AlfalfaGEDB | MsG0180000205.01

M. sativa cultivar ZhongmuNo.1 / MsG0180000205.01

KEGG: -
GO: GO:0003677
PFAM: PF02362

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000205.01.T01	XP_024636626.1	76.752	314	8	4	7	297	1	272	1.17E-160	458

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000205.01.T01	Q8RYD1	52.518	139	51	4	14	151	11	135	5.18E-39	142

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000205.01.T01	A0A396JGK5	76.752	314	8	4	7	297	1	272	5.61e-161	458

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047791.01	MsG0180000205.01	0.820950	5.232031e-53	4.199503e-50
MsG0080048152.01	MsG0180000205.01	0.831517	1.596313e-55	1.736409e-52
MsG0180000155.01	MsG0180000205.01	0.813836	2.092363e-51	1.381193e-48
MsG0180000205.01	MsG0180000210.01	0.822575	2.201244e-53	1.849850e-50
MsG0180000205.01	MsG0180000568.01	0.808454	3.073144e-50	1.757947e-47
MsG0180000205.01	MsG0180000790.01	0.801539	8.582894e-49	4.109342e-46
MsG0180000205.01	MsG0180000982.01	0.860279	2.307889e-63	6.273907e-60
MsG0180000205.01	MsG0180001118.01	0.817904	2.588162e-52	1.909022e-49
MsG0180000205.01	MsG0180001886.01	0.814407	1.565039e-51	1.049302e-48
MsG0180000205.01	MsG0180002547.01	0.809915	1.494429e-50	8.885661e-48
MsG0180000205.01	MsG0180002794.01	0.804261	2.351928e-49	1.207113e-46
MsG0180000205.01	MsG0180003548.01	0.803767	2.979037e-49	1.509751e-46
MsG0180000205.01	MsG0180003572.01	0.821523	3.858915e-53	3.146801e-50
MsG0180000205.01	MsG0180003741.01	0.817289	3.562673e-52	2.583878e-49
MsG0180000205.01	MsG0180004725.01	0.810187	1.305778e-50	7.818821e-48
MsG0180000205.01	MsG0180004861.01	0.828886	7.007209e-55	7.055432e-52
MsG0180000205.01	MsG0280006483.01	0.810780	9.721808e-51	5.914061e-48
MsG0180000205.01	MsG0280006593.01	0.813083	3.063200e-51	1.981046e-48
MsG0180000205.01	MsG0280007847.01	0.834681	2.603836e-56	3.112211e-53
MsG0180000205.01	MsG0280008429.01	0.826436	2.715982e-54	2.547005e-51
MsG0180000205.01	MsG0280008936.01	0.813970	1.954751e-51	1.295059e-48
MsG0180000205.01	MsG0280009575.01	0.806970	6.351032e-50	3.494648e-47
MsG0180000205.01	MsG0280010595.01	0.811134	8.148796e-51	5.003934e-48
MsG0180000205.01	MsG0380011581.01	0.812386	4.351498e-51	2.762929e-48
MsG0180000205.01	MsG0380012570.01	0.829414	5.216986e-55	5.335869e-52
MsG0180000205.01	MsG0380013085.01	0.806465	8.119540e-50	4.410187e-47
MsG0180000205.01	MsG0380014875.01	0.801118	1.047079e-48	4.960393e-46
MsG0180000205.01	MsG0380015027.01	0.800645	1.307514e-48	6.120277e-46
MsG0180000205.01	MsG0380016067.01	0.823510	1.332639e-53	1.149789e-50
MsG0180000205.01	MsG0380016133.01	0.831975	1.230235e-55	1.356538e-52
MsG0180000205.01	MsG0380016559.01	0.807821	4.190610e-50	2.357476e-47
MsG0180000205.01	MsG0380016560.01	0.833173	6.207497e-56	7.092578e-53
MsG0180000205.01	MsG0380016860.01	0.822343	2.491830e-53	2.080107e-50
MsG0180000205.01	MsG0380016970.01	0.811166	8.021690e-51	4.929792e-48
MsG0180000205.01	MsG0380018033.01	0.822719	2.037575e-53	1.719211e-50
MsG0180000205.01	MsG0380018044.01	0.824594	7.416234e-54	6.599419e-51
MsG0180000205.01	MsG0480021706.01	0.824926	6.195633e-54	5.565864e-51
MsG0180000205.01	MsG0480021735.01	0.810736	9.939459e-51	6.039310e-48
MsG0180000205.01	MsG0480022223.01	0.840194	1.006783e-57	1.423365e-54
MsG0180000205.01	MsG0480022672.01	0.839775	1.295055e-57	1.806986e-54
MsG0180000205.01	MsG0480022696.01	0.800168	1.635607e-48	7.563634e-46
MsG0180000205.01	MsG0480023356.01	0.840197	1.005260e-57	1.421349e-54
MsG0180000205.01	MsG0480023994.01	0.807053	6.098943e-50	3.363177e-47
MsG0180000205.01	MsG0580024051.01	0.813404	2.604042e-51	1.699043e-48
MsG0180000205.01	MsG0580024185.01	0.809916	1.493496e-50	8.880466e-48
MsG0180000205.01	MsG0580024339.01	0.801905	7.221421e-49	3.489750e-46
MsG0180000205.01	MsG0580024619.01	0.819697	1.013684e-52	7.857108e-50
MsG0180000205.01	MsG0580024727.01	0.824651	7.191713e-54	6.410092e-51
MsG0180000205.01	MsG0580025268.01	0.827303	1.685397e-54	1.620782e-51
MsG0180000205.01	MsG0580025756.01	0.841730	3.980366e-58	5.901514e-55
MsG0180000205.01	MsG0580026137.01	0.801884	7.292690e-49	3.522470e-46
MsG0180000205.01	MsG0580026301.01	0.831982	1.225836e-55	1.351941e-52
MsG0180000205.01	MsG0580026439.01	0.816530	5.274687e-52	3.746901e-49
MsG0180000205.01	MsG0580026483.01	0.805315	1.416648e-49	7.471173e-47
MsG0180000205.01	MsG0580026485.01	0.872571	2.871816e-67	1.207690e-63
MsG0180000205.01	MsG0580026718.01	0.831899	1.285079e-55	1.413900e-52
MsG0180000205.01	MsG0580027605.01	0.803671	3.119507e-49	1.576965e-46
MsG0180000205.01	MsG0580027925.01	0.800803	1.213970e-48	5.705138e-46
MsG0180000205.01	MsG0580028582.01	0.803623	3.191630e-49	1.611498e-46
MsG0180000205.01	MsG0580028754.01	0.800720	1.262659e-48	5.921252e-46
MsG0180000205.01	MsG0580029924.01	0.815300	9.920660e-52	6.813825e-49
MsG0180000205.01	MsG0680030784.01	0.805717	1.166283e-49	6.215173e-47
MsG0180000205.01	MsG0680031000.01	0.816037	6.796862e-52	4.763862e-49
MsG0180000205.01	MsG0680031468.01	0.810983	8.786523e-51	5.374659e-48
MsG0180000205.01	MsG0680031628.01	0.812078	5.079617e-51	3.198485e-48
MsG0180000205.01	MsG0680034913.01	0.835315	1.802523e-56	2.196349e-53
MsG0180000205.01	MsG0680035577.01	0.800293	1.542787e-48	7.157424e-46
MsG0180000205.01	MsG0680035765.01	0.835758	1.392679e-56	1.719451e-53
MsG0180000205.01	MsG0680035888.01	0.805079	1.587019e-49	8.319203e-47
MsG0180000205.01	MsG0780036664.01	0.801653	8.133587e-49	3.905383e-46
MsG0180000205.01	MsG0780037124.01	0.815259	1.013255e-51	6.951379e-49
MsG0180000205.01	MsG0780038948.01	0.807821	4.190985e-50	2.357683e-47
MsG0180000205.01	MsG0780039439.01	0.805404	1.356838e-49	7.172224e-47
MsG0180000205.01	MsG0780040162.01	0.800750	1.244851e-48	5.842279e-46
MsG0180000205.01	MsG0780040545.01	0.815991	6.960050e-52	4.871900e-49
MsG0180000205.01	MsG0780041259.01	0.805639	1.211523e-49	6.442850e-47
MsG0180000205.01	MsG0780041268.01	0.859559	3.802540e-63	1.008407e-59
MsG0180000205.01	MsG0780041440.01	0.807894	4.044836e-50	2.279693e-47
MsG0180000205.01	MsG0880042033.01	0.807192	5.700585e-50	3.154855e-47
MsG0180000205.01	MsG0880042857.01	0.819121	1.371293e-52	1.046007e-49
MsG0180000205.01	MsG0880043521.01	0.806139	9.512005e-50	5.123674e-47
MsG0180000205.01	MsG0880043749.01	0.813304	2.738532e-51	1.781876e-48
MsG0180000205.01	MsG0880043816.01	0.802058	6.718125e-49	3.259165e-46
MsG0180000205.01	MsG0880044394.01	0.824296	8.718062e-54	7.690153e-51
MsG0180000205.01	MsG0880044728.01	0.803228	3.853898e-49	1.926194e-46
MsG0180000205.01	MsG0880044975.01	0.859558	3.805695e-63	1.009181e-59
MsG0180000205.01	MsG0880045613.01	0.813768	2.165813e-51	1.427017e-48
MsG0180000205.01	MsG0880045656.01	0.806202	9.225794e-50	4.977622e-47
MsG0180000205.01	MsG0880045684.01	0.817777	2.765088e-52	2.032552e-49
MsG0180000205.01	MsG0880045965.01	0.813007	3.182353e-51	2.054029e-48
MsG0180000205.01	MsG0880046517.01	0.801612	8.295859e-49	3.979035e-46
MsG0180000205.01	MsG0880047045.01	0.822851	1.898506e-53	1.607884e-50
MsG0180000205.01	MsG0880047046.01	0.800693	1.278806e-48	5.992919e-46
MsG0180000205.01	MsG0880047212.01	0.813042	3.126779e-51	2.020029e-48
MsG0180000205.01	MsG0880047764.01	0.802142	6.455274e-49	3.138315e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000205.01.T01	MTR_1g021440	60.687	262	70	5	11	251	6	255	1.29e-100	297
MsG0180000205.01.T01	MTR_1g021440	60.687	262	70	5	11	251	6	255	9.04e-99	296
MsG0180000205.01.T01	MTR_1g021440	55.290	293	83	7	11	276	6	277	1.52e-98	291
MsG0180000205.01.T01	MTR_1g021330	62.857	245	69	6	11	251	9	235	6.76e-97	290
MsG0180000205.01.T01	MTR_1g021440	55.290	293	83	7	11	276	6	277	9.74e-97	290
MsG0180000205.01.T01	MTR_1g021350	55.839	274	59	6	7	251	1	241	4.13e-90	272
MsG0180000205.01.T01	MTR_1g021400	56.929	267	81	6	11	267	13	255	2.58e-89	271
MsG0180000205.01.T01	MTR_1g021320	67.925	212	54	4	12	221	168	367	1.04e-86	276
MsG0180000205.01.T01	MTR_1g021320	71.176	170	37	2	8	176	5	163	2.31e-77	252
MsG0180000205.01.T01	MTR_1g021435	53.925	293	58	9	7	267	1	248	1.18e-84	259
MsG0180000205.01.T01	MTR_1g021410	58.848	243	73	5	11	251	6	223	2.14e-83	255
MsG0180000205.01.T01	MTR_1g021360	69.822	169	40	1	9	177	7	164	9.20e-77	242
MsG0180000205.01.T01	MTR_1g021360	47.636	275	88	6	8	276	164	388	8.28e-69	221
MsG0180000205.01.T01	MTR_1g021380	52.016	248	84	8	7	251	1	216	1.31e-71	225
MsG0180000205.01.T01	MTR_1g021500	49.632	272	71	7	8	243	7	248	1.48e-70	225
MsG0180000205.01.T01	MTR_1g021500	49.632	272	71	7	8	243	7	248	2.78e-70	225
MsG0180000205.01.T01	MTR_1g021290	68.310	142	34	1	12	153	12	142	5.02e-62	200
MsG0180000205.01.T01	MTR_1g021290	62.025	158	48	2	16	173	145	290	2.50e-59	193
MsG0180000205.01.T01	MTR_1g021270	38.372	86	52	1	54	139	31	115	2.60e-13	70.5
MsG0180000205.01.T01	MTR_7g050640	34.091	88	58	0	40	127	15	102	1.86e-12	63.5
MsG0180000205.01.T01	MTR_7g050710	36.709	79	50	0	54	132	29	107	4.60e-12	65.9
MsG0180000205.01.T01	MTR_3g098790	37.975	79	49	0	54	132	29	107	6.35e-12	65.5
MsG0180000205.01.T01	MTR_7g050580	37.975	79	49	0	54	132	29	107	9.15e-12	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000205.01.T01	AT4G33280	52.593	135	51	3	14	147	11	133	1.38e-40	142
MsG0180000205.01.T01	AT4G33280	52.518	139	51	4	14	151	11	135	5.28e-40	142
MsG0180000205.01.T01	AT4G33280	52.518	139	51	4	14	151	11	135	1.08e-39	143
MsG0180000205.01.T01	AT4G34400	40.000	85	51	0	51	135	28	112	1.85e-17	82.4
MsG0180000205.01.T01	AT4G34400	40.000	85	51	0	51	135	28	112	1.85e-17	82.4
MsG0180000205.01.T01	AT3G06220	28.182	110	71	2	54	163	25	126	1.44e-12	65.1
MsG0180000205.01.T01	AT3G18990	35.714	98	54	1	54	142	22	119	2.47e-12	67.0
MsG0180000205.01.T01	AT3G18990	35.714	98	54	1	54	142	22	119	3.11e-12	66.6
MsG0180000205.01.T01	AT3G06160	36.000	75	48	0	53	127	39	113	1.74e-11	64.3
MsG0180000205.01.T01	AT3G06160	36.000	75	48	0	53	127	24	98	2.13e-11	63.9
MsG0180000205.01.T01	AT3G06160	36.000	75	48	0	53	127	24	98	2.13e-11	63.9
MsG0180000205.01.T01	AT3G06160	36.000	75	48	0	53	127	24	98	2.13e-11	63.9
MsG0180000205.01.T01	AT3G06160	36.000	75	48	0	53	127	83	157	2.33e-11	64.3
MsG0180000205.01.T01	AT5G66980	41.772	79	42	1	53	127	24	102	2.56e-11	63.9
MsG0180000205.01.T01	AT5G60130	38.636	88	49	2	53	135	28	115	2.61e-11	62.8
MsG0180000205.01.T01	AT5G60130	38.636	88	49	2	53	135	2	89	5.33e-11	62.8
MsG0180000205.01.T01	AT5G60130	38.636	88	49	2	53	135	25	112	6.81e-11	62.4
MsG0180000205.01.T01	AT5G60130	38.636	88	49	2	53	135	28	115	7.38e-11	62.4
MsG0180000205.01.T01	AT5G60130	38.636	88	49	2	53	135	28	115	8.28e-11	62.0

Find 76 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAACTCCACTAGGACCTTTA+AGG	0.183323	1:+2841740	None:intergenic
CCTGAAAATGTGAACCTTAA+AGG	0.211774	1:-2841754	MsG0180000205.01.T01:CDS
TGAAATGGATGAACTGAAAA+TGG	0.224125	1:+2842520	None:intergenic
TTTGTCTCTCTGTTTCAAAA+TGG	0.253518	1:-2842583	MsG0180000205.01.T01:CDS
TGATTCGTGATTCGGAAAAT+AGG	0.283306	1:-2839472	MsG0180000205.01.T01:CDS
AGTGGAGTTGTGTGGAATAT+AGG	0.300231	1:-2841727	MsG0180000205.01.T01:CDS
AGGAGTTTGGCACCATTTCT+AGG	0.300433	1:+2838768	None:intergenic
CATAAACTATTTGAGGAGTT+TGG	0.301303	1:+2838755	None:intergenic
AACAATATATTGCCTAGTTA+AGG	0.302218	1:-2838712	MsG0180000205.01.T01:three_prime_UTR
CATGGGAGGAAGACATTTAC+TGG	0.340818	1:-2842545	MsG0180000205.01.T01:CDS
ATAAGATTTGATTCGTGATT+CGG	0.346305	1:-2839480	MsG0180000205.01.T01:intron
TTATGTTCCTTCAGAATAGA+AGG	0.360823	1:-2838942	MsG0180000205.01.T01:three_prime_UTR
AATGCGGTTCTGAGAAATTT+CGG	0.363117	1:-2841429	MsG0180000205.01.T01:CDS
CCAGCAAAATCAGCTACTTC+TGG	0.385623	1:-2841203	MsG0180000205.01.T01:CDS
TTGTCTCTCTGTTTCAAAAT+GGG	0.414043	1:-2842582	MsG0180000205.01.T01:CDS
TCAATGCTCTCGAGTCTTGA+TGG	0.415924	1:-2838828	MsG0180000205.01.T01:three_prime_UTR
ACAATATATTGCCTAGTTAA+GGG	0.416180	1:-2838711	MsG0180000205.01.T01:three_prime_UTR
GGTGGAAGCTGACTTTGTTT+CGG	0.419026	1:-2838973	MsG0180000205.01.T01:exon
GTGGAGTTGTGTGGAATATA+GGG	0.421556	1:-2841726	MsG0180000205.01.T01:CDS
TTTGTTAGAAAATGTGGAAA+AGG	0.421612	1:-2841535	MsG0180000205.01.T01:CDS
GCATCAGCCATGACCTGCTC+AGG	0.424246	1:+2841319	None:intergenic
TGAGTCTGCTTCCCCTGAGC+AGG	0.449413	1:-2841332	MsG0180000205.01.T01:CDS
GCGAGAAAGCAATTGTTGAT+TGG	0.450466	1:-2841181	MsG0180000205.01.T01:CDS
TGGGAAGTGTGAACCGATCA+TGG	0.456499	1:-2842563	MsG0180000205.01.T01:CDS
TGCTTCCCCTGAGCAGGTCA+TGG	0.458901	1:-2841326	MsG0180000205.01.T01:CDS
GAAGTCAACACTGCTTCTAA+TGG	0.464985	1:-2841460	MsG0180000205.01.T01:CDS
TATATCACATAAACTATTTG+AGG	0.467509	1:+2838748	None:intergenic
TGCGAAGAAATTGAGTGAAA+TGG	0.470492	1:+2842505	None:intergenic
AGAGCCTGCTTTCTCGCATA+AGG	0.473371	1:+2841561	None:intergenic
CCAACCGTTTGTGAAGTAAA+CGG	0.478109	1:+2841684	None:intergenic
CGAGAAAGCAATTGTTGATT+GGG	0.485091	1:-2841180	MsG0180000205.01.T01:CDS
TCTTACTTTGTTAGAAAATG+TGG	0.486876	1:-2841541	MsG0180000205.01.T01:CDS
CCCTGGTCCTAAGTTAGACT+CGG	0.487257	1:-2839414	MsG0180000205.01.T01:CDS
CCCGAGTCTAACTTAGGACC+AGG	0.492687	1:+2839413	None:intergenic
ATGGAAGGAAAGAAGAATGA+AGG	0.495294	1:+2842449	None:intergenic
CATGGACAAACTCCTAGAAA+TGG	0.504917	1:-2838780	MsG0180000205.01.T01:three_prime_UTR
GACACCGTTTACTTCACAAA+CGG	0.514012	1:-2841688	MsG0180000205.01.T01:CDS
TACTTCACAAACGGTTGGCA+AGG	0.517034	1:-2841679	MsG0180000205.01.T01:CDS
CAATGCTCTCGAGTCTTGAT+GGG	0.526601	1:-2838827	MsG0180000205.01.T01:three_prime_UTR
GAAATGGATGAACTGAAAAT+GGG	0.537991	1:+2842521	None:intergenic
TGGAAGGAAAGAAGAATGAA+GGG	0.543477	1:+2842450	None:intergenic
AACATAACCTTCTATTCTGA+AGG	0.545583	1:+2838935	None:intergenic
AATGAAAAGACTTCTAATGC+TGG	0.546042	1:-2841358	MsG0180000205.01.T01:CDS
ATTTCTTAGTAGTAGATGCA+TGG	0.551338	1:-2838798	MsG0180000205.01.T01:three_prime_UTR
AACATAATCAACCCTTAACT+AGG	0.556228	1:+2838700	None:intergenic
CCGTTTACTTCACAAACGGT+TGG	0.558722	1:-2841684	MsG0180000205.01.T01:CDS
AGGCAATATATTGTTCTCAA+AGG	0.561581	1:+2838720	None:intergenic
CTCATACCCGAGTCTAACTT+AGG	0.561871	1:+2839407	None:intergenic
CATCAGCCATGACCTGCTCA+GGG	0.563227	1:+2841320	None:intergenic
GAAAGCAATTGTTGATTGGG+TGG	0.568458	1:-2841177	MsG0180000205.01.T01:CDS
AAATGTCTTCCTCCCATGAT+CGG	0.572099	1:+2842550	None:intergenic
CGTGAAGATCGTGAAATTGA+AGG	0.574504	1:-2838994	MsG0180000205.01.T01:CDS
ATATTCCACACAACTCCACT+AGG	0.578077	1:+2841730	None:intergenic
GAATATCGATTTGATAACCC+TGG	0.581542	1:-2839431	MsG0180000205.01.T01:CDS
GATAGCACAAACTATTCTGA+AGG	0.583435	1:+2838874	None:intergenic
TGCTCTCGAGTCTTGATGGG+TGG	0.586623	1:-2838824	MsG0180000205.01.T01:three_prime_UTR
GAGACCTTATGCGAGAAAGC+AGG	0.587625	1:-2841565	MsG0180000205.01.T01:CDS
GCAAGAGGGCGACAAGGCAA+AGG	0.587651	1:-2841503	MsG0180000205.01.T01:CDS
GGGAAGTGTGAACCGATCAT+GGG	0.593667	1:-2842562	MsG0180000205.01.T01:CDS
GGCTGATGCAGTCACTATTG+CGG	0.596142	1:-2841305	MsG0180000205.01.T01:intron
TACTGAGCAAGAGGGCGACA+AGG	0.599125	1:-2841509	MsG0180000205.01.T01:CDS
GTGAACCTTAAAGGTCCTAG+TGG	0.609317	1:-2841745	MsG0180000205.01.T01:CDS
TGAACACTTAAGAACATGGA+AGG	0.613193	1:+2842434	None:intergenic
AAAAGGTCATACTGAGCAAG+AGG	0.615156	1:-2841518	MsG0180000205.01.T01:CDS
AAGGTCCTAGTGGAGTTGTG+TGG	0.624686	1:-2841735	MsG0180000205.01.T01:CDS
CCTGGTCCTAAGTTAGACTC+GGG	0.627266	1:-2839413	MsG0180000205.01.T01:intron
GCTTGTAGCAAGGAAAACTC+AGG	0.631925	1:-2841155	MsG0180000205.01.T01:intron
CCTGGCCAGCCTAAGAAGCG+GGG	0.640983	1:-2841230	MsG0180000205.01.T01:intron
GTCAACACTGCTTCTAATGG+CGG	0.645750	1:-2841457	MsG0180000205.01.T01:CDS
AAGTGTGAACCGATCATGGG+AGG	0.649028	1:-2842559	MsG0180000205.01.T01:CDS
TGATTGGGTGGCTTGTAGCA+AGG	0.654638	1:-2841165	MsG0180000205.01.T01:CDS
GAAGATCGTGAAATTGAAGG+TGG	0.655920	1:-2838991	MsG0180000205.01.T01:CDS
TCTAATGGCGGTGTTGAATG+CGG	0.661026	1:-2841445	MsG0180000205.01.T01:CDS
AAAGGTCATACTGAGCAAGA+GGG	0.680883	1:-2841517	MsG0180000205.01.T01:CDS
CCGAGTCTAACTTAGGACCA+GGG	0.703476	1:+2839414	None:intergenic
ATCAGCCATGACCTGCTCAG+GGG	0.726483	1:+2841321	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAAAAAAAATGCAAACA+TGG	-	Chr1:2842161-2842180	MsG0180000205.01.T01:intron	15.0%
!!	AAGATACAAAAATTAAAAAG+TGG	+	Chr1:2838971-2838990	None:intergenic	15.0%
!!	AGATACAAAAATTAAAAAGT+GGG	+	Chr1:2838970-2838989	None:intergenic	15.0%
!!	GTATATAAATATAATAAGCA+TGG	+	Chr1:2839085-2839104	None:intergenic	15.0%
!!	TTCAATGTAATTATATGTAT+TGG	-	Chr1:2839209-2839228	MsG0180000205.01.T01:intron	15.0%
!!!	TTTGAAGTTTTAATATTTCA+TGG	-	Chr1:2839701-2839720	MsG0180000205.01.T01:intron	15.0%
!!	AATAATTTGAGAAAATCACA+TGG	-	Chr1:2839178-2839197	MsG0180000205.01.T01:intron	20.0%
!!	CAAAACATATAGAAATTGAT+CGG	+	Chr1:2841064-2841083	None:intergenic	20.0%
!!	TAAAGAGAAAGATAAAGAAA+TGG	+	Chr1:2840835-2840854	None:intergenic	20.0%
!!	TATATCACATAAACTATTTG+AGG	+	Chr1:2842545-2842564	None:intergenic	20.0%
!!!	AAATTGTCTGAAAATGTTTT+AGG	+	Chr1:2839503-2839522	None:intergenic	20.0%
!!!	ATGTATCAACTTAATTTTGA+GGG	-	Chr1:2840602-2840621	MsG0180000205.01.T01:intron	20.0%
!!!	TATTTTAATGATGGTCAAAA+AGG	+	Chr1:2840804-2840823	None:intergenic	20.0%
!	AACAATATATTGCCTAGTTA+AGG	-	Chr1:2842578-2842597	MsG0180000205.01.T01:CDS	25.0%
!	AATATGAACACTTAAGAACA+TGG	+	Chr1:2838863-2838882	None:intergenic	25.0%
!	ACAATATATTGCCTAGTTAA+GGG	-	Chr1:2842579-2842598	MsG0180000205.01.T01:CDS	25.0%
!	AGGTAACAAAAATTTGGAAA+AGG	+	Chr1:2841959-2841978	None:intergenic	25.0%
!	ATGTTGATACATTTATTTGC+AGG	-	Chr1:2839472-2839491	MsG0180000205.01.T01:CDS	25.0%
!	ATTGAGAAAATTTAGACCTA+TGG	+	Chr1:2841224-2841243	None:intergenic	25.0%
!	ATTGGTAGGTAACAAAAATT+TGG	+	Chr1:2841965-2841984	None:intergenic	25.0%
!	TAGTGTATATATAATGGCTT+GGG	-	Chr1:2839305-2839324	MsG0180000205.01.T01:intron	25.0%
!	TCTTACTTTGTTAGAAAATG+TGG	-	Chr1:2839749-2839768	MsG0180000205.01.T01:intron	25.0%
!	TGACAACAAAAAAAAAAAGC+TGG	+	Chr1:2840504-2840523	None:intergenic	25.0%
!	TGAGGAATGAAGAAAAAAAA+TGG	+	Chr1:2842241-2842260	None:intergenic	25.0%
!	TGGATTAAAGAAAGTGAATA+AGG	-	Chr1:2839399-2839418	MsG0180000205.01.T01:intron	25.0%
!	TGTGTATATAATATGAAGCA+CGG	-	Chr1:2839120-2839139	MsG0180000205.01.T01:intron	25.0%
!	TTGAATCATGAATTCTTATG+AGG	-	Chr1:2840569-2840588	MsG0180000205.01.T01:intron	25.0%
!	TTGATTTATTTGGTACACAT+AGG	+	Chr1:2841530-2841549	None:intergenic	25.0%
!	TTTGTTAGAAAATGTGGAAA+AGG	-	Chr1:2839755-2839774	MsG0180000205.01.T01:intron	25.0%
!!	AGCATTTATTGATGGTTAAA+AGG	+	Chr1:2841693-2841712	None:intergenic	25.0%
!!	ATAAGATTTGATTCGTGATT+CGG	-	Chr1:2841810-2841829	MsG0180000205.01.T01:intron	25.0%
!!	GATGTATCAACTTAATTTTG+AGG	-	Chr1:2840601-2840620	MsG0180000205.01.T01:intron	25.0%
!!	TTCTCTTTAATTTCATGCTT+CGG	-	Chr1:2841737-2841756	MsG0180000205.01.T01:CDS	25.0%
!!	TTTTCATTGGTATTTTCGAA+AGG	+	Chr1:2839920-2839939	None:intergenic	25.0%
!!	TTTTTATATTGTCATAGGCA+TGG	-	Chr1:2840331-2840350	MsG0180000205.01.T01:intron	25.0%
!!!	GAATGCTAGTATTTTAATGA+TGG	+	Chr1:2840813-2840832	None:intergenic	25.0%
	AACATAACCTTCTATTCTGA+AGG	+	Chr1:2842358-2842377	None:intergenic	30.0%
	AATGAAAAGACTTCTAATGC+TGG	-	Chr1:2839932-2839951	MsG0180000205.01.T01:intron	30.0%
	AGAGGACTCTTATCTAAATT+AGG	+	Chr1:2841395-2841414	None:intergenic	30.0%
	AGGCAATATATTGTTCTCAA+AGG	+	Chr1:2842573-2842592	None:intergenic	30.0%
	ATAAAAACCGGAAAACAAAC+TGG	+	Chr1:2840318-2840337	None:intergenic	30.0%
	ATCAAATGACAAAAGAAACG+TGG	+	Chr1:2840542-2840561	None:intergenic	30.0%
	ATGCCTTATCTTACATTGAA+TGG	-	Chr1:2842116-2842135	MsG0180000205.01.T01:intron	30.0%
	ATGGTGAGTCAATTCATTAA+TGG	+	Chr1:2841482-2841501	None:intergenic	30.0%
	ATTAAAGAAGAGTTGGACAA+TGG	+	Chr1:2841035-2841054	None:intergenic	30.0%
	ATTTCTTAGTAGTAGATGCA+TGG	-	Chr1:2842492-2842511	MsG0180000205.01.T01:CDS	30.0%
	CATAAACTATTTGAGGAGTT+TGG	+	Chr1:2842538-2842557	None:intergenic	30.0%
	CTTCATTCCTCATAATTTCA+GGG	-	Chr1:2842249-2842268	MsG0180000205.01.T01:intron	30.0%
	CTTGTAAAAAAAGAGAGAGA+AGG	-	Chr1:2842380-2842399	MsG0180000205.01.T01:intron	30.0%
	GAAATGGATGAACTGAAAAT+GGG	+	Chr1:2838772-2838791	None:intergenic	30.0%
	GAGAAACCAAAAATTGCAAA+TGG	+	Chr1:2841722-2841741	None:intergenic	30.0%
	GATTTGAAGATACAATGTGA+AGG	+	Chr1:2841157-2841176	None:intergenic	30.0%
	GCCTATGACAATATAAAAAC+CGG	+	Chr1:2840330-2840349	None:intergenic	30.0%
	GCTTCGTAGTGTATATATAA+TGG	-	Chr1:2839299-2839318	MsG0180000205.01.T01:intron	30.0%
	GTAGTGTATATATAATGGCT+TGG	-	Chr1:2839304-2839323	MsG0180000205.01.T01:intron	30.0%
	TATATATACACTACGAAGCA+AGG	+	Chr1:2839298-2839317	None:intergenic	30.0%
	TCTTCATTCCTCATAATTTC+AGG	-	Chr1:2842248-2842267	MsG0180000205.01.T01:intron	30.0%
	TGAAATGGATGAACTGAAAA+TGG	+	Chr1:2838773-2838792	None:intergenic	30.0%
	TGCCTTATCTTACATTGAAT+GGG	-	Chr1:2842117-2842136	MsG0180000205.01.T01:intron	30.0%
	TTATGTTCCTTCAGAATAGA+AGG	-	Chr1:2842348-2842367	MsG0180000205.01.T01:intron	30.0%
	TTGTCTCTCTGTTTCAAAAT+GGG	-	Chr1:2838708-2838727	MsG0180000205.01.T01:three_prime_UTR	30.0%
!	AGCATTAGAAGTCTTTTCAT+TGG	+	Chr1:2839933-2839952	None:intergenic	30.0%
!	CACATTCCATTTGCAATTTT+TGG	-	Chr1:2841713-2841732	MsG0180000205.01.T01:CDS	30.0%
!	TACATTGATGTTGATTATGC+AGG	+	Chr1:2841350-2841369	None:intergenic	30.0%
!	TCCGGTTTTTATATTGTCAT+AGG	-	Chr1:2840326-2840345	MsG0180000205.01.T01:intron	30.0%
!	TTCAGTTTAGAATCGAATCA+AGG	+	Chr1:2840389-2840408	None:intergenic	30.0%
!!	TTTCTTGCTTCTGTTATTTC+TGG	-	Chr1:2840856-2840875	MsG0180000205.01.T01:intron	30.0%
!!!	CTCCTTTTTTTCAAGTACAA+TGG	-	Chr1:2839668-2839687	MsG0180000205.01.T01:intron	30.0%
!!!	CTTTTGAGACAATATGTTCA+TGG	-	Chr1:2839353-2839372	MsG0180000205.01.T01:intron	30.0%
	AAATTTAGACCTATGGCACA+AGG	+	Chr1:2841217-2841236	None:intergenic	35.0%
	AATGACAAAAGAAACGTGGT+TGG	+	Chr1:2840538-2840557	None:intergenic	35.0%
	ACTAGAGATTCGTATCAACT+GGG	+	Chr1:2840412-2840431	None:intergenic	35.0%
	ATAATCCTATTCAGCATGAC+AGG	+	Chr1:2841088-2841107	None:intergenic	35.0%
	ATCATACAACACAGCTTCAT+TGG	-	Chr1:2841130-2841149	MsG0180000205.01.T01:intron	35.0%
	ATCTGTTTCATACCTGGATA+AGG	+	Chr1:2842003-2842022	None:intergenic	35.0%
	ATGGAAGGAAAGAAGAATGA+AGG	+	Chr1:2838844-2838863	None:intergenic	35.0%
	ATTAGGAGGAAGACTAACTA+TGG	+	Chr1:2841378-2841397	None:intergenic	35.0%
	CCTGAAAATGTGAACCTTAA+AGG	-	Chr1:2839536-2839555	MsG0180000205.01.T01:intron	35.0%
	CGCCATTGTACTTGAAAAAA+AGG	+	Chr1:2839673-2839692	None:intergenic	35.0%
	GATAGCACAAACTATTCTGA+AGG	+	Chr1:2842419-2842438	None:intergenic	35.0%
	GCACTTCATTAAAGAAGAGT+TGG	+	Chr1:2841042-2841061	None:intergenic	35.0%
	GCCTTATCTTACATTGAATG+GGG	-	Chr1:2842118-2842137	MsG0180000205.01.T01:intron	35.0%
	GGAATGTGAGCATTTATTGA+TGG	+	Chr1:2841701-2841720	None:intergenic	35.0%
	GGACTCTTATCTAAATTAGG+AGG	+	Chr1:2841392-2841411	None:intergenic	35.0%
	GGGTTTCCTTTCAACTAATT+CGG	+	Chr1:2840905-2840924	None:intergenic	35.0%
	GGTTAAAAGGATATGCAGAA+GGG	+	Chr1:2841680-2841699	None:intergenic	35.0%
	GTTACCTACCAATATGTTGA+TGG	-	Chr1:2841972-2841991	MsG0180000205.01.T01:intron	35.0%
	TATAATATGAAGCACGGACA+CGG	-	Chr1:2839126-2839145	MsG0180000205.01.T01:intron	35.0%
	TCAAAGCTTGTCTTGTGATT+GGG	-	Chr1:2841589-2841608	MsG0180000205.01.T01:CDS	35.0%
	TCAATTCATTAATGGTCCGA+GGG	+	Chr1:2841474-2841493	None:intergenic	35.0%
	TCCCCATTCAATGTAAGATA+AGG	+	Chr1:2842122-2842141	None:intergenic	35.0%
	TCTGTTTCATACCTGGATAA+GGG	+	Chr1:2842002-2842021	None:intergenic	35.0%
	TGAACACTTAAGAACATGGA+AGG	+	Chr1:2838859-2838878	None:intergenic	35.0%
	TGCGAAGAAATTGAGTGAAA+TGG	+	Chr1:2838788-2838807	None:intergenic	35.0%
	TGGAAGGAAAGAAGAATGAA+GGG	+	Chr1:2838843-2838862	None:intergenic	35.0%
	TGGTTAAAAGGATATGCAGA+AGG	+	Chr1:2841681-2841700	None:intergenic	35.0%
!	AGGGGGGAAATTGATTTATT+TGG	+	Chr1:2841540-2841559	None:intergenic	35.0%
!	CGAGAAAGCAATTGTTGATT+GGG	-	Chr1:2840110-2840129	MsG0180000205.01.T01:intron	35.0%
!	GAGTAAGAAGCATAGTTTAG+TGG	+	Chr1:2841258-2841277	None:intergenic	35.0%
!	GCAAAAATTGAGTTGCTAGA+AGG	+	Chr1:2841280-2841299	None:intergenic	35.0%
!	GCAGAATCATTGTTCTGTTT+TGG	-	Chr1:2840703-2840722	MsG0180000205.01.T01:intron	35.0%
!	TGATTCGTGATTCGGAAAAT+AGG	-	Chr1:2841818-2841837	MsG0180000205.01.T01:intron	35.0%
!	TTTCATGCTTCGGTTATTTC+TGG	-	Chr1:2841747-2841766	MsG0180000205.01.T01:CDS	35.0%
!!	AATGCGGTTCTGAGAAATTT+CGG	-	Chr1:2839861-2839880	MsG0180000205.01.T01:intron	35.0%
!!	ATTAGCAGAAGTGTTGGTAA+AGG	+	Chr1:2840979-2840998	None:intergenic	35.0%
!!	GAATATCGATTTGATAACCC+TGG	-	Chr1:2841859-2841878	MsG0180000205.01.T01:intron	35.0%
!!	TACTCAAAGTTTTGGTAGAG+TGG	+	Chr1:2840476-2840495	None:intergenic	35.0%
!!	TATATGTATTGGTGTCGTGT+CGG	-	Chr1:2839220-2839239	MsG0180000205.01.T01:intron	35.0%
!!	TTAGCAGAAGTGTTGGTAAA+GGG	+	Chr1:2840978-2840997	None:intergenic	35.0%
!!	TTTTCGAAAGGTACAGCTAA+TGG	+	Chr1:2839908-2839927	None:intergenic	35.0%
!!!	CCTTTAAGGTTCACATTTTC+AGG	+	Chr1:2839539-2839558	None:intergenic	35.0%
	AAAAGGTCATACTGAGCAAG+AGG	-	Chr1:2839772-2839791	MsG0180000205.01.T01:intron	40.0%
	AAACGATTCGACCAACTTAC+TGG	+	Chr1:2840945-2840964	None:intergenic	40.0%
	AAAGGTCATACTGAGCAAGA+GGG	-	Chr1:2839773-2839792	MsG0180000205.01.T01:intron	40.0%
	AAATGTCTTCCTCCCATGAT+CGG	+	Chr1:2838743-2838762	None:intergenic	40.0%
	AACCGGAAAACAAACTGGTT+AGG	+	Chr1:2840313-2840332	None:intergenic	40.0%
	AACTTCGTTAACAGGCTTCT+TGG	+	Chr1:2840037-2840056	None:intergenic	40.0%
	AAGGAATATGTGAGCTCCTA+TGG	+	Chr1:2841198-2841217	None:intergenic	40.0%
	AGTGGAGTTGTGTGGAATAT+AGG	-	Chr1:2839563-2839582	MsG0180000205.01.T01:intron	40.0%
	ATATTCCACACAACTCCACT+AGG	+	Chr1:2839563-2839582	None:intergenic	40.0%
	ATCCACAAAACCATGCTTGA+TGG	+	Chr1:2839384-2839403	None:intergenic	40.0%
	ATTTGAGCCATGAGAGATCA+TGG	+	Chr1:2842193-2842212	None:intergenic	40.0%
	CAATCACAAGACAAGCTTTG+AGG	+	Chr1:2841590-2841609	None:intergenic	40.0%
	CACTAGAGATTCGTATCAAC+TGG	+	Chr1:2840413-2840432	None:intergenic	40.0%
	CATGGACAAACTCCTAGAAA+TGG	-	Chr1:2842510-2842529	MsG0180000205.01.T01:CDS	40.0%
	CCAACCGTTTGTGAAGTAAA+CGG	+	Chr1:2839609-2839628	None:intergenic	40.0%
	CCTTCCATCAACATATTGGT+AGG	+	Chr1:2841979-2841998	None:intergenic	40.0%
	CGTCAAATCTGTTTCATACC+TGG	+	Chr1:2842009-2842028	None:intergenic	40.0%
	CGTGAAGATCGTGAAATTGA+AGG	-	Chr1:2842296-2842315	MsG0180000205.01.T01:intron	40.0%
	CTCAAAGCTTGTCTTGTGAT+TGG	-	Chr1:2841588-2841607	MsG0180000205.01.T01:CDS	40.0%
	CTTTGCTCCCTGAAATTATG+AGG	+	Chr1:2842259-2842278	None:intergenic	40.0%
	GAAGATCGTGAAATTGAAGG+TGG	-	Chr1:2842299-2842318	MsG0180000205.01.T01:intron	40.0%
	GAAGTCAACACTGCTTCTAA+TGG	-	Chr1:2839830-2839849	MsG0180000205.01.T01:intron	40.0%
	GACACCGTTTACTTCACAAA+CGG	-	Chr1:2839602-2839621	MsG0180000205.01.T01:intron	40.0%
	GCGAGAAAGCAATTGTTGAT+TGG	-	Chr1:2840109-2840128	MsG0180000205.01.T01:intron	40.0%
	GTATGAAACAGATTTGACGC+AGG	-	Chr1:2842010-2842029	MsG0180000205.01.T01:intron	40.0%
	GTCAATTCATTAATGGTCCG+AGG	+	Chr1:2841475-2841494	None:intergenic	40.0%
	GTGGAGTTGTGTGGAATATA+GGG	-	Chr1:2839564-2839583	MsG0180000205.01.T01:intron	40.0%
	TCACATATTCCTTGTGCCAT+AGG	-	Chr1:2841205-2841224	MsG0180000205.01.T01:CDS	40.0%
	TCAGTACCATCTTCATCCAT+AGG	-	Chr1:2841179-2841198	MsG0180000205.01.T01:CDS	40.0%
	TGATTATGCAGGTTCAGTGA+GGG	+	Chr1:2841339-2841358	None:intergenic	40.0%
	TTAATATGAGGTGGGAGTTG+TGG	-	Chr1:2840659-2840678	MsG0180000205.01.T01:intron	40.0%
	TTCCTTTCAACTAATTCGGC+AGG	+	Chr1:2840901-2840920	None:intergenic	40.0%
	TTGATTATGCAGGTTCAGTG+AGG	+	Chr1:2841340-2841359	None:intergenic	40.0%
	TTGGTAAAGCTACACAAGTG+TGG	+	Chr1:2842084-2842103	None:intergenic	40.0%
	TTTGTCCTGTCATGCTGAAT+AGG	-	Chr1:2841080-2841099	MsG0180000205.01.T01:intron	40.0%
!	AGTTGGTCGAATCGTTTTGA+TGG	-	Chr1:2840948-2840967	MsG0180000205.01.T01:intron	40.0%
!	CCTACCAATATGTTGATGGA+AGG	-	Chr1:2841976-2841995	MsG0180000205.01.T01:intron	40.0%
!	GAAAGCAATTGTTGATTGGG+TGG	-	Chr1:2840113-2840132	MsG0180000205.01.T01:intron	40.0%
!	GCATATGAAAGCACAGTAGA+TGG	-	Chr1:2841298-2841317	MsG0180000205.01.T01:intron	40.0%
!	GCATCAATTAGCAGAAGTGT+TGG	+	Chr1:2840985-2841004	None:intergenic	40.0%
!	GGATTCGGTTAATATGAGGT+GGG	-	Chr1:2840651-2840670	MsG0180000205.01.T01:intron	40.0%
!	TGGTTCGCTACTCAAAGTTT+TGG	+	Chr1:2840484-2840503	None:intergenic	40.0%
!!	AAGGCATTGCTCAAGCATAT+TGG	+	Chr1:2842103-2842122	None:intergenic	40.0%
!!	GTCCTAACCAGTTTGTTTTC+CGG	-	Chr1:2840308-2840327	MsG0180000205.01.T01:intron	40.0%
!!	TTTGGCTTGTGCAGTTAGTA+TGG	+	Chr1:2841501-2841520	None:intergenic	40.0%
	AAATTGGCAAGCTACTAGGG+GGG	+	Chr1:2841556-2841575	None:intergenic	45.0%
	ACACGACACATATCCGATAC+CGG	-	Chr1:2839249-2839268	MsG0180000205.01.T01:intron	45.0%
	ACTTGCAAATGTCTCACCCT+CGG	-	Chr1:2841455-2841474	MsG0180000205.01.T01:CDS	45.0%
	AGATAAGAGTCCTCTCCCTA+GGG	-	Chr1:2841400-2841419	MsG0180000205.01.T01:CDS	45.0%
	AGGAGGAAGACTAACTATGG+AGG	+	Chr1:2841375-2841394	None:intergenic	45.0%
	AGGAGTTTGGCACCATTTCT+AGG	+	Chr1:2842525-2842544	None:intergenic	45.0%
	AGGGCCTTCCATCAACATAT+TGG	+	Chr1:2841983-2842002	None:intergenic	45.0%
	CAAATTGGCAAGCTACTAGG+GGG	+	Chr1:2841557-2841576	None:intergenic	45.0%
	CAACTCCACTAGGACCTTTA+AGG	+	Chr1:2839553-2839572	None:intergenic	45.0%
	CAATGCTCTCGAGTCTTGAT+GGG	-	Chr1:2842463-2842482	MsG0180000205.01.T01:CDS	45.0%
	CATGGATTCACCATCAAGCA+TGG	-	Chr1:2839371-2839390	MsG0180000205.01.T01:intron	45.0%
	CATGGGAGGAAGACATTTAC+TGG	-	Chr1:2838745-2838764	MsG0180000205.01.T01:three_prime_UTR	45.0%
	CCAAATTGGCAAGCTACTAG+GGG	+	Chr1:2841558-2841577	None:intergenic	45.0%
	CCAGCAAAATCAGCTACTTC+TGG	-	Chr1:2840087-2840106	MsG0180000205.01.T01:intron	45.0%
	CCGTTTACTTCACAAACGGT+TGG	-	Chr1:2839606-2839625	MsG0180000205.01.T01:intron	45.0%
	CTAACTGCACAAGCCAAATC+TGG	-	Chr1:2841503-2841522	MsG0180000205.01.T01:CDS	45.0%
	CTCATACCCGAGTCTAACTT+AGG	+	Chr1:2841886-2841905	None:intergenic	45.0%
	CTTTCAACTAATTCGGCAGG+CGG	+	Chr1:2840898-2840917	None:intergenic	45.0%
	GAGGGAAAGTGAGAATCAGT+GGG	-	Chr1:2840620-2840639	MsG0180000205.01.T01:intron	45.0%
	GATATCTCCAAGACACCCTA+GGG	+	Chr1:2841418-2841437	None:intergenic	45.0%
	GCCAAATTGGCAAGCTACTA+GGG	+	Chr1:2841559-2841578	None:intergenic	45.0%
	GCTTGTAGCAAGGAAAACTC+AGG	-	Chr1:2840135-2840154	MsG0180000205.01.T01:intron	45.0%
	GGTACACATAGGTCCAGATT+TGG	+	Chr1:2841519-2841538	None:intergenic	45.0%
	GTCAACACTGCTTCTAATGG+CGG	-	Chr1:2839833-2839852	MsG0180000205.01.T01:intron	45.0%
	GTGAACCTTAAAGGTCCTAG+TGG	-	Chr1:2839545-2839564	MsG0180000205.01.T01:intron	45.0%
	GTGCTTTCCATGATCTCTCA+TGG	-	Chr1:2842183-2842202	MsG0180000205.01.T01:intron	45.0%
	TACTTCACAAACGGTTGGCA+AGG	-	Chr1:2839611-2839630	MsG0180000205.01.T01:intron	45.0%
	TAGATAAGAGTCCTCTCCCT+AGG	-	Chr1:2841399-2841418	MsG0180000205.01.T01:CDS	45.0%
	TCAATGCTCTCGAGTCTTGA+TGG	-	Chr1:2842462-2842481	MsG0180000205.01.T01:CDS	45.0%
	TCGACCAACTTACTGGCAAA+GGG	+	Chr1:2840938-2840957	None:intergenic	45.0%
	TGAGCTCCTATGGATGAAGA+TGG	+	Chr1:2841188-2841207	None:intergenic	45.0%
	TGAGGAGGGAATTGCCAAAT+TGG	+	Chr1:2841572-2841591	None:intergenic	45.0%
	TGAGGGAAAGTGAGAATCAG+TGG	-	Chr1:2840619-2840638	MsG0180000205.01.T01:intron	45.0%
	TGCCAAATTGGCAAGCTACT+AGG	+	Chr1:2841560-2841579	None:intergenic	45.0%
	TGGCAAAGGGTCTGAACAAT+GGG	+	Chr1:2840925-2840944	None:intergenic	45.0%
	TTCGACCAACTTACTGGCAA+AGG	+	Chr1:2840939-2840958	None:intergenic	45.0%
!	AGCATTGCTCTTTGGTGGTA+GGG	-	Chr1:2841648-2841667	MsG0180000205.01.T01:CDS	45.0%
!	CTGGGGATTCGGTTAATATG+AGG	-	Chr1:2840647-2840666	MsG0180000205.01.T01:intron	45.0%
!	GGGATTCGGTTAATATGAGG+TGG	-	Chr1:2840650-2840669	MsG0180000205.01.T01:intron	45.0%
!	GGTGGAAGCTGACTTTGTTT+CGG	-	Chr1:2842317-2842336	MsG0180000205.01.T01:intron	45.0%
!	TCTAATGGCGGTGTTGAATG+CGG	-	Chr1:2839845-2839864	MsG0180000205.01.T01:intron	45.0%
!	TGGTCAAAAAGGCATGCAGA+AGG	+	Chr1:2840793-2840812	None:intergenic	45.0%
!	TGGTCTTTTTGCCGGTGTTT+GGG	+	Chr1:2840017-2840036	None:intergenic	45.0%
!!	AGGCTTCTTGGTCTTTTTGC+CGG	+	Chr1:2840025-2840044	None:intergenic	45.0%
!!	CACAAGACAAGCTTTGAGGA+GGG	+	Chr1:2841586-2841605	None:intergenic	45.0%
!!	CACCATCAAGCATGGTTTTG+TGG	-	Chr1:2839379-2839398	MsG0180000205.01.T01:intron	45.0%
!!	CCAGAAGTAGCTGATTTTGC+TGG	+	Chr1:2840090-2840109	None:intergenic	45.0%
!!	CTGTGTAGAGCATTGCTCTT+TGG	-	Chr1:2841640-2841659	MsG0180000205.01.T01:CDS	45.0%
!!	TCACAAGACAAGCTTTGAGG+AGG	+	Chr1:2841587-2841606	None:intergenic	45.0%
!!	TGAGAATCAGTGGGTTAGCT+GGG	-	Chr1:2840629-2840648	MsG0180000205.01.T01:intron	45.0%
!!	TGTAGAGCATTGCTCTTTGG+TGG	-	Chr1:2841643-2841662	MsG0180000205.01.T01:CDS	45.0%
!!	TTGGTCTTTTTGCCGGTGTT+TGG	+	Chr1:2840018-2840037	None:intergenic	45.0%
	AAGGTCCTAGTGGAGTTGTG+TGG	-	Chr1:2839555-2839574	MsG0180000205.01.T01:intron	50.0%
	AAGTGTGAACCGATCATGGG+AGG	-	Chr1:2838731-2838750	MsG0180000205.01.T01:three_prime_UTR	50.0%
	AGAGCCTGCTTTCTCGCATA+AGG	+	Chr1:2839732-2839751	None:intergenic	50.0%
	CACGACACATATCCGATACC+GGG	-	Chr1:2839250-2839269	MsG0180000205.01.T01:intron	50.0%
	CAGACCCTTTGCCAGTAAGT+TGG	-	Chr1:2840931-2840950	MsG0180000205.01.T01:intron	50.0%
	CCAGGCGTAACTTCGTTAAC+AGG	+	Chr1:2840045-2840064	None:intergenic	50.0%
	CCCTGGTCCTAAGTTAGACT+CGG	-	Chr1:2841876-2841895	MsG0180000205.01.T01:intron	50.0%
	CCGAGTCTAACTTAGGACCA+GGG	+	Chr1:2841879-2841898	None:intergenic	50.0%
	CCTGGTCCTAAGTTAGACTC+GGG	-	Chr1:2841877-2841896	MsG0180000205.01.T01:intron	50.0%
	CCTGTTAACGAAGTTACGCC+TGG	-	Chr1:2840042-2840061	MsG0180000205.01.T01:intron	50.0%
	CGATATCTCCAAGACACCCT+AGG	+	Chr1:2841419-2841438	None:intergenic	50.0%
	CGCCTGCCGAATTAGTTGAA+AGG	-	Chr1:2840896-2840915	MsG0180000205.01.T01:intron	50.0%
	CTGGCAAAGGGTCTGAACAA+TGG	+	Chr1:2840926-2840945	None:intergenic	50.0%
	GAGACCTTATGCGAGAAAGC+AGG	-	Chr1:2839725-2839744	MsG0180000205.01.T01:intron	50.0%
	GAGTTGTGGAGTGATAGAGG+GGG	-	Chr1:2840673-2840692	MsG0180000205.01.T01:intron	50.0%
	GGAGTTGTGGAGTGATAGAG+GGG	-	Chr1:2840672-2840691	MsG0180000205.01.T01:intron	50.0%
	GGCTGATGCAGTCACTATTG+CGG	-	Chr1:2839985-2840004	MsG0180000205.01.T01:intron	50.0%
	GGGAGTTGTGGAGTGATAGA+GGG	-	Chr1:2840671-2840690	MsG0180000205.01.T01:intron	50.0%
	TACGAAGCAAGGACACTCCT+CGG	+	Chr1:2839287-2839306	None:intergenic	50.0%
	TGGGAGTTGTGGAGTGATAG+AGG	-	Chr1:2840670-2840689	MsG0180000205.01.T01:intron	50.0%
	TTGATGGAAGGCCCTTATCC+AGG	-	Chr1:2841988-2842007	MsG0180000205.01.T01:intron	50.0%
!	CCCCTAGTAGCTTGCCAATT+TGG	-	Chr1:2841555-2841574	MsG0180000205.01.T01:CDS	50.0%
!	CTTTTTGCCGGTGTTTGGGA+GGG	+	Chr1:2840013-2840032	None:intergenic	50.0%
!	GAGCATTGCTCTTTGGTGGT+AGG	-	Chr1:2841647-2841666	MsG0180000205.01.T01:CDS	50.0%
!	GGGAAGTGTGAACCGATCAT+GGG	-	Chr1:2838728-2838747	MsG0180000205.01.T01:three_prime_UTR	50.0%
!	TCTTTTTGCCGGTGTTTGGG+AGG	+	Chr1:2840014-2840033	None:intergenic	50.0%
!	TGATTGGGTGGCTTGTAGCA+AGG	-	Chr1:2840125-2840144	MsG0180000205.01.T01:intron	50.0%
!	TGGGAAGTGTGAACCGATCA+TGG	-	Chr1:2838727-2838746	MsG0180000205.01.T01:three_prime_UTR	50.0%
!	TTGCTCTTTGGTGGTAGGGA+TGG	-	Chr1:2841652-2841671	MsG0180000205.01.T01:CDS	50.0%
!!	GAGAATCAGTGGGTTAGCTG+GGG	-	Chr1:2840630-2840649	MsG0180000205.01.T01:intron	50.0%
!!	GAGTGATAGAGGGGGTATCA+TGG	-	Chr1:2840681-2840700	MsG0180000205.01.T01:intron	50.0%
!!	GGTCGAATCGTTTTGATGGC+AGG	-	Chr1:2840952-2840971	MsG0180000205.01.T01:intron	50.0%
!!	GTGAGAATCAGTGGGTTAGC+TGG	-	Chr1:2840628-2840647	MsG0180000205.01.T01:intron	50.0%
!!	TATTGGTGTCGTGTCGGTGT+CGG	-	Chr1:2839226-2839245	MsG0180000205.01.T01:intron	50.0%
	ATCAGCCATGACCTGCTCAG+GGG	+	Chr1:2839972-2839991	None:intergenic	55.0%
	CATCAGCCATGACCTGCTCA+GGG	+	Chr1:2839973-2839992	None:intergenic	55.0%
	CCCGAGTCTAACTTAGGACC+AGG	+	Chr1:2841880-2841899	None:intergenic	55.0%
	GATTAGGCGTGTCCCGGTAT+CGG	+	Chr1:2839265-2839284	None:intergenic	55.0%
	GCAAGGACACTCCTCGGATT+AGG	+	Chr1:2839281-2839300	None:intergenic	55.0%
	TACTGAGCAAGAGGGCGACA+AGG	-	Chr1:2839781-2839800	MsG0180000205.01.T01:intron	55.0%
	TGAAGCACGGACACGGAAAG+TGG	-	Chr1:2839133-2839152	MsG0180000205.01.T01:intron	55.0%
	TGCTCTCGAGTCTTGATGGG+TGG	-	Chr1:2842466-2842485	MsG0180000205.01.T01:CDS	55.0%
!!	CAGTGGGTTAGCTGGGGATT+CGG	-	Chr1:2840636-2840655	MsG0180000205.01.T01:intron	55.0%
	CTCCAAGACACCCTAGGGAG+AGG	+	Chr1:2841413-2841432	None:intergenic	60.0%
	GCAAGAGGGCGACAAGGCAA+AGG	-	Chr1:2839787-2839806	MsG0180000205.01.T01:intron	60.0%
	GCATCAGCCATGACCTGCTC+AGG	+	Chr1:2839974-2839993	None:intergenic	60.0%
	GTCTTCCCCGCTTCTTAGGC+TGG	+	Chr1:2840068-2840087	None:intergenic	60.0%
	TGAGTCTGCTTCCCCTGAGC+AGG	-	Chr1:2839958-2839977	MsG0180000205.01.T01:intron	60.0%
	TGCGGTTCCCTCCCAAACAC+CGG	-	Chr1:2840003-2840022	MsG0180000205.01.T01:intron	60.0%
	TGCTTCCCCTGAGCAGGTCA+TGG	-	Chr1:2839964-2839983	MsG0180000205.01.T01:intron	60.0%
!	GTCCTCTCCCTAGGGTGTCT+TGG	-	Chr1:2841408-2841427	MsG0180000205.01.T01:CDS	60.0%
!	TCCTCGGATTAGGCGTGTCC+CGG	+	Chr1:2839271-2839290	None:intergenic	60.0%
!!	GCTGGTCTTCCCCGCTTCTT+AGG	+	Chr1:2840072-2840091	None:intergenic	60.0%
	ACCGGGACACGCCTAATCCG+AGG	-	Chr1:2839267-2839286	MsG0180000205.01.T01:intron	65.0%
	CCTGGCCAGCCTAAGAAGCG+GGG	-	Chr1:2840060-2840079	MsG0180000205.01.T01:intron	65.0%
	CGCCTGGCCAGCCTAAGAAG+CGG	-	Chr1:2840058-2840077	MsG0180000205.01.T01:intron	65.0%
	GCCTGGCCAGCCTAAGAAGC+GGG	-	Chr1:2840059-2840078	MsG0180000205.01.T01:intron	65.0%
!	CCCCGCTTCTTAGGCTGGCC+AGG	+	Chr1:2840063-2840082	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	2838708	2842604	2838708	ID=MsG0180000205.01;Name=MsG0180000205.01
Chr1	mRNA	2838708	2842604	2838708	ID=MsG0180000205.01.T01;Parent=MsG0180000205.01;Name=MsG0180000205.01.T01;_AED=0.49;_eAED=0.53;_QI=0\|0\|0.2\|1\|0.75\|0.8\|5\|276\|297
Chr1	exon	2842449	2842604	2842449	ID=MsG0180000205.01.T01:exon:6413;Parent=MsG0180000205.01.T01
Chr1	exon	2841306	2841818	2841306	ID=MsG0180000205.01.T01:exon:6414;Parent=MsG0180000205.01.T01
Chr1	exon	2841156	2841237	2841156	ID=MsG0180000205.01.T01:exon:6415;Parent=MsG0180000205.01.T01
Chr1	exon	2839414	2839497	2839414	ID=MsG0180000205.01.T01:exon:6416;Parent=MsG0180000205.01.T01
Chr1	exon	2838708	2839042	2838708	ID=MsG0180000205.01.T01:exon:6417;Parent=MsG0180000205.01.T01
Chr1	CDS	2842449	2842604	2842449	ID=MsG0180000205.01.T01:cds;Parent=MsG0180000205.01.T01
Chr1	CDS	2841306	2841818	2841306	ID=MsG0180000205.01.T01:cds;Parent=MsG0180000205.01.T01
Chr1	CDS	2841156	2841237	2841156	ID=MsG0180000205.01.T01:cds;Parent=MsG0180000205.01.T01
Chr1	CDS	2839414	2839497	2839414	ID=MsG0180000205.01.T01:cds;Parent=MsG0180000205.01.T01
Chr1	CDS	2838984	2839042	2838984	ID=MsG0180000205.01.T01:cds;Parent=MsG0180000205.01.T01
Chr1	three_prime_UTR	2838708	2838983	2838708	ID=MsG0180000205.01.T01:three_prime_utr;Parent=MsG0180000205.01.T01

Gene Sequence

>MsG0180000205.01.T01

TTGTCTCTCTGTTTCAAAATGGGAAGTGTGAACCGATCATGGGAGGAAGACATTTACTGGACCCATTTTCAGTTCATCCATTTCACTCAATTTCTTCGCAACACTGATTTTCAACAACAACTTGTTAGTATTCCCTTCATTCTTCTTTCCTTCCATGCACTTCCTAAAACATTTTCAGACAATTTAAAGAAGAAGTTGCCTGAAAATGTGAACCTTAAAGGTCCTAGTGGAGTTGTGTGGAATATAGGGCTGACAACTAAAGATGACACCGTTTACTTCACAAACGGTTGGCAAGGATTTGTGAATGATCACTCTTTGAAAGAGAGTGATCTCCTTTTTTTCAAGTACAATGGCGAATCGTTGTTTGAAGTTTTAATATTTCATGGCGAGACCTTATGCGAGAAAGCAGGCTCTTACTTTGTTAGAAAATGTGGAAAAGGTCATACTGAGCAAGAGGGCGACAAGGCAAAGGTTGCAAAGAATTCTGTTGAAGAAGTCAACACTGCTTCTAATGGCGGTGTTGAATGCGGTTCTGAGAAATTTCGGAAGCTTGACACTATAAGAACACCATTAGCTGTACCTTTCGAAAATACCAATGAAAAGACTTCTAATGCTGGTGTTGAGTCTGCTTCCCCTGAGCAGGTCATGGCTGATGCAGTCACTATTGCGAAGCGGGGAAGACCAGCAAAATCAGCTACTTCTGGCGAGAAAGCAATTGTTGATTGGGTGGCTTGTAGCAAGGAAAACTCAGATTTGATTCGTGATTCGGAAAATAGGTATTTCAATTCACAATTTGAATATCGATTTGATAACCCTGGTCCTAAGTTAGACTCGGGGAGCAAAGAGAAAGATGTTGATGATCGTGAAGATCGTGAAATTGAAGGTGGAAGCTGA

Protein sequence

>MsG0180000205.01.T01

LSLCFKMGSVNRSWEEDIYWTHFQFIHFTQFLRNTDFQQQLVSIPFILLSFHALPKTFSDNLKKKLPENVNLKGPSGVVWNIGLTTKDDTVYFTNGWQGFVNDHSLKESDLLFFKYNGESLFEVLIFHGETLCEKAGSYFVRKCGKGHTEQEGDKAKVAKNSVEEVNTASNGGVECGSEKFRKLDTIRTPLAVPFENTNEKTSNAGVESASPEQVMADAVTIAKRGRPAKSATSGEKAIVDWVACSKENSDLIRDSENRYFNSQFEYRFDNPGPKLDSGSKEKDVDDREDREIEGGS*