACGGGTCGTTACCGGGTTT+TGG - Chr4:52560946-52560965 MsG0480021042.01.T01:intron 55.0%
AAGGGTGGCATCATGGTGGC+AGG - Chr4:52562872-52562891 MsG0480021042.01.T01:intron 60.0%
CTGAACGGCAACTCCTCTGG+TGG - Chr4:52565453-52565472 MsG0480021042.01.T01:intron 60.0%
GAAGACCAAGGGGTCCCCTT+TGG + Chr4:52564197-52564216 MsG0480021041.01.T01:intron 60.0%
GATCTGGGCTGCCGACATCA+AGG - Chr4:52564664-52564683 MsG0480021042.01.T01:intron 60.0%
TGTGCAGCCTTCTGGCGTGA+CGG - Chr4:52563033-52563052 MsG0480021042.01.T01:intron 60.0%
! GGCAACTCCTCTGGTGGATC+TGG - Chr4:52565447-52565466 MsG0480021042.01.T01:intron 60.0%
CCTCTCCAAAGGGGACCCCT+TGG - Chr4:52564205-52564224 MsG0480021042.01.T01:intron 65.0%
! CCAAGGGGTCCCCTTTGGAG+AGG + Chr4:52564202-52564221 MsG0480021041.01.T01:intron 65.0%
! GACCCCTTGGTCTTCCGTCG+TGG - Chr4:52564192-52564211 MsG0480021042.01.T01:intron 65.0%
CATGCCACGACCACGGACGC+AGG - Chr4:52561697-52561716 MsG0480021042.01.T01:intron 70.0%
CGACCACGGACGCAGGCTAG+CGG - Chr4:52561690-52561709 MsG0480021042.01.T01:intron 70.0%
CTAGCCTGCGTCCGTGGTCG+TGG + Chr4:52561690-52561709 MsG0480021041.01.T01:intron 70.0%
CTGCGTCCGTGGTCGTGGCA+TGG + Chr4:52561695-52561714 MsG0480021041.01.T01:intron 70.0%
GACCACGGACGCAGGCTAGC+GGG - Chr4:52561689-52561708 MsG0480021042.01.T01:intron 70.0%
! GACCCGCTAGCCTGCGTCCG+TGG + Chr4:52561684-52561703 MsG0480021041.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 52560003 52565596 52560003 ID=MsG0480021041.01;Name=MsG0480021041.01
Chr4 mRNA 52560003 52565596 52560003 ID=MsG0480021041.01.T01;Parent=MsG0480021041.01;Name=MsG0480021041.01.T01;_AED=0.54;_eAED=0.59;_QI=0|0|0|0.8|0|0|5|0|203
Chr4 exon 52560003 52560091 52560003 ID=MsG0480021041.01.T01:exon:851;Parent=MsG0480021041.01.T01
Chr4 exon 52561243 52561368 52561243 ID=MsG0480021041.01.T01:exon:852;Parent=MsG0480021041.01.T01
Chr4 exon 52564329 52564401 52564329 ID=MsG0480021041.01.T01:exon:853;Parent=MsG0480021041.01.T01
Chr4 exon 52565129 52565236 52565129 ID=MsG0480021041.01.T01:exon:854;Parent=MsG0480021041.01.T01
Chr4 exon 52565381 52565596 52565381 ID=MsG0480021041.01.T01:exon:855;Parent=MsG0480021041.01.T01
Chr4 CDS 52560003 52560091 52560003 ID=MsG0480021041.01.T01:cds;Parent=MsG0480021041.01.T01
Chr4 CDS 52561243 52561368 52561243 ID=MsG0480021041.01.T01:cds;Parent=MsG0480021041.01.T01
Chr4 CDS 52564329 52564401 52564329 ID=MsG0480021041.01.T01:cds;Parent=MsG0480021041.01.T01
Chr4 CDS 52565129 52565236 52565129 ID=MsG0480021041.01.T01:cds;Parent=MsG0480021041.01.T01
Chr4 CDS 52565381 52565596 52565381 ID=MsG0480021041.01.T01:cds;Parent=MsG0480021041.01.T01
Gene Sequence

>MsG0480021041.01.T01

AGCAATTCTAAATGGGATAAGAAAAAGAATTATGCTCTTTACCCAAACGGTTTTGTCCGTTCCCAAGTAAATGTCCATATTGCCCTTGCATGTGATCTGTTTTTTGTTGGGAGTTTTGCTGAAAGGGAACACGGACAAGTGACTTTTCCTGAGATTAGTTCCACTATTCTTGAGAAGATTTGTCAGTATTTTTATTGGCATCTTGAATTTGCTAGGCTGTTGAAGATGGATTTGATTGCTGTTCTCACTGAACTTGAGCGTCAACAAGAAGTTTCTCTCGCTCTCAAGGTTTTGACTTTTACTAGTGGTGATTATTATAATTATGGTTGTAATGTTTGCCTTATGAGTGACTTAAATGGATTTGCAGGTGTTTCAGGTGATGCAAAAGCAGGACTGGGCTTCTTGAGTAGTGGATCTCCTGCAGATGCGATGAACGTATATGAGGACATGAAGAATTCTCCAGATCCACCAGAGGAGTTGCCGTTCAGAATTTTGTTGAAAGGGCTTTTGCCACATCCTCTTTTGAGAAACAAAGTGAAACAAGATTTTGAAGAGATCTTTCCCGATTCCAGTATTTATGATCCACCACAGGAGATATTTGGCGCACGCTGA

Protein sequence

>MsG0480021041.01.T01

SNSKWDKKKNYALYPNGFVRSQVNVHIALACDLFFVGSFAEREHGQVTFPEISSTILEKICQYFYWHLEFARLLKMDLIAVLTELERQQEVSLALKVLTFTSGDYYNYGCNVCLMSDLNGFAGVSGDAKAGLGFLSSGSPADAMNVYEDMKNSPDPPEELPFRILLKGLLPHPLLRNKVKQDFEEIFPDSSIYDPPQEIFGAR*