Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001687.01.T01 | XP_013467004.1 | 94.678 | 357 | 16 | 2 | 1 | 354 | 1 | 357 | 0 | 666 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001687.01.T01 | A0A072VG82 | 94.678 | 357 | 16 | 2 | 1 | 354 | 1 | 357 | 0.0 | 666 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048461.01 | MsG0180001687.01 | 0.812206 | 4.764564e-51 | 3.010523e-48 |
| MsG0080048462.01 | MsG0180001687.01 | 0.809986 | 1.442977e-50 | 8.595999e-48 |
| MsG0080048769.01 | MsG0180001687.01 | 0.805974 | 1.029954e-49 | 5.524715e-47 |
| MsG0080048856.01 | MsG0180001687.01 | 0.805700 | 1.175943e-49 | 6.263853e-47 |
| MsG0180000145.01 | MsG0180001687.01 | 0.825031 | 5.849674e-54 | 5.270916e-51 |
| MsG0180000195.01 | MsG0180001687.01 | 0.803798 | 2.935181e-49 | 1.488718e-46 |
| MsG0180000332.01 | MsG0180001687.01 | 0.829370 | 5.347017e-55 | 5.462206e-52 |
| MsG0180000334.01 | MsG0180001687.01 | 0.847710 | 9.735940e-60 | 1.745651e-56 |
| MsG0180000335.01 | MsG0180001687.01 | 0.817241 | 3.651501e-52 | 2.644859e-49 |
| MsG0180000470.01 | MsG0180001687.01 | 0.805452 | 1.325890e-49 | 7.017296e-47 |
| MsG0180000806.01 | MsG0180001687.01 | 0.802904 | 4.496365e-49 | 2.228867e-46 |
| MsG0180001173.01 | MsG0180001687.01 | 0.816879 | 4.404893e-52 | 3.159213e-49 |
| MsG0180001687.01 | MsG0180002492.01 | 0.811377 | 7.217673e-51 | 4.460617e-48 |
| MsG0180001687.01 | MsG0180003444.01 | 0.800212 | 1.602011e-48 | 7.416770e-46 |
| MsG0180001687.01 | MsG0180003572.01 | 0.836787 | 7.625707e-57 | 9.711958e-54 |
| MsG0180001687.01 | MsG0180003669.01 | 0.815617 | 8.436148e-52 | 5.845434e-49 |
| MsG0180001687.01 | MsG0180003673.01 | 0.801414 | 9.107037e-49 | 4.346463e-46 |
| MsG0180001687.01 | MsG0180004272.01 | 0.832999 | 6.858298e-56 | 7.795764e-53 |
| MsG0180001687.01 | MsG0180004389.01 | 0.807446 | 5.034178e-50 | 2.804580e-47 |
| MsG0180001687.01 | MsG0180004996.01 | 0.810736 | 9.936278e-51 | 6.037452e-48 |
| MsG0180001687.01 | MsG0180005049.01 | 0.813204 | 2.881712e-51 | 1.869801e-48 |
| MsG0180001687.01 | MsG0180005445.01 | 0.831479 | 1.630492e-55 | 1.771620e-52 |
| MsG0180001687.01 | MsG0180005575.01 | 0.847531 | 1.090074e-59 | 1.943541e-56 |
| MsG0180001687.01 | MsG0180005954.01 | 0.808945 | 2.412822e-50 | 1.398053e-47 |
| MsG0180001687.01 | MsG0180006049.01 | 0.803761 | 2.988176e-49 | 1.514149e-46 |
| MsG0180001687.01 | MsG0280007101.01 | 0.801463 | 8.898439e-49 | 4.252193e-46 |
| MsG0180001687.01 | MsG0280007153.01 | 0.827762 | 1.307582e-54 | 1.274251e-51 |
| MsG0180001687.01 | MsG0280007955.01 | 0.809252 | 2.073988e-50 | 1.211712e-47 |
| MsG0180001687.01 | MsG0280008113.01 | 0.800041 | 1.735789e-48 | 8.001124e-46 |
| MsG0180001687.01 | MsG0280008615.01 | 0.846900 | 1.624052e-59 | 2.837088e-56 |
| MsG0180001687.01 | MsG0280008696.01 | 0.802102 | 6.580114e-49 | 3.195710e-46 |
| MsG0180001687.01 | MsG0280008909.01 | 0.810138 | 1.337777e-50 | 8.000597e-48 |
| MsG0180001687.01 | MsG0280008970.01 | 0.811331 | 7.386243e-51 | 4.558902e-48 |
| MsG0180001687.01 | MsG0280009748.01 | 0.808063 | 3.723673e-50 | 2.108135e-47 |
| MsG0180001687.01 | MsG0280009813.01 | 0.838839 | 2.265651e-57 | 3.071872e-54 |
| MsG0180001687.01 | MsG0280010233.01 | 0.803895 | 2.802156e-49 | 1.424854e-46 |
| MsG0180001687.01 | MsG0280010491.01 | 0.830539 | 2.774714e-55 | 2.931833e-52 |
| MsG0180001687.01 | MsG0280010531.01 | 0.801374 | 9.281797e-49 | 4.425451e-46 |
| MsG0180001687.01 | MsG0280011014.01 | 0.810914 | 9.094842e-51 | 5.552688e-48 |
| MsG0180001687.01 | MsG0280011070.01 | 0.801698 | 7.964301e-49 | 3.828374e-46 |
| MsG0180001687.01 | MsG0280011156.01 | 0.820635 | 6.179116e-53 | 4.915593e-50 |
| MsG0180001687.01 | MsG0280011388.01 | 0.834150 | 3.540338e-56 | 4.164681e-53 |
| MsG0180001687.01 | MsG0380012057.01 | 0.811806 | 5.824183e-51 | 3.640268e-48 |
| MsG0180001687.01 | MsG0380013475.01 | 0.812156 | 4.885013e-51 | 3.082544e-48 |
| MsG0180001687.01 | MsG0380013549.01 | 0.802988 | 4.320762e-49 | 2.146266e-46 |
| MsG0180001687.01 | MsG0380013834.01 | 0.810563 | 1.083416e-50 | 6.552365e-48 |
| MsG0180001687.01 | MsG0380014573.01 | 0.807369 | 5.228885e-50 | 2.907090e-47 |
| MsG0180001687.01 | MsG0380014701.01 | 0.807086 | 6.000343e-50 | 3.311559e-47 |
| MsG0180001687.01 | MsG0380015332.01 | 0.812331 | 4.474269e-51 | 2.836774e-48 |
| MsG0180001687.01 | MsG0380015564.01 | 0.801607 | 8.315375e-49 | 3.987886e-46 |
| MsG0180001687.01 | MsG0380016131.01 | 0.845067 | 5.115645e-59 | 8.424859e-56 |
| MsG0180001687.01 | MsG0380016247.01 | 0.812253 | 4.653378e-51 | 2.944106e-48 |
| MsG0180001687.01 | MsG0380016517.01 | 0.820823 | 5.594282e-53 | 4.474143e-50 |
| MsG0180001687.01 | MsG0380016970.01 | 0.827830 | 1.259793e-54 | 1.230083e-51 |
| MsG0180001687.01 | MsG0380017039.01 | 0.806288 | 8.847176e-50 | 4.783721e-47 |
| MsG0180001687.01 | MsG0380017797.01 | 0.803520 | 3.351940e-49 | 1.688048e-46 |
| MsG0180001687.01 | MsG0480018183.01 | 0.810371 | 1.191541e-50 | 7.169668e-48 |
| MsG0180001687.01 | MsG0480018894.01 | 0.831350 | 1.754697e-55 | 1.899178e-52 |
| MsG0180001687.01 | MsG0480020675.01 | 0.809250 | 2.076453e-50 | 1.213075e-47 |
| MsG0180001687.01 | MsG0480020780.01 | 0.823205 | 1.569834e-53 | 1.342822e-50 |
| MsG0180001687.01 | MsG0480020879.01 | 0.809976 | 1.449814e-50 | 8.634320e-48 |
| MsG0180001687.01 | MsG0480020907.01 | 0.822247 | 2.624099e-53 | 2.184382e-50 |
| MsG0180001687.01 | MsG0480021056.01 | 0.814725 | 1.331273e-51 | 9.002200e-49 |
| MsG0180001687.01 | MsG0480021452.01 | 0.813811 | 2.118843e-51 | 1.397795e-48 |
| MsG0180001687.01 | MsG0480021464.01 | 0.829663 | 4.537131e-55 | 4.674461e-52 |
| MsG0180001687.01 | MsG0480021778.01 | 0.819917 | 9.030360e-53 | 7.042822e-50 |
| MsG0180001687.01 | MsG0480021917.01 | 0.810262 | 1.258147e-50 | 7.548768e-48 |
| MsG0180001687.01 | MsG0480022054.01 | 0.803403 | 3.544459e-49 | 1.779613e-46 |
| MsG0180001687.01 | MsG0480022068.01 | 0.803689 | 3.091542e-49 | 1.563640e-46 |
| MsG0180001687.01 | MsG0480022115.01 | 0.804273 | 2.338011e-49 | 1.200374e-46 |
| MsG0180001687.01 | MsG0480022164.01 | 0.802021 | 6.836070e-49 | 3.313204e-46 |
| MsG0180001687.01 | MsG0480022696.01 | 0.813945 | 1.979029e-51 | 1.310234e-48 |
| MsG0180001687.01 | MsG0480022825.01 | 0.802792 | 4.741907e-49 | 2.343979e-46 |
| MsG0180001687.01 | MsG0480022855.01 | 0.835939 | 1.252700e-56 | 1.555010e-53 |
| MsG0180001687.01 | MsG0480023172.01 | 0.800712 | 1.267052e-48 | 5.940624e-46 |
| MsG0180001687.01 | MsG0480023463.01 | 0.802105 | 6.568351e-49 | 3.190276e-46 |
| MsG0180001687.01 | MsG0480023600.01 | 0.806584 | 7.662881e-50 | 4.174643e-47 |
| MsG0180001687.01 | MsG0580024409.01 | 0.813269 | 2.787470e-51 | 1.811925e-48 |
| MsG0180001687.01 | MsG0580024418.01 | 0.820688 | 6.008635e-53 | 4.787165e-50 |
| MsG0180001687.01 | MsG0580024727.01 | 0.830075 | 3.601171e-55 | 3.754289e-52 |
| MsG0180001687.01 | MsG0580024819.01 | 0.810726 | 9.986260e-51 | 6.066179e-48 |
| MsG0180001687.01 | MsG0580025758.01 | 0.812893 | 3.371813e-51 | 2.169645e-48 |
| MsG0180001687.01 | MsG0580026002.01 | 0.818565 | 1.834018e-52 | 1.377637e-49 |
| MsG0180001687.01 | MsG0580027320.01 | 0.848735 | 5.069954e-60 | 9.394865e-57 |
| MsG0180001687.01 | MsG0580028517.01 | 0.827882 | 1.224178e-54 | 1.197169e-51 |
| MsG0180001687.01 | MsG0580028991.01 | 0.805440 | 1.333608e-49 | 7.055786e-47 |
| MsG0180001687.01 | MsG0580029729.01 | 0.831069 | 2.056459e-55 | 2.207362e-52 |
| MsG0180001687.01 | MsG0680030321.01 | 0.800371 | 1.487185e-48 | 6.913181e-46 |
| MsG0180001687.01 | MsG0680030413.01 | 0.802938 | 4.424205e-49 | 2.194899e-46 |
| MsG0180001687.01 | MsG0680030447.01 | 0.820844 | 5.533150e-53 | 4.427861e-50 |
| MsG0180001687.01 | MsG0680031133.01 | 0.842608 | 2.331183e-58 | 3.553432e-55 |
| MsG0180001687.01 | MsG0680031505.01 | 0.805141 | 1.540105e-49 | 8.086254e-47 |
| MsG0180001687.01 | MsG0680031617.01 | 0.807682 | 4.486858e-50 | 2.514946e-47 |
| MsG0180001687.01 | MsG0680031628.01 | 0.801451 | 8.949713e-49 | 4.275465e-46 |
| MsG0180001687.01 | MsG0680032203.01 | 0.804234 | 2.382582e-49 | 1.221961e-46 |
| MsG0180001687.01 | MsG0680034918.01 | 0.813710 | 2.230194e-51 | 1.467239e-48 |
| MsG0180001687.01 | MsG0680035048.01 | 0.809737 | 1.631773e-50 | 9.657485e-48 |
| MsG0180001687.01 | MsG0680035346.01 | 0.809322 | 2.004141e-50 | 1.173061e-47 |
| MsG0180001687.01 | MsG0680035475.01 | 0.833698 | 4.593921e-56 | 5.331306e-53 |
| MsG0180001687.01 | MsG0680035573.01 | 0.818861 | 1.571819e-52 | 1.190456e-49 |
| MsG0180001687.01 | MsG0680035876.01 | 0.824918 | 6.221435e-54 | 5.587759e-51 |
| MsG0180001687.01 | MsG0780036340.01 | 0.814854 | 1.246492e-51 | 8.457878e-49 |
| MsG0180001687.01 | MsG0780036477.01 | 0.804634 | 1.966012e-49 | 1.018787e-46 |
| MsG0180001687.01 | MsG0780036719.01 | 0.837952 | 3.835508e-57 | 5.062122e-54 |
| MsG0180001687.01 | MsG0780036810.01 | 0.845669 | 3.516621e-59 | 5.904599e-56 |
| MsG0180001687.01 | MsG0780037054.01 | 0.817885 | 2.615013e-52 | 1.927825e-49 |
| MsG0180001687.01 | MsG0780037141.01 | 0.809265 | 2.061162e-50 | 1.204610e-47 |
| MsG0180001687.01 | MsG0780037240.01 | 0.801846 | 7.426462e-49 | 3.583479e-46 |
| MsG0180001687.01 | MsG0780038386.01 | 0.802544 | 5.335859e-49 | 2.620784e-46 |
| MsG0180001687.01 | MsG0780038602.01 | 0.809052 | 2.288803e-50 | 1.330041e-47 |
| MsG0180001687.01 | MsG0780038603.01 | 0.848316 | 6.624131e-60 | 1.210819e-56 |
| MsG0180001687.01 | MsG0780039170.01 | 0.806231 | 9.093765e-50 | 4.910176e-47 |
| MsG0180001687.01 | MsG0780039423.01 | 0.827960 | 1.172169e-54 | 1.149016e-51 |
| MsG0180001687.01 | MsG0780039443.01 | 0.818092 | 2.347651e-52 | 1.740520e-49 |
| MsG0180001687.01 | MsG0780040344.01 | 0.843085 | 1.740664e-58 | 2.692918e-55 |
| MsG0180001687.01 | MsG0780040347.01 | 0.817249 | 3.636915e-52 | 2.634850e-49 |
| MsG0180001687.01 | MsG0780040529.01 | 0.809648 | 1.705368e-50 | 1.006926e-47 |
| MsG0180001687.01 | MsG0780041016.01 | 0.836700 | 8.022543e-57 | 1.019021e-53 |
| MsG0180001687.01 | MsG0780041065.01 | 0.834540 | 2.825181e-56 | 3.363299e-53 |
| MsG0180001687.01 | MsG0780041134.01 | 0.804919 | 1.714356e-49 | 8.950431e-47 |
| MsG0180001687.01 | MsG0780041220.01 | 0.813167 | 2.935096e-51 | 1.902550e-48 |
| MsG0180001687.01 | MsG0780041559.01 | 0.808479 | 3.034678e-50 | 1.737077e-47 |
| MsG0180001687.01 | MsG0880042129.01 | 0.802497 | 5.454548e-49 | 2.675876e-46 |
| MsG0180001687.01 | MsG0880042518.01 | 0.821189 | 4.609460e-53 | 3.724336e-50 |
| MsG0180001687.01 | MsG0880042760.01 | 0.806539 | 7.833578e-50 | 4.262813e-47 |
| MsG0180001687.01 | MsG0880042779.01 | 0.820514 | 6.590670e-53 | 5.225552e-50 |
| MsG0180001687.01 | MsG0880043816.01 | 0.821381 | 4.161897e-53 | 3.380422e-50 |
| MsG0180001687.01 | MsG0880043937.01 | 0.808311 | 3.297117e-50 | 1.878936e-47 |
| MsG0180001687.01 | MsG0880043985.01 | 0.810501 | 1.117069e-50 | 6.744717e-48 |
| MsG0180001687.01 | MsG0880043992.01 | 0.841671 | 4.126002e-58 | 6.106296e-55 |
| MsG0180001687.01 | MsG0880043994.01 | 0.817743 | 2.814192e-52 | 2.066727e-49 |
| MsG0180001687.01 | MsG0880044075.01 | 0.805764 | 1.140314e-49 | 6.083941e-47 |
| MsG0180001687.01 | MsG0880044237.01 | 0.819079 | 1.401790e-52 | 1.068019e-49 |
| MsG0180001687.01 | MsG0880044415.01 | 0.824311 | 8.647126e-54 | 7.630690e-51 |
| MsG0180001687.01 | MsG0880044477.01 | 0.802006 | 6.883716e-49 | 3.335043e-46 |
| MsG0180001687.01 | MsG0880044510.01 | 0.815895 | 7.312109e-52 | 5.104554e-49 |
| MsG0180001687.01 | MsG0880044542.01 | 0.819952 | 8.862879e-53 | 6.919029e-50 |
| MsG0180001687.01 | MsG0880044555.01 | 0.822204 | 2.683896e-53 | 2.231479e-50 |
| MsG0180001687.01 | MsG0880044782.01 | 0.823814 | 1.131040e-53 | 9.843564e-51 |
| MsG0180001687.01 | MsG0880045145.01 | 0.815179 | 1.055394e-51 | 7.224452e-49 |
| MsG0180001687.01 | MsG0880045736.01 | 0.807697 | 4.452922e-50 | 2.496904e-47 |
| MsG0180001687.01 | MsG0880046901.01 | 0.813220 | 2.857940e-51 | 1.855177e-48 |
| MsG0180001687.01 | MsG0880047191.01 | 0.807387 | 5.180823e-50 | 2.881906e-47 |
| MsG0180001687.01 | MsG0880047391.01 | 0.815877 | 7.382149e-52 | 5.150963e-49 |
| MsG0180001687.01 | MsG0880047473.01 | 0.806007 | 1.013612e-49 | 5.441774e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001687.01.T01 | MTR_1g041155 | 94.678 | 357 | 16 | 2 | 1 | 354 | 1 | 357 | 0.0 | 666 |
| MsG0180001687.01.T01 | MTR_1g076500 | 57.702 | 383 | 124 | 13 | 1 | 347 | 1 | 381 | 7.78e-131 | 379 |
| MsG0180001687.01.T01 | MTR_7g095960 | 45.257 | 369 | 167 | 12 | 4 | 354 | 5 | 356 | 8.54e-91 | 276 |
| MsG0180001687.01.T01 | MTR_1g070970 | 45.405 | 370 | 155 | 11 | 4 | 352 | 5 | 348 | 1.70e-88 | 270 |
| MsG0180001687.01.T01 | MTR_4g132963 | 35.211 | 213 | 122 | 2 | 60 | 272 | 38 | 234 | 7.57e-37 | 134 |
| MsG0180001687.01.T01 | MTR_4g132940 | 35.211 | 213 | 122 | 2 | 60 | 272 | 38 | 234 | 7.57e-37 | 134 |
| MsG0180001687.01.T01 | MTR_8g093440 | 41.549 | 142 | 76 | 1 | 153 | 287 | 20 | 161 | 8.45e-37 | 132 |
| MsG0180001687.01.T01 | MTR_8g093440 | 41.549 | 142 | 76 | 1 | 153 | 287 | 82 | 223 | 2.09e-36 | 133 |
| MsG0180001687.01.T01 | MTR_7g083080 | 35.371 | 229 | 107 | 8 | 64 | 273 | 50 | 256 | 6.27e-35 | 130 |
| MsG0180001687.01.T01 | MTR_4g132970 | 41.353 | 133 | 78 | 0 | 155 | 287 | 138 | 270 | 1.27e-34 | 129 |
| MsG0180001687.01.T01 | MTR_2g025520 | 43.478 | 138 | 74 | 1 | 161 | 298 | 142 | 275 | 1.70e-33 | 126 |
| MsG0180001687.01.T01 | MTR_2g013780 | 42.520 | 127 | 67 | 2 | 153 | 273 | 143 | 269 | 7.15e-33 | 125 |
| MsG0180001687.01.T01 | MTR_4g078310 | 40.476 | 126 | 66 | 2 | 153 | 270 | 119 | 243 | 3.16e-30 | 117 |
| MsG0180001687.01.T01 | MTR_8g012240 | 31.513 | 238 | 126 | 8 | 53 | 273 | 41 | 258 | 2.21e-29 | 115 |
| MsG0180001687.01.T01 | MTR_4g088770 | 37.008 | 127 | 74 | 2 | 153 | 273 | 149 | 275 | 3.47e-29 | 115 |
| MsG0180001687.01.T01 | MTR_4g088760 | 37.008 | 127 | 74 | 2 | 153 | 273 | 202 | 328 | 1.10e-28 | 114 |
| MsG0180001687.01.T01 | MTR_2g013880 | 30.818 | 159 | 104 | 2 | 126 | 278 | 116 | 274 | 2.26e-27 | 110 |
| MsG0180001687.01.T01 | MTR_7g053310 | 30.396 | 227 | 126 | 8 | 61 | 274 | 40 | 247 | 5.52e-27 | 108 |
| MsG0180001687.01.T01 | MTR_5g008720 | 35.484 | 124 | 74 | 1 | 153 | 270 | 97 | 220 | 3.11e-24 | 100 |
| MsG0180001687.01.T01 | MTR_1g103610 | 85.294 | 34 | 5 | 0 | 255 | 288 | 1 | 34 | 1.14e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001687.01.T01 | AT3G22970 | 49.600 | 375 | 156 | 9 | 4 | 354 | 5 | 370 | 5.88e-106 | 315 |
| MsG0180001687.01.T01 | AT4G14620 | 50.829 | 362 | 141 | 14 | 4 | 352 | 2 | 339 | 1.39e-95 | 288 |
| MsG0180001687.01.T01 | AT2G38820 | 43.438 | 320 | 149 | 8 | 4 | 306 | 5 | 309 | 2.20e-83 | 256 |
| MsG0180001687.01.T01 | AT3G22970 | 52.000 | 250 | 94 | 5 | 118 | 354 | 23 | 259 | 6.50e-75 | 232 |
| MsG0180001687.01.T01 | AT3G54550 | 41.516 | 277 | 138 | 8 | 5 | 272 | 6 | 267 | 4.77e-61 | 197 |
| MsG0180001687.01.T01 | AT3G07350 | 32.411 | 253 | 150 | 6 | 51 | 290 | 34 | 278 | 8.68e-35 | 129 |
| MsG0180001687.01.T01 | AT2G38820 | 39.691 | 194 | 96 | 5 | 4 | 184 | 5 | 190 | 4.52e-34 | 125 |
| MsG0180001687.01.T01 | AT2G39650 | 43.089 | 123 | 64 | 1 | 157 | 273 | 52 | 174 | 1.39e-31 | 119 |
| MsG0180001687.01.T01 | AT3G25240 | 33.778 | 225 | 129 | 5 | 57 | 273 | 30 | 242 | 1.43e-31 | 120 |
| MsG0180001687.01.T01 | AT2G39650 | 43.089 | 123 | 64 | 1 | 157 | 273 | 114 | 236 | 3.16e-31 | 120 |
| MsG0180001687.01.T01 | AT4G32480 | 40.984 | 122 | 66 | 2 | 157 | 272 | 120 | 241 | 2.44e-28 | 112 |
| MsG0180001687.01.T01 | AT1G62420 | 30.698 | 215 | 121 | 6 | 64 | 272 | 38 | 230 | 1.71e-27 | 109 |
| MsG0180001687.01.T01 | AT2G20670 | 40.351 | 114 | 62 | 1 | 165 | 272 | 130 | 243 | 9.08e-27 | 108 |
| MsG0180001687.01.T01 | AT1G77145 | 34.932 | 146 | 77 | 2 | 150 | 277 | 72 | 217 | 1.28e-25 | 103 |
| MsG0180001687.01.T01 | AT1G77160 | 34.932 | 146 | 77 | 2 | 150 | 277 | 22 | 167 | 1.50e-25 | 102 |
| MsG0180001687.01.T01 | AT1G77160 | 30.387 | 181 | 105 | 3 | 118 | 277 | 42 | 222 | 3.27e-25 | 103 |
| MsG0180001687.01.T01 | AT1G12030 | 38.938 | 113 | 68 | 1 | 161 | 272 | 118 | 230 | 1.29e-24 | 102 |
| MsG0180001687.01.T01 | AT1G77145 | 34.400 | 125 | 72 | 1 | 186 | 300 | 59 | 183 | 1.80e-20 | 88.6 |
Find 93 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGTTTGCTTGGCGAAAA+TGG | 0.121680 | 1:-25259391 | MsG0180001687.01.T01:CDS |
| CATCCATTTGCAAATCAAAA+TGG | 0.188560 | 1:-25258977 | MsG0180001687.01.T01:CDS |
| AATATTGAGAAGAAGATTAA+TGG | 0.269219 | 1:-25259589 | MsG0180001687.01.T01:exon |
| AGACGAGCATTGTTAATTTC+CGG | 0.316405 | 1:+25259860 | None:intergenic |
| TTCTCTGAATCTATGTCAAT+TGG | 0.321455 | 1:+25259549 | None:intergenic |
| TTCAACCTCCACTTCGAAAC+TGG | 0.330861 | 1:+25259498 | None:intergenic |
| TAAAGAGAAAATTTCGGATA+AGG | 0.343195 | 1:-25258259 | MsG0180001687.01.T01:three_prime_UTR |
| AAAGTTATGGTTAGAAGAAA+AGG | 0.343989 | 1:+25259803 | None:intergenic |
| GCCGCATCGGAGACTTGCTT+TGG | 0.348894 | 1:+25258564 | None:intergenic |
| CTTCTAGGCTAAGAAAGTTA+TGG | 0.360468 | 1:+25259790 | None:intergenic |
| TCGGAGATGGATAGTGATTC+TGG | 0.371484 | 1:-25258522 | MsG0180001687.01.T01:CDS |
| TTCAAATTCAAATTAAACTT+TGG | 0.377537 | 1:+25258040 | None:intergenic |
| GAGTCCAGCGTGGCAGTTAC+CGG | 0.378357 | 1:-25258427 | MsG0180001687.01.T01:CDS |
| TCTTTAGTTGTATTGTTCTT+CGG | 0.398419 | 1:+25259447 | None:intergenic |
| ATCCATTTGCAAATCAAAAT+GGG | 0.412073 | 1:-25258976 | MsG0180001687.01.T01:CDS |
| ATTCCTCTTTCTCCACTCTT+CGG | 0.414096 | 1:+25258396 | None:intergenic |
| GTTGTATTGTTCTTCGGAAA+AGG | 0.417479 | 1:+25259453 | None:intergenic |
| GGATAGTGATTCTGGTGAAT+TGG | 0.431933 | 1:-25258514 | MsG0180001687.01.T01:CDS |
| AGTCTCCGATGCGGCGGCGG+TGG | 0.440423 | 1:-25258556 | MsG0180001687.01.T01:CDS |
| GCTGAAAGGCTTCAATCTCT+TGG | 0.450984 | 1:-25259008 | MsG0180001687.01.T01:CDS |
| CTTAACTGAGTCAGTTGAAT+CGG | 0.458623 | 1:+25259236 | None:intergenic |
| CCACTCTTCGGTTTCACCGC+CGG | 0.460603 | 1:+25258408 | None:intergenic |
| GAAAACATGACGACGGTGAT+CGG | 0.464495 | 1:+25259835 | None:intergenic |
| CGATTCAACTGACTCAGTTA+AGG | 0.466446 | 1:-25259235 | MsG0180001687.01.T01:intron |
| TTCGCCAAGCAAACAGAGCT+TGG | 0.466708 | 1:+25259396 | None:intergenic |
| AATTCAAATTAAACTTTGGA+TGG | 0.470357 | 1:+25258044 | None:intergenic |
| GAGTGGAGAAAGAGGAATGA+AGG | 0.472925 | 1:-25258391 | MsG0180001687.01.T01:CDS |
| GGAACCAAGCTCTGTTTGCT+TGG | 0.476354 | 1:-25259400 | MsG0180001687.01.T01:CDS |
| CGCCGGAAAATTCATATCTC+CGG | 0.488913 | 1:+25259895 | None:intergenic |
| CTGAATCTATGTCAATTGGT+TGG | 0.492657 | 1:+25259553 | None:intergenic |
| TCCGGCGATATTTACTTCAC+CGG | 0.494398 | 1:-25259879 | MsG0180001687.01.T01:five_prime_UTR |
| GCAAGTCTCCGATGCGGCGG+CGG | 0.496129 | 1:-25258559 | MsG0180001687.01.T01:CDS |
| CGTCACCGTCGTGTCGGAGG+CGG | 0.500832 | 1:-25258682 | MsG0180001687.01.T01:CDS |
| CGAGACGGTGGTTGAAGTTG+CGG | 0.502860 | 1:+25259339 | None:intergenic |
| TTAGAAGAAAAGGAGTTTCG+TGG | 0.502868 | 1:+25259813 | None:intergenic |
| GAAAGAGGAATGAAGGTGAC+TGG | 0.504774 | 1:-25258384 | MsG0180001687.01.T01:CDS |
| TGGATTAGCTTCTTTGCTGA+AGG | 0.511501 | 1:-25258364 | MsG0180001687.01.T01:CDS |
| GGAGAAAGCTTCGCCGGAGG+AGG | 0.512134 | 1:-25258475 | MsG0180001687.01.T01:CDS |
| TGGTGGTGGAGTTGCTGAGT+TGG | 0.512259 | 1:-25259421 | MsG0180001687.01.T01:CDS |
| TTCGCCGGAGGAGGTAGTTA+CGG | 0.512281 | 1:-25258466 | MsG0180001687.01.T01:CDS |
| TGCTTTGGCCTAGCTGCCGA+CGG | 0.512808 | 1:+25258579 | None:intergenic |
| AAGAACAATACAACTAAAGA+TGG | 0.517486 | 1:-25259444 | MsG0180001687.01.T01:CDS |
| AAGCAGAGTTTGAAGAAGAA+AGG | 0.517627 | 1:-25258657 | MsG0180001687.01.T01:CDS |
| AAAACAAATTCATGTCCTGC+TGG | 0.520750 | 1:-25258951 | MsG0180001687.01.T01:intron |
| ACCGCCGGTAACTGCCACGC+TGG | 0.521213 | 1:+25258423 | None:intergenic |
| GGATCTCTCCGTCGGCAGCT+AGG | 0.526135 | 1:-25258587 | MsG0180001687.01.T01:CDS |
| GAAAATGGTTCAGAGTTTCA+TGG | 0.527012 | 1:-25259376 | MsG0180001687.01.T01:CDS |
| GGAAACAGTTTCATCGGAGA+TGG | 0.529754 | 1:-25258535 | MsG0180001687.01.T01:CDS |
| TGTTTCCACCGCCGCCGCAT+CGG | 0.530760 | 1:+25258551 | None:intergenic |
| GGTGGTTGAAGTTGCGGTTG+CGG | 0.536574 | 1:+25259345 | None:intergenic |
| ACAACTAAAGATGGTGGTGG+TGG | 0.541945 | 1:-25259435 | MsG0180001687.01.T01:CDS |
| TCAATTCATTGATGCGATTG+TGG | 0.553988 | 1:-25258838 | MsG0180001687.01.T01:CDS |
| TGGTGAGGAGAAAGCTTCGC+CGG | 0.554242 | 1:-25258481 | MsG0180001687.01.T01:CDS |
| TTTCGAAGTGGAGGTTGAAG+AGG | 0.556890 | 1:-25259494 | MsG0180001687.01.T01:CDS |
| AAACCGAAGAGTGGAGAAAG+AGG | 0.557271 | 1:-25258399 | MsG0180001687.01.T01:CDS |
| GGCGGTGGAAACAGTTTCAT+CGG | 0.564665 | 1:-25258541 | MsG0180001687.01.T01:CDS |
| CGTTCTTCAACACTTACACA+AGG | 0.565445 | 1:+25259113 | None:intergenic |
| GAAGATGATTTCGATTTCAA+CGG | 0.567151 | 1:-25259279 | MsG0180001687.01.T01:CDS |
| TGATTAAGATCGTTGCTGAA+AGG | 0.568501 | 1:-25259022 | MsG0180001687.01.T01:CDS |
| CTTGTGTAAGTGTTGAAGAA+CGG | 0.570166 | 1:-25259112 | MsG0180001687.01.T01:CDS |
| TCCGGTGAAGTAAATATCGC+CGG | 0.580411 | 1:+25259878 | None:intergenic |
| TCAATTGGTTGGATCTTCAA+CGG | 0.580989 | 1:+25259564 | None:intergenic |
| ATGTAATCGCGCTTCCTCCA+CGG | 0.582747 | 1:+25258621 | None:intergenic |
| TTCATTGATGCGATTGTGGA+AGG | 0.586622 | 1:-25258834 | MsG0180001687.01.T01:CDS |
| ATGAACCAGTTTCGAAGTGG+AGG | 0.593261 | 1:-25259503 | MsG0180001687.01.T01:CDS |
| GCCGCCGTAACTACCTCCTC+CGG | 0.598847 | 1:+25258462 | None:intergenic |
| GATCGTCACCGTCGTGTCGG+AGG | 0.603839 | 1:-25258685 | MsG0180001687.01.T01:CDS |
| ATTTCGAATCAGTTCCGTAG+TGG | 0.606582 | 1:+25259524 | None:intergenic |
| GCAGATCGTCACCGTCGTGT+CGG | 0.612036 | 1:-25258688 | MsG0180001687.01.T01:CDS |
| AGATTCAGAGAAAGCCACTA+CGG | 0.617727 | 1:-25259538 | MsG0180001687.01.T01:CDS |
| AGCGAAGTGGATCTCTCCGT+CGG | 0.622895 | 1:-25258595 | MsG0180001687.01.T01:CDS |
| AAAGCAAGTCTCCGATGCGG+CGG | 0.623703 | 1:-25258562 | MsG0180001687.01.T01:CDS |
| CCGGCGGTGAAACCGAAGAG+TGG | 0.624843 | 1:-25258408 | MsG0180001687.01.T01:CDS |
| GAATGCATGTTCCGCCGTGG+AGG | 0.625206 | 1:-25258635 | MsG0180001687.01.T01:CDS |
| AACAATACAACTAAAGATGG+TGG | 0.627234 | 1:-25259441 | MsG0180001687.01.T01:CDS |
| GAAATCGAAATCATCTTCGT+CGG | 0.627970 | 1:+25259284 | None:intergenic |
| GAAATGAACCAGTTTCGAAG+TGG | 0.634899 | 1:-25259506 | MsG0180001687.01.T01:CDS |
| AATACAACTAAAGATGGTGG+TGG | 0.640992 | 1:-25259438 | MsG0180001687.01.T01:CDS |
| CTTCGCCGCCTCCGACACGA+CGG | 0.649693 | 1:+25258677 | None:intergenic |
| GCGATTACATGTTAGCGAAG+TGG | 0.650775 | 1:-25258608 | MsG0180001687.01.T01:CDS |
| AGTTACGGCGGCGACAGCGA+CGG | 0.655061 | 1:-25258451 | MsG0180001687.01.T01:CDS |
| TCCAGCGTGGCAGTTACCGG+CGG | 0.657779 | 1:-25258424 | MsG0180001687.01.T01:CDS |
| CAGTTGCAGCGGTTACGAGA+CGG | 0.659954 | 1:+25259324 | None:intergenic |
| TAGCGTTGAAACAGTTGCAG+CGG | 0.661984 | 1:+25259313 | None:intergenic |
| AAGGAATGCATGTTCCGCCG+TGG | 0.669326 | 1:-25258638 | MsG0180001687.01.T01:CDS |
| GAAAATTCATATCTCCGGCG+AGG | 0.678693 | 1:+25259900 | None:intergenic |
| GCCGGAGGAGGTAGTTACGG+CGG | 0.688861 | 1:-25258463 | MsG0180001687.01.T01:CDS |
| TGAGGAGAAAGCTTCGCCGG+AGG | 0.709522 | 1:-25258478 | MsG0180001687.01.T01:CDS |
| TTGCAGCGGTTACGAGACGG+TGG | 0.718582 | 1:+25259327 | None:intergenic |
| GCCAAAGCAAGTCTCCGATG+CGG | 0.718766 | 1:-25258565 | MsG0180001687.01.T01:CDS |
| CAGCGACGGTGAGTCCAGCG+TGG | 0.734694 | 1:-25258437 | MsG0180001687.01.T01:CDS |
| TTTCGTGGAAAACATGACGA+CGG | 0.759922 | 1:+25259828 | None:intergenic |
| TAATCGCGCTTCCTCCACGG+CGG | 0.770748 | 1:+25258624 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAAAGAGAAAATTT+CGG | - | Chr1:25259766-25259785 | MsG0180001687.01.T01:five_prime_UTR | 10.0% |
| !!! | ATAGTTTTTTATTTTGATTT+TGG | - | Chr1:25258870-25258889 | MsG0180001687.01.T01:intron | 10.0% |
| !! | TTCAAATTCAAATTAAACTT+TGG | + | Chr1:25259994-25260013 | None:intergenic | 15.0% |
| !!! | AATTTTTTTTTTTCTCTTCT+AGG | + | Chr1:25258259-25258278 | None:intergenic | 15.0% |
| !!! | GTTTTCTTACAAAAAAAAAA+AGG | + | Chr1:25258105-25258124 | None:intergenic | 15.0% |
| !!! | TTGAACAAAATTTTATTCTA+TGG | + | Chr1:25259698-25259717 | None:intergenic | 15.0% |
| !! | AATATTGAGAAGAAGATTAA+TGG | - | Chr1:25258442-25258461 | MsG0180001687.01.T01:CDS | 20.0% |
| !! | AATTCAAATTAAACTTTGGA+TGG | + | Chr1:25259990-25260009 | None:intergenic | 20.0% |
| !!! | AAAGGTTTTTTTTTATGTGT+TGG | + | Chr1:25258087-25258106 | None:intergenic | 20.0% |
| !!! | TCGTTTTTTTGTTTTGTTTT+AGG | - | Chr1:25259164-25259183 | MsG0180001687.01.T01:intron | 20.0% |
| ! | AAAGTTATGGTTAGAAGAAA+AGG | + | Chr1:25258231-25258250 | None:intergenic | 25.0% |
| ! | AAGAACAATACAACTAAAGA+TGG | - | Chr1:25258587-25258606 | MsG0180001687.01.T01:CDS | 25.0% |
| ! | ATCCATTTGCAAATCAAAAT+GGG | - | Chr1:25259055-25259074 | MsG0180001687.01.T01:CDS | 25.0% |
| ! | TAAAGAGAAAATTTCGGATA+AGG | - | Chr1:25259772-25259791 | MsG0180001687.01.T01:five_prime_UTR | 25.0% |
| ! | TCCTTGTAAACAAAAAAACA+AGG | + | Chr1:25259840-25259859 | None:intergenic | 25.0% |
| ! | TCTTTAGTTGTATTGTTCTT+CGG | + | Chr1:25258587-25258606 | None:intergenic | 25.0% |
| !!! | AGCAACTTTTTCTTTTCTTT+TGG | - | Chr1:25259875-25259894 | MsG0180001687.01.T01:five_prime_UTR | 25.0% |
| !!! | TATTGATATCGATTTTCGAT+CGG | - | Chr1:25259232-25259251 | MsG0180001687.01.T01:intron | 25.0% |
| !!! | TCCTTGTTTTTTTGTTTACA+AGG | - | Chr1:25259836-25259855 | MsG0180001687.01.T01:five_prime_UTR | 25.0% |
| !!! | TCTTTTTTCTTTTTTGATCG+TGG | - | Chr1:25259729-25259748 | MsG0180001687.01.T01:five_prime_UTR | 25.0% |
| !!! | TTTCTTTTCTTTTGGCTTTT+TGG | - | Chr1:25259883-25259902 | MsG0180001687.01.T01:five_prime_UTR | 25.0% |
| AACAATACAACTAAAGATGG+TGG | - | Chr1:25258590-25258609 | MsG0180001687.01.T01:CDS | 30.0% | |
| CATCCATTTGCAAATCAAAA+TGG | - | Chr1:25259054-25259073 | MsG0180001687.01.T01:CDS | 30.0% | |
| GAAGATGATTTCGATTTCAA+CGG | - | Chr1:25258752-25258771 | MsG0180001687.01.T01:CDS | 30.0% | |
| TTAGAGAATTAATTACCAGC+AGG | + | Chr1:25259098-25259117 | None:intergenic | 30.0% | |
| TTCTCTGAATCTATGTCAAT+TGG | + | Chr1:25258485-25258504 | None:intergenic | 30.0% | |
| ! | TTTTTCGTACAAGAGAGTTT+TGG | + | Chr1:25258049-25258068 | None:intergenic | 30.0% |
| AAAACAAATTCATGTCCTGC+TGG | - | Chr1:25259080-25259099 | MsG0180001687.01.T01:CDS | 35.0% | |
| AAGAAAACAAAAAACCTCGC+CGG | - | Chr1:25258117-25258136 | MsG0180001687.01.T01:three_prime_UTR | 35.0% | |
| AAGCAGAGTTTGAAGAAGAA+AGG | - | Chr1:25259374-25259393 | MsG0180001687.01.T01:CDS | 35.0% | |
| CTGAATCTATGTCAATTGGT+TGG | + | Chr1:25258481-25258500 | None:intergenic | 35.0% | |
| CTTAACTGAGTCAGTTGAAT+CGG | + | Chr1:25258798-25258817 | None:intergenic | 35.0% | |
| CTTCTAGGCTAAGAAAGTTA+TGG | + | Chr1:25258244-25258263 | None:intergenic | 35.0% | |
| GAAAATGGTTCAGAGTTTCA+TGG | - | Chr1:25258655-25258674 | MsG0180001687.01.T01:CDS | 35.0% | |
| GAAATCGAAATCATCTTCGT+CGG | + | Chr1:25258750-25258769 | None:intergenic | 35.0% | |
| GTTGTATTGTTCTTCGGAAA+AGG | + | Chr1:25258581-25258600 | None:intergenic | 35.0% | |
| TCAATTCATTGATGCGATTG+TGG | - | Chr1:25259193-25259212 | MsG0180001687.01.T01:intron | 35.0% | |
| TCAATTGGTTGGATCTTCAA+CGG | + | Chr1:25258470-25258489 | None:intergenic | 35.0% | |
| TGATTAAGATCGTTGCTGAA+AGG | - | Chr1:25259009-25259028 | MsG0180001687.01.T01:CDS | 35.0% | |
| TTAGAAGAAAAGGAGTTTCG+TGG | + | Chr1:25258221-25258240 | None:intergenic | 35.0% | |
| ! | AATACAACTAAAGATGGTGG+TGG | - | Chr1:25258593-25258612 | MsG0180001687.01.T01:CDS | 35.0% |
| ! | AGACGAGCATTGTTAATTTC+CGG | + | Chr1:25258174-25258193 | None:intergenic | 35.0% |
| ! | CTTTTGCCGACGAAAATATA+CGG | + | Chr1:25259311-25259330 | None:intergenic | 35.0% |
| ! | GTATATTTTCGTCGGCAAAA+GGG | - | Chr1:25259310-25259329 | MsG0180001687.01.T01:CDS | 35.0% |
| ! | TTTTTGGACACAGTGTAAGA+AGG | - | Chr1:25259899-25259918 | MsG0180001687.01.T01:five_prime_UTR | 35.0% |
| !! | CTTGTGTAAGTGTTGAAGAA+CGG | - | Chr1:25258919-25258938 | MsG0180001687.01.T01:intron | 35.0% |
| !!! | CTCCCATTTTGATTTGCAAA+TGG | + | Chr1:25259060-25259079 | None:intergenic | 35.0% |
| !!! | GTACAAGAGAGTTTTGGATT+AGG | + | Chr1:25258043-25258062 | None:intergenic | 35.0% |
| AGATTCAGAGAAAGCCACTA+CGG | - | Chr1:25258493-25258512 | MsG0180001687.01.T01:CDS | 40.0% | |
| ATTCCTCTTTCTCCACTCTT+CGG | + | Chr1:25259638-25259657 | None:intergenic | 40.0% | |
| ATTTCGAATCAGTTCCGTAG+TGG | + | Chr1:25258510-25258529 | None:intergenic | 40.0% | |
| CGTTCTTCAACACTTACACA+AGG | + | Chr1:25258921-25258940 | None:intergenic | 40.0% | |
| GAAATGAACCAGTTTCGAAG+TGG | - | Chr1:25258525-25258544 | MsG0180001687.01.T01:CDS | 40.0% | |
| GGATAGTGATTCTGGTGAAT+TGG | - | Chr1:25259517-25259536 | MsG0180001687.01.T01:CDS | 40.0% | |
| TTCATTGATGCGATTGTGGA+AGG | - | Chr1:25259197-25259216 | MsG0180001687.01.T01:intron | 40.0% | |
| TTTCGTGGAAAACATGACGA+CGG | + | Chr1:25258206-25258225 | None:intergenic | 40.0% | |
| ! | CGATTCAACTGACTCAGTTA+AGG | - | Chr1:25258796-25258815 | MsG0180001687.01.T01:CDS | 40.0% |
| ! | CGTATATTTTCGTCGGCAAA+AGG | - | Chr1:25259309-25259328 | MsG0180001687.01.T01:CDS | 40.0% |
| ! | TCGCTTCCGTATATTTTCGT+CGG | - | Chr1:25259302-25259321 | MsG0180001687.01.T01:CDS | 40.0% |
| !! | GGTGAATTGGAGCTGATTTT+TGG | - | Chr1:25259530-25259549 | MsG0180001687.01.T01:CDS | 40.0% |
| !! | TGGATTAGCTTCTTTGCTGA+AGG | - | Chr1:25259667-25259686 | MsG0180001687.01.T01:five_prime_UTR | 40.0% |
| !!! | ATTGGAGCTGATTTTTGGTG+AGG | - | Chr1:25259535-25259554 | MsG0180001687.01.T01:CDS | 40.0% |
| AAACCGAAGAGTGGAGAAAG+AGG | - | Chr1:25259632-25259651 | MsG0180001687.01.T01:five_prime_UTR | 45.0% | |
| ATGAACCAGTTTCGAAGTGG+AGG | - | Chr1:25258528-25258547 | MsG0180001687.01.T01:CDS | 45.0% | |
| CGCCGGAAAATTCATATCTC+CGG | + | Chr1:25258139-25258158 | None:intergenic | 45.0% | |
| CTCTGTTTGCTTGGCGAAAA+TGG | - | Chr1:25258640-25258659 | MsG0180001687.01.T01:CDS | 45.0% | |
| GAAAACATGACGACGGTGAT+CGG | + | Chr1:25258199-25258218 | None:intergenic | 45.0% | |
| GAAAATTCATATCTCCGGCG+AGG | + | Chr1:25258134-25258153 | None:intergenic | 45.0% | |
| GAAAGAGGAATGAAGGTGAC+TGG | - | Chr1:25259647-25259666 | MsG0180001687.01.T01:five_prime_UTR | 45.0% | |
| GAGTGGAGAAAGAGGAATGA+AGG | - | Chr1:25259640-25259659 | MsG0180001687.01.T01:five_prime_UTR | 45.0% | |
| GCGATTACATGTTAGCGAAG+TGG | - | Chr1:25259423-25259442 | MsG0180001687.01.T01:CDS | 45.0% | |
| GCTGAAAGGCTTCAATCTCT+TGG | - | Chr1:25259023-25259042 | MsG0180001687.01.T01:CDS | 45.0% | |
| GGAAACAGTTTCATCGGAGA+TGG | - | Chr1:25259496-25259515 | MsG0180001687.01.T01:CDS | 45.0% | |
| TCCGGCGATATTTACTTCAC+CGG | - | Chr1:25258152-25258171 | MsG0180001687.01.T01:three_prime_UTR | 45.0% | |
| TCCGGTGAAGTAAATATCGC+CGG | + | Chr1:25258156-25258175 | None:intergenic | 45.0% | |
| TCGGAGATGGATAGTGATTC+TGG | - | Chr1:25259509-25259528 | MsG0180001687.01.T01:CDS | 45.0% | |
| TTCAACCTCCACTTCGAAAC+TGG | + | Chr1:25258536-25258555 | None:intergenic | 45.0% | |
| TTTCGAAGTGGAGGTTGAAG+AGG | - | Chr1:25258537-25258556 | MsG0180001687.01.T01:CDS | 45.0% | |
| ! | CGCCGGAGATATGAATTTTC+CGG | - | Chr1:25258134-25258153 | MsG0180001687.01.T01:three_prime_UTR | 45.0% |
| ! | TAGCGTTGAAACAGTTGCAG+CGG | + | Chr1:25258721-25258740 | None:intergenic | 45.0% |
| ! | TTTTCGTCGGCAAAAGGGAA+CGG | - | Chr1:25259315-25259334 | MsG0180001687.01.T01:CDS | 45.0% |
| !! | ACAACTAAAGATGGTGGTGG+TGG | - | Chr1:25258596-25258615 | MsG0180001687.01.T01:CDS | 45.0% |
| !!! | TTTTATTTTTGAAATATTTT+TGG | - | Chr1:25259805-25259824 | MsG0180001687.01.T01:five_prime_UTR | 5.0% |
| ATGTAATCGCGCTTCCTCCA+CGG | + | Chr1:25259413-25259432 | None:intergenic | 50.0% | |
| GGAACCAAGCTCTGTTTGCT+TGG | - | Chr1:25258631-25258650 | MsG0180001687.01.T01:CDS | 50.0% | |
| GGCGGTGGAAACAGTTTCAT+CGG | - | Chr1:25259490-25259509 | MsG0180001687.01.T01:CDS | 50.0% | |
| TTCGCCAAGCAAACAGAGCT+TGG | + | Chr1:25258638-25258657 | None:intergenic | 50.0% | |
| AAAGCAAGTCTCCGATGCGG+CGG | - | Chr1:25259469-25259488 | MsG0180001687.01.T01:CDS | 55.0% | |
| AAGGAATGCATGTTCCGCCG+TGG | - | Chr1:25259393-25259412 | MsG0180001687.01.T01:CDS | 55.0% | |
| AGCGAAGTGGATCTCTCCGT+CGG | - | Chr1:25259436-25259455 | MsG0180001687.01.T01:CDS | 55.0% | |
| CAGTTGCAGCGGTTACGAGA+CGG | + | Chr1:25258710-25258729 | None:intergenic | 55.0% | |
| CGAGACGGTGGTTGAAGTTG+CGG | + | Chr1:25258695-25258714 | None:intergenic | 55.0% | |
| GCCAAAGCAAGTCTCCGATG+CGG | - | Chr1:25259466-25259485 | MsG0180001687.01.T01:CDS | 55.0% | |
| GGTGGTTGAAGTTGCGGTTG+CGG | + | Chr1:25258689-25258708 | None:intergenic | 55.0% | |
| TGGTGAGGAGAAAGCTTCGC+CGG | - | Chr1:25259550-25259569 | MsG0180001687.01.T01:CDS | 55.0% | |
| TTCGCCGGAGGAGGTAGTTA+CGG | - | Chr1:25259565-25259584 | MsG0180001687.01.T01:CDS | 55.0% | |
| !! | TGGTGGTGGAGTTGCTGAGT+TGG | - | Chr1:25258610-25258629 | MsG0180001687.01.T01:CDS | 55.0% |
| CCACTCTTCGGTTTCACCGC+CGG | + | Chr1:25259626-25259645 | None:intergenic | 60.0% | |
| GAATGCATGTTCCGCCGTGG+AGG | - | Chr1:25259396-25259415 | MsG0180001687.01.T01:CDS | 60.0% | |
| GAGTCCAGCGTGGCAGTTAC+CGG | - | Chr1:25259604-25259623 | MsG0180001687.01.T01:five_prime_UTR | 60.0% | |
| GCAGATCGTCACCGTCGTGT+CGG | - | Chr1:25259343-25259362 | MsG0180001687.01.T01:CDS | 60.0% | |
| TAATCGCGCTTCCTCCACGG+CGG | + | Chr1:25259410-25259429 | None:intergenic | 60.0% | |
| TGAGGAGAAAGCTTCGCCGG+AGG | - | Chr1:25259553-25259572 | MsG0180001687.01.T01:CDS | 60.0% | |
| TGCTTTGGCCTAGCTGCCGA+CGG | + | Chr1:25259455-25259474 | None:intergenic | 60.0% | |
| TTGCAGCGGTTACGAGACGG+TGG | + | Chr1:25258707-25258726 | None:intergenic | 60.0% | |
| ! | GCCGCATCGGAGACTTGCTT+TGG | + | Chr1:25259470-25259489 | None:intergenic | 60.0% |
| AGTTACGGCGGCGACAGCGA+CGG | - | Chr1:25259580-25259599 | MsG0180001687.01.T01:exon | 65.0% | |
| CCGGCGGTGAAACCGAAGAG+TGG | - | Chr1:25259623-25259642 | MsG0180001687.01.T01:five_prime_UTR | 65.0% | |
| GATCGTCACCGTCGTGTCGG+AGG | - | Chr1:25259346-25259365 | MsG0180001687.01.T01:CDS | 65.0% | |
| GCCGCCGTAACTACCTCCTC+CGG | + | Chr1:25259572-25259591 | None:intergenic | 65.0% | |
| GCCGGAGGAGGTAGTTACGG+CGG | - | Chr1:25259568-25259587 | MsG0180001687.01.T01:CDS | 65.0% | |
| GGAGAAAGCTTCGCCGGAGG+AGG | - | Chr1:25259556-25259575 | MsG0180001687.01.T01:CDS | 65.0% | |
| GGATCTCTCCGTCGGCAGCT+AGG | - | Chr1:25259444-25259463 | MsG0180001687.01.T01:CDS | 65.0% | |
| TCCAGCGTGGCAGTTACCGG+CGG | - | Chr1:25259607-25259626 | MsG0180001687.01.T01:five_prime_UTR | 65.0% | |
| TGTTTCCACCGCCGCCGCAT+CGG | + | Chr1:25259483-25259502 | None:intergenic | 65.0% | |
| ACCGCCGGTAACTGCCACGC+TGG | + | Chr1:25259611-25259630 | None:intergenic | 70.0% | |
| CAGCGACGGTGAGTCCAGCG+TGG | - | Chr1:25259594-25259613 | MsG0180001687.01.T01:five_prime_UTR | 70.0% | |
| CGTCACCGTCGTGTCGGAGG+CGG | - | Chr1:25259349-25259368 | MsG0180001687.01.T01:CDS | 70.0% | |
| CTTCGCCGCCTCCGACACGA+CGG | + | Chr1:25259357-25259376 | None:intergenic | 70.0% | |
| GCAAGTCTCCGATGCGGCGG+CGG | - | Chr1:25259472-25259491 | MsG0180001687.01.T01:CDS | 70.0% | |
| AGTCTCCGATGCGGCGGCGG+TGG | - | Chr1:25259475-25259494 | MsG0180001687.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 25258039 | 25260014 | 25258039 | ID=MsG0180001687.01;Name=MsG0180001687.01 |
| Chr1 | mRNA | 25258039 | 25260014 | 25258039 | ID=MsG0180001687.01.T01;Parent=MsG0180001687.01;Name=MsG0180001687.01.T01;_AED=0.49;_eAED=0.49;_QI=422|1|1|1|1|1|3|314|354 |
| Chr1 | exon | 25258039 | 25258867 | 25258039 | ID=MsG0180001687.01.T01:exon:18392;Parent=MsG0180001687.01.T01 |
| Chr1 | exon | 25258952 | 25259144 | 25258952 | ID=MsG0180001687.01.T01:exon:18391;Parent=MsG0180001687.01.T01 |
| Chr1 | exon | 25259236 | 25260014 | 25259236 | ID=MsG0180001687.01.T01:exon:18390;Parent=MsG0180001687.01.T01 |
| Chr1 | five_prime_UTR | 25259593 | 25260014 | 25259593 | ID=MsG0180001687.01.T01:five_prime_utr;Parent=MsG0180001687.01.T01 |
| Chr1 | CDS | 25259236 | 25259592 | 25259236 | ID=MsG0180001687.01.T01:cds;Parent=MsG0180001687.01.T01 |
| Chr1 | CDS | 25258952 | 25259144 | 25258952 | ID=MsG0180001687.01.T01:cds;Parent=MsG0180001687.01.T01 |
| Chr1 | CDS | 25258353 | 25258867 | 25258353 | ID=MsG0180001687.01.T01:cds;Parent=MsG0180001687.01.T01 |
| Chr1 | three_prime_UTR | 25258039 | 25258352 | 25258039 | ID=MsG0180001687.01.T01:three_prime_utr;Parent=MsG0180001687.01.T01 |
| Gene Sequence |
| Protein sequence |
