Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042207.01.T01 | GAU30769.1 | 90.526 | 95 | 8 | 1 | 6 | 99 | 165 | 259 | 1.13E-47 | 166 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042207.01.T01 | Q9SRT3 | 69.149 | 94 | 28 | 1 | 6 | 99 | 578 | 670 | 7.54E-32 | 122 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042207.01.T01 | A0A2Z6NGB1 | 90.526 | 95 | 8 | 1 | 6 | 99 | 165 | 259 | 5.40e-48 | 166 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048058.01 | MsG0880042207.01 | 0.804957 | 1.682876e-49 | 8.794586e-47 |
MsG0080048383.01 | MsG0880042207.01 | 0.832609 | 8.573782e-56 | 9.632006e-53 |
MsG0080048687.01 | MsG0880042207.01 | 0.801983 | 6.960522e-49 | 3.370141e-46 |
MsG0180000001.01 | MsG0880042207.01 | 0.823129 | 1.635296e-53 | 1.395894e-50 |
MsG0180000101.01 | MsG0880042207.01 | 0.813197 | 2.890843e-51 | 1.875409e-48 |
MsG0180000144.01 | MsG0880042207.01 | 0.822230 | 2.647368e-53 | 2.202711e-50 |
MsG0180000155.01 | MsG0880042207.01 | 0.800496 | 1.402816e-48 | 6.541397e-46 |
MsG0180000235.01 | MsG0880042207.01 | 0.803478 | 3.420077e-49 | 1.720451e-46 |
MsG0180000806.01 | MsG0880042207.01 | 0.808886 | 2.484197e-50 | 1.437126e-47 |
MsG0180000836.01 | MsG0880042207.01 | 0.806831 | 6.794841e-50 | 3.725471e-47 |
MsG0180001173.01 | MsG0880042207.01 | 0.805185 | 1.507837e-49 | 7.925606e-47 |
MsG0180001237.01 | MsG0880042207.01 | 0.807261 | 5.509914e-50 | 3.054918e-47 |
MsG0180001260.01 | MsG0880042207.01 | 0.807217 | 5.629702e-50 | 3.117718e-47 |
MsG0180001599.01 | MsG0880042207.01 | 0.833952 | 3.966879e-56 | 4.639820e-53 |
MsG0180001886.01 | MsG0880042207.01 | 0.803828 | 2.893606e-49 | 1.468767e-46 |
MsG0180003548.01 | MsG0880042207.01 | 0.803304 | 3.716131e-49 | 1.860955e-46 |
MsG0180003572.01 | MsG0880042207.01 | 0.819990 | 8.688167e-53 | 6.789770e-50 |
MsG0180003744.01 | MsG0880042207.01 | 0.824414 | 8.175267e-54 | 7.235937e-51 |
MsG0180004050.01 | MsG0880042207.01 | 0.852317 | 4.998657e-61 | 1.040530e-57 |
MsG0180004645.01 | MsG0880042207.01 | 0.807702 | 4.443652e-50 | 2.492029e-47 |
MsG0180004767.01 | MsG0880042207.01 | 0.811590 | 6.488057e-51 | 4.032134e-48 |
MsG0180004991.01 | MsG0880042207.01 | 0.803404 | 3.542480e-49 | 1.778653e-46 |
MsG0180005049.01 | MsG0880042207.01 | 0.831208 | 1.901816e-55 | 2.049657e-52 |
MsG0180005398.01 | MsG0880042207.01 | 0.805856 | 1.090437e-49 | 5.831672e-47 |
MsG0180005451.01 | MsG0880042207.01 | 0.803490 | 3.400069e-49 | 1.710932e-46 |
MsG0180005575.01 | MsG0880042207.01 | 0.809517 | 1.820101e-50 | 1.070873e-47 |
MsG0180005765.01 | MsG0880042207.01 | 0.820384 | 7.059021e-53 | 5.577360e-50 |
MsG0180005786.01 | MsG0880042207.01 | 0.802043 | 6.766174e-49 | 3.281155e-46 |
MsG0180006155.01 | MsG0880042207.01 | 0.816127 | 6.489516e-52 | 4.559450e-49 |
MsG0280006305.01 | MsG0880042207.01 | 0.821204 | 4.571351e-53 | 3.695174e-50 |
MsG0280006368.01 | MsG0880042207.01 | 0.800891 | 1.164878e-48 | 5.487075e-46 |
MsG0780040312.01 | MsG0880042207.01 | 0.815945 | 7.128472e-52 | 4.983235e-49 |
MsG0780040411.01 | MsG0880042207.01 | 0.806061 | 9.878635e-50 | 5.310628e-47 |
MsG0780040845.01 | MsG0880042207.01 | 0.865183 | 7.105416e-65 | 2.290912e-61 |
MsG0780041423.01 | MsG0880042207.01 | 0.817960 | 2.514401e-52 | 1.857472e-49 |
MsG0780041490.01 | MsG0880042207.01 | 0.806936 | 6.455675e-50 | 3.549102e-47 |
MsG0780041559.01 | MsG0880042207.01 | 0.800758 | 1.239910e-48 | 5.820298e-46 |
MsG0780041796.01 | MsG0880042207.01 | 0.826938 | 2.060878e-54 | 1.960774e-51 |
MsG0880042033.01 | MsG0880042207.01 | 0.809071 | 2.268231e-50 | 1.318753e-47 |
MsG0880042206.01 | MsG0880042207.01 | 0.849032 | 4.195181e-60 | 7.849547e-57 |
MsG0880042207.01 | MsG0880042552.01 | 0.804847 | 1.774549e-49 | 9.247342e-47 |
MsG0880042207.01 | MsG0880042760.01 | 0.801874 | 7.328710e-49 | 3.538925e-46 |
MsG0880042207.01 | MsG0880042829.01 | 0.813865 | 2.061563e-51 | 1.361961e-48 |
MsG0880042207.01 | MsG0880043532.01 | 0.803443 | 3.478132e-49 | 1.748035e-46 |
MsG0880042207.01 | MsG0880043816.01 | 0.811372 | 7.236645e-51 | 4.471664e-48 |
MsG0880042207.01 | MsG0880044975.01 | 0.835271 | 1.848874e-56 | 2.249851e-53 |
MsG0880042207.01 | MsG0880044990.01 | 0.843755 | 1.152868e-58 | 1.821809e-55 |
MsG0880042207.01 | MsG0880045145.01 | 0.823035 | 1.720168e-53 | 1.464470e-50 |
MsG0880042207.01 | MsG0880045393.01 | 0.814902 | 1.215855e-51 | 8.260721e-49 |
MsG0880042207.01 | MsG0880045619.01 | 0.814230 | 1.712952e-51 | 1.142884e-48 |
MsG0880042207.01 | MsG0880045656.01 | 0.835757 | 1.393336e-56 | 1.720239e-53 |
MsG0880042207.01 | MsG0880046113.01 | 0.802777 | 4.775834e-49 | 2.359854e-46 |
MsG0880042207.01 | MsG0880046684.01 | 0.833547 | 5.008031e-56 | 5.786411e-53 |
MsG0880042207.01 | MsG0880047212.01 | 0.800378 | 1.482582e-48 | 6.892961e-46 |
MsG0880042207.01 | MsG0880047391.01 | 0.807595 | 4.680894e-50 | 2.617690e-47 |
MsG0880042207.01 | MsG0880047470.01 | 0.827501 | 1.510890e-54 | 1.461298e-51 |
MsG0880042207.01 | MsG0880047472.01 | 0.809284 | 2.041679e-50 | 1.193837e-47 |
MsG0380013579.01 | MsG0880042207.01 | 0.820614 | 6.250422e-53 | 4.969468e-50 |
MsG0380014489.01 | MsG0880042207.01 | 0.820818 | 5.609695e-53 | 4.485773e-50 |
MsG0380014539.01 | MsG0880042207.01 | 0.805671 | 1.192767e-49 | 6.348424e-47 |
MsG0380014541.01 | MsG0880042207.01 | 0.803794 | 2.940615e-49 | 1.491320e-46 |
MsG0680031507.01 | MsG0880042207.01 | 0.853447 | 2.376120e-61 | 5.135746e-58 |
MsG0680031508.01 | MsG0880042207.01 | 0.805964 | 1.035191e-49 | 5.551370e-47 |
MsG0680031699.01 | MsG0880042207.01 | 0.851896 | 6.583081e-61 | 1.351913e-57 |
MsG0680031964.01 | MsG0880042207.01 | 0.809533 | 1.805537e-50 | 1.062783e-47 |
MsG0680033392.01 | MsG0880042207.01 | 0.802961 | 4.376176e-49 | 2.172390e-46 |
MsG0680034445.01 | MsG0880042207.01 | 0.804026 | 2.631259e-49 | 1.342461e-46 |
MsG0680035574.01 | MsG0880042207.01 | 0.814757 | 1.309578e-51 | 8.862845e-49 |
MsG0680035577.01 | MsG0880042207.01 | 0.802194 | 6.296866e-49 | 3.065311e-46 |
MsG0480018462.01 | MsG0880042207.01 | 0.801954 | 7.056599e-49 | 3.414182e-46 |
MsG0480018479.01 | MsG0880042207.01 | 0.831236 | 1.871655e-55 | 2.018799e-52 |
MsG0480019404.01 | MsG0880042207.01 | 0.802433 | 5.624745e-49 | 2.754964e-46 |
MsG0480020560.01 | MsG0880042207.01 | 0.819283 | 1.259668e-52 | 9.651423e-50 |
MsG0480020675.01 | MsG0880042207.01 | 0.822130 | 2.792129e-53 | 2.316591e-50 |
MsG0480021432.01 | MsG0880042207.01 | 0.838303 | 3.116484e-57 | 4.156564e-54 |
MsG0480021706.01 | MsG0880042207.01 | 0.808811 | 2.577603e-50 | 1.488229e-47 |
MsG0480021724.01 | MsG0880042207.01 | 0.812353 | 4.423936e-51 | 2.806545e-48 |
MsG0480022207.01 | MsG0880042207.01 | 0.800721 | 1.261892e-48 | 5.917863e-46 |
MsG0480022223.01 | MsG0880042207.01 | 0.818157 | 2.269916e-52 | 1.685955e-49 |
MsG0480022672.01 | MsG0880042207.01 | 0.827884 | 1.222424e-54 | 1.195552e-51 |
MsG0480022678.01 | MsG0880042207.01 | 0.821507 | 3.891722e-53 | 3.172081e-50 |
MsG0480022696.01 | MsG0880042207.01 | 0.818483 | 1.914849e-52 | 1.435128e-49 |
MsG0480022717.01 | MsG0880042207.01 | 0.811001 | 8.707721e-51 | 5.329040e-48 |
MsG0480023055.01 | MsG0880042207.01 | 0.810099 | 1.364296e-50 | 8.150982e-48 |
MsG0480023240.01 | MsG0880042207.01 | 0.809604 | 1.743403e-50 | 1.028175e-47 |
MsG0480023272.01 | MsG0880042207.01 | 0.811321 | 7.420855e-51 | 4.579218e-48 |
MsG0480023447.01 | MsG0880042207.01 | 0.812103 | 5.016012e-51 | 3.160566e-48 |
MsG0580024251.01 | MsG0880042207.01 | 0.804986 | 1.659567e-49 | 8.678795e-47 |
MsG0580024339.01 | MsG0880042207.01 | 0.840252 | 9.725930e-58 | 1.377476e-54 |
MsG0580024353.01 | MsG0880042207.01 | 0.825223 | 5.269666e-54 | 4.774123e-51 |
MsG0580024619.01 | MsG0880042207.01 | 0.802957 | 4.385025e-49 | 2.176527e-46 |
MsG0580024727.01 | MsG0880042207.01 | 0.817646 | 2.959594e-52 | 2.167627e-49 |
MsG0380015444.01 | MsG0880042207.01 | 0.807673 | 4.505681e-50 | 2.524941e-47 |
MsG0380016005.01 | MsG0880042207.01 | 0.828910 | 6.913429e-55 | 6.966103e-52 |
MsG0380016067.01 | MsG0880042207.01 | 0.822720 | 2.036609e-53 | 1.718445e-50 |
MsG0380016513.01 | MsG0880042207.01 | 0.818328 | 2.075363e-52 | 1.548826e-49 |
MsG0380016860.01 | MsG0880042207.01 | 0.807084 | 6.006562e-50 | 3.314849e-47 |
MsG0380016923.01 | MsG0880042207.01 | 0.801232 | 9.921368e-49 | 4.713621e-46 |
MsG0380016970.01 | MsG0880042207.01 | 0.814037 | 1.889233e-51 | 1.253952e-48 |
MsG0380016985.01 | MsG0880042207.01 | 0.819057 | 1.418417e-52 | 1.080059e-49 |
MsG0380017210.01 | MsG0880042207.01 | 0.804598 | 2.000599e-49 | 1.035763e-46 |
MsG0380017719.01 | MsG0880042207.01 | 0.813611 | 2.344402e-51 | 1.538273e-48 |
MsG0380017797.01 | MsG0880042207.01 | 0.800482 | 1.411959e-48 | 6.581627e-46 |
MsG0380018033.01 | MsG0880042207.01 | 0.820523 | 6.558603e-53 | 5.201413e-50 |
MsG0480018235.01 | MsG0880042207.01 | 0.846551 | 2.023528e-59 | 3.495686e-56 |
MsG0480018289.01 | MsG0880042207.01 | 0.800644 | 1.308507e-48 | 6.124675e-46 |
MsG0580026485.01 | MsG0880042207.01 | 0.810417 | 1.164852e-50 | 7.017447e-48 |
MsG0580030003.01 | MsG0880042207.01 | 0.807521 | 4.852732e-50 | 2.708822e-47 |
MsG0280007161.01 | MsG0880042207.01 | 0.812443 | 4.229052e-51 | 2.689451e-48 |
MsG0280007645.01 | MsG0880042207.01 | 0.804328 | 2.277231e-49 | 1.170825e-46 |
MsG0280007847.01 | MsG0880042207.01 | 0.807661 | 4.533498e-50 | 2.539674e-47 |
MsG0280008234.01 | MsG0880042207.01 | 0.808985 | 2.366064e-50 | 1.372435e-47 |
MsG0280008457.01 | MsG0880042207.01 | 0.804587 | 2.010916e-49 | 1.040819e-46 |
MsG0280008696.01 | MsG0880042207.01 | 0.819757 | 9.821833e-53 | 7.625984e-50 |
MsG0280008885.01 | MsG0880042207.01 | 0.804244 | 2.371000e-49 | 1.216332e-46 |
MsG0280009575.01 | MsG0880042207.01 | 0.811062 | 8.446329e-51 | 5.176863e-48 |
MsG0280010233.01 | MsG0880042207.01 | 0.800472 | 1.418071e-48 | 6.608523e-46 |
MsG0680035888.01 | MsG0880042207.01 | 0.821630 | 3.645568e-53 | 2.981794e-50 |
MsG0780036430.01 | MsG0880042207.01 | 0.812654 | 3.802466e-51 | 2.431443e-48 |
MsG0780037240.01 | MsG0880042207.01 | 0.844609 | 6.801044e-59 | 1.103904e-55 |
MsG0780038565.01 | MsG0880042207.01 | 0.813885 | 2.040972e-51 | 1.349085e-48 |
MsG0780038603.01 | MsG0880042207.01 | 0.826593 | 2.491540e-54 | 2.346836e-51 |
MsG0780039570.01 | MsG0880042207.01 | 0.812417 | 4.284515e-51 | 2.722802e-48 |
MsG0780039587.01 | MsG0880042207.01 | 0.802806 | 4.710505e-49 | 2.329306e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042207.01.T01 | MTR_8g012320 | 92.553 | 94 | 7 | 0 | 6 | 99 | 597 | 690 | 8.98e-51 | 172 |
MsG0880042207.01.T01 | MTR_4g006010 | 55.789 | 95 | 40 | 2 | 6 | 99 | 594 | 687 | 4.42e-19 | 83.6 |
MsG0880042207.01.T01 | MTR_3g109040 | 54.639 | 97 | 39 | 4 | 6 | 98 | 579 | 674 | 4.37e-18 | 80.9 |
MsG0880042207.01.T01 | MTR_3g109040 | 54.639 | 97 | 39 | 4 | 6 | 98 | 568 | 663 | 4.89e-18 | 80.5 |
MsG0880042207.01.T01 | MTR_6g007807 | 54.737 | 95 | 42 | 1 | 6 | 99 | 560 | 654 | 2.15e-15 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880042207.01.T01 | AT3G07330 | 69.149 | 94 | 28 | 1 | 6 | 99 | 578 | 670 | 7.69e-33 | 122 |
MsG0880042207.01.T01 | AT3G07330 | 69.149 | 94 | 28 | 1 | 6 | 99 | 578 | 670 | 7.69e-33 | 122 |
MsG0880042207.01.T01 | AT4G07960 | 47.872 | 94 | 45 | 1 | 6 | 99 | 598 | 687 | 2.72e-15 | 72.8 |
MsG0880042207.01.T01 | AT4G07960 | 47.872 | 94 | 45 | 1 | 6 | 99 | 598 | 687 | 2.72e-15 | 72.8 |
MsG0880042207.01.T01 | AT2G24630 | 51.546 | 97 | 42 | 3 | 6 | 99 | 584 | 678 | 2.50e-14 | 70.1 |
MsG0880042207.01.T01 | AT2G24630 | 51.546 | 97 | 42 | 3 | 6 | 99 | 584 | 678 | 2.50e-14 | 70.1 |
MsG0880042207.01.T01 | AT3G28180 | 44.643 | 112 | 38 | 3 | 6 | 99 | 556 | 661 | 1.36e-12 | 65.1 |
Find 28 sgRNAs with CRISPR-Local
Find 40 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACACTGATTTGCTGTAAAT+TGG | 0.221211 | 8:-5384630 | None:intergenic |
CATAGATCTTCCTCAGATTC+AGG | 0.261105 | 8:+5384254 | MsG0880042207.01.T01:CDS |
TAAGATGTTCTCAGTGGTTT+TGG | 0.282366 | 8:+5384604 | MsG0880042207.01.T01:CDS |
AAACTTACCCCTTGAAATAT+AGG | 0.333358 | 8:-5384427 | None:intergenic |
TATGTTCCAAGATAGGTTTA+AGG | 0.358919 | 8:-5384568 | None:intergenic |
AAATAAGTATGTTCCAAGAT+AGG | 0.371858 | 8:-5384575 | None:intergenic |
CTTCTACTTCCTATATTTCA+AGG | 0.388597 | 8:+5384418 | MsG0880042207.01.T01:CDS |
AGACTATTAGATCGCATTAG+AGG | 0.393143 | 8:-5384230 | None:intergenic |
AAGCAACAGTAGTGCAAATT+CGG | 0.394752 | 8:-5384664 | None:intergenic |
GCCAAACCTTAAACCTATCT+TGG | 0.394889 | 8:+5384562 | MsG0880042207.01.T01:CDS |
ATTAGATCGCATTAGAGGTT+CGG | 0.426256 | 8:-5384225 | None:intergenic |
TCCAAGATAGGTTTAAGGTT+TGG | 0.433090 | 8:-5384563 | None:intergenic |
CCTCATTGATTCATGATAAA+CGG | 0.441399 | 8:+5384531 | MsG0880042207.01.T01:CDS |
AAGGTCATCAGAGACAGATT+TGG | 0.442220 | 8:+5384184 | MsG0880042207.01.T01:CDS |
AAAACCACTGAGAACATCTT+AGG | 0.484602 | 8:-5384602 | None:intergenic |
AGATTTGGTTGCCTATGAAA+AGG | 0.488795 | 8:+5384199 | MsG0880042207.01.T01:CDS |
TTCTACTTCCTATATTTCAA+GGG | 0.498014 | 8:+5384419 | MsG0880042207.01.T01:CDS |
AGCAAATCAGTGTTGCTGCT+TGG | 0.500549 | 8:+5384639 | MsG0880042207.01.T01:CDS |
AGAAGCTTACTTTCTGCTCA+AGG | 0.508396 | 8:+5384389 | MsG0880042207.01.T01:CDS |
CTCTTCAATACCTGAATCTG+AGG | 0.585854 | 8:-5384264 | None:intergenic |
AACTTATAAAGCATATGACT+TGG | 0.590845 | 8:-5384720 | None:intergenic |
TCTACTTCCTATATTTCAAG+GGG | 0.613030 | 8:+5384420 | MsG0880042207.01.T01:CDS |
CCGTTTATCATGAATCAATG+AGG | 0.640950 | 8:-5384531 | None:intergenic |
TTGGAAGTTCTACGAATGGG+TGG | 0.653972 | 8:+5384143 | None:intergenic |
TGAGCCTAAGATGTTCTCAG+TGG | 0.656236 | 8:+5384598 | MsG0880042207.01.T01:CDS |
AGAAAGTAAGCTTCTAACCG+AGG | 0.657953 | 8:-5384381 | None:intergenic |
TTCATGATAAACGGTCACAG+TGG | 0.742556 | 8:+5384540 | MsG0880042207.01.T01:CDS |
ATGACTTGGCAACAACAACG+AGG | 0.769623 | 8:-5384706 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AAATAAGTATGTTCCAAGAT+AGG | - | Chr8:5384578-5384597 | None:intergenic | 25.0% |
! | TTCTACTTCCTATATTTCAA+GGG | + | Chr8:5384419-5384438 | MsG0880042207.01.T01:CDS | 25.0% |
!!! | ATTTATTTTGTTAACTGCCT+CGG | + | Chr8:5384364-5384383 | MsG0880042207.01.T01:CDS | 25.0% |
AAACTTACCCCTTGAAATAT+AGG | - | Chr8:5384430-5384449 | None:intergenic | 30.0% | |
CTTCTACTTCCTATATTTCA+AGG | + | Chr8:5384418-5384437 | MsG0880042207.01.T01:CDS | 30.0% | |
GTACAAAACAAAAACTAGGA+AGG | + | Chr8:5384165-5384184 | MsG0880042207.01.T01:CDS | 30.0% | |
TATGTTCCAAGATAGGTTTA+AGG | - | Chr8:5384571-5384590 | None:intergenic | 30.0% | |
TCTACTTCCTATATTTCAAG+GGG | + | Chr8:5384420-5384439 | MsG0880042207.01.T01:CDS | 30.0% | |
!! | AACACTGATTTGCTGTAAAT+TGG | - | Chr8:5384633-5384652 | None:intergenic | 30.0% |
!! | CCTCATTGATTCATGATAAA+CGG | + | Chr8:5384531-5384550 | MsG0880042207.01.T01:CDS | 30.0% |
AAAACCACTGAGAACATCTT+AGG | - | Chr8:5384605-5384624 | None:intergenic | 35.0% | |
AAGCAACAGTAGTGCAAATT+CGG | - | Chr8:5384667-5384686 | None:intergenic | 35.0% | |
AGACTATTAGATCGCATTAG+AGG | - | Chr8:5384233-5384252 | None:intergenic | 35.0% | |
ATTAGATCGCATTAGAGGTT+CGG | - | Chr8:5384228-5384247 | None:intergenic | 35.0% | |
CCGTTTATCATGAATCAATG+AGG | - | Chr8:5384534-5384553 | None:intergenic | 35.0% | |
GGTGGTACAAAACAAAAACT+AGG | + | Chr8:5384161-5384180 | MsG0880042207.01.T01:CDS | 35.0% | |
TGAATCAATGAGGATCTGAA+AGG | - | Chr8:5384524-5384543 | None:intergenic | 35.0% | |
! | AGATTTGGTTGCCTATGAAA+AGG | + | Chr8:5384199-5384218 | MsG0880042207.01.T01:CDS | 35.0% |
! | GTTTTGCATCCACTAAAAGT+TGG | - | Chr8:5384499-5384518 | None:intergenic | 35.0% |
! | TAAGATGTTCTCAGTGGTTT+TGG | + | Chr8:5384604-5384623 | MsG0880042207.01.T01:CDS | 35.0% |
! | TCCAAGATAGGTTTAAGGTT+TGG | - | Chr8:5384566-5384585 | None:intergenic | 35.0% |
!! | AGACGATTTTTCTTGGTCTT+TGG | - | Chr8:5384320-5384339 | None:intergenic | 35.0% |
!! | GTTGTTGGTCTTGATTTGAT+TGG | + | Chr8:5384454-5384473 | MsG0880042207.01.T01:intron | 35.0% |
AAGGTCATCAGAGACAGATT+TGG | + | Chr8:5384184-5384203 | MsG0880042207.01.T01:CDS | 40.0% | |
AGAAAGTAAGCTTCTAACCG+AGG | - | Chr8:5384384-5384403 | None:intergenic | 40.0% | |
AGAAGCTTACTTTCTGCTCA+AGG | + | Chr8:5384389-5384408 | MsG0880042207.01.T01:CDS | 40.0% | |
ATCAATGAGGATCTGAAAGG+AGG | - | Chr8:5384521-5384540 | None:intergenic | 40.0% | |
CATAGATCTTCCTCAGATTC+AGG | + | Chr8:5384254-5384273 | MsG0880042207.01.T01:CDS | 40.0% | |
CCAAGAAAAATCGTCTCTAC+AGG | + | Chr8:5384324-5384343 | MsG0880042207.01.T01:CDS | 40.0% | |
CTCTTCAATACCTGAATCTG+AGG | - | Chr8:5384267-5384286 | None:intergenic | 40.0% | |
GCCAAACCTTAAACCTATCT+TGG | + | Chr8:5384562-5384581 | MsG0880042207.01.T01:CDS | 40.0% | |
TTCATGATAAACGGTCACAG+TGG | + | Chr8:5384540-5384559 | MsG0880042207.01.T01:CDS | 40.0% | |
! | AGGTTCGGATTCCTTTTCAT+AGG | - | Chr8:5384213-5384232 | None:intergenic | 40.0% |
! | AGTTGAGCTCCAACTTTTAG+TGG | + | Chr8:5384487-5384506 | MsG0880042207.01.T01:intron | 40.0% |
! | CCTGTAGAGACGATTTTTCT+TGG | - | Chr8:5384327-5384346 | None:intergenic | 40.0% |
! | TCTTGATTTGATTGGAGAGC+AGG | + | Chr8:5384462-5384481 | MsG0880042207.01.T01:intron | 40.0% |
!! | GGGGTAAGTTTTCTTGTTGT+TGG | + | Chr8:5384439-5384458 | MsG0880042207.01.T01:intron | 40.0% |
TGAGCCTAAGATGTTCTCAG+TGG | + | Chr8:5384598-5384617 | MsG0880042207.01.T01:CDS | 45.0% | |
! | AGCAAATCAGTGTTGCTGCT+TGG | + | Chr8:5384639-5384658 | MsG0880042207.01.T01:CDS | 45.0% |
! | ATGACTTGGCAACAACAACG+AGG | - | Chr8:5384709-5384728 | None:intergenic | 45.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 5384158 | 5384739 | 5384158 | ID=MsG0880042207.01;Name=MsG0880042207.01 |
Chr8 | mRNA | 5384158 | 5384739 | 5384158 | ID=MsG0880042207.01.T01;Parent=MsG0880042207.01;Name=MsG0880042207.01.T01;_AED=0.46;_eAED=0.69;_QI=0|0|0|1|1|1|2|0|164 |
Chr8 | exon | 5384158 | 5384441 | 5384158 | ID=MsG0880042207.01.T01:exon:893;Parent=MsG0880042207.01.T01 |
Chr8 | exon | 5384529 | 5384739 | 5384529 | ID=MsG0880042207.01.T01:exon:894;Parent=MsG0880042207.01.T01 |
Chr8 | CDS | 5384158 | 5384441 | 5384158 | ID=MsG0880042207.01.T01:cds;Parent=MsG0880042207.01.T01 |
Chr8 | CDS | 5384529 | 5384739 | 5384529 | ID=MsG0880042207.01.T01:cds;Parent=MsG0880042207.01.T01 |
Gene Sequence |
Protein sequence |