AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045329.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045329.01.T01 MTR_8g069850 93.750 112 5 2 1 111 1 111 1.68e-70 213
MsG0880045329.01.T01 MTR_5g049240 65.179 112 37 2 1 111 1 111 2.60e-49 161
MsG0880045329.01.T01 MTR_5g049230 66.071 112 36 2 1 111 1 111 1.14e-39 134
MsG0880045329.01.T01 MTR_5g049240 69.697 66 18 2 47 111 2 66 1.89e-25 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045329.01.T01 AT1G13580 60.714 112 42 2 1 111 1 111 3.40e-44 144
MsG0880045329.01.T01 AT1G13580 60.714 112 42 2 1 111 1 111 2.80e-43 144
MsG0880045329.01.T01 AT1G13580 60.714 112 42 2 1 111 1 111 2.80e-43 144
MsG0880045329.01.T01 AT3G25540 54.783 115 47 3 1 111 1 114 5.40e-37 125
MsG0880045329.01.T01 AT3G25540 54.783 115 47 3 1 111 1 114 2.77e-36 125
MsG0880045329.01.T01 AT3G25540 54.783 115 47 3 1 111 1 114 2.77e-36 125
MsG0880045329.01.T01 AT1G26200 50.980 102 45 3 11 111 10 107 6.47e-24 92.0
MsG0880045329.01.T01 AT1G26200 50.980 102 45 3 11 111 10 107 2.19e-23 92.4
MsG0880045329.01.T01 AT1G26200 50.980 102 45 3 11 111 10 107 2.50e-23 92.4

Find 91 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACCAATACAAGATATTT+TGG 0.107205 8:+57581750 MsG0880045329.01.T01:CDS
AAAGAGGATTAATAAATTTA+AGG 0.158034 8:+57581656 MsG0880045329.01.T01:CDS
TTTCAAATGTTCATTCAAAT+TGG 0.216262 8:+57586504 MsG0880045329.01.T01:three_prime_UTR
AAACAAGGCGCTCGGACTTT+GGG 0.247453 8:+57582035 MsG0880045329.01.T01:three_prime_UTR
TGCTGGTTATGCATATTTAT+TGG 0.249853 8:+57584966 MsG0880045329.01.T01:three_prime_UTR
TTATCCTTTGGTTTCCATAT+TGG 0.260941 8:+57586788 MsG0880045329.01.T01:three_prime_UTR
ACTACCCATTCTGGATTCTT+TGG 0.271963 8:+57583169 MsG0880045329.01.T01:three_prime_UTR
GTGGCAAGAAGATTGATATT+TGG 0.276513 8:+57581591 MsG0880045329.01.T01:CDS
AGACTACGGAGCTGATTTAA+AGG 0.276937 8:+57586562 MsG0880045329.01.T01:three_prime_UTR
TTTGAATGAACATTTGAAAA+TGG 0.281985 8:-57586500 None:intergenic
TTAAACTTAATGTTGACTTT+AGG 0.305486 8:+57586854 MsG0880045329.01.T01:three_prime_UTR
GAAACAAGGCGCTCGGACTT+TGG 0.310182 8:+57582034 MsG0880045329.01.T01:three_prime_UTR
AGGAGGGAATTGTATTTATA+CGG 0.319237 8:+57586527 MsG0880045329.01.T01:three_prime_UTR
GTCAAACCATTATAACAAAA+TGG 0.320408 8:-57586661 None:intergenic
ATTGGTGGGTATTGATATAT+CGG 0.324868 8:+57584984 MsG0880045329.01.T01:three_prime_UTR
CGACAATTTGATCTCCAATA+TGG 0.326458 8:-57586802 None:intergenic
CGTTTATTCTGCAGATGAAT+TGG 0.328911 8:+57586437 MsG0880045329.01.T01:intron
ATGTTTCTGTCCTGTTTATT+CGG 0.352377 8:-57580267 None:intergenic
GCCTCATTTACTACCCATTC+TGG 0.356006 8:+57583160 MsG0880045329.01.T01:three_prime_UTR
TTTGGGTGGGACGGGGAGTC+AGG 0.377931 8:+57581768 MsG0880045329.01.T01:CDS
TTGAATATATAATAATATAT+TGG 0.382708 8:-57584927 None:intergenic
CTTGCACAAATATTATCCTT+TGG 0.386600 8:+57586776 MsG0880045329.01.T01:three_prime_UTR
CAGTCCTTCAAACTTGTACT+TGG 0.398949 8:-57586731 None:intergenic
GTGGGACGGGGAGTCAGGTC+TGG 0.406577 8:+57581773 MsG0880045329.01.T01:CDS
TCTGGATTCTTTGGAGTACA+AGG 0.424637 8:+57583178 MsG0880045329.01.T01:three_prime_UTR
TCTTTCTAATTTATCAAAGA+AGG 0.426843 8:+57586888 MsG0880045329.01.T01:three_prime_UTR
TACATTCAGGTTTGCTCGTG+TGG 0.435236 8:+57583006 MsG0880045329.01.T01:intron
AGTGACGTGTTTCTCGAGAT+AGG 0.438572 8:+57583057 MsG0880045329.01.T01:three_prime_UTR
AGGTAGAAATCTTGATAGAC+AGG 0.444183 8:-57580442 None:intergenic
TATGCAGCACCACAACGTTC+AGG 0.447965 8:+57586627 MsG0880045329.01.T01:three_prime_UTR
GGGAAGAAGAGAGCGAAGAA+AGG 0.452562 8:-57580469 None:intergenic
TCTTGATAGATTCCTCTTCG+AGG 0.458200 8:+57580507 MsG0880045329.01.T01:CDS
CAAATGTTCATTCAAATTGG+AGG 0.458402 8:+57586507 MsG0880045329.01.T01:three_prime_UTR
AGTTCTGCTCACCTTGGATA+AGG 0.458502 8:+57584884 MsG0880045329.01.T01:three_prime_UTR
ATAGTCTTCTATACTGCTGC+TGG 0.463575 8:+57584949 MsG0880045329.01.T01:three_prime_UTR
GACTACGGAGCTGATTTAAA+GGG 0.468083 8:+57586563 MsG0880045329.01.T01:three_prime_UTR
GATAGATCGTTGAAAAGAAT+AGG 0.473909 8:-57580295 None:intergenic
AGAGAGCGAAGAAAGGAAGA+AGG 0.475439 8:-57580462 None:intergenic
ACAGTCTATATGTATACTGC+TGG 0.476562 8:+57581974 MsG0880045329.01.T01:three_prime_UTR
GAAAGTCAATGGAATTGAAT+CGG 0.481025 8:-57580405 None:intergenic
CTTAGTGAAGACGTTCGATC+TGG 0.481179 8:+57585040 MsG0880045329.01.T01:three_prime_UTR
CCACCCAAAATATCTTGTAT+TGG 0.487810 8:-57581754 None:intergenic
AGAAGATTGATATTTGGAAA+GGG 0.489208 8:+57581597 MsG0880045329.01.T01:CDS
AATGAATGATGAGGCCTTGA+GGG 0.494320 8:-57586700 None:intergenic
TGGTTATGCATATTTATTGG+TGG 0.499173 8:+57584969 MsG0880045329.01.T01:three_prime_UTR
TACTCCAAAGAATCCAGAAT+GGG 0.506344 8:-57583173 None:intergenic
GAAGATTGATATTTGGAAAG+GGG 0.512206 8:+57581598 MsG0880045329.01.T01:CDS
AAGAAGATTGATATTTGGAA+AGG 0.512348 8:+57581596 MsG0880045329.01.T01:CDS
AACAAGGCGCTCGGACTTTG+GGG 0.522305 8:+57582036 MsG0880045329.01.T01:three_prime_UTR
GGTTATGCATATTTATTGGT+GGG 0.532419 8:+57584970 MsG0880045329.01.T01:three_prime_UTR
ATGTTCATTCAAATTGGAGG+AGG 0.535128 8:+57586510 MsG0880045329.01.T01:three_prime_UTR
ATAAATTTAAGGAATCAGCT+TGG 0.539246 8:+57581667 MsG0880045329.01.T01:CDS
AAACAGATGATAGAAGAAAG+AGG 0.541052 8:+57581640 MsG0880045329.01.T01:CDS
GTGTCCACATGAGGCTCCGT+GGG 0.541314 8:-57586950 None:intergenic
TCAAGAAGGAAGCGAATGGA+AGG 0.543777 8:-57580490 None:intergenic
AGATTCATGATGAAAGTCAA+TGG 0.551627 8:-57580416 None:intergenic
TCCAGAATGGGTAGTAAATG+AGG 0.553980 8:-57583161 None:intergenic
AATATATTGGACCTTCCACT+TGG 0.560357 8:-57584914 None:intergenic
CTATGAAGTTCTGCTCACCT+TGG 0.565640 8:+57584878 MsG0880045329.01.T01:three_prime_UTR
TAAATAAATAATCATTACCA+TGG 0.569683 8:+57580372 MsG0880045329.01.T01:exon
GTGACGTGTTTCTCGAGATA+GGG 0.570096 8:+57583058 MsG0880045329.01.T01:three_prime_UTR
GTTAAACAAATCCAAGCAAG+AGG 0.572899 8:+57585013 MsG0880045329.01.T01:three_prime_UTR
GAATCGGTCAATGAAATCCA+TGG 0.575581 8:-57580389 None:intergenic
GTGTAACTTATGATGAACCT+TGG 0.587967 8:+57581727 MsG0880045329.01.T01:CDS
GTACTCCAAAGAATCCAGAA+TGG 0.588468 8:-57583174 None:intergenic
TGTTCATTCAAATTGGAGGA+GGG 0.588650 8:+57586511 MsG0880045329.01.T01:three_prime_UTR
GAAAATTTGAATGAATGATG+AGG 0.591960 8:-57586709 None:intergenic
AAGGAAAAGCACCAAGTGGA+AGG 0.594350 8:+57584903 MsG0880045329.01.T01:three_prime_UTR
TTGCATGATGTGGCATATGA+AGG 0.599479 8:-57586978 None:intergenic
CGAAGAGGAATCTATCAAGA+AGG 0.602895 8:-57580504 None:intergenic
ATTATATAATCACAATGCAA+AGG 0.607238 8:+57585606 MsG0880045329.01.T01:three_prime_UTR
TCTATCAAGAAGGAAGCGAA+TGG 0.607360 8:-57580494 None:intergenic
ATCTCCAATATGGAAACCAA+AGG 0.608336 8:-57586792 None:intergenic
TATCTTGTATTGGTAAACCA+AGG 0.608741 8:-57581744 None:intergenic
AGTGTCCACATGAGGCTCCG+TGG 0.615906 8:-57586951 None:intergenic
TCTGTCCTGTTTATTCGGTG+TGG 0.620331 8:-57580262 None:intergenic
GGGAAAATGTCTAAATACAG+TGG 0.634966 8:+57583078 MsG0880045329.01.T01:three_prime_UTR
CAGACCCACGGAGCCTCATG+TGG 0.638502 8:+57586946 MsG0880045329.01.T01:three_prime_UTR
CAAGAAGGAAGCGAATGGAA+GGG 0.641229 8:-57580489 None:intergenic
AAGGATGGAGTGTCCACATG+AGG 0.642454 8:-57586959 None:intergenic
GAATGAATGATGAGGCCTTG+AGG 0.647474 8:-57586701 None:intergenic
TAGAGTGACTAACCTCGAAG+AGG 0.658147 8:-57580519 None:intergenic
TGCAGCAGACCTGAACGTTG+TGG 0.661782 8:-57586636 None:intergenic
GGATTCGAGAATATAGACTA+CGG 0.662829 8:+57586548 MsG0880045329.01.T01:three_prime_UTR
ATGATGTGGCATATGAAGGA+TGG 0.675730 8:-57586974 None:intergenic
GGTAGAAATCTTGATAGACA+GGG 0.682772 8:-57580441 None:intergenic
ATAATGATATATCAGACCCA+CGG 0.686660 8:+57586934 MsG0880045329.01.T01:three_prime_UTR
GGATAAGGAAAAGCACCAAG+TGG 0.700950 8:+57584899 MsG0880045329.01.T01:three_prime_UTR
CAACACAATGAGAATGACAG+TGG 0.718759 8:-57582080 None:intergenic
ATGAATGATGAGGCCTTGAG+GGG 0.719303 8:-57586699 None:intergenic
CATTTGAAAATGGTTGACAG+TGG 0.719432 8:-57586490 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAAATTAATAAAAAA+AGG - Chr8:57580569-57580588 None:intergenic 0.0%
!! AATTTAAATTCATGTTTATT+AGG + Chr8:57586304-57586323 MsG0880045329.01.T01:intron 10.0%
!! ATGAATTTAAATTATAACTT+AGG - Chr8:57586297-57586316 None:intergenic 10.0%
!!! TAACTTTTAGTTTATAATAT+CGG - Chr8:57586101-57586120 None:intergenic 10.0%
!!! TGATTGATTTAATTTTTTAT+AGG + Chr8:57580720-57580739 MsG0880045329.01.T01:intron 10.0%
!!! TTTTAATTTCAAAAAGAAAA+CGG + Chr8:57586177-57586196 MsG0880045329.01.T01:intron 10.0%
!! AAAGAGGATTAATAAATTTA+AGG + Chr8:57581656-57581675 MsG0880045329.01.T01:CDS 15.0%
!! AAGTAGAAATAAATGTAATT+TGG - Chr8:57583222-57583241 None:intergenic 15.0%
!! AATATAAAAGTAATAATGCA+AGG - Chr8:57584203-57584222 None:intergenic 15.0%
!! TAAATAAATAATCATTACCA+TGG + Chr8:57580372-57580391 MsG0880045329.01.T01:exon 15.0%
!! TGTTTAAAAAAAAAGATACT+CGG + Chr8:57583664-57583683 MsG0880045329.01.T01:intron 15.0%
!! TTAACAAGAACAATTAATAA+TGG - Chr8:57584500-57584519 None:intergenic 15.0%
!!! AATTGTAAATTTTAACTAAG+AGG + Chr8:57585470-57585489 MsG0880045329.01.T01:intron 15.0%
!!! AGTACAAGTTTTATTATTAT+TGG + Chr8:57585728-57585747 MsG0880045329.01.T01:intron 15.0%
!!! ATATATACATATCAGTATTT+TGG + Chr8:57581023-57581042 MsG0880045329.01.T01:intron 15.0%
!!! ATTGTTAAAATTTTGTTTGA+CGG - Chr8:57584768-57584787 None:intergenic 15.0%
!!! ATTTGTGTTTTTTTTTATAG+TGG + Chr8:57580756-57580775 MsG0880045329.01.T01:intron 15.0%
!!! CATTTTTGCTTTAATATTTT+GGG + Chr8:57582012-57582031 MsG0880045329.01.T01:three_prime_UTR 15.0%
!!! GTACAAGTTTTATTATTATT+GGG + Chr8:57585729-57585748 MsG0880045329.01.T01:intron 15.0%
!!! TAGCTATTTTTTTATAATGT+AGG + Chr8:57581104-57581123 MsG0880045329.01.T01:intron 15.0%
!!! TATTTACATATTTTTCCAAT+TGG + Chr8:57583416-57583435 MsG0880045329.01.T01:intron 15.0%
!!! TTCTTTAACTTTTTATGTAA+GGG - Chr8:57584140-57584159 None:intergenic 15.0%
!!! TTTCTTTAACTTTTTATGTA+AGG - Chr8:57584141-57584160 None:intergenic 15.0%
!!! TTTTAACAATTCAATATAAG+TGG + Chr8:57584778-57584797 MsG0880045329.01.T01:intron 15.0%
!!! TTTTTTATAGGTGAAAATTT+TGG + Chr8:57580732-57580751 MsG0880045329.01.T01:intron 15.0%
!! AATTTCACAAGAAAAAAACT+TGG - Chr8:57582155-57582174 None:intergenic 20.0%
!! ATTATATAATCACAATGCAA+AGG + Chr8:57585606-57585625 MsG0880045329.01.T01:three_prime_UTR 20.0%
!! ATTGTGTTAAAATAAGACTT+GGG - Chr8:57584730-57584749 None:intergenic 20.0%
!! CATTAAGTATATGTATTAAG+AGG - Chr8:57583312-57583331 None:intergenic 20.0%
!! CCAAAATATTAAAGCAAAAA+TGG - Chr8:57582014-57582033 None:intergenic 20.0%
!! GATAAAATTCACATGATAAT+AGG - Chr8:57583268-57583287 None:intergenic 20.0%
!! GATTATATTCATTATGTCTA+GGG - Chr8:57585663-57585682 None:intergenic 20.0%
!! GTTTAATTCACTCATTAAAA+CGG + Chr8:57585291-57585310 MsG0880045329.01.T01:intron 20.0%
!! GTTTCAAATTTGAATGTAAA+TGG + Chr8:57584262-57584281 MsG0880045329.01.T01:intron 20.0%
!! TAATGAGTGAATTAAACAAA+AGG - Chr8:57585288-57585307 None:intergenic 20.0%
!! TATTGTGTTAAAATAAGACT+TGG - Chr8:57584731-57584750 None:intergenic 20.0%
!! TCTTTCTAATTTATCAAAGA+AGG + Chr8:57586888-57586907 MsG0880045329.01.T01:three_prime_UTR 20.0%
!! TGATTATATTCATTATGTCT+AGG - Chr8:57585664-57585683 None:intergenic 20.0%
!! TTAAAACTTTAAGCTACAAA+TGG - Chr8:57581139-57581158 None:intergenic 20.0%
!! TTGAAATCAATTATGCTTAA+TGG + Chr8:57586368-57586387 MsG0880045329.01.T01:intron 20.0%
!! TTTAATTCACTCATTAAAAC+GGG + Chr8:57585292-57585311 MsG0880045329.01.T01:intron 20.0%
!! TTTATCTGGTCAATAAATAT+AGG + Chr8:57583282-57583301 MsG0880045329.01.T01:intron 20.0%
!! TTTCAAATGTTCATTCAAAT+TGG + Chr8:57586504-57586523 MsG0880045329.01.T01:three_prime_UTR 20.0%
!! TTTGAATGAACATTTGAAAA+TGG - Chr8:57586503-57586522 None:intergenic 20.0%
!!! ACCTTTTTCTATCATTAAAA+GGG + Chr8:57580947-57580966 MsG0880045329.01.T01:intron 20.0%
!!! ATCTTCATTATAGTTTTTCT+AGG - Chr8:57582813-57582832 None:intergenic 20.0%
!!! ATTATCATGTGAATTTTATC+TGG + Chr8:57583268-57583287 MsG0880045329.01.T01:intron 20.0%
!!! CAAGTTTTTTTAGAATAAGA+AGG - Chr8:57584441-57584460 None:intergenic 20.0%
!!! CCATTTTTGCTTTAATATTT+TGG + Chr8:57582011-57582030 MsG0880045329.01.T01:three_prime_UTR 20.0%
!!! CTACTTTCTATTATATTTTC+TGG + Chr8:57583236-57583255 MsG0880045329.01.T01:intron 20.0%
!!! GAATTTATTGAAAACTTTTG+TGG + Chr8:57580914-57580933 MsG0880045329.01.T01:intron 20.0%
!!! TAATAATGGACAGTATAAAA+AGG - Chr8:57584486-57584505 None:intergenic 20.0%
!!! TACCTTTTTCTATCATTAAA+AGG + Chr8:57580946-57580965 MsG0880045329.01.T01:intron 20.0%
!!! TACTATAAGTATGAGAATTT+TGG - Chr8:57585974-57585993 None:intergenic 20.0%
!!! TCTTGTGAAATTTGATTTTT+TGG + Chr8:57582163-57582182 MsG0880045329.01.T01:intron 20.0%
!!! TCTTTAACTTTTTATGTAAG+GGG - Chr8:57584139-57584158 None:intergenic 20.0%
!!! TTAAACTTAATGTTGACTTT+AGG + Chr8:57586854-57586873 MsG0880045329.01.T01:three_prime_UTR 20.0%
!!! TTACCAATACAAGATATTTT+GGG + Chr8:57581751-57581770 MsG0880045329.01.T01:CDS 20.0%
!!! TTTACCAATACAAGATATTT+TGG + Chr8:57581750-57581769 MsG0880045329.01.T01:CDS 20.0%
!!! TTTAGTTTATAATATCGGTA+TGG - Chr8:57586096-57586115 None:intergenic 20.0%
!!! TTTATTTAAAACACTGCATA+TGG - Chr8:57585136-57585155 None:intergenic 20.0%
!!! TTTTATTGATAAGGACAAAT+TGG + Chr8:57584292-57584311 MsG0880045329.01.T01:intron 20.0%
!!! TTTTCTATGTTAATACATTC+AGG + Chr8:57582993-57583012 MsG0880045329.01.T01:intron 20.0%
!!! TTTTGAGAGTATTATAAACA+CGG + Chr8:57585923-57585942 MsG0880045329.01.T01:intron 20.0%
! AAAATGCACATAAAAACGTT+TGG - Chr8:57586469-57586488 None:intergenic 25.0%
! AAACAAATGACAACATATGT+TGG - Chr8:57580650-57580669 None:intergenic 25.0%
! AACTAACCATACCAATAAAA+TGG - Chr8:57583758-57583777 None:intergenic 25.0%
! AACTTCATCAAAGATTGATA+AGG - Chr8:57585089-57585108 None:intergenic 25.0%
! AAGAAGATTGATATTTGGAA+AGG + Chr8:57581596-57581615 MsG0880045329.01.T01:CDS 25.0%
! AGAACGATAGATACATATAA+AGG - Chr8:57580995-57581014 None:intergenic 25.0%
! AGAAGATTGATATTTGGAAA+GGG + Chr8:57581597-57581616 MsG0880045329.01.T01:CDS 25.0%
! AGGGCTTAATATAATAACAA+TGG - Chr8:57584402-57584421 None:intergenic 25.0%
! ATAAATTTAAGGAATCAGCT+TGG + Chr8:57581667-57581686 MsG0880045329.01.T01:CDS 25.0%
! ATAATTAATGAAGACCATAG+AGG - Chr8:57581398-57581417 None:intergenic 25.0%
! ATAGAGAAAATAACACCATT+TGG - Chr8:57584361-57584380 None:intergenic 25.0%
! ATTCAAAAATCATTCGTGTA+AGG - Chr8:57586023-57586042 None:intergenic 25.0%
! CACATTCAACTCTTTAAATA+AGG - Chr8:57582241-57582260 None:intergenic 25.0%
! CATTCTTTCAGAATGTATAA+CGG - Chr8:57583351-57583370 None:intergenic 25.0%
! GAAAATTTGAATGAATGATG+AGG - Chr8:57586712-57586731 None:intergenic 25.0%
! GGTGGTTTATATTATGTATT+GGG + Chr8:57583565-57583584 MsG0880045329.01.T01:intron 25.0%
! GTAGAAAAAATGTGGAAAAT+AGG + Chr8:57582689-57582708 MsG0880045329.01.T01:intron 25.0%
! GTCAAACCATTATAACAAAA+TGG - Chr8:57586664-57586683 None:intergenic 25.0%
! GTGGTTTATATTATGTATTG+GGG + Chr8:57583566-57583585 MsG0880045329.01.T01:intron 25.0%
! TAAAATAAAATCTGTCCTCA+CGG + Chr8:57584691-57584710 MsG0880045329.01.T01:intron 25.0%
! TAATGTTTGAGAAGAGATAA+AGG + Chr8:57584084-57584103 MsG0880045329.01.T01:intron 25.0%
! TATATGAAAAACACATCAGA+GGG - Chr8:57585382-57585401 None:intergenic 25.0%
! TCTCTTCTCAAACATTAAAT+AGG - Chr8:57584081-57584100 None:intergenic 25.0%
! TGGTGGTTTATATTATGTAT+TGG + Chr8:57583564-57583583 MsG0880045329.01.T01:intron 25.0%
! TGGTTTATATTATGTATTGG+GGG + Chr8:57583567-57583586 MsG0880045329.01.T01:intron 25.0%
! TTAATGAGTGGATCTAAATA+TGG + Chr8:57582840-57582859 MsG0880045329.01.T01:intron 25.0%
! TTAATTCACTCATTAAAACG+GGG + Chr8:57585293-57585312 MsG0880045329.01.T01:intron 25.0%
! TTATATGAAAAACACATCAG+AGG - Chr8:57585383-57585402 None:intergenic 25.0%
! TTATTATATTAAGCCCTTGT+AGG + Chr8:57584405-57584424 MsG0880045329.01.T01:intron 25.0%
! TTATTGTGTCTAATAGTCTA+TGG + Chr8:57581414-57581433 MsG0880045329.01.T01:intron 25.0%
! TTCTCAAACATTAAATAGGT+AGG - Chr8:57584077-57584096 None:intergenic 25.0%
! TTGAATTTGAAGAGAAACAA+GGG - Chr8:57583378-57583397 None:intergenic 25.0%
! TTGTAATTGTTTGATATGTC+TGG + Chr8:57582196-57582215 MsG0880045329.01.T01:intron 25.0%
!! AAATAACACCATTTGGATTT+TGG - Chr8:57584354-57584373 None:intergenic 25.0%
!! AAATTTTGTGAAGATGTAGA+CGG - Chr8:57581081-57581100 None:intergenic 25.0%
!! AAGATTTAGAGTTTAATGAG+TGG + Chr8:57582828-57582847 MsG0880045329.01.T01:intron 25.0%
!! ACCCTTTTAATGATAGAAAA+AGG - Chr8:57580951-57580970 None:intergenic 25.0%
!! AGAAAATATCTCCATGTTTT+AGG + Chr8:57583720-57583739 MsG0880045329.01.T01:intron 25.0%
!! AGCATAATTGATTTCAACTA+AGG - Chr8:57586365-57586384 None:intergenic 25.0%
!! ATAAGTATGAGAATTTTGGA+GGG - Chr8:57585970-57585989 None:intergenic 25.0%
!! CTAGTAATTTTGTGCAAATA+AGG - Chr8:57586829-57586848 None:intergenic 25.0%
!! GTCCATATTATGTCTAAAAT+AGG + Chr8:57586061-57586080 MsG0880045329.01.T01:intron 25.0%
!! TATAAGTATGAGAATTTTGG+AGG - Chr8:57585971-57585990 None:intergenic 25.0%
!! TATTCTATTCGTTTTGTCTT+GGG + Chr8:57583128-57583147 MsG0880045329.01.T01:three_prime_UTR 25.0%
!! TATTTTCTCTATGACATGTT+TGG + Chr8:57584369-57584388 MsG0880045329.01.T01:intron 25.0%
!! TGCGTAAATATCATAAGTTT+TGG + Chr8:57584045-57584064 MsG0880045329.01.T01:intron 25.0%
!! TTATTCTATTCGTTTTGTCT+TGG + Chr8:57583127-57583146 MsG0880045329.01.T01:three_prime_UTR 25.0%
!! TTGTGTTGTCTTACATTTTT+AGG + Chr8:57582095-57582114 MsG0880045329.01.T01:three_prime_UTR 25.0%
!!! AATATCATAAGTTTTGGTTG+AGG + Chr8:57584051-57584070 MsG0880045329.01.T01:intron 25.0%
!!! ACTATAGTTTTATCGATTCT+TGG + Chr8:57583780-57583799 MsG0880045329.01.T01:intron 25.0%
!!! CTAGAACTTTTAATTTTGAG+AGG - Chr8:57585196-57585215 None:intergenic 25.0%
!!! CTTTAACTTTTTATGTAAGG+GGG - Chr8:57584138-57584157 None:intergenic 25.0%
!!! CTTTAATATTTTGGGAAACA+AGG + Chr8:57582020-57582039 MsG0880045329.01.T01:three_prime_UTR 25.0%
!!! GACCTATTTTAGACATAATA+TGG - Chr8:57586066-57586085 None:intergenic 25.0%
!!! GCTTACTTAATTTTTTGATC+TGG - Chr8:57581799-57581818 None:intergenic 25.0%
!!! TTATTAGGTATTGAGATAGA+GGG + Chr8:57586319-57586338 MsG0880045329.01.T01:intron 25.0%
!!! TTCCACATTTTTTCTACTAT+AGG - Chr8:57582686-57582705 None:intergenic 25.0%
!!! TTCTTTCAATTTTGAAGTCT+TGG + Chr8:57581461-57581480 MsG0880045329.01.T01:intron 25.0%
!!! TTTATTAGGTATTGAGATAG+AGG + Chr8:57586318-57586337 MsG0880045329.01.T01:intron 25.0%
!!! TTTTTCAGTTAATTAGCTCA+TGG + Chr8:57584003-57584022 MsG0880045329.01.T01:intron 25.0%
AAAAATCATTCGTGTAAGGA+GGG - Chr8:57586019-57586038 None:intergenic 30.0%
AAAATAAAATCTGTCCTCAC+GGG + Chr8:57584692-57584711 MsG0880045329.01.T01:intron 30.0%
AAAATGTGGAAAATAGGCTT+CGG + Chr8:57582695-57582714 MsG0880045329.01.T01:intron 30.0%
AAACAGATGATAGAAGAAAG+AGG + Chr8:57581640-57581659 MsG0880045329.01.T01:CDS 30.0%
AAAGGATATGATAGGATTGT+GGG + Chr8:57584565-57584584 MsG0880045329.01.T01:intron 30.0%
AACCCTTATGAAGAGAATTA+AGG - Chr8:57583489-57583508 None:intergenic 30.0%
AAGGATTCTAATAACCTACA+AGG - Chr8:57584422-57584441 None:intergenic 30.0%
AATTCACATGATAATAGGTG+AGG - Chr8:57583263-57583282 None:intergenic 30.0%
AATTGTCACATCACATTAGT+TGG - Chr8:57581838-57581857 None:intergenic 30.0%
ACATCTAAACATTACCTCAA+TGG - Chr8:57584653-57584672 None:intergenic 30.0%
ACCCTTATGAAGAGAATTAA+GGG - Chr8:57583488-57583507 None:intergenic 30.0%
AGAATTCATCCGAAAACATA+TGG + Chr8:57584621-57584640 MsG0880045329.01.T01:intron 30.0%
AGATGTAAATTCAATGATGC+AGG - Chr8:57584177-57584196 None:intergenic 30.0%
AGATTCATGATGAAAGTCAA+TGG - Chr8:57580419-57580438 None:intergenic 30.0%
AGGAGGGAATTGTATTTATA+CGG + Chr8:57586527-57586546 MsG0880045329.01.T01:three_prime_UTR 30.0%
AGGATTCTAATAACCTACAA+GGG - Chr8:57584421-57584440 None:intergenic 30.0%
ATAATGATATATCAGACCCA+CGG + Chr8:57586934-57586953 MsG0880045329.01.T01:three_prime_UTR 30.0%
ATCCCTTAATTCTCTTCATA+AGG + Chr8:57583483-57583502 MsG0880045329.01.T01:intron 30.0%
ATGCTATATCACAAGAACAA+AGG - Chr8:57584819-57584838 None:intergenic 30.0%
ATGTTAATAACACACGAGAA+TGG + Chr8:57583960-57583979 MsG0880045329.01.T01:intron 30.0%
CAAATGTTCATTCAAATTGG+AGG + Chr8:57586507-57586526 MsG0880045329.01.T01:three_prime_UTR 30.0%
CACCTATAGTAGAAAAAATG+TGG + Chr8:57582681-57582700 MsG0880045329.01.T01:intron 30.0%
CATTTCCCTTAACAATGAAA+AGG - Chr8:57586394-57586413 None:intergenic 30.0%
CTGTGAAAAATCAAGGATAA+AGG + Chr8:57584547-57584566 MsG0880045329.01.T01:intron 30.0%
CTTGAATTTGAAGAGAAACA+AGG - Chr8:57583379-57583398 None:intergenic 30.0%
CTTGCACAAATATTATCCTT+TGG + Chr8:57586776-57586795 MsG0880045329.01.T01:three_prime_UTR 30.0%
GAAAGTCAATGGAATTGAAT+CGG - Chr8:57580408-57580427 None:intergenic 30.0%
GAACTACACAGTGTATTATT+AGG - Chr8:57582460-57582479 None:intergenic 30.0%
GAAGATTGATATTTGGAAAG+GGG + Chr8:57581598-57581617 MsG0880045329.01.T01:CDS 30.0%
GATAGATCGTTGAAAAGAAT+AGG - Chr8:57580298-57580317 None:intergenic 30.0%
GATTCTAATCTGAACTGTTT+AGG + Chr8:57583913-57583932 MsG0880045329.01.T01:intron 30.0%
GGTTATGCATATTTATTGGT+GGG + Chr8:57584970-57584989 MsG0880045329.01.T01:three_prime_UTR 30.0%
GGTTCAACTGTTAAAAATAG+AGG - Chr8:57586138-57586157 None:intergenic 30.0%
GTATAACCAAAACTACACAA+TGG - Chr8:57581194-57581213 None:intergenic 30.0%
TAAAGGATATGATAGGATTG+TGG + Chr8:57584564-57584583 MsG0880045329.01.T01:intron 30.0%
TACTGAAAAACATGAGACAT+TGG - Chr8:57582264-57582283 None:intergenic 30.0%
TATAATCATCACCTTTCATG+TGG + Chr8:57585676-57585695 MsG0880045329.01.T01:intron 30.0%
TCAACTGTTAAAAATAGAGG+TGG - Chr8:57586135-57586154 None:intergenic 30.0%
TCAAGGATAAAGGATATGAT+AGG + Chr8:57584557-57584576 MsG0880045329.01.T01:intron 30.0%
TCCCTTAATTCTCTTCATAA+GGG + Chr8:57583484-57583503 MsG0880045329.01.T01:intron 30.0%
TGAATGAAATTTGCAGAAAG+TGG + Chr8:57581572-57581591 MsG0880045329.01.T01:intron 30.0%
TGGTTATGCATATTTATTGG+TGG + Chr8:57584969-57584988 MsG0880045329.01.T01:three_prime_UTR 30.0%
TGGTTTATGATAGAACATTC+TGG + Chr8:57582860-57582879 MsG0880045329.01.T01:intron 30.0%
TTAAAATAAGACTTGGGACT+TGG - Chr8:57584724-57584743 None:intergenic 30.0%
TTAAATGAAACAAGTCTACG+AGG - Chr8:57583812-57583831 None:intergenic 30.0%
TTCATGTGGATGAAAAATGT+TGG + Chr8:57585690-57585709 MsG0880045329.01.T01:intron 30.0%
TTGGAAGCTTATTACTATAG+TGG + Chr8:57583544-57583563 MsG0880045329.01.T01:intron 30.0%
TTGTCCTTATCAATAAAACC+TGG - Chr8:57584290-57584309 None:intergenic 30.0%
TTTCAACCTGAAATGTCATA+AGG - Chr8:57581948-57581967 None:intergenic 30.0%
! AAATTTGAAACTCTTGAGAG+TGG - Chr8:57584253-57584272 None:intergenic 30.0%
! AATGGCCTTTTCATTGTTAA+GGG + Chr8:57586386-57586405 MsG0880045329.01.T01:intron 30.0%
! ACATTTTTCATCCACATGAA+AGG - Chr8:57585690-57585709 None:intergenic 30.0%
! ACTATACGAAAGTATGAAAC+AGG - Chr8:57586233-57586252 None:intergenic 30.0%
! ATGTTTCTGTCCTGTTTATT+CGG - Chr8:57580270-57580289 None:intergenic 30.0%
! ATTTTTAACAGTTGAACCCA+AGG + Chr8:57586140-57586159 MsG0880045329.01.T01:intron 30.0%
! CTTTATCCTTGATTTTTCAC+AGG - Chr8:57584549-57584568 None:intergenic 30.0%
! TAATGGCCTTTTCATTGTTA+AGG + Chr8:57586385-57586404 MsG0880045329.01.T01:intron 30.0%
! TATAAAAAGGAGAGCATGAA+TGG - Chr8:57584473-57584492 None:intergenic 30.0%
! TATCTTGTATTGGTAAACCA+AGG - Chr8:57581747-57581766 None:intergenic 30.0%
! TGCTGGTTATGCATATTTAT+TGG + Chr8:57584966-57584985 MsG0880045329.01.T01:three_prime_UTR 30.0%
! TGGAAGTTTCCATATGTTTT+CGG - Chr8:57584633-57584652 None:intergenic 30.0%
! TGGATACACTTTTACCAAAA+TGG + Chr8:57583436-57583455 MsG0880045329.01.T01:intron 30.0%
! TTATCCTTTGGTTTCCATAT+TGG + Chr8:57586788-57586807 MsG0880045329.01.T01:three_prime_UTR 30.0%
! TTCGCAATTTTCCTAAAACA+TGG - Chr8:57583734-57583753 None:intergenic 30.0%
! TTCTTTCCATTGTGTAGTTT+TGG + Chr8:57581185-57581204 MsG0880045329.01.T01:intron 30.0%
! TTGGTAAAAGTGTATCCAAT+TGG - Chr8:57583434-57583453 None:intergenic 30.0%
! TTGTTTCTTGTACGAATTAG+AGG + Chr8:57580884-57580903 MsG0880045329.01.T01:intron 30.0%
! TTTTCCAAGTACAAGTTTGA+AGG + Chr8:57586727-57586746 MsG0880045329.01.T01:three_prime_UTR 30.0%
!! AAACTCGATTTTAACAACCT+TGG - Chr8:57586160-57586179 None:intergenic 30.0%
!! AAATTGCGAAGCCATTTTAT+TGG + Chr8:57583744-57583763 MsG0880045329.01.T01:intron 30.0%
!! AACTCGATTTTAACAACCTT+GGG - Chr8:57586159-57586178 None:intergenic 30.0%
!! AGACTTTTGATTCTGTAGTA+AGG + Chr8:57582739-57582758 MsG0880045329.01.T01:intron 30.0%
!! ATTGGTGGGTATTGATATAT+CGG + Chr8:57584984-57585003 MsG0880045329.01.T01:three_prime_UTR 30.0%
!! CAATACAAGATATTTTGGGT+GGG + Chr8:57581755-57581774 MsG0880045329.01.T01:CDS 30.0%
!!! TGCATGCCATTTTGTTATAA+TGG + Chr8:57586655-57586674 MsG0880045329.01.T01:three_prime_UTR 30.0%
!!! TTCACTTTGAGAGTGTTTTT+TGG + Chr8:57585860-57585879 MsG0880045329.01.T01:intron 30.0%
!!! TTGTGTAGTTTTGGTTATAC+CGG + Chr8:57581194-57581213 MsG0880045329.01.T01:intron 30.0%
AAAAACCACACCGAATAAAC+AGG + Chr8:57580257-57580276 MsG0880045329.01.T01:five_prime_UTR 35.0%
AAAAACTCACATGAGAGGAT+TGG - Chr8:57583988-57584007 None:intergenic 35.0%
AAATGACCATACCCAACAAA+GGG - Chr8:57581524-57581543 None:intergenic 35.0%
AAATTACCCTTTGTTGGGTA+TGG + Chr8:57581515-57581534 MsG0880045329.01.T01:intron 35.0%
AACACTACTTCTTAGAACCA+TGG - Chr8:57583852-57583871 None:intergenic 35.0%
AACTGAAAAACTCACATGAG+AGG - Chr8:57583993-57584012 None:intergenic 35.0%
AAGACCATAGAGGAAAAAAG+AGG - Chr8:57581388-57581407 None:intergenic 35.0%
AATATATTGGACCTTCCACT+TGG - Chr8:57584917-57584936 None:intergenic 35.0%
ACACTACTTCTTAGAACCAT+GGG - Chr8:57583851-57583870 None:intergenic 35.0%
ACAGTCTATATGTATACTGC+TGG + Chr8:57581974-57581993 MsG0880045329.01.T01:three_prime_UTR 35.0%
ACATATGGAAACTTCCATTG+AGG + Chr8:57584636-57584655 MsG0880045329.01.T01:intron 35.0%
ACATCATGGTAGATTGACAT+CGG + Chr8:57586268-57586287 MsG0880045329.01.T01:intron 35.0%
AGACCATAGAGGAAAAAAGA+GGG - Chr8:57581387-57581406 None:intergenic 35.0%
AGCTTCCAAACACTTGATAA+AGG - Chr8:57583533-57583552 None:intergenic 35.0%
AGGTAGAAATCTTGATAGAC+AGG - Chr8:57580445-57580464 None:intergenic 35.0%
AGTAGTGTTGTATTATACCC+TGG + Chr8:57583831-57583850 MsG0880045329.01.T01:intron 35.0%
ATCTCCAATATGGAAACCAA+AGG - Chr8:57586795-57586814 None:intergenic 35.0%
ATGCACATAAAAACGTTTGG+AGG - Chr8:57586466-57586485 None:intergenic 35.0%
ATGCCTAAATTACCCTTTGT+TGG + Chr8:57581509-57581528 MsG0880045329.01.T01:intron 35.0%
ATGTGACCTTATGACATTTC+AGG + Chr8:57581939-57581958 MsG0880045329.01.T01:intron 35.0%
ATGTTCATTCAAATTGGAGG+AGG + Chr8:57586510-57586529 MsG0880045329.01.T01:three_prime_UTR 35.0%
ATTTGAATGTAAATGGCACC+AGG + Chr8:57584269-57584288 MsG0880045329.01.T01:intron 35.0%
CAAAAATCATTCGTGTAAGG+AGG - Chr8:57586020-57586039 None:intergenic 35.0%
CATTTGAAAATGGTTGACAG+TGG - Chr8:57586493-57586512 None:intergenic 35.0%
CCACCCAAAATATCTTGTAT+TGG - Chr8:57581757-57581776 None:intergenic 35.0%
CGACAATTTGATCTCCAATA+TGG - Chr8:57586805-57586824 None:intergenic 35.0%
CGTTTATTCTGCAGATGAAT+TGG + Chr8:57586437-57586456 MsG0880045329.01.T01:intron 35.0%
CTGCAAATTTCATTCACTTC+AGG - Chr8:57581568-57581587 None:intergenic 35.0%
GAAGCTTATTACTATAGTGG+TGG + Chr8:57583547-57583566 MsG0880045329.01.T01:intron 35.0%
GAGTCTTGATGGAAAACAAA+AGG + Chr8:57582355-57582374 MsG0880045329.01.T01:intron 35.0%
GATGTGTAGTAAGACTAGAT+GGG + Chr8:57582610-57582629 MsG0880045329.01.T01:intron 35.0%
GCGACTGCATAAATTCTAAT+TGG - Chr8:57585432-57585451 None:intergenic 35.0%
GGATTCGAGAATATAGACTA+CGG + Chr8:57586548-57586567 MsG0880045329.01.T01:three_prime_UTR 35.0%
GGGAAAATGTCTAAATACAG+TGG + Chr8:57583078-57583097 MsG0880045329.01.T01:three_prime_UTR 35.0%
GGTAGAAATCTTGATAGACA+GGG - Chr8:57580444-57580463 None:intergenic 35.0%
GTAGTGTTGTATTATACCCA+TGG + Chr8:57583832-57583851 MsG0880045329.01.T01:intron 35.0%
GTCAATTAAGAAGTGAGACT+CGG + Chr8:57585770-57585789 MsG0880045329.01.T01:intron 35.0%
GTCGAATCTCTTGTTAGATT+AGG + Chr8:57582576-57582595 MsG0880045329.01.T01:intron 35.0%
GTGGCAAGAAGATTGATATT+TGG + Chr8:57581591-57581610 MsG0880045329.01.T01:CDS 35.0%
GTGTAACTTATGATGAACCT+TGG + Chr8:57581727-57581746 MsG0880045329.01.T01:CDS 35.0%
GTTAAACAAATCCAAGCAAG+AGG + Chr8:57585013-57585032 MsG0880045329.01.T01:three_prime_UTR 35.0%
GTTCAGATTAGAATCTCCAT+AGG - Chr8:57583908-57583927 None:intergenic 35.0%
GTTTGACCTGTGAAAAATCA+AGG + Chr8:57584540-57584559 MsG0880045329.01.T01:intron 35.0%
TAAAATGAGAGGGTTGTGTT+AGG + Chr8:57582529-57582548 MsG0880045329.01.T01:intron 35.0%
TAAATGACCATACCCAACAA+AGG - Chr8:57581525-57581544 None:intergenic 35.0%
TACCAAAATGGTAGATGTAC+TGG + Chr8:57583448-57583467 MsG0880045329.01.T01:intron 35.0%
TACCCAACAAAGGGTAATTT+AGG - Chr8:57581515-57581534 None:intergenic 35.0%
TACTCCAAAGAATCCAGAAT+GGG - Chr8:57583176-57583195 None:intergenic 35.0%
TAGTGCCTTTATCAAGTGTT+TGG + Chr8:57583525-57583544 MsG0880045329.01.T01:intron 35.0%
TCAATTAAGAAGTGAGACTC+GGG + Chr8:57585771-57585790 MsG0880045329.01.T01:intron 35.0%
TCACTTCTTAATTGACAGAC+TGG - Chr8:57585766-57585785 None:intergenic 35.0%
TCTCTGGTACTTATTGTAAC+TGG - Chr8:57583701-57583720 None:intergenic 35.0%
TGATGTGTAGTAAGACTAGA+TGG + Chr8:57582609-57582628 MsG0880045329.01.T01:intron 35.0%
TGCCTAAATTACCCTTTGTT+GGG + Chr8:57581510-57581529 MsG0880045329.01.T01:intron 35.0%
TGTTCATTCAAATTGGAGGA+GGG + Chr8:57586511-57586530 MsG0880045329.01.T01:three_prime_UTR 35.0%
TTTCTTGTACGAATTAGAGG+TGG + Chr8:57580887-57580906 MsG0880045329.01.T01:intron 35.0%
! AACACCATTTGGATTTTGGA+CGG - Chr8:57584350-57584369 None:intergenic 35.0%
! AACCAGTACATCTACCATTT+TGG - Chr8:57583453-57583472 None:intergenic 35.0%
! ACATGGAGATATTTTCTCTC+TGG - Chr8:57583717-57583736 None:intergenic 35.0%
! ATGTCTTTGATCAGAAGTGT+CGG + Chr8:57581334-57581353 MsG0880045329.01.T01:intron 35.0%
! GATTCGACAAAGTTTTACGT+TGG - Chr8:57582564-57582583 None:intergenic 35.0%
! GTATTATACCCTGGTTCTTA+TGG + Chr8:57583872-57583891 MsG0880045329.01.T01:intron 35.0%
! TCTGAACTGTTTAGGAGTTT+TGG + Chr8:57583921-57583940 MsG0880045329.01.T01:intron 35.0%
!! ATTATTGGTGTTGATGTGTC+AGG - Chr8:57581227-57581246 None:intergenic 35.0%
!! CCAATACAAGATATTTTGGG+TGG + Chr8:57581754-57581773 MsG0880045329.01.T01:CDS 35.0%
!! TTATTGGTGTTGATGTGTCA+GGG - Chr8:57581226-57581245 None:intergenic 35.0%
!! TTTAACTTGCTGAGTCTTGA+TGG + Chr8:57582344-57582363 MsG0880045329.01.T01:intron 35.0%
!! TTTTGTGCTAGCTTACATCA+TGG + Chr8:57586254-57586273 MsG0880045329.01.T01:intron 35.0%
!!! AGGAGTTTTGGAAAATCTAC+TGG + Chr8:57583933-57583952 MsG0880045329.01.T01:intron 35.0%
!!! GAGTTTTGGAAAATCTACTG+GGG + Chr8:57583935-57583954 MsG0880045329.01.T01:intron 35.0%
!!! GGAGTTTTGGAAAATCTACT+GGG + Chr8:57583934-57583953 MsG0880045329.01.T01:intron 35.0%
AAAATAGGCTTCGGTGGTTT+GGG + Chr8:57582704-57582723 MsG0880045329.01.T01:intron 40.0%
AACCTCACTCTTTCAGAATC+AGG - Chr8:57580858-57580877 None:intergenic 40.0%
AACTCTCTCTCTCTCTCTAA+TGG - Chr8:57582654-57582673 None:intergenic 40.0%
AATGAATGATGAGGCCTTGA+GGG - Chr8:57586703-57586722 None:intergenic 40.0%
ACTACCCATTCTGGATTCTT+TGG + Chr8:57583169-57583188 MsG0880045329.01.T01:three_prime_UTR 40.0%
AGTAAGGAGAGTAGATCAGA+TGG + Chr8:57582755-57582774 MsG0880045329.01.T01:intron 40.0%
ATAGTCTTCTATACTGCTGC+TGG + Chr8:57584949-57584968 MsG0880045329.01.T01:three_prime_UTR 40.0%
ATTAGAGAGAGAGAGAGAGT+TGG + Chr8:57582653-57582672 MsG0880045329.01.T01:intron 40.0%
CAAAGATTGATAAGGAAGCC+AGG - Chr8:57585081-57585100 None:intergenic 40.0%
CAACACAATGAGAATGACAG+TGG - Chr8:57582083-57582102 None:intergenic 40.0%
CAGTCCTTCAAACTTGTACT+TGG - Chr8:57586734-57586753 None:intergenic 40.0%
CGAAGAGGAATCTATCAAGA+AGG - Chr8:57580507-57580526 None:intergenic 40.0%
CTTCTGATAGAAAACGTCTC+TGG + Chr8:57580608-57580627 MsG0880045329.01.T01:intron 40.0%
GAATCGGTCAATGAAATCCA+TGG - Chr8:57580392-57580411 None:intergenic 40.0%
GACCATAGAGGAAAAAAGAG+GGG - Chr8:57581386-57581405 None:intergenic 40.0%
GCAGAATAAACGCATTTCTG+AGG - Chr8:57586429-57586448 None:intergenic 40.0%
GTACTCCAAAGAATCCAGAA+TGG - Chr8:57583177-57583196 None:intergenic 40.0%
GTAGTAAGACTAGATGGGAT+AGG + Chr8:57582615-57582634 MsG0880045329.01.T01:intron 40.0%
GTCATATGCCATAAGAACCA+GGG - Chr8:57583883-57583902 None:intergenic 40.0%
TCCAGAATGGGTAGTAAATG+AGG - Chr8:57583164-57583183 None:intergenic 40.0%
TCTATCAAGAAGGAAGCGAA+TGG - Chr8:57580497-57580516 None:intergenic 40.0%
TCTTGATAGATTCCTCTTCG+AGG + Chr8:57580507-57580526 MsG0880045329.01.T01:CDS 40.0%
TGCTCAACTGGTTGTTTGAT+TGG + Chr8:57584318-57584337 MsG0880045329.01.T01:intron 40.0%
TTAGAGAGAGAGAGAGAGTT+GGG + Chr8:57582654-57582673 MsG0880045329.01.T01:intron 40.0%
TTATGGCATATGACGTCCTA+TGG + Chr8:57583889-57583908 MsG0880045329.01.T01:intron 40.0%
! ACACCATTTGGATTTTGGAC+GGG - Chr8:57584349-57584368 None:intergenic 40.0%
! AGACTACGGAGCTGATTTAA+AGG + Chr8:57586562-57586581 MsG0880045329.01.T01:three_prime_UTR 40.0%
! ATGTATTGGGGGTACAACAA+TGG + Chr8:57583578-57583597 MsG0880045329.01.T01:intron 40.0%
! CAAAGGTGAGTTGAAAGTAG+TGG + Chr8:57585623-57585642 MsG0880045329.01.T01:intron 40.0%
! CACTAAGTTTTCCTCTTGCT+TGG - Chr8:57585027-57585046 None:intergenic 40.0%
! GACTACGGAGCTGATTTAAA+GGG + Chr8:57586563-57586582 MsG0880045329.01.T01:three_prime_UTR 40.0%
! GCTTGAATATTTTCCCCTCA+AGG + Chr8:57586686-57586705 MsG0880045329.01.T01:three_prime_UTR 40.0%
! TTTTGCATGTGAGTCTCTGT+TGG - Chr8:57582403-57582422 None:intergenic 40.0%
! TTTTGTGAAGATGTAGACGG+TGG - Chr8:57581078-57581097 None:intergenic 40.0%
!! AAGTTTTACGTTGGCTGTTG+AGG - Chr8:57582555-57582574 None:intergenic 40.0%
!! ACAAATTGGCTTTGCTCAAC+TGG + Chr8:57584306-57584325 MsG0880045329.01.T01:intron 40.0%
!! ACAAGATATTTTGGGTGGGA+CGG + Chr8:57581759-57581778 MsG0880045329.01.T01:CDS 40.0%
!! GCGAAGCCATTTTATTGGTA+TGG + Chr8:57583749-57583768 MsG0880045329.01.T01:intron 40.0%
!! TCTGGATTCTTTGGAGTACA+AGG + Chr8:57583178-57583197 MsG0880045329.01.T01:three_prime_UTR 40.0%
!! TTGGTGCTTTTCCTTATCCA+AGG - Chr8:57584898-57584917 None:intergenic 40.0%
!!! GGCACCAGGTTTTATTGATA+AGG + Chr8:57584283-57584302 MsG0880045329.01.T01:intron 40.0%
AAGGAGAGTAGATCAGATGG+AGG + Chr8:57582758-57582777 MsG0880045329.01.T01:intron 45.0%
AGAGAGCGAAGAAAGGAAGA+AGG - Chr8:57580465-57580484 None:intergenic 45.0%
AGTGACGTGTTTCTCGAGAT+AGG + Chr8:57583057-57583076 MsG0880045329.01.T01:three_prime_UTR 45.0%
AGTTCTGCTCACCTTGGATA+AGG + Chr8:57584884-57584903 MsG0880045329.01.T01:three_prime_UTR 45.0%
ATGAATGATGAGGCCTTGAG+GGG - Chr8:57586702-57586721 None:intergenic 45.0%
ATGTAGCCGATCTCACTTAG+GGG + Chr8:57582896-57582915 MsG0880045329.01.T01:intron 45.0%
ATGTGGAAAATAGGCTTCGG+TGG + Chr8:57582698-57582717 MsG0880045329.01.T01:intron 45.0%
CAAGAAGGAAGCGAATGGAA+GGG - Chr8:57580492-57580511 None:intergenic 45.0%
CACTGACACGTGTCAAACAT+CGG + Chr8:57581309-57581328 MsG0880045329.01.T01:intron 45.0%
CATGTAGCCGATCTCACTTA+GGG + Chr8:57582895-57582914 MsG0880045329.01.T01:intron 45.0%
CCTTATCCCCTAAGTGAGAT+CGG - Chr8:57582905-57582924 None:intergenic 45.0%
CGTCATATGCCATAAGAACC+AGG - Chr8:57583884-57583903 None:intergenic 45.0%
CTATGAAGTTCTGCTCACCT+TGG + Chr8:57584878-57584897 MsG0880045329.01.T01:three_prime_UTR 45.0%
CTTAGTGAAGACGTTCGATC+TGG + Chr8:57585040-57585059 MsG0880045329.01.T01:three_prime_UTR 45.0%
CTTGTACGAATTAGAGGTGG+TGG + Chr8:57580890-57580909 MsG0880045329.01.T01:intron 45.0%
GAAAATAGGCTTCGGTGGTT+TGG + Chr8:57582703-57582722 MsG0880045329.01.T01:intron 45.0%
GAATGAATGATGAGGCCTTG+AGG - Chr8:57586704-57586723 None:intergenic 45.0%
GAGAGTAAGAGGGGTTTGTA+GGG + Chr8:57585812-57585831 MsG0880045329.01.T01:intron 45.0%
GAGGAAAAAAGAGGGGCAAA+AGG - Chr8:57581379-57581398 None:intergenic 45.0%
GAGGATTGTCAGATCACAAG+AGG + Chr8:57582777-57582796 MsG0880045329.01.T01:intron 45.0%
GATCCCGTCCAAAATCCAAA+TGG + Chr8:57584343-57584362 MsG0880045329.01.T01:intron 45.0%
GCCTCATTTACTACCCATTC+TGG + Chr8:57583160-57583179 MsG0880045329.01.T01:three_prime_UTR 45.0%
GTGACGTGTTTCTCGAGATA+GGG + Chr8:57583058-57583077 MsG0880045329.01.T01:three_prime_UTR 45.0%
TACGTAACTCATAACCAGCG+AGG - Chr8:57582311-57582330 None:intergenic 45.0%
TAGAAAACGTCTCTGGTGTC+TGG + Chr8:57580615-57580634 MsG0880045329.01.T01:intron 45.0%
TAGAGAGAGAGAGAGAGTTG+GGG + Chr8:57582655-57582674 MsG0880045329.01.T01:intron 45.0%
TAGAGTGACTAACCTCGAAG+AGG - Chr8:57580522-57580541 None:intergenic 45.0%
TCAAGAAGGAAGCGAATGGA+AGG - Chr8:57580493-57580512 None:intergenic 45.0%
TCATGGTAGATTGACATCGG+AGG + Chr8:57586271-57586290 MsG0880045329.01.T01:intron 45.0%
TGCAAAAACACACACCTGAG+AGG + Chr8:57582416-57582435 MsG0880045329.01.T01:intron 45.0%
TGTCAGATCACAAGAGGTAG+AGG + Chr8:57582783-57582802 MsG0880045329.01.T01:intron 45.0%
! ACAACCCTCTCATTTTACCC+GGG - Chr8:57582526-57582545 None:intergenic 45.0%
! CACAACCCTCTCATTTTACC+CGG - Chr8:57582527-57582546 None:intergenic 45.0%
! CACCTGATTCTGAAAGAGTG+AGG + Chr8:57580853-57580872 MsG0880045329.01.T01:intron 45.0%
! GTTGCCTTGCTATACATAGC+CGG + Chr8:57582493-57582512 MsG0880045329.01.T01:intron 45.0%
! TACATTCAGGTTTGCTCGTG+TGG + Chr8:57583006-57583025 MsG0880045329.01.T01:intron 45.0%
! TCTGTCCTGTTTATTCGGTG+TGG - Chr8:57580265-57580284 None:intergenic 45.0%
! TGGTAAGTTGAATGTCTGCC+TGG + Chr8:57585060-57585079 MsG0880045329.01.T01:intron 45.0%
!! AAGATATTTTGGGTGGGACG+GGG + Chr8:57581761-57581780 MsG0880045329.01.T01:CDS 45.0%
!! AAGGAAAAGCACCAAGTGGA+AGG + Chr8:57584903-57584922 MsG0880045329.01.T01:three_prime_UTR 45.0%
!! ATCAGAAGTGTCGGTGTTTC+TGG + Chr8:57581343-57581362 MsG0880045329.01.T01:intron 45.0%
!! ATTTTGGGAAACAAGGCGCT+CGG + Chr8:57582027-57582046 MsG0880045329.01.T01:three_prime_UTR 45.0%
!! CAAGATATTTTGGGTGGGAC+GGG + Chr8:57581760-57581779 MsG0880045329.01.T01:CDS 45.0%
!! CTTTTTCACATAGACCTCGC+TGG + Chr8:57582294-57582313 MsG0880045329.01.T01:intron 45.0%
!! GGATAAGGAAAAGCACCAAG+TGG + Chr8:57584899-57584918 MsG0880045329.01.T01:three_prime_UTR 45.0%
!! TCAGAAGTGTCGGTGTTTCT+GGG + Chr8:57581344-57581363 MsG0880045329.01.T01:intron 45.0%
!!! GGAGTTTTGGAGAGTAAGAG+GGG + Chr8:57585803-57585822 MsG0880045329.01.T01:intron 45.0%
!!! GGGAGTTTTGGAGAGTAAGA+GGG + Chr8:57585802-57585821 MsG0880045329.01.T01:intron 45.0%
!!! TGCCCCTCTTTTTTCCTCTA+TGG + Chr8:57581381-57581400 MsG0880045329.01.T01:intron 45.0%
!!! TGGGAGTTTTGGAGAGTAAG+AGG + Chr8:57585801-57585820 MsG0880045329.01.T01:intron 45.0%
!! TTGAATATATAATAATATAT+TGG - Chr8:57584930-57584949 None:intergenic 5.0%
!!! AATTTTTTAAAAATCATTAT+TGG - Chr8:57581242-57581261 None:intergenic 5.0%
AGTAAGAGGGGTTTGTAGGG+AGG + Chr8:57585815-57585834 MsG0880045329.01.T01:intron 50.0%
AGTGAGACTCGGGTTCTGTT+TGG + Chr8:57585781-57585800 MsG0880045329.01.T01:intron 50.0%
CAAGCCCGGGTAAAATGAGA+GGG + Chr8:57582519-57582538 MsG0880045329.01.T01:intron 50.0%
CCATGTAGCCGATCTCACTT+AGG + Chr8:57582894-57582913 MsG0880045329.01.T01:intron 50.0%
CCGATCTCACTTAGGGGATA+AGG + Chr8:57582902-57582921 MsG0880045329.01.T01:intron 50.0%
CCTAAGTGAGATCGGCTACA+TGG - Chr8:57582897-57582916 None:intergenic 50.0%
CTCACTTAGGGGATAAGGCA+TGG + Chr8:57582907-57582926 MsG0880045329.01.T01:intron 50.0%
GGAGAGTAAGAGGGGTTTGT+AGG + Chr8:57585811-57585830 MsG0880045329.01.T01:intron 50.0%
GGGAAGAAGAGAGCGAAGAA+AGG - Chr8:57580472-57580491 None:intergenic 50.0%
GTGAAGATGTAGACGGTGGT+AGG - Chr8:57581074-57581093 None:intergenic 50.0%
GTGAGACTCGGGTTCTGTTT+GGG + Chr8:57585782-57585801 MsG0880045329.01.T01:intron 50.0%
TATGCAGCACCACAACGTTC+AGG + Chr8:57586627-57586646 MsG0880045329.01.T01:three_prime_UTR 50.0%
TGATGTGTCAGGGTCATGTC+CGG - Chr8:57581216-57581235 None:intergenic 50.0%
! AAACAAGGCGCTCGGACTTT+GGG + Chr8:57582035-57582054 MsG0880045329.01.T01:three_prime_UTR 50.0%
! AAGGATGGAGTGTCCACATG+AGG - Chr8:57586962-57586981 None:intergenic 50.0%
! CGGGTTCTGTTTGGGAGTTT+TGG + Chr8:57585790-57585809 MsG0880045329.01.T01:intron 50.0%
! CTCTCATTTTACCCGGGCTT+GGG - Chr8:57582520-57582539 None:intergenic 50.0%
AGGGGTTTGTAGGGAGGTGA+GGG + Chr8:57585821-57585840 MsG0880045329.01.T01:intron 55.0%
CCAAGCCCGGGTAAAATGAG+AGG + Chr8:57582518-57582537 MsG0880045329.01.T01:intron 55.0%
GGACTTGGAAACATCCCGTG+AGG - Chr8:57584709-57584728 None:intergenic 55.0%
GGGACCGGCTATGTATAGCA+AGG - Chr8:57582500-57582519 None:intergenic 55.0%
TGCAGCAGACCTGAACGTTG+TGG - Chr8:57586639-57586658 None:intergenic 55.0%
! AACAAGGCGCTCGGACTTTG+GGG + Chr8:57582036-57582055 MsG0880045329.01.T01:three_prime_UTR 55.0%
! ATTTTACCCGGGCTTGGGAC+CGG - Chr8:57582515-57582534 None:intergenic 55.0%
! CCTCTCATTTTACCCGGGCT+TGG - Chr8:57582521-57582540 None:intergenic 55.0%
! GAAACAAGGCGCTCGGACTT+TGG + Chr8:57582034-57582053 MsG0880045329.01.T01:three_prime_UTR 55.0%
AGTGTCCACATGAGGCTCCG+TGG - Chr8:57586954-57586973 None:intergenic 60.0%
GAGCACTCTCACTGCCTCTC+AGG - Chr8:57582433-57582452 None:intergenic 60.0%
GAGGGGTTTGTAGGGAGGTG+AGG + Chr8:57585820-57585839 MsG0880045329.01.T01:intron 60.0%
GTGTCCACATGAGGCTCCGT+GGG - Chr8:57586953-57586972 None:intergenic 60.0%
TACATAGCCGGTCCCAAGCC+CGG + Chr8:57582505-57582524 MsG0880045329.01.T01:intron 60.0%
ACATAGCCGGTCCCAAGCCC+GGG + Chr8:57582506-57582525 MsG0880045329.01.T01:intron 65.0%
CAGACCCACGGAGCCTCATG+TGG + Chr8:57586946-57586965 MsG0880045329.01.T01:three_prime_UTR 65.0%
TTTGGGTGGGACGGGGAGTC+AGG + Chr8:57581768-57581787 MsG0880045329.01.T01:CDS 65.0%
GTGGGACGGGGAGTCAGGTC+TGG + Chr8:57581773-57581792 MsG0880045329.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 57580248 57586993 57580248 ID=MsG0880045329.01;Name=MsG0880045329.01
Chr8 mRNA 57580248 57586993 57580248 ID=MsG0880045329.01.T01;Parent=MsG0880045329.01;Name=MsG0880045329.01.T01;_AED=0.35;_eAED=0.35;_QI=143|1|1|1|0|0|7|1133|120
Chr8 exon 57580248 57580528 57580248 ID=MsG0880045329.01.T01:exon:24542;Parent=MsG0880045329.01.T01
Chr8 exon 57581588 57581812 57581588 ID=MsG0880045329.01.T01:exon:24543;Parent=MsG0880045329.01.T01
Chr8 exon 57581961 57582116 57581961 ID=MsG0880045329.01.T01:exon:24544;Parent=MsG0880045329.01.T01
Chr8 exon 57583015 57583199 57583015 ID=MsG0880045329.01.T01:exon:24545;Parent=MsG0880045329.01.T01
Chr8 exon 57584878 57585061 57584878 ID=MsG0880045329.01.T01:exon:24546;Parent=MsG0880045329.01.T01
Chr8 exon 57585563 57585627 57585563 ID=MsG0880045329.01.T01:exon:24547;Parent=MsG0880045329.01.T01
Chr8 exon 57586451 57586993 57586451 ID=MsG0880045329.01.T01:exon:24548;Parent=MsG0880045329.01.T01
Chr8 five_prime_UTR 57580248 57580390 57580248 ID=MsG0880045329.01.T01:five_prime_utr;Parent=MsG0880045329.01.T01
Chr8 CDS 57580391 57580528 57580391 ID=MsG0880045329.01.T01:cds;Parent=MsG0880045329.01.T01
Chr8 CDS 57581588 57581812 57581588 ID=MsG0880045329.01.T01:cds;Parent=MsG0880045329.01.T01
Chr8 three_prime_UTR 57581961 57582116 57581961 ID=MsG0880045329.01.T01:three_prime_utr;Parent=MsG0880045329.01.T01
Chr8 three_prime_UTR 57583015 57583199 57583015 ID=MsG0880045329.01.T01:three_prime_utr;Parent=MsG0880045329.01.T01
Chr8 three_prime_UTR 57584878 57585061 57584878 ID=MsG0880045329.01.T01:three_prime_utr;Parent=MsG0880045329.01.T01
Chr8 three_prime_UTR 57585563 57585627 57585563 ID=MsG0880045329.01.T01:three_prime_utr;Parent=MsG0880045329.01.T01
Chr8 three_prime_UTR 57586451 57586993 57586451 ID=MsG0880045329.01.T01:three_prime_utr;Parent=MsG0880045329.01.T01
Gene Sequence

>MsG0880045329.01.T01

ATGGATTTCATTGACCGATTCAATTCCATTGACTTTCATCATGAATCTTACCCTGTCTATCAAGATTTCTACCTTCTTCCTTTCTTCGCTCTCTTCTTCCCTTCCATTCGCTTCCTTCTTGATAGATTCCTCTTCGAGAAAGTGGCAAGAAGATTGATATTTGGAAAGGGGAATGAGAAGCTTGACTATCAAACAGATGATAGAAGAAAGAGGATTAATAAATTTAAGGAATCAGCTTGGAAATGTATTTATTATCTTTCAGCTGATGTTCTTGTCTGTGTAACTTATGATGAACCTTGGTTTACCAATACAAGATATTTTGGGTGGGACGGGGAGTCAGGTCTGGCCAGATCAAAAAATTAA

Protein sequence

>MsG0880045329.01.T01

MDFIDRFNSIDFHHESYPVYQDFYLLPFFALFFPSIRFLLDRFLFEKVARRLIFGKGNEKLDYQTDDRRKRINKFKESAWKCIYYLSADVLVCVTYDEPWFTNTRYFGWDGESGLARSKN*