AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047594.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047594.01.T01 MTR_4g130820 53.097 226 37 4 126 282 425 650 5.40e-57 195
MsG0880047594.01.T01 MTR_4g130820 91.176 34 3 0 88 121 326 359 9.83e-15 75.1
MsG0880047594.01.T01 MTR_3g091080 43.750 240 66 4 126 296 403 642 2.34e-46 166
MsG0880047594.01.T01 MTR_1g028370 41.250 240 72 3 126 296 405 644 1.92e-43 158
MsG0880047594.01.T01 MTR_7g117310 37.815 238 78 4 127 294 355 592 3.23e-37 140
MsG0880047594.01.T01 MTR_7g117310 37.815 238 78 4 127 294 409 646 3.60e-37 140
MsG0880047594.01.T01 MTR_8g027755 39.640 222 64 4 127 278 413 634 7.66e-36 136
MsG0880047594.01.T01 MTR_7g117310 36.975 238 80 5 127 294 421 658 1.90e-33 130
MsG0880047594.01.T01 MTR_2g460590 59.633 109 43 1 191 299 507 614 5.70e-33 128
MsG0880047594.01.T01 MTR_2g094860 52.055 146 68 2 151 296 494 637 7.04e-33 128
MsG0880047594.01.T01 MTR_1g064240 63.043 92 34 0 191 282 527 618 2.26e-32 126
MsG0880047594.01.T01 MTR_4g058730 50.758 132 64 1 151 282 476 606 4.73e-32 125
MsG0880047594.01.T01 MTR_7g034605 57.547 106 45 0 177 282 493 598 7.66e-32 125
MsG0880047594.01.T01 MTR_3g109030 60.748 107 41 1 191 297 537 642 2.78e-31 123
MsG0880047594.01.T01 MTR_3g088875 59.783 92 37 0 191 282 499 590 4.09e-29 117
MsG0880047594.01.T01 MTR_2g081110 43.421 76 42 1 204 278 535 610 1.73e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047594.01.T01 AT2G23980 49.115 226 46 4 126 282 406 631 3.02e-53 185
MsG0880047594.01.T01 AT2G23980 49.115 226 46 4 126 282 433 658 3.73e-53 185
MsG0880047594.01.T01 AT2G23980 49.115 226 46 4 126 282 433 658 3.73e-53 185
MsG0880047594.01.T01 AT2G23980 49.115 226 46 4 126 282 433 658 3.73e-53 185
MsG0880047594.01.T01 AT2G23980 49.115 226 46 4 126 282 433 658 3.73e-53 185
MsG0880047594.01.T01 AT2G23980 49.115 226 46 4 126 282 433 658 3.73e-53 185
MsG0880047594.01.T01 AT2G23980 49.115 226 46 4 126 282 456 681 5.99e-53 185
MsG0880047594.01.T01 AT2G23980 49.115 226 46 4 126 282 456 681 5.99e-53 185
MsG0880047594.01.T01 AT2G23980 49.115 226 46 4 126 282 456 681 5.99e-53 185
MsG0880047594.01.T01 AT2G23980 49.115 226 46 4 126 282 456 681 5.99e-53 185
MsG0880047594.01.T01 AT5G57940 49.115 226 46 4 126 282 417 642 1.07e-52 184
MsG0880047594.01.T01 AT5G57940 49.115 226 46 4 126 282 417 642 1.07e-52 184
MsG0880047594.01.T01 AT5G57940 49.115 226 46 4 126 282 410 635 1.29e-52 183
MsG0880047594.01.T01 AT4G30560 48.085 235 53 4 126 291 432 666 3.63e-52 182
MsG0880047594.01.T01 AT4G30560 48.085 235 53 4 126 291 432 666 3.63e-52 182
MsG0880047594.01.T01 AT4G30560 48.085 235 53 4 126 291 406 640 3.73e-52 182
MsG0880047594.01.T01 AT4G30560 48.085 235 53 4 126 291 406 640 3.73e-52 182
MsG0880047594.01.T01 AT4G30560 48.085 235 53 4 126 291 406 640 3.73e-52 182
MsG0880047594.01.T01 AT1G15990 46.018 226 53 5 126 282 421 646 1.66e-46 167
MsG0880047594.01.T01 AT1G19780 44.690 226 56 4 126 282 216 441 1.14e-45 162
MsG0880047594.01.T01 AT1G19780 44.690 226 56 4 126 282 427 652 2.87e-45 163
MsG0880047594.01.T01 AT5G53130 42.920 226 60 3 126 282 405 630 5.43e-44 159
MsG0880047594.01.T01 AT4G01010 40.444 225 65 4 127 282 394 618 2.06e-38 144
MsG0880047594.01.T01 AT4G01010 40.444 225 65 4 127 282 394 618 2.06e-38 144
MsG0880047594.01.T01 AT2G46430 38.496 226 66 5 127 282 397 619 4.72e-34 131
MsG0880047594.01.T01 AT2G46430 38.496 226 66 5 127 282 397 619 4.72e-34 131
MsG0880047594.01.T01 AT2G24610 38.053 226 71 4 126 282 400 625 7.55e-34 131
MsG0880047594.01.T01 AT2G24610 38.053 226 71 4 126 282 415 640 1.30e-33 130
MsG0880047594.01.T01 AT2G28260 51.515 132 63 1 151 282 485 615 3.09e-32 126
MsG0880047594.01.T01 AT2G28260 51.515 132 63 1 151 282 445 575 3.18e-32 126
MsG0880047594.01.T01 AT4G30360 63.043 92 34 0 191 282 534 625 4.96e-32 125
MsG0880047594.01.T01 AT1G01340 51.908 131 62 1 152 282 488 617 4.68e-31 123
MsG0880047594.01.T01 AT1G01340 51.908 131 62 1 152 282 483 612 5.36e-31 122
MsG0880047594.01.T01 AT5G14870 36.161 224 74 6 128 282 370 593 8.24e-30 119
MsG0880047594.01.T01 AT3G48010 46.565 131 69 1 152 282 472 601 6.39e-29 117
MsG0880047594.01.T01 AT2G46440 34.513 226 75 5 127 282 177 399 5.70e-27 109
MsG0880047594.01.T01 AT2G46440 34.513 226 75 5 127 282 355 577 1.78e-26 109
MsG0880047594.01.T01 AT2G46450 49.351 77 32 1 202 278 464 533 7.99e-16 78.2
MsG0880047594.01.T01 AT2G46450 49.351 77 32 1 202 278 500 569 8.07e-16 78.2
MsG0880047594.01.T01 AT2G46450 49.351 77 32 1 202 278 500 569 8.07e-16 78.2
MsG0880047594.01.T01 AT2G46450 49.351 77 32 1 202 278 477 546 8.31e-16 78.2

Find 67 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACGCTCTCTAAGCTCTTT+TGG 0.222016 8:-88470255 None:intergenic
CAGAGAATACTTATATTGTT+CGG 0.346563 8:+88470977 MsG0880047594.01.T01:intron
TTTCAGCTCATCGGCGGTTA+AGG 0.369784 8:-88471218 None:intergenic
TGCCAGGCACTATAACCTTC+CGG 0.389913 8:-88468826 None:intergenic
GATCCTTCCTCCTTGTTGTT+CGG 0.392824 8:+88465504 MsG0880047594.01.T01:CDS
ATGAAAAGCATCTCATCAAC+TGG 0.410938 8:-88471009 None:intergenic
CTCTCATTTCCTCCAGCCTA+AGG 0.417185 8:-88470188 None:intergenic
TTTAAGCAAGCCTTGTCATC+TGG 0.423538 8:+88468921 MsG0880047594.01.T01:CDS
TGGAAGATTAGAACCAGATC+TGG 0.424177 8:-88471149 None:intergenic
CTTAAAATTCCATAATCAAA+AGG 0.433095 8:-88468904 None:intergenic
TAGAACCAGATCTGGGGTCC+AGG 0.433905 8:-88471141 None:intergenic
AGAGAATACTTATATTGTTC+GGG 0.441039 8:+88470978 MsG0880047594.01.T01:intron
TGGGCCCTGGACCCCAGATC+TGG 0.448919 8:+88471136 MsG0880047594.01.T01:CDS
TCAGTCCCTTACCCTTAGGC+TGG 0.460097 8:+88470176 MsG0880047594.01.T01:CDS
CACCGGAAGGTTATAGTGCC+TGG 0.464652 8:+88468824 MsG0880047594.01.T01:CDS
TTTCCTCCAGCCTAAGGGTA+AGG 0.471966 8:-88470182 None:intergenic
ACTCTCAACAATGGAGAACC+TGG 0.480377 8:+88471302 MsG0880047594.01.T01:CDS
CTAAGGAGGCTGAGTTCTGT+GGG 0.510214 8:+88471098 MsG0880047594.01.T01:CDS
CAACAGTTTCTCTCTCTATG+AGG 0.517286 8:+88465610 MsG0880047594.01.T01:CDS
TAGACGTCTTCACAGTAGAC+AGG 0.517455 8:+88471258 MsG0880047594.01.T01:CDS
GGAAGATTAGAACCAGATCT+GGG 0.521641 8:-88471148 None:intergenic
CTTGAATAAACAAGCAGCCC+AGG 0.523693 8:-88471320 None:intergenic
ATCTTCAGTCCCTTACCCTT+AGG 0.524427 8:+88470172 MsG0880047594.01.T01:CDS
CTAATCTTCCAACCTCTACT+CGG 0.532003 8:+88471161 MsG0880047594.01.T01:CDS
AATTATGAAGCTTCGTCAGA+AGG 0.541460 8:+88471370 MsG0880047594.01.T01:CDS
TTCCTCCAGCCTAAGGGTAA+GGG 0.548812 8:-88470181 None:intergenic
TGATTACAAATCACAGTACA+TGG 0.555003 8:+88466608 MsG0880047594.01.T01:CDS
GTCCCTTACCCTTAGGCTGG+AGG 0.561500 8:+88470179 MsG0880047594.01.T01:CDS
GGCAACAAATTTCAGCTCAT+CGG 0.562924 8:-88471227 None:intergenic
ACCTAAAAGAACTTTCTCGC+TGG 0.565973 8:-88466635 None:intergenic
CTTGAGAGTGTTACCACAGA+TGG 0.567620 8:+88471042 MsG0880047594.01.T01:CDS
TTCACAGTCCGAGTAGAGGT+TGG 0.569798 8:-88471169 None:intergenic
GCTTGTTTATTCAAGCAGCA+TGG 0.570519 8:+88471328 MsG0880047594.01.T01:CDS
CGCCTTCACAGTCCGAGTAG+AGG 0.572148 8:-88471173 None:intergenic
TCTAAGGAGGCTGAGTTCTG+TGG 0.572617 8:+88471097 MsG0880047594.01.T01:CDS
AACAAATTTCAGCTCATCGG+CGG 0.575197 8:-88471224 None:intergenic
TGGAGGAAATGAGAGTCAAA+AGG 0.578064 8:+88470196 MsG0880047594.01.T01:CDS
GTTACCACAGATGGTGGGAG+AGG 0.580428 8:+88471051 MsG0880047594.01.T01:CDS
AATACTTATATTGTTCGGGA+AGG 0.582365 8:+88470982 MsG0880047594.01.T01:CDS
GTCAAACATCTTTCAACAGT+AGG 0.587623 8:-88466580 None:intergenic
ATTCCATAATCAAAAGGTGG+AGG 0.588062 8:-88468898 None:intergenic
AGAACCAGATCTGGGGTCCA+GGG 0.590157 8:-88471140 None:intergenic
TCTCATTTCCTCCAGCCTAA+GGG 0.590500 8:-88470187 None:intergenic
GAGAGTGTTACCACAGATGG+TGG 0.593359 8:+88471045 MsG0880047594.01.T01:CDS
GTGAAGACGTCTAAACTGAC+TGG 0.596611 8:-88471248 None:intergenic
CACAGATGGTGGGAGAGGTG+TGG 0.598495 8:+88471056 MsG0880047594.01.T01:CDS
TACAAATCACAGTACATGGA+TGG 0.601736 8:+88466612 MsG0880047594.01.T01:CDS
GCACCGAACAACAAGGAGGA+AGG 0.608922 8:-88465507 None:intergenic
TCAACCGCACATATCTAAGG+AGG 0.613152 8:+88471084 MsG0880047594.01.T01:CDS
CACACCTCTCCCACCATCTG+TGG 0.613530 8:-88471055 None:intergenic
AACCTCTACTCGGACTGTGA+AGG 0.629479 8:+88471171 MsG0880047594.01.T01:CDS
CTCTCAACAATGGAGAACCT+GGG 0.633749 8:+88471303 MsG0880047594.01.T01:CDS
GCTTCGTCAGAAGGAAGAAG+CGG 0.637094 8:+88471379 MsG0880047594.01.T01:CDS
AAAGGCGTGATTCAGAACAA+TGG 0.640001 8:+88470214 MsG0880047594.01.T01:CDS
GGAGGCTGAGTTCTGTGGGG+AGG 0.641177 8:+88471102 MsG0880047594.01.T01:CDS
AAAATTCCATAATCAAAAGG+TGG 0.642418 8:-88468901 None:intergenic
TGAAATGATACCAGATGACA+AGG 0.644966 8:-88468931 None:intergenic
ACTGTGATTTGTAATCACTT+CGG 0.652558 8:-88466602 None:intergenic
TTGTGAGAACCAGCACCGGA+AGG 0.654758 8:+88468811 MsG0880047594.01.T01:intron
AAACTCTGCACCGAACAACA+AGG 0.661797 8:-88465514 None:intergenic
GACTGTGAAGGCGTTAACAG+AGG 0.662573 8:+88471183 MsG0880047594.01.T01:CDS
AGAGTGTTACCACAGATGGT+GGG 0.670648 8:+88471046 MsG0880047594.01.T01:CDS
TCAGCCTCCTTAGATATGTG+CGG 0.685788 8:-88471088 None:intergenic
GAAGATTAGAACCAGATCTG+GGG 0.716370 8:-88471147 None:intergenic
TGAAAGTGAAGTTGAAGTTG+CGG 0.721956 8:-88465589 None:intergenic
CTCTGCACCGAACAACAAGG+AGG 0.732981 8:-88465511 None:intergenic
TAAGGAGGCTGAGTTCTGTG+GGG 0.734382 8:+88471099 MsG0880047594.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTTTT+GGG + Chr8:88467666-88467685 MsG0880047594.01.T01:intron 0.0%
!!! TTTTTTTTTTTTTTTTTTTT+TGG + Chr8:88467666-88467685 MsG0880047594.01.T01:intron 0.0%
!! AAATAACAAACAAAAAAAAA+TGG - Chr8:88465802-88465821 None:intergenic 10.0%
!! TAAAATTAAAGCAATTAAAT+TGG - Chr8:88465656-88465675 None:intergenic 10.0%
!!! TCTTATAAATTTTTCTAATA+TGG + Chr8:88467885-88467904 MsG0880047594.01.T01:intron 10.0%
!!! TGTATGTATATTTTTATTTT+TGG + Chr8:88465898-88465917 MsG0880047594.01.T01:intron 10.0%
!!! TTTAATTGCTTTAATTTTAA+TGG + Chr8:88465657-88465676 MsG0880047594.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTTTTTGG+GGG + Chr8:88467669-88467688 MsG0880047594.01.T01:intron 10.0%
!! AAAATTATTGAGCTAAAAAT+AGG - Chr8:88467968-88467987 None:intergenic 15.0%
!! AAATTAATTACCTTAAATTC+TGG - Chr8:88469003-88469022 None:intergenic 15.0%
!! AGAATATAAAAAGAAAACAA+AGG - Chr8:88468306-88468325 None:intergenic 15.0%
!! ATAGTAGATTTATTACATAT+GGG + Chr8:88466331-88466350 MsG0880047594.01.T01:intron 15.0%
!! ATATATTATAAATGTTACTG+AGG + Chr8:88470123-88470142 MsG0880047594.01.T01:intron 15.0%
!! TAAATTATTTCATGATCATA+AGG + Chr8:88465866-88465885 MsG0880047594.01.T01:intron 15.0%
!! TAAGAAATATGATAAAATAG+AGG + Chr8:88469709-88469728 MsG0880047594.01.T01:intron 15.0%
!! TATAGTAGATTTATTACATA+TGG + Chr8:88466330-88466349 MsG0880047594.01.T01:intron 15.0%
!!! AATTCATTTACTTATTTTCA+TGG + Chr8:88470873-88470892 MsG0880047594.01.T01:intron 15.0%
!!! ATTTTCTACTGTAAAATTTT+TGG - Chr8:88470499-88470518 None:intergenic 15.0%
!!! CTTTTTCATTTTTTTTTTCT+AGG + Chr8:88466891-88466910 MsG0880047594.01.T01:intron 15.0%
!!! TTTTTTTTTTTTTTTTTGGG+GGG + Chr8:88467670-88467689 MsG0880047594.01.T01:intron 15.0%
!! AAATATAGCAATTGTGAATA+TGG - Chr8:88469774-88469793 None:intergenic 20.0%
!! AAGAATAAGTGCAATAAAAT+TGG + Chr8:88467746-88467765 MsG0880047594.01.T01:intron 20.0%
!! AATAAATCTACTATATAACG+TGG - Chr8:88466325-88466344 None:intergenic 20.0%
!! ACAAATAATCAATGAAATCA+CGG - Chr8:88469482-88469501 None:intergenic 20.0%
!! ATAAGAGTAAAAATTGTCTT+GGG - Chr8:88467156-88467175 None:intergenic 20.0%
!! ATGGTTTAGATGATTAATAT+TGG + Chr8:88465975-88465994 MsG0880047594.01.T01:intron 20.0%
!! CAAAATATCTTTACTGTTTA+TGG + Chr8:88468969-88468988 MsG0880047594.01.T01:intron 20.0%
!! CTTAAAATTCCATAATCAAA+AGG - Chr8:88468907-88468926 None:intergenic 20.0%
!! GAATAATTTAAAGAATGACA+TGG - Chr8:88466405-88466424 None:intergenic 20.0%
!! TAACTTCAGAAATTAACATT+AGG - Chr8:88469117-88469136 None:intergenic 20.0%
!! TAGAGATATCATGTATAAAT+AGG - Chr8:88469823-88469842 None:intergenic 20.0%
!! TGCAATACTATAAATATTGT+TGG + Chr8:88466508-88466527 MsG0880047594.01.T01:intron 20.0%
!! TTAAAATTACAGTAGCAATA+AGG - Chr8:88468259-88468278 None:intergenic 20.0%
!! TTTAAAAAAGGAATGAGAAA+GGG + Chr8:88467030-88467049 MsG0880047594.01.T01:intron 20.0%
!!! AACTTTAGGTTCATTTTTTA+TGG + Chr8:88466289-88466308 MsG0880047594.01.T01:intron 20.0%
!!! AGTATTGATAAATTAAACCA+TGG + Chr8:88466977-88466996 MsG0880047594.01.T01:intron 20.0%
!!! ATATTTAAGTTTCTGTGTTA+TGG + Chr8:88469981-88470000 MsG0880047594.01.T01:intron 20.0%
!!! ATTTGAAACTATTGAAATTG+GGG + Chr8:88467858-88467877 MsG0880047594.01.T01:intron 20.0%
!!! ATTTGCTTTTCAAATTCTTT+TGG + Chr8:88470686-88470705 MsG0880047594.01.T01:intron 20.0%
!!! GATTTGAAACTATTGAAATT+GGG + Chr8:88467857-88467876 MsG0880047594.01.T01:intron 20.0%
!!! TAAAATTTTTGGTCCTTTAT+CGG - Chr8:88470488-88470507 None:intergenic 20.0%
!!! TAATGTTAATTTCTGAAGTT+AGG + Chr8:88469116-88469135 MsG0880047594.01.T01:intron 20.0%
!!! TAGTATAAATGATGCTTTTT+GGG + Chr8:88468017-88468036 MsG0880047594.01.T01:intron 20.0%
!!! TGATTTGAAACTATTGAAAT+TGG + Chr8:88467856-88467875 MsG0880047594.01.T01:intron 20.0%
!!! TTAGTATAAATGATGCTTTT+TGG + Chr8:88468016-88468035 MsG0880047594.01.T01:intron 20.0%
!!! TTATTGCTACTGTAATTTTA+AGG + Chr8:88468258-88468277 MsG0880047594.01.T01:intron 20.0%
!!! TTCATTTTTTTTTTCTAGGT+GGG + Chr8:88466895-88466914 MsG0880047594.01.T01:intron 20.0%
!!! TTTCATTTTTTTTTTCTAGG+TGG + Chr8:88466894-88466913 MsG0880047594.01.T01:intron 20.0%
!!! TTTTAAAAAAGGAATGAGAA+AGG + Chr8:88467029-88467048 MsG0880047594.01.T01:intron 20.0%
!!! TTTTTTATAGACCATATCAA+TGG + Chr8:88469253-88469272 MsG0880047594.01.T01:intron 20.0%
!!! TTTTTTTGTGATTTGAGATT+AGG + Chr8:88465482-88465501 MsG0880047594.01.T01:CDS 20.0%
!!! TTTTTTTTTTTTTTTTGGGG+GGG + Chr8:88467671-88467690 MsG0880047594.01.T01:intron 20.0%
! AAAAAAAACACTTACATGAC+TGG - Chr8:88468540-88468559 None:intergenic 25.0%
! AAAATTCCATAATCAAAAGG+TGG - Chr8:88468904-88468923 None:intergenic 25.0%
! AAAGACCTAAAATACATTAG+TGG - Chr8:88468671-88468690 None:intergenic 25.0%
! AACACAGAAACTTAAATATC+AGG - Chr8:88469980-88469999 None:intergenic 25.0%
! AATATCTTTACTGTTTATGG+TGG + Chr8:88468972-88468991 MsG0880047594.01.T01:intron 25.0%
! AATCGTACAGTATTTACAAA+AGG - Chr8:88467528-88467547 None:intergenic 25.0%
! AGAGAATACTTATATTGTTC+GGG + Chr8:88470978-88470997 MsG0880047594.01.T01:intron 25.0%
! AGTAAAAAACTAGCAACTTT+AGG + Chr8:88466275-88466294 MsG0880047594.01.T01:intron 25.0%
! AGTTTCAAATCAAAGAAAAC+AGG - Chr8:88467848-88467867 None:intergenic 25.0%
! ATAAAAAGAAAACAAAGGCA+AGG - Chr8:88468301-88468320 None:intergenic 25.0%
! ATATCTTTACTGTTTATGGT+GGG + Chr8:88468973-88468992 MsG0880047594.01.T01:intron 25.0%
! CAAATAATCAATGAAATCAC+GGG - Chr8:88469481-88469500 None:intergenic 25.0%
! CAGAGAATACTTATATTGTT+CGG + Chr8:88470977-88470996 MsG0880047594.01.T01:intron 25.0%
! CATAAGAGTAAAAATTGTCT+TGG - Chr8:88467157-88467176 None:intergenic 25.0%
! GAAAATCAATCAGTGAAATA+AGG - Chr8:88470777-88470796 None:intergenic 25.0%
! GAAATATGATAAAATAGAGG+AGG + Chr8:88469712-88469731 MsG0880047594.01.T01:intron 25.0%
! GGAGAATATAATATCATACT+TGG + Chr8:88467767-88467786 MsG0880047594.01.T01:intron 25.0%
! GTATAAATAGGAGAATATGA+TGG - Chr8:88469811-88469830 None:intergenic 25.0%
! GTATTCTCTGTAAATAAACA+TGG - Chr8:88470967-88470986 None:intergenic 25.0%
! TAATATTCCTGTTTATGAAC+CGG + Chr8:88466822-88466841 MsG0880047594.01.T01:intron 25.0%
! TATACAACTCAAATAGAACA+AGG - Chr8:88468590-88468609 None:intergenic 25.0%
! TATCTCAGAACTTCTTATAA+AGG + Chr8:88469282-88469301 MsG0880047594.01.T01:intron 25.0%
! TATCTGCAAATAATCAGTAA+TGG - Chr8:88468696-88468715 None:intergenic 25.0%
! TTATAGTATTGCATTCTTCA+TGG - Chr8:88466501-88466520 None:intergenic 25.0%
!! AGTTTCTATGTCTAAAATAC+TGG + Chr8:88469185-88469204 MsG0880047594.01.T01:intron 25.0%
!! ATATAGTGTTTGAGATTTGT+TGG + Chr8:88470605-88470624 MsG0880047594.01.T01:intron 25.0%
!! CAAGACAATTTTTACTCTTA+TGG + Chr8:88467155-88467174 MsG0880047594.01.T01:intron 25.0%
!! TGATGCTTTTAGTAAACATT+CGG + Chr8:88466468-88466487 MsG0880047594.01.T01:intron 25.0%
!!! AATGTTTACTAAAAGCATCA+TGG - Chr8:88466468-88466487 None:intergenic 25.0%
!!! ACTTATTTTCATGGATTTGT+AGG + Chr8:88470882-88470901 MsG0880047594.01.T01:intron 25.0%
!!! AGTTAAGGTCATTGATTTTA+TGG + Chr8:88469162-88469181 MsG0880047594.01.T01:intron 25.0%
!!! TACTGTACGATTATTTTTCT+TGG + Chr8:88467536-88467555 MsG0880047594.01.T01:intron 25.0%
!!! TATTTTTATACTCATGCAGA+AGG - Chr8:88470588-88470607 None:intergenic 25.0%
!!! TTTTTTTTTTTTTTTGGGGG+GGG + Chr8:88467672-88467691 MsG0880047594.01.T01:intron 25.0%
AAATTAATTGGTCGATCACT+TGG + Chr8:88467066-88467085 MsG0880047594.01.T01:intron 30.0%
AACAATAGTGAAGTAACTAC+CGG - Chr8:88466844-88466863 None:intergenic 30.0%
AAGATAACAGAGAACATTGT+TGG - Chr8:88467581-88467600 None:intergenic 30.0%
AATACTTATATTGTTCGGGA+AGG + Chr8:88470982-88471001 MsG0880047594.01.T01:CDS 30.0%
AATGACCTTAACTCAATTGA+AGG - Chr8:88469155-88469174 None:intergenic 30.0%
AATGATGAATTACACTGTCT+GGG + Chr8:88467250-88467269 MsG0880047594.01.T01:intron 30.0%
AATGTGTGTTTGGAAATCAT+GGG + Chr8:88466126-88466145 MsG0880047594.01.T01:intron 30.0%
ACAGGAAGATAAAAAAACAG+TGG - Chr8:88467226-88467245 None:intergenic 30.0%
ACGTATCGTAAAAGTAAGAA+TGG + Chr8:88469670-88469689 MsG0880047594.01.T01:intron 30.0%
ACTGATTATTTGCAGATAGT+TGG + Chr8:88468698-88468717 MsG0880047594.01.T01:intron 30.0%
ATGGTATTCTCTATTGTGAA+GGG - Chr8:88469755-88469774 None:intergenic 30.0%
CCAAAAAAAAAATGCTGTGA+TGG + Chr8:88466236-88466255 MsG0880047594.01.T01:intron 30.0%
CTTATCCTTCAATTGAGTTA+AGG + Chr8:88469147-88469166 MsG0880047594.01.T01:intron 30.0%
CTTCATAGTTGAGAACTATA+TGG + Chr8:88470009-88470028 MsG0880047594.01.T01:intron 30.0%
GAAGTAAATGAAATAGGTTG+TGG - Chr8:88469508-88469527 None:intergenic 30.0%
GACATTGCAACGAAATATAT+TGG - Chr8:88466663-88466682 None:intergenic 30.0%
GATTAAGTTAATCTACCAGA+GGG - Chr8:88470824-88470843 None:intergenic 30.0%
GTATGATCAATATAAGTGGT+TGG + Chr8:88470284-88470303 MsG0880047594.01.T01:intron 30.0%
GTGCTCATGTAAATAACATT+TGG - Chr8:88470042-88470061 None:intergenic 30.0%
TAAATTAAACCATGGAGTCA+TGG + Chr8:88466985-88467004 MsG0880047594.01.T01:intron 30.0%
TACGTGTTAGTCAATAGTAA+CGG + Chr8:88465948-88465967 MsG0880047594.01.T01:intron 30.0%
TATAGACCATATCAATGGTA+GGG + Chr8:88469258-88469277 MsG0880047594.01.T01:intron 30.0%
TATATTTCGTTGCAATGTCA+TGG + Chr8:88466664-88466683 MsG0880047594.01.T01:intron 30.0%
TATCTTTACTGTTTATGGTG+GGG + Chr8:88468974-88468993 MsG0880047594.01.T01:intron 30.0%
TATGCAACAAGATTGTGTAT+TGG - Chr8:88467825-88467844 None:intergenic 30.0%
TATGGTATTCTCTATTGTGA+AGG - Chr8:88469756-88469775 None:intergenic 30.0%
TATTCCTAGATTTCTTCGAA+TGG + Chr8:88468421-88468440 MsG0880047594.01.T01:intron 30.0%
TCTGAAGGACTGAAATTAAT+TGG + Chr8:88467054-88467073 MsG0880047594.01.T01:intron 30.0%
TCTTGTAATCAGATTGTTGT+TGG + Chr8:88468323-88468342 MsG0880047594.01.T01:intron 30.0%
TGAAGATATGTCTGCAATAA+CGG - Chr8:88470159-88470178 None:intergenic 30.0%
TGACTATTATTGCCAACTTT+CGG - Chr8:88467282-88467301 None:intergenic 30.0%
TGAGAATATGAGTATGTGTT+AGG - Chr8:88469957-88469976 None:intergenic 30.0%
TGATTAAGTTAATCTACCAG+AGG - Chr8:88470825-88470844 None:intergenic 30.0%
TGATTACAAATCACAGTACA+TGG + Chr8:88466608-88466627 MsG0880047594.01.T01:CDS 30.0%
TGCAGTGAAGTAAATGAAAT+AGG - Chr8:88469514-88469533 None:intergenic 30.0%
TTACTTCACTATTGTTTCAG+AGG + Chr8:88466848-88466867 MsG0880047594.01.T01:intron 30.0%
TTAGTAACAATAGGATAACG+AGG - Chr8:88469865-88469884 None:intergenic 30.0%
TTATAGACCATATCAATGGT+AGG + Chr8:88469257-88469276 MsG0880047594.01.T01:intron 30.0%
TTTGACATGTTAGTGAATGT+CGG - Chr8:88468172-88468191 None:intergenic 30.0%
TTTGTTAGGATATGGGATAA+GGG - Chr8:88469891-88469910 None:intergenic 30.0%
! AAAAAAAATGCTGTGATGGA+AGG + Chr8:88466240-88466259 MsG0880047594.01.T01:intron 30.0%
! ACTGTGATTTGTAATCACTT+CGG - Chr8:88466605-88466624 None:intergenic 30.0%
! ATATACTGAACCCTTATTTC+GGG + Chr8:88468048-88468067 MsG0880047594.01.T01:intron 30.0%
! GATATACTGAACCCTTATTT+CGG + Chr8:88468047-88468066 MsG0880047594.01.T01:intron 30.0%
! GCTCAATAATTTTTGTTAGC+TGG + Chr8:88467975-88467994 MsG0880047594.01.T01:intron 30.0%
! TGCTTTCTATTTGCTAAACA+TGG + Chr8:88467324-88467343 MsG0880047594.01.T01:intron 30.0%
! TGTAATTCATCATTGATGAC+AGG - Chr8:88467244-88467263 None:intergenic 30.0%
!! ACCTCTAGGTCTTTTAAAAA+AGG + Chr8:88467018-88467037 MsG0880047594.01.T01:intron 30.0%
!! ATATTGTTTTGTTCATCTGC+AGG + Chr8:88466543-88466562 MsG0880047594.01.T01:intron 30.0%
!! CTCTTAAGTTCTGAAGTTAA+TGG - Chr8:88468449-88468468 None:intergenic 30.0%
!! TAGCAAATAGAAAGCATCAA+TGG - Chr8:88467320-88467339 None:intergenic 30.0%
!! TATAAATGATGCTTTTTGGG+TGG + Chr8:88468020-88468039 MsG0880047594.01.T01:intron 30.0%
!! TGAGTTGATGAAATAGTTCA+TGG - Chr8:88470663-88470682 None:intergenic 30.0%
!! TTCGTTTTTACTCTCAACAA+TGG + Chr8:88471293-88471312 MsG0880047594.01.T01:CDS 30.0%
!!! ACTTGACTTTTTTCCGATAA+AGG + Chr8:88470472-88470491 MsG0880047594.01.T01:intron 30.0%
!!! CCATCACAGCATTTTTTTTT+TGG - Chr8:88466239-88466258 None:intergenic 30.0%
!!! TCCTTTTTTAAAAGACCTAG+AGG - Chr8:88467022-88467041 None:intergenic 30.0%
!!! TTTTTTTTTTTTTTGGGGGG+GGG + Chr8:88467673-88467692 MsG0880047594.01.T01:intron 30.0%
AAATTCGAAATTGATCCCTC+TGG + Chr8:88470806-88470825 MsG0880047594.01.T01:intron 35.0%
AAGCAAGATAATGAACAGCA+AGG - Chr8:88468398-88468417 None:intergenic 35.0%
AAGTCCAATACACTCTTATC+TGG - Chr8:88469046-88469065 None:intergenic 35.0%
AATTATGAAGCTTCGTCAGA+AGG + Chr8:88471370-88471389 MsG0880047594.01.T01:CDS 35.0%
AGATAACCCTACCATTGATA+TGG - Chr8:88469267-88469286 None:intergenic 35.0%
AGGATAACGAGGAGTTAAAT+AGG - Chr8:88469854-88469873 None:intergenic 35.0%
AGTCAATAGTAACGGCAATA+TGG + Chr8:88465956-88465975 MsG0880047594.01.T01:intron 35.0%
ATAATCAATGAAATCACGGG+AGG - Chr8:88469478-88469497 None:intergenic 35.0%
ATATCTCTTCGAAGATCCTT+TGG - Chr8:88470350-88470369 None:intergenic 35.0%
ATCTTTACTGTTTATGGTGG+GGG + Chr8:88468975-88468994 MsG0880047594.01.T01:intron 35.0%
ATTCCATAATCAAAAGGTGG+AGG - Chr8:88468901-88468920 None:intergenic 35.0%
CAAATAGAACAAGGAAGCAA+AGG - Chr8:88468581-88468600 None:intergenic 35.0%
CAATGATGAATTACACTGTC+TGG + Chr8:88467249-88467268 MsG0880047594.01.T01:intron 35.0%
CACTTATTCTTTCTTCTCTC+GGG - Chr8:88467737-88467756 None:intergenic 35.0%
CGTTGAATTGAATGTGTGTT+TGG + Chr8:88466116-88466135 MsG0880047594.01.T01:intron 35.0%
CTTCAAACTAGCACATATCT+GGG + Chr8:88469551-88469570 MsG0880047594.01.T01:intron 35.0%
GAATGTGTGTTTGGAAATCA+TGG + Chr8:88466125-88466144 MsG0880047594.01.T01:intron 35.0%
GATGTCAGAGTTACAAAATC+TGG + Chr8:88466950-88466969 MsG0880047594.01.T01:intron 35.0%
GATTGTTAGGATGAGATAAG+AGG - Chr8:88469917-88469936 None:intergenic 35.0%
GCACTTATTCTTTCTTCTCT+CGG - Chr8:88467738-88467757 None:intergenic 35.0%
GCAGCGAAAATATTATCTCA+TGG - Chr8:88467617-88467636 None:intergenic 35.0%
GTCAAACATCTTTCAACAGT+AGG - Chr8:88466583-88466602 None:intergenic 35.0%
TAAGGGGAGTTAGTAACAAT+AGG - Chr8:88469874-88469893 None:intergenic 35.0%
TAATCAATGAAATCACGGGA+GGG - Chr8:88469477-88469496 None:intergenic 35.0%
TACAAATCACAGTACATGGA+TGG + Chr8:88466612-88466631 MsG0880047594.01.T01:CDS 35.0%
TACAGAGCAAAGTAATGAGT+GGG - Chr8:88469087-88469106 None:intergenic 35.0%
TATTAAGCGTCATCTCTGTT+TGG + Chr8:88470367-88470386 MsG0880047594.01.T01:intron 35.0%
TCATCCATACTCTCAAATAG+TGG - Chr8:88470910-88470929 None:intergenic 35.0%
TCTCTTACGTGTGACTAAAA+AGG + Chr8:88470449-88470468 MsG0880047594.01.T01:intron 35.0%
TCTTTCCTATGGGAATAAGA+GGG + Chr8:88466208-88466227 MsG0880047594.01.T01:intron 35.0%
TGAAAGTGAAGTTGAAGTTG+CGG - Chr8:88465592-88465611 None:intergenic 35.0%
TGAAATGATACCAGATGACA+AGG - Chr8:88468934-88468953 None:intergenic 35.0%
TGGTATTCTCTATTGTGAAG+GGG - Chr8:88469754-88469773 None:intergenic 35.0%
TTACAGAGCAAAGTAATGAG+TGG - Chr8:88469088-88469107 None:intergenic 35.0%
TTCAAACTAGCACATATCTG+GGG + Chr8:88469552-88469571 MsG0880047594.01.T01:intron 35.0%
TTGGAGAGAGAAGAAGAAAA+CGG - Chr8:88465637-88465656 None:intergenic 35.0%
TTGTTAGGATATGGGATAAG+GGG - Chr8:88469890-88469909 None:intergenic 35.0%
! CTCTGCCACTAATGTATTTT+AGG + Chr8:88468663-88468682 MsG0880047594.01.T01:intron 35.0%
! CTTTGTTTGTTTCTCTCTCA+GGG - Chr8:88466029-88466048 None:intergenic 35.0%
! GAGATAAGAGGAAGTTTGTT+AGG - Chr8:88469905-88469924 None:intergenic 35.0%
! GTTTGTTAGGATATGGGATA+AGG - Chr8:88469892-88469911 None:intergenic 35.0%
! TCTCTCTTAGATTAGTTACC+TGG + Chr8:88470636-88470655 MsG0880047594.01.T01:intron 35.0%
! TCTTTGTTTGTTTCTCTCTC+AGG - Chr8:88466030-88466049 None:intergenic 35.0%
! TTAACAAGAAAAGCACAGTG+AGG - Chr8:88465723-88465742 None:intergenic 35.0%
! TTGTCCAGATAAGAGTGTAT+TGG + Chr8:88469039-88469058 MsG0880047594.01.T01:intron 35.0%
! TTTAGTTCAGAGTCTACCAA+AGG + Chr8:88470331-88470350 MsG0880047594.01.T01:intron 35.0%
! TTTTCAACCGCACATATCTA+AGG + Chr8:88471081-88471100 MsG0880047594.01.T01:CDS 35.0%
! TTTTTCTAGGTGGGATTTCT+TGG + Chr8:88466904-88466923 MsG0880047594.01.T01:intron 35.0%
!! AGAGGAAGTTTGTTAGGATA+TGG - Chr8:88469899-88469918 None:intergenic 35.0%
!! ATGAAAAGCATCTCATCAAC+TGG - Chr8:88471012-88471031 None:intergenic 35.0%
!! GAGGAAGTTTGTTAGGATAT+GGG - Chr8:88469898-88469917 None:intergenic 35.0%
!! TACATATGGGTTTTAACACC+TGG + Chr8:88466344-88466363 MsG0880047594.01.T01:intron 35.0%
!! TCAGACACTTTAAGATCTTC+TGG - Chr8:88467117-88467136 None:intergenic 35.0%
!! TGCTCAAGATTACTTTTACC+AGG - Chr8:88466365-88466384 None:intergenic 35.0%
!! TGGTGATTTGCTGTATCATA+AGG + Chr8:88465918-88465937 MsG0880047594.01.T01:intron 35.0%
!!! AGTTCTAAAGCCTGCATTTT+TGG + Chr8:88469310-88469329 MsG0880047594.01.T01:intron 35.0%
!!! ATGCATTTTTTCCGTGTTTG+TGG + Chr8:88467198-88467217 MsG0880047594.01.T01:intron 35.0%
!!! TCTCTCTCAGGGTTTTATTT+GGG - Chr8:88466018-88466037 None:intergenic 35.0%
!!! TGAGCATGAGTTCTAGTTTT+GGG + Chr8:88466379-88466398 MsG0880047594.01.T01:intron 35.0%
!!! TTCTCTCTCAGGGTTTTATT+TGG - Chr8:88466019-88466038 None:intergenic 35.0%
!!! TTGAGCATGAGTTCTAGTTT+TGG + Chr8:88466378-88466397 MsG0880047594.01.T01:intron 35.0%
!!! TTTTGGCTTGTTTCACGTTT+TGG + Chr8:88469327-88469346 MsG0880047594.01.T01:intron 35.0%
!!! TTTTTTTTTTTTTGGGGGGG+GGG + Chr8:88467674-88467693 MsG0880047594.01.T01:intron 35.0%
AAACAGTGGATCCACAAACA+CGG - Chr8:88467212-88467231 None:intergenic 40.0%
AACAAATTTCAGCTCATCGG+CGG - Chr8:88471227-88471246 None:intergenic 40.0%
AAGACAGTGAGGAGATTGTT+AGG - Chr8:88469930-88469949 None:intergenic 40.0%
AATAGAGGAGGATCTCTCTA+AGG + Chr8:88469724-88469743 MsG0880047594.01.T01:intron 40.0%
AATCAATGAAATCACGGGAG+GGG - Chr8:88469476-88469495 None:intergenic 40.0%
ACCTAAAAGAACTTTCTCGC+TGG - Chr8:88466638-88466657 None:intergenic 40.0%
ACTGCACAACAACATCAATG+TGG - Chr8:88470541-88470560 None:intergenic 40.0%
AGAGCAAAGCGCATATTGTA+GGG - Chr8:88469436-88469455 None:intergenic 40.0%
AGTGTTTGCCTATTTGTCTG+TGG - Chr8:88467798-88467817 None:intergenic 40.0%
AGTTGAGAACTATATGGCTG+TGG + Chr8:88470015-88470034 MsG0880047594.01.T01:intron 40.0%
ATAGAGGAGGATCTCTCTAA+GGG + Chr8:88469725-88469744 MsG0880047594.01.T01:intron 40.0%
ATGCCTTTCTCTGATCTAGA+TGG + Chr8:88466795-88466814 MsG0880047594.01.T01:intron 40.0%
CAACAGTTTCTCTCTCTATG+AGG + Chr8:88465610-88465629 MsG0880047594.01.T01:CDS 40.0%
CAATAATAGTCACCACCTTG+AGG + Chr8:88467290-88467309 MsG0880047594.01.T01:intron 40.0%
CGAGGAGTTAAATAGGATGT+TGG - Chr8:88469847-88469866 None:intergenic 40.0%
CTAATCTTCCAACCTCTACT+CGG + Chr8:88471161-88471180 MsG0880047594.01.T01:CDS 40.0%
CTCTTTCCTATGGGAATAAG+AGG + Chr8:88466207-88466226 MsG0880047594.01.T01:intron 40.0%
GAAGATTAGAACCAGATCTG+GGG - Chr8:88471150-88471169 None:intergenic 40.0%
GATGAAATAGTTCATGGACC+AGG - Chr8:88470657-88470676 None:intergenic 40.0%
GCTTCAAACTAGCACATATC+TGG + Chr8:88469550-88469569 MsG0880047594.01.T01:intron 40.0%
GCTTGTTTATTCAAGCAGCA+TGG + Chr8:88471328-88471347 MsG0880047594.01.T01:CDS 40.0%
GGAAGATTAGAACCAGATCT+GGG - Chr8:88471151-88471170 None:intergenic 40.0%
GGCAACAAATTTCAGCTCAT+CGG - Chr8:88471230-88471249 None:intergenic 40.0%
GGCGGTATGATCAATATAAG+TGG + Chr8:88470280-88470299 MsG0880047594.01.T01:intron 40.0%
GGTACCATTCGAAGAAATCT+AGG - Chr8:88468428-88468447 None:intergenic 40.0%
GGTTCCACTATTTGAGAGTA+TGG + Chr8:88470903-88470922 MsG0880047594.01.T01:intron 40.0%
GTGAAACAAGCCAAAAATGC+AGG - Chr8:88469323-88469342 None:intergenic 40.0%
GTTGTTGGAGATTTCTTCAG+AGG + Chr8:88468338-88468357 MsG0880047594.01.T01:intron 40.0%
TATCAGGGTCTCTTTCCTAT+GGG + Chr8:88466198-88466217 MsG0880047594.01.T01:intron 40.0%
TCAATAGCACTTGCCATATC+AGG + Chr8:88469586-88469605 MsG0880047594.01.T01:intron 40.0%
TCAGAACTTAAGAGAACAGC+TGG + Chr8:88468455-88468474 MsG0880047594.01.T01:intron 40.0%
TCCTATGAGTAAGAAGCAAG+AGG - Chr8:88467643-88467662 None:intergenic 40.0%
TCCTCTTGCTTCTTACTCAT+AGG + Chr8:88467639-88467658 MsG0880047594.01.T01:intron 40.0%
TGATGTACTAGCAACAAAGC+AGG + Chr8:88468372-88468391 MsG0880047594.01.T01:intron 40.0%
TGCCTTTCTCTGATCTAGAT+GGG + Chr8:88466796-88466815 MsG0880047594.01.T01:intron 40.0%
TGGAAGATTAGAACCAGATC+TGG - Chr8:88471152-88471171 None:intergenic 40.0%
TGGAGGAAATGAGAGTCAAA+AGG + Chr8:88470196-88470215 MsG0880047594.01.T01:CDS 40.0%
TGGTTTCAGTCTCTCACATA+TGG - Chr8:88470947-88470966 None:intergenic 40.0%
TGTAACCCTCTTATTCCCAT+AGG - Chr8:88466216-88466235 None:intergenic 40.0%
TGTTAGGACATAAGACAGTG+AGG - Chr8:88469941-88469960 None:intergenic 40.0%
TTACAATTGTTGCCCAACTC+TGG + Chr8:88466173-88466192 MsG0880047594.01.T01:intron 40.0%
TTACGATACGTCAAGCTCAA+TGG - Chr8:88469661-88469680 None:intergenic 40.0%
TTATCAGGGTCTCTTTCCTA+TGG + Chr8:88466197-88466216 MsG0880047594.01.T01:intron 40.0%
! AAAGGCGTGATTCAGAACAA+TGG + Chr8:88470214-88470233 MsG0880047594.01.T01:CDS 40.0%
! ACAGAAGTCTTTTCAACCTG+TGG - Chr8:88467490-88467509 None:intergenic 40.0%
! ATGAGATGCTTTTCATACGC+GGG + Chr8:88471016-88471035 MsG0880047594.01.T01:CDS 40.0%
! CAGTGCTCTATGTGACTTTT+TGG + Chr8:88470721-88470740 MsG0880047594.01.T01:intron 40.0%
! GATGAGATGCTTTTCATACG+CGG + Chr8:88471015-88471034 MsG0880047594.01.T01:CDS 40.0%
! TTTAAGCAAGCCTTGTCATC+TGG + Chr8:88468921-88468940 MsG0880047594.01.T01:CDS 40.0%
! TTTTGTTGCACCCATTGTCA+CGG - Chr8:88468781-88468800 None:intergenic 40.0%
!! ATCTCTGTTTGGCTTTAGTG+AGG + Chr8:88470378-88470397 MsG0880047594.01.T01:intron 40.0%
!! CTAAAAGCATCATGGTAGAG+AGG - Chr8:88466460-88466479 None:intergenic 40.0%
!! GATCCTCCACCTTTTGATTA+TGG + Chr8:88468895-88468914 MsG0880047594.01.T01:CDS 40.0%
!! GTAACTACCGGTTCATAAAC+AGG - Chr8:88466832-88466851 None:intergenic 40.0%
!! TGCAGATAGTTGGTGCTTTT+TGG + Chr8:88468708-88468727 MsG0880047594.01.T01:intron 40.0%
!!! ACACGTAAGAGAGAGTGTTT+TGG - Chr8:88470441-88470460 None:intergenic 40.0%
!!! AGCTTTGCTTTTGTTTTGCC+AGG - Chr8:88468845-88468864 None:intergenic 40.0%
!!! ATGATGCTTTTTGGGTGGAT+TGG + Chr8:88468025-88468044 MsG0880047594.01.T01:intron 40.0%
!!! TTTTTTTTTTTTGGGGGGGG+GGG + Chr8:88467675-88467694 MsG0880047594.01.T01:intron 40.0%
AAACTAGCACATATCTGGGG+AGG + Chr8:88469555-88469574 MsG0880047594.01.T01:intron 45.0%
AAACTCTGCACCGAACAACA+AGG - Chr8:88465517-88465536 None:intergenic 45.0%
AAGCGCATATTGTAGGGATC+TGG - Chr8:88469430-88469449 None:intergenic 45.0%
AATTGGTCGATCACTTGGAC+TGG + Chr8:88467071-88467090 MsG0880047594.01.T01:intron 45.0%
ACTCTCAACAATGGAGAACC+TGG + Chr8:88471302-88471321 MsG0880047594.01.T01:CDS 45.0%
AGAATGCTTGCCGTGACAAT+GGG + Chr8:88468768-88468787 MsG0880047594.01.T01:intron 45.0%
AGACCCTGATAATCCAGAGT+TGG - Chr8:88466189-88466208 None:intergenic 45.0%
AGTGGGTGATTATGCACCAA+AGG - Chr8:88469070-88469089 None:intergenic 45.0%
ATCAATGAAATCACGGGAGG+GGG - Chr8:88469475-88469494 None:intergenic 45.0%
ATCTTCAGTCCCTTACCCTT+AGG + Chr8:88470172-88470191 MsG0880047594.01.T01:CDS 45.0%
ATTGGTCGATCACTTGGACT+GGG + Chr8:88467072-88467091 MsG0880047594.01.T01:intron 45.0%
CAATGTAAGCCGTGCGAAAT+TGG - Chr8:88467354-88467373 None:intergenic 45.0%
CCTTGTCTCTCCCGAAATAA+GGG - Chr8:88468061-88468080 None:intergenic 45.0%
CTCCATCATCTCGTGTCTTT+GGG + Chr8:88467374-88467393 MsG0880047594.01.T01:intron 45.0%
CTCTCAACAATGGAGAACCT+GGG + Chr8:88471303-88471322 MsG0880047594.01.T01:CDS 45.0%
CTTGAATAAACAAGCAGCCC+AGG - Chr8:88471323-88471342 None:intergenic 45.0%
GAAGAGGATGAGACCTGATA+TGG - Chr8:88469602-88469621 None:intergenic 45.0%
GACCCATCTAGATCAGAGAA+AGG - Chr8:88466801-88466820 None:intergenic 45.0%
GACCCTGATAATCCAGAGTT+GGG - Chr8:88466188-88466207 None:intergenic 45.0%
GAGAGCAAAGCGCATATTGT+AGG - Chr8:88469437-88469456 None:intergenic 45.0%
GAGTGTATTGGACTTCCCTT+TGG + Chr8:88469051-88469070 MsG0880047594.01.T01:intron 45.0%
GGAATGAGAAAGGGATCTGA+AGG + Chr8:88467039-88467058 MsG0880047594.01.T01:intron 45.0%
GTAGAGAGGCTGAAACAACT+TGG - Chr8:88466446-88466465 None:intergenic 45.0%
GTGAAGACGTCTAAACTGAC+TGG - Chr8:88471251-88471270 None:intergenic 45.0%
GTGAGGAGAATCAATAGCGA+CGG - Chr8:88465706-88465725 None:intergenic 45.0%
GTGGGTGATTATGCACCAAA+GGG - Chr8:88469069-88469088 None:intergenic 45.0%
TAGACGTCTTCACAGTAGAC+AGG + Chr8:88471258-88471277 MsG0880047594.01.T01:CDS 45.0%
TATAAGTGGTTGGCAACACG+TGG + Chr8:88470294-88470313 MsG0880047594.01.T01:intron 45.0%
TCAACCGCACATATCTAAGG+AGG + Chr8:88471084-88471103 MsG0880047594.01.T01:CDS 45.0%
TCAGCCTCCTTAGATATGTG+CGG - Chr8:88471091-88471110 None:intergenic 45.0%
TCCTTGTCTCTCCCGAAATA+AGG - Chr8:88468062-88468081 None:intergenic 45.0%
TCTCATTTCCTCCAGCCTAA+GGG - Chr8:88470190-88470209 None:intergenic 45.0%
TCTGGGTATAGACCGAAAGT+TGG + Chr8:88467267-88467286 MsG0880047594.01.T01:intron 45.0%
TGCCCAACTCTGGATTATCA+GGG + Chr8:88466183-88466202 MsG0880047594.01.T01:intron 45.0%
TGGCAATGCCACAGACAAAT+AGG + Chr8:88467787-88467806 MsG0880047594.01.T01:intron 45.0%
TGTATTGTGAGAACCAGCAC+CGG + Chr8:88468807-88468826 MsG0880047594.01.T01:intron 45.0%
TGTCTTTGCCGAAACTGCAT+GGG + Chr8:88468478-88468497 MsG0880047594.01.T01:intron 45.0%
TTACTTCACTGCAGTACCCT+TGG + Chr8:88469521-88469540 MsG0880047594.01.T01:intron 45.0%
TTGAACGCAATGACTCATGC+TGG + Chr8:88468744-88468763 MsG0880047594.01.T01:intron 45.0%
TTGCCCAACTCTGGATTATC+AGG + Chr8:88466182-88466201 MsG0880047594.01.T01:intron 45.0%
! ACACGCTCTCTAAGCTCTTT+TGG - Chr8:88470258-88470277 None:intergenic 45.0%
! AGAGTGTTACCACAGATGGT+GGG + Chr8:88471046-88471065 MsG0880047594.01.T01:CDS 45.0%
! ATATCGTCGCAAGTATCGCT+TGG - Chr8:88467434-88467453 None:intergenic 45.0%
! CACGCTCTCTAAGCTCTTTT+GGG - Chr8:88470257-88470276 None:intergenic 45.0%
! GCCAGCGAGAAAGTTCTTTT+AGG + Chr8:88466634-88466653 MsG0880047594.01.T01:CDS 45.0%
! GTCTTTTCAACCTGTGGTAC+TGG - Chr8:88467484-88467503 None:intergenic 45.0%
! TGGGGAGGAGCTTTTAACAT+GGG + Chr8:88471117-88471136 MsG0880047594.01.T01:CDS 45.0%
!! CTGTTTGGCTTTAGTGAGGA+GGG + Chr8:88470382-88470401 MsG0880047594.01.T01:intron 45.0%
!! CTTGAGAGTGTTACCACAGA+TGG + Chr8:88471042-88471061 MsG0880047594.01.T01:CDS 45.0%
!! GATCCTTCCTCCTTGTTGTT+CGG + Chr8:88465504-88465523 MsG0880047594.01.T01:CDS 45.0%
!! TCTGTTTGGCTTTAGTGAGG+AGG + Chr8:88470381-88470400 MsG0880047594.01.T01:intron 45.0%
!!! TTTTTTTTTTTGGGGGGGGG+GGG + Chr8:88467676-88467695 MsG0880047594.01.T01:intron 45.0%
!!! TTTTAAAAAATAATTTTGAA+GGG + Chr8:88465821-88465840 MsG0880047594.01.T01:intron 5.0%
!!! TTTTTAAAAAATAATTTTGA+AGG + Chr8:88465820-88465839 MsG0880047594.01.T01:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTTG+GGG + Chr8:88467668-88467687 MsG0880047594.01.T01:intron 5.0%
AACCTCTACTCGGACTGTGA+AGG + Chr8:88471171-88471190 MsG0880047594.01.T01:CDS 50.0%
AGCATCAATGGCTGTCCTCA+AGG - Chr8:88467308-88467327 None:intergenic 50.0%
AGGAGAATCAATAGCGACGG+TGG - Chr8:88465703-88465722 None:intergenic 50.0%
ATCAATGGCTGTCCTCAAGG+TGG - Chr8:88467305-88467324 None:intergenic 50.0%
ATCATCTCGTGTCTTTGGGC+GGG + Chr8:88467378-88467397 MsG0880047594.01.T01:intron 50.0%
ATCCTCTTCGCGCTTCTGAT+TGG + Chr8:88469613-88469632 MsG0880047594.01.T01:intron 50.0%
ATCTGTGTTGCCAGTACCAC+AGG + Chr8:88467471-88467490 MsG0880047594.01.T01:intron 50.0%
ATGGAAGCAGCACAACCTCT+AGG + Chr8:88467004-88467023 MsG0880047594.01.T01:intron 50.0%
CAGAATGCTTGCCGTGACAA+TGG + Chr8:88468767-88468786 MsG0880047594.01.T01:intron 50.0%
CATCATCTCGTGTCTTTGGG+CGG + Chr8:88467377-88467396 MsG0880047594.01.T01:intron 50.0%
CATGGCTCTCCAATTTCGCA+CGG + Chr8:88467342-88467361 MsG0880047594.01.T01:intron 50.0%
CTAAGGAGGCTGAGTTCTGT+GGG + Chr8:88471098-88471117 MsG0880047594.01.T01:CDS 50.0%
CTCTCATTTCCTCCAGCCTA+AGG - Chr8:88470191-88470210 None:intergenic 50.0%
GAATCAATAGCGACGGTGGA+CGG - Chr8:88465699-88465718 None:intergenic 50.0%
GCTCCATCATCTCGTGTCTT+TGG + Chr8:88467373-88467392 MsG0880047594.01.T01:intron 50.0%
GCTTCGTCAGAAGGAAGAAG+CGG + Chr8:88471379-88471398 MsG0880047594.01.T01:CDS 50.0%
GCTTCTGATTGGCAACATGC+AGG + Chr8:88469624-88469643 MsG0880047594.01.T01:intron 50.0%
GGGCGAGCTTGTGATAGATT+CGG + Chr8:88467399-88467418 MsG0880047594.01.T01:intron 50.0%
GTGTCTTTGCCGAAACTGCA+TGG + Chr8:88468477-88468496 MsG0880047594.01.T01:intron 50.0%
TAAGGAGGCTGAGTTCTGTG+GGG + Chr8:88471099-88471118 MsG0880047594.01.T01:CDS 50.0%
TCAATGAAATCACGGGAGGG+GGG - Chr8:88469474-88469493 None:intergenic 50.0%
TCTAAGGAGGCTGAGTTCTG+TGG + Chr8:88471097-88471116 MsG0880047594.01.T01:CDS 50.0%
TGCCAGGCACTATAACCTTC+CGG - Chr8:88468829-88468848 None:intergenic 50.0%
TTCACAGTCCGAGTAGAGGT+TGG - Chr8:88471172-88471191 None:intergenic 50.0%
TTCCTCCAGCCTAAGGGTAA+GGG - Chr8:88470184-88470203 None:intergenic 50.0%
TTGGTCGATCACTTGGACTG+GGG + Chr8:88467073-88467092 MsG0880047594.01.T01:intron 50.0%
TTTCAGCTCATCGGCGGTTA+AGG - Chr8:88471221-88471240 None:intergenic 50.0%
TTTCCTCCAGCCTAAGGGTA+AGG - Chr8:88470185-88470204 None:intergenic 50.0%
! AAGAGCTTAGAGAGCGTGTG+AGG + Chr8:88470259-88470278 MsG0880047594.01.T01:intron 50.0%
! AGTTTGAAGCCCCTGACCAA+GGG - Chr8:88469540-88469559 None:intergenic 50.0%
! CCCTTATTTCGGGAGAGACA+AGG + Chr8:88468058-88468077 MsG0880047594.01.T01:intron 50.0%
! GTGGGGAGGAGCTTTTAACA+TGG + Chr8:88471116-88471135 MsG0880047594.01.T01:CDS 50.0%
! TAGTTTGAAGCCCCTGACCA+AGG - Chr8:88469541-88469560 None:intergenic 50.0%
!! ACTTGGACTGGGGGTATCTA+AGG + Chr8:88467083-88467102 MsG0880047594.01.T01:intron 50.0%
!! GACTGTGAAGGCGTTAACAG+AGG + Chr8:88471183-88471202 MsG0880047594.01.T01:CDS 50.0%
!! GAGAGTGTTACCACAGATGG+TGG + Chr8:88471045-88471064 MsG0880047594.01.T01:CDS 50.0%
!! GTGGTACTGGCAACACAGAT+AGG - Chr8:88467471-88467490 None:intergenic 50.0%
ACTGCAGTACCCTTGGTCAG+GGG + Chr8:88469528-88469547 MsG0880047594.01.T01:intron 55.0%
CACCGGAAGGTTATAGTGCC+TGG + Chr8:88468824-88468843 MsG0880047594.01.T01:CDS 55.0%
CACTGCAGTACCCTTGGTCA+GGG + Chr8:88469527-88469546 MsG0880047594.01.T01:intron 55.0%
CGCCCAAAGACACGAGATGA+TGG - Chr8:88467379-88467398 None:intergenic 55.0%
CTCTGCACCGAACAACAAGG+AGG - Chr8:88465514-88465533 None:intergenic 55.0%
CTTTGCCGAAACTGCATGGG+CGG + Chr8:88468481-88468500 MsG0880047594.01.T01:intron 55.0%
GCACCGAACAACAAGGAGGA+AGG - Chr8:88465510-88465529 None:intergenic 55.0%
GCACTATAACCTTCCGGTGC+TGG - Chr8:88468823-88468842 None:intergenic 55.0%
GGTGGGGGCTCCAGAATTTA+AGG + Chr8:88468990-88469009 MsG0880047594.01.T01:intron 55.0%
TCACTGCAGTACCCTTGGTC+AGG + Chr8:88469526-88469545 MsG0880047594.01.T01:intron 55.0%
TCAGTCCCTTACCCTTAGGC+TGG + Chr8:88470176-88470195 MsG0880047594.01.T01:CDS 55.0%
TCATCTCGTGTCTTTGGGCG+GGG + Chr8:88467379-88467398 MsG0880047594.01.T01:intron 55.0%
TTTGCCGAAACTGCATGGGC+GGG + Chr8:88468482-88468501 MsG0880047594.01.T01:intron 55.0%
! AGAACCAGATCTGGGGTCCA+GGG - Chr8:88471143-88471162 None:intergenic 55.0%
! AGCTTAGAGAGCGTGTGAGG+CGG + Chr8:88470262-88470281 MsG0880047594.01.T01:intron 55.0%
! GGAGCTTTTAACATGGGCCC+TGG + Chr8:88471123-88471142 MsG0880047594.01.T01:CDS 55.0%
! TAGAACCAGATCTGGGGTCC+AGG - Chr8:88471144-88471163 None:intergenic 55.0%
! TGCCAATCAGAAGCGCGAAG+AGG - Chr8:88469618-88469637 None:intergenic 55.0%
! TGGTCGATCACTTGGACTGG+GGG + Chr8:88467074-88467093 MsG0880047594.01.T01:intron 55.0%
! TTGTGAGAACCAGCACCGGA+AGG + Chr8:88468811-88468830 MsG0880047594.01.T01:intron 55.0%
!! GTGCTGCTTCCATGACTCCA+TGG - Chr8:88466997-88467016 None:intergenic 55.0%
!! GTTACCACAGATGGTGGGAG+AGG + Chr8:88471051-88471070 MsG0880047594.01.T01:CDS 55.0%
AGCACCCGCCCATGCAGTTT+CGG - Chr8:88468489-88468508 None:intergenic 60.0%
CACACCTCTCCCACCATCTG+TGG - Chr8:88471058-88471077 None:intergenic 60.0%
CGCCTTCACAGTCCGAGTAG+AGG - Chr8:88471176-88471195 None:intergenic 60.0%
GTCCCTTACCCTTAGGCTGG+AGG + Chr8:88470179-88470198 MsG0880047594.01.T01:CDS 60.0%
!! CACAGATGGTGGGAGAGGTG+TGG + Chr8:88471056-88471075 MsG0880047594.01.T01:CDS 60.0%
!! GGGGGGGTTAGTTGGTAGGA+GGG + Chr8:88467692-88467711 MsG0880047594.01.T01:intron 60.0%
GGAGGCTGAGTTCTGTGGGG+AGG + Chr8:88471102-88471121 MsG0880047594.01.T01:CDS 65.0%
! TTTGGGGGGGGGGGGTTAGT+TGG + Chr8:88467684-88467703 MsG0880047594.01.T01:intron 65.0%
!! GGGGGGGGTTAGTTGGTAGG+AGG + Chr8:88467691-88467710 MsG0880047594.01.T01:intron 65.0%
TGGGCCCTGGACCCCAGATC+TGG + Chr8:88471136-88471155 MsG0880047594.01.T01:CDS 70.0%
!! GGGGGGGGGGGTTAGTTGGT+AGG + Chr8:88467688-88467707 MsG0880047594.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 88465467 88471405 88465467 ID=MsG0880047594.01;Name=MsG0880047594.01
Chr8 mRNA 88465467 88471405 88465467 ID=MsG0880047594.01.T01;Parent=MsG0880047594.01;Name=MsG0880047594.01.T01;_AED=0.42;_eAED=0.45;_QI=0|0.25|0.4|1|0.25|0.4|5|0|302
Chr8 exon 88465467 88465631 88465467 ID=MsG0880047594.01.T01:exon:2292;Parent=MsG0880047594.01.T01
Chr8 exon 88466565 88466655 88466565 ID=MsG0880047594.01.T01:exon:2293;Parent=MsG0880047594.01.T01
Chr8 exon 88468824 88468942 88468824 ID=MsG0880047594.01.T01:exon:2294;Parent=MsG0880047594.01.T01
Chr8 exon 88470168 88470275 88470168 ID=MsG0880047594.01.T01:exon:2295;Parent=MsG0880047594.01.T01
Chr8 exon 88470980 88471405 88470980 ID=MsG0880047594.01.T01:exon:2296;Parent=MsG0880047594.01.T01
Chr8 CDS 88465467 88465631 88465467 ID=MsG0880047594.01.T01:cds;Parent=MsG0880047594.01.T01
Chr8 CDS 88466565 88466655 88466565 ID=MsG0880047594.01.T01:cds;Parent=MsG0880047594.01.T01
Chr8 CDS 88468824 88468942 88468824 ID=MsG0880047594.01.T01:cds;Parent=MsG0880047594.01.T01
Chr8 CDS 88470168 88470275 88470168 ID=MsG0880047594.01.T01:cds;Parent=MsG0880047594.01.T01
Chr8 CDS 88470980 88471405 88470980 ID=MsG0880047594.01.T01:cds;Parent=MsG0880047594.01.T01
Gene Sequence

>MsG0880047594.01.T01

ATTTTAATTAGTTTTTTTTTTTGTGATTTGAGATTAGGATCCTTCCTCCTTGTTGTTCGGTGCAGAGTTTGTGTTGCAGACTGCAATCAACTTCTCTCTCTTCTTCTTCTTCTTCGAAGTCACCGCAACTTCAACTTCACTTTCAACAGTTTCTCTCTCTATGAGGTTGTGCATCTGCGACCTACTGTTGAAAGATGTTTGACCGAAGTGATTACAAATCACAGTACATGGATGGCCAGCGAGAAAGTTCTTTTAGCACCGGAAGGTTATAGTGCCTGGCAAAACAAAAGCAAAGCTATTTTTAAATCAAAGTGCTCTGTAGATGATGATCCTCCACCTTTTGATTATGGAATTTTAAGCAAGCCTTGTCATCTGACATATCTTCAGTCCCTTACCCTTAGGCTGGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAATGGATGCATCATCGCTTGCTCCCAAAAGAGCTTAGAGAGCGTAGAATACTTATATTGTTCGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATACGCGGGCGTCTTGAGAGTGTTACCACAGATGGTGGGAGAGGTGTGGTTTTTTCAACCGCACATATCTAAGGAGGCTGAGTTCTGTGGGGAGGAGCTTTTAACATGGGCCCTGGACCCCAGATCTGGTTCTAATCTTCCAACCTCTACTCGGACTGTGAAGGCGTTAACAGAGGTTGAGACTTTTGCCTTAACCGCCGATGAGCTGAAATTTGTTGCCAGTCAGTTTAGACGTCTTCACAGTAGACAGGTTCAAACACATTTTCGTTTTTACTCTCAACAATGGAGAACCTGGGCTGCTTGTTTATTCAAGCAGCATGGCGTCGATATTGTTAAAAAAAATTATGAAGCTTCGTCAGAAGGAAGAAGCGGATGA

Protein sequence

>MsG0880047594.01.T01

ILISFFFCDLRLGSFLLVVRCRVCVADCNQLLSLLLLLRSHRNFNFTFNSFSLYEVVHLRPTVERCLTEVITNHSTWMASEKVLLAPEGYSAWQNKSKAIFKSKCSVDDDPPPFDYGILSKPCHLTYLQSLTLRLEEMRVKRRDSEQWMHHRLLPKELRERRILILFGKEIQLMRCFSYAGVLRVLPQMVGEVWFFQPHISKEAEFCGEELLTWALDPRSGSNLPTSTRTVKALTEVETFALTADELKFVASQFRRLHSRQVQTHFRFYSQQWRTWAACLFKQHGVDIVKKNYEASSEGRSG*