AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280007153.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280007153.01.T01 MTR_2g021540 89.247 93 10 0 325 417 50 142 1.40e-41 144
MsG0280007153.01.T01 MTR_2g020500 48.966 145 71 3 1 144 12 154 1.96e-34 128
MsG0280007153.01.T01 MTR_2g020500 50.926 108 43 4 198 295 13 120 1.16e-25 104
MsG0280007153.01.T01 MTR_2g021480 68.182 88 26 2 1 87 12 98 3.96e-31 120
MsG0280007153.01.T01 MTR_2g021480 43.981 216 95 5 196 405 11 206 1.75e-21 94.0
MsG0280007153.01.T01 MTR_2g021600 43.548 186 99 3 2 186 3 183 2.15e-29 115
MsG0280007153.01.T01 MTR_2g021600 40.708 226 76 9 196 410 1 179 6.10e-24 100
MsG0280007153.01.T01 MTR_2g021560 61.538 91 33 2 1 90 1 90 6.44e-29 114
MsG0280007153.01.T01 MTR_2g021510 34.234 222 86 5 199 417 13 177 1.43e-26 105
MsG0280007153.01.T01 MTR_2g021510 61.538 78 29 1 1 78 11 87 4.61e-23 95.9
MsG0280007153.01.T01 MTR_2g021630 41.250 160 74 3 1 160 1 140 1.16e-23 97.1
MsG0280007153.01.T01 MTR_2g021630 40.179 224 70 7 198 417 2 165 6.60e-20 86.7
MsG0280007153.01.T01 MTR_2g021590 58.974 78 31 1 1 78 5 81 2.99e-22 95.1
MsG0280007153.01.T01 MTR_2g021590 35.193 233 126 6 195 409 3 228 9.53e-15 73.9
MsG0280007153.01.T01 MTR_2g021660 55.172 87 31 2 1 87 2 80 5.39e-22 92.8
MsG0280007153.01.T01 MTR_3g087310 57.143 77 32 1 1 77 1 76 2.36e-20 85.1
MsG0280007153.01.T01 MTR_3g087310 55.263 76 31 2 198 270 2 77 5.24e-17 75.9
MsG0280007153.01.T01 MTR_2g021530 54.054 74 33 1 6 79 2 74 2.60e-20 86.3
MsG0280007153.01.T01 MTR_2g021530 51.351 74 33 2 202 272 2 75 2.70e-15 72.4
MsG0280007153.01.T01 MTR_2g021450 52.703 74 34 1 1 74 1 73 1.64e-19 85.1
MsG0280007153.01.T01 MTR_2g021450 55.172 58 24 1 198 253 2 59 1.31e-12 65.5
MsG0280007153.01.T01 MTR_5g048270 54.217 83 37 1 6 88 2 83 3.20e-19 87.0
MsG0280007153.01.T01 MTR_5g048270 32.245 245 121 7 202 415 2 232 1.20e-14 73.6
MsG0280007153.01.T01 MTR_1g048260 49.074 108 49 3 1 107 1 103 4.56e-19 85.9
MsG0280007153.01.T01 MTR_1g048260 38.000 200 113 5 202 398 2 193 5.12e-18 82.8
MsG0280007153.01.T01 MTR_2g021640 52.273 88 40 2 1 87 31 117 5.26e-19 85.1
MsG0280007153.01.T01 MTR_2g021640 35.319 235 81 7 190 416 24 195 9.84e-11 61.2
MsG0280007153.01.T01 MTR_1g025810 46.296 108 46 3 1 108 1 96 1.06e-18 85.5
MsG0280007153.01.T01 MTR_1g025810 35.081 248 116 8 202 409 2 244 9.72e-15 73.9
MsG0280007153.01.T01 MTR_0485s0020 51.899 79 37 1 1 79 1 78 2.01e-18 83.2
MsG0280007153.01.T01 MTR_0485s0020 34.419 215 102 5 201 412 5 183 4.44e-16 76.6
MsG0280007153.01.T01 MTR_1g025830 48.544 103 41 3 1 103 1 91 6.72e-18 82.4
MsG0280007153.01.T01 MTR_1g025830 34.286 245 101 9 202 409 2 223 1.97e-15 75.5
MsG0280007153.01.T01 MTR_2g021570 57.812 64 26 1 6 69 28 90 1.67e-16 75.1
MsG0280007153.01.T01 MTR_2g021570 54.386 57 23 2 207 260 33 89 3.85e-13 65.5
MsG0280007153.01.T01 MTR_2g022750 51.724 58 28 0 8 65 11 68 1.30e-11 63.9
MsG0280007153.01.T01 MTR_2g022750 51.724 58 28 0 8 65 11 68 1.72e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 93 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTAAGGCAGATCAAATTT+TGG 0.261207 2:-11214925 MsG0280007153.01.T01:CDS
TCGGTTTCTGAAAGGGAAAT+TGG 0.276146 2:-11214895 MsG0280007153.01.T01:CDS
ATCATCTTTGGGTGTTTGTT+AGG 0.284096 2:-11220115 MsG0280007153.01.T01:intron
TGATGATCGAAATCCTTTCT+AGG 0.285322 2:-11220595 MsG0280007153.01.T01:CDS
CCGCCGTCATCGCCGTAGTT+AGG 0.286953 2:+11215447 None:intergenic
TTTATCTCAAATGCACATTC+TGG 0.290745 2:-11214859 MsG0280007153.01.T01:CDS
TAGCGCAGTTGGATCATCTT+TGG 0.291296 2:-11220127 MsG0280007153.01.T01:CDS
GGAAATTCGGTTACTCAAAA+AGG 0.315738 2:-11220216 MsG0280007153.01.T01:CDS
TCTTCTTCTGGTGGCACCAT+AGG 0.336899 2:+11220395 None:intergenic
AATAGAAGCTCAGCTAATTC+AGG 0.355809 2:-11220165 MsG0280007153.01.T01:CDS
GAGTATTATCAATTCTATAA+AGG 0.360878 2:+11215369 None:intergenic
ACTTGCAAACGCACCTCAAT+TGG 0.385293 2:+11220552 None:intergenic
CCTTTCTATATGCAAAGGTC+TGG 0.400815 2:-11215256 MsG0280007153.01.T01:CDS
AGCGCAGTTGGATCATCTTT+GGG 0.403947 2:-11220126 MsG0280007153.01.T01:CDS
AGAATCTGTTGGTGGAAATT+CGG 0.404999 2:-11220229 MsG0280007153.01.T01:CDS
ATTTCGATCAACAGCTCCTC+CGG 0.414271 2:+11215392 None:intergenic
CGCCGTCATCGCCGTAGTTA+GGG 0.423183 2:+11215448 None:intergenic
CTTCTTCTGGTGGCACCATA+GGG 0.424089 2:+11220396 None:intergenic
AGAAGAGGAAGAAGAGGAGA+AGG 0.428370 2:-11215036 MsG0280007153.01.T01:CDS
AGAGGAAGAAGAGGAAGAAG+AGG 0.429220 2:-11215042 MsG0280007153.01.T01:CDS
GAATGGTTCTTCACGAATTG+AGG 0.442274 2:+11220506 None:intergenic
CCAGACCTTTGCATATAGAA+AGG 0.444740 2:+11215256 None:intergenic
GATGAATTTAATTGCTCGGT+TGG 0.451704 2:-11220252 MsG0280007153.01.T01:CDS
AGAGGAAGAAGAGGAGAAGG+AGG 0.456985 2:-11215033 MsG0280007153.01.T01:CDS
GTGTCTCAAAAGCTTTCTGC+AGG 0.459684 2:-11214823 MsG0280007153.01.T01:CDS
TGTTCAAATCAACCCTAGAA+AGG 0.462929 2:+11220582 None:intergenic
CATCAACTCCTCCGGTAGTA+CGG 0.464390 2:+11220613 None:intergenic
GAAGATACTTCTGCTGAGAA+AGG 0.465445 2:-11220293 MsG0280007153.01.T01:CDS
CGGTGAAATATCTGCGAGAA+TGG 0.466719 2:+11220489 None:intergenic
CACGATAAGAATCGAATCAC+TGG 0.470313 2:-11215477 MsG0280007153.01.T01:intron
ATATAGAACATAGATGTATT+CGG 0.471566 2:+11220469 None:intergenic
AGCGGAGGAGGTAGCGCAGT+TGG 0.471953 2:-11220138 MsG0280007153.01.T01:CDS
GATGATCGAAATCCTTTCTA+GGG 0.480009 2:-11220594 MsG0280007153.01.T01:CDS
GAAGATGATGATGATGAAGA+AGG 0.480860 2:-11215176 MsG0280007153.01.T01:CDS
ATACGAAGGGCAGGGAACAC+TGG 0.482179 2:-11220448 MsG0280007153.01.T01:CDS
TTGTTGATCATGAATTCGTT+AGG 0.483387 2:-11215307 MsG0280007153.01.T01:CDS
AGAGAGACAATTGATGATGA+TGG 0.486004 2:-11214952 MsG0280007153.01.T01:CDS
AGCGCTGATGGCGGAAGCCA+CGG 0.486357 2:-11220651 None:intergenic
TGAACAATCCTCTCCAATTG+AGG 0.486752 2:-11220565 MsG0280007153.01.T01:CDS
ATGTTCTATATACGAAGGGC+AGG 0.489244 2:-11220457 MsG0280007153.01.T01:CDS
CTTTCTATATGCAAAGGTCT+GGG 0.495400 2:-11215255 MsG0280007153.01.T01:CDS
TGGATGTTCGGTTTCTGAAA+GGG 0.496222 2:-11214902 MsG0280007153.01.T01:CDS
AGAAGATGATGATGAAGAAG+AGG 0.498596 2:-11215060 MsG0280007153.01.T01:CDS
AATTCAGGAGGAAGCGGAGG+AGG 0.502131 2:-11220150 MsG0280007153.01.T01:CDS
TTGATAATACTCTGCAATTG+AGG 0.502997 2:-11215358 MsG0280007153.01.T01:CDS
CAGACCTTTGCATATAGAAA+GGG 0.503695 2:+11215257 None:intergenic
GATGATGATGAAGAAGGAGG+AGG 0.509827 2:-11215170 MsG0280007153.01.T01:CDS
GTCACCGAGCACCGTACTAC+CGG 0.515286 2:-11220624 MsG0280007153.01.T01:CDS
GGCGATGACGGCGGAAGAGA+CGG 0.517218 2:-11215438 MsG0280007153.01.T01:CDS
TGATGAAGAAGAGGAAGAAG+AGG 0.519145 2:-11215051 MsG0280007153.01.T01:CDS
GGTTGATGAATTTAATTGCT+CGG 0.519319 2:-11220256 MsG0280007153.01.T01:CDS
TGAGGTGCGTTTGCAAGTTG+TGG 0.522625 2:-11215340 MsG0280007153.01.T01:CDS
TGAGGTGCGTTTGCAAGTTG+TGG 0.522625 2:-11220547 MsG0280007153.01.T01:CDS
GAAGCTCTTATCGAGATTCA+CGG 0.527926 2:-11215285 MsG0280007153.01.T01:CDS
GTGGATGTTCGGTTTCTGAA+AGG 0.533998 2:-11214903 MsG0280007153.01.T01:CDS
GATGATGATGATGAAGAAGG+AGG 0.534833 2:-11215173 MsG0280007153.01.T01:CDS
AAGATACTTCTGCTGAGAAA+GGG 0.538013 2:-11220292 MsG0280007153.01.T01:CDS
TTTCGATCAACAGCTCCTCC+GGG 0.539714 2:+11215393 None:intergenic
GACGGCGGAGTCACCGATCT+CGG 0.540182 2:-11215420 MsG0280007153.01.T01:CDS
GTCACCGATCTCGGTAGTCC+CGG 0.540650 2:-11215411 MsG0280007153.01.T01:CDS
AGCTTAGCCAACTCGTTCAT+CGG 0.543217 2:+11214999 None:intergenic
AGACAATAATCAATACTAAG+AGG 0.543627 2:+11214773 None:intergenic
ATTTCGATCATCAACTCCTC+CGG 0.555896 2:+11220605 None:intergenic
AGAAAGGGACGTGGAAACAT+TGG 0.556711 2:-11220277 MsG0280007153.01.T01:CDS
TCAGCTAATTCAGGAGGAAG+CGG 0.557411 2:-11220156 MsG0280007153.01.T01:CDS
CTCCCTAACTACGGCGATGA+CGG 0.557499 2:-11215450 MsG0280007153.01.T01:CDS
ACAGATTTCAAAGAACCCTA+TGG 0.557839 2:-11220411 MsG0280007153.01.T01:CDS
GATGATGATGGCAGTTGCTA+AGG 0.561376 2:-11214940 MsG0280007153.01.T01:CDS
TCCTCCGGTAGTACGGTGCT+CGG 0.567644 2:+11220620 None:intergenic
CATTCCCTTTCTATATGCAA+AGG 0.577837 2:-11215261 MsG0280007153.01.T01:CDS
TCCTCCGGGACTACCGAGAT+CGG 0.585220 2:+11215407 None:intergenic
ATCTCAAATGCACATTCTGG+AGG 0.586032 2:-11214856 MsG0280007153.01.T01:CDS
TGCTCGGTTGGAGAATCTGT+TGG 0.588503 2:-11220240 MsG0280007153.01.T01:CDS
ATCTATGTTCTATATACGAA+GGG 0.609818 2:-11220461 MsG0280007153.01.T01:CDS
CATCTATGTTCTATATACGA+AGG 0.611912 2:-11220462 MsG0280007153.01.T01:CDS
GGTTCTTTGAAATCTGTGAA+CGG 0.618851 2:+11220417 None:intergenic
CTTCTGCTGAGAAAGGGACG+TGG 0.624448 2:-11220286 MsG0280007153.01.T01:CDS
ACAATTGCCGATGAACGAGT+TGG 0.627265 2:-11215006 MsG0280007153.01.T01:CDS
ACTGGGAGGCTCCCTAACTA+CGG 0.630676 2:-11215459 MsG0280007153.01.T01:CDS
CAAACGCACCTCAATTGGAG+AGG 0.630804 2:+11220557 None:intergenic
AGAAGCTCAGCTAATTCAGG+AGG 0.632990 2:-11220162 MsG0280007153.01.T01:CDS
GATGACGATGATGATGAAGA+TGG 0.633409 2:-11215089 MsG0280007153.01.T01:CDS
GCTAATTCAGGAGGAAGCGG+AGG 0.638568 2:-11220153 MsG0280007153.01.T01:CDS
CCTAACTACGGCGATGACGG+CGG 0.641047 2:-11215447 MsG0280007153.01.T01:CDS
ACGATAAGAATCGAATCACT+GGG 0.643518 2:-11215476 MsG0280007153.01.T01:intron
TCGGTTGGAGAATCTGTTGG+TGG 0.653532 2:-11220237 MsG0280007153.01.T01:CDS
TGTTCTATATACGAAGGGCA+GGG 0.661398 2:-11220456 MsG0280007153.01.T01:CDS
ACCGATCTCGGTAGTCCCGG+AGG 0.677550 2:-11215408 MsG0280007153.01.T01:CDS
GATGACGGCGGAAGAGACGG+CGG 0.679894 2:-11215435 MsG0280007153.01.T01:CDS
GGTGCTCGGTGACTCCGCCG+TGG 0.682002 2:+11220634 None:intergenic
ACCGAGCACCGTACTACCGG+AGG 0.706840 2:-11220621 MsG0280007153.01.T01:CDS
GCTGATGGCGGAAGCCACGG+CGG 0.719549 2:-11220648 None:intergenic
ATAAGAATCGAATCACTGGG+AGG 0.742833 2:-11215473 MsG0280007153.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTATTTTTATTTTTTT+TGG + Chr2:11219861-11219880 None:intergenic 0.0%
!! ACAAAAATATATAAATACTT+AGG + Chr2:11219328-11219347 None:intergenic 10.0%
!! CAAAAATATATAAATACTTA+GGG + Chr2:11219327-11219346 None:intergenic 10.0%
!! TGAAAATATTATTATAAACA+TGG - Chr2:11215805-11215824 MsG0280007153.01.T01:intron 10.0%
!! TTTAAATTTGAATCTTAATT+AGG + Chr2:11217945-11217964 None:intergenic 10.0%
!!! TTTATTTTTATTTTTTTTGG+TGG + Chr2:11219858-11219877 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTTTACC+AGG - Chr2:11219552-11219571 MsG0280007153.01.T01:intron 10.0%
!! TTATATGAATTATATGAACA+AGG - Chr2:11219363-11219382 MsG0280007153.01.T01:intron 15.0%
!!! CTAATATGAACTTTTTTTTA+AGG + Chr2:11217131-11217150 None:intergenic 15.0%
!!! CTTTTTTTTTTTGTTATTCA+TGG - Chr2:11219273-11219292 MsG0280007153.01.T01:intron 15.0%
!!! TAAAAAAAAAGTATTAGTTG+AGG - Chr2:11215836-11215855 MsG0280007153.01.T01:intron 15.0%
!!! TTATGATTTTCATTTTTGTT+TGG + Chr2:11216776-11216795 None:intergenic 15.0%
!!! TTTATTTATTTTTTTTGTGG+TGG + Chr2:11219722-11219741 None:intergenic 15.0%
!! AAAATGATTTATTAATCTCC+TGG + Chr2:11219573-11219592 None:intergenic 20.0%
!! AAAATTAAGGGAAAATAAAG+GGG + Chr2:11216031-11216050 None:intergenic 20.0%
!! AAATTGATATTGCTTAGTAA+AGG - Chr2:11218479-11218498 MsG0280007153.01.T01:intron 20.0%
!! AACTAATATCAACTTATTTC+AGG + Chr2:11217160-11217179 None:intergenic 20.0%
!! AATTCAACTTATTTCATGTA+TGG + Chr2:11216992-11217011 None:intergenic 20.0%
!! AATTTACCAAATTTCTAACA+AGG - Chr2:11218020-11218039 MsG0280007153.01.T01:intron 20.0%
!! ACAAAAATGAAAATCATAAC+TGG - Chr2:11216777-11216796 MsG0280007153.01.T01:intron 20.0%
!! ATATAGAACATAGATGTATT+CGG + Chr2:11214966-11214985 None:intergenic 20.0%
!! CAAAAATGAAAATCATAACT+GGG - Chr2:11216778-11216797 MsG0280007153.01.T01:intron 20.0%
!! CGTTAAAATATAGCAAAAAT+TGG + Chr2:11215626-11215645 None:intergenic 20.0%
!! GAAAATTAAGGGAAAATAAA+GGG + Chr2:11216032-11216051 None:intergenic 20.0%
!! GAGTATTATCAATTCTATAA+AGG + Chr2:11220066-11220085 None:intergenic 20.0%
!! TAATAACCTTGTTAGAAATT+TGG + Chr2:11218029-11218048 None:intergenic 20.0%
!! TTAAATCCTTCATAATCATA+AGG - Chr2:11219489-11219508 MsG0280007153.01.T01:intron 20.0%
!! TTAATACCTTATGATTATGA+AGG + Chr2:11219498-11219517 None:intergenic 20.0%
!!! AATCATTTTTTCCTTTTTTG+AGG - Chr2:11219584-11219603 MsG0280007153.01.T01:intron 20.0%
!!! ATCATTTTTTCCTTTTTTGA+GGG - Chr2:11219585-11219604 MsG0280007153.01.T01:intron 20.0%
!!! ATTTTTATTTTTTTTGGTGG+TGG + Chr2:11219855-11219874 None:intergenic 20.0%
!!! GATTCTTATCAATTTTTTCT+TGG + Chr2:11219133-11219152 None:intergenic 20.0%
!!! TACTATTACCATTATGTTTT+TGG - Chr2:11215686-11215705 MsG0280007153.01.T01:intron 20.0%
!!! TCATAATCATAAGGTATTAA+CGG - Chr2:11219498-11219517 MsG0280007153.01.T01:intron 20.0%
!!! TGTTTTTATGTTTTCTTCTT+TGG + Chr2:11217544-11217563 None:intergenic 20.0%
!!! TTAATTTGAATCAACAATGA+AGG + Chr2:11216709-11216728 None:intergenic 20.0%
!!! TTACTTTTTGTATGAATGTT+AGG - Chr2:11215893-11215912 MsG0280007153.01.T01:intron 20.0%
!!! TTATACATTTTTTTAACGCA+AGG - Chr2:11219810-11219829 MsG0280007153.01.T01:intron 20.0%
!!! TTTTGGAATTCAACAATAAT+TGG - Chr2:11218456-11218475 MsG0280007153.01.T01:intron 20.0%
! AAAAATTCCTCTGTGAAATA+TGG - Chr2:11216319-11216338 MsG0280007153.01.T01:intron 25.0%
! AAATAAAAATATGCAAGTCC+AGG - Chr2:11219683-11219702 MsG0280007153.01.T01:intron 25.0%
! AAATTAAGGGAAAATAAAGG+GGG + Chr2:11216030-11216049 None:intergenic 25.0%
! AACTATTCATTTACAACCAT+TGG - Chr2:11216630-11216649 MsG0280007153.01.T01:intron 25.0%
! AATAAAAATATGCAAGTCCA+GGG - Chr2:11219684-11219703 MsG0280007153.01.T01:intron 25.0%
! AATAATGTTCCCTTTCAAAT+AGG + Chr2:11218306-11218325 None:intergenic 25.0%
! ACTTATTTCATGTATGGATT+TGG + Chr2:11216986-11217005 None:intergenic 25.0%
! AGAGATCTTTGTATATATCT+AGG - Chr2:11216385-11216404 MsG0280007153.01.T01:intron 25.0%
! ATAGTAGTTTCTTACTCAAA+TGG - Chr2:11215547-11215566 MsG0280007153.01.T01:intron 25.0%
! ATCTATGTTCTATATACGAA+GGG - Chr2:11214971-11214990 MsG0280007153.01.T01:CDS 25.0%
! ATTTATGAAGAAGAATACCA+AGG - Chr2:11218335-11218354 MsG0280007153.01.T01:intron 25.0%
! ATTTCTCTTGCAAACAATTT+CGG + Chr2:11218137-11218156 None:intergenic 25.0%
! GATTCAGTTGAATAATCATA+TGG + Chr2:11216843-11216862 None:intergenic 25.0%
! GGAAAATTAAGGGAAAATAA+AGG + Chr2:11216033-11216052 None:intergenic 25.0%
! GTTATTTGAATTTGAACAAC+TGG + Chr2:11216608-11216627 None:intergenic 25.0%
! TAGAGTTAATATGCAAATTC+TGG - Chr2:11215366-11215385 MsG0280007153.01.T01:CDS 25.0%
! TGCTGAATAAATTACTAGTT+TGG - Chr2:11216215-11216234 MsG0280007153.01.T01:intron 25.0%
! TTTATGAAGAAGAATACCAA+GGG - Chr2:11218336-11218355 MsG0280007153.01.T01:intron 25.0%
!! ACAATCTCAAATGAAGTTTT+AGG + Chr2:11218650-11218669 None:intergenic 25.0%
!! ACAATTGATGATAAATGAGT+TGG + Chr2:11216927-11216946 None:intergenic 25.0%
!! AGCAAAACAAAGTTCTAATT+TGG + Chr2:11216199-11216218 None:intergenic 25.0%
!! CAATCTCAAATGAAGTTTTA+GGG + Chr2:11218649-11218668 None:intergenic 25.0%
!! CATAATCATAAGGTATTAAC+GGG - Chr2:11219499-11219518 MsG0280007153.01.T01:intron 25.0%
!! CTGAATAAATTACTAGTTTG+GGG - Chr2:11216217-11216236 MsG0280007153.01.T01:intron 25.0%
!! GCAAAACAAAGTTCTAATTT+GGG + Chr2:11216198-11216217 None:intergenic 25.0%
!! GCTGAATAAATTACTAGTTT+GGG - Chr2:11216216-11216235 MsG0280007153.01.T01:intron 25.0%
!! TAATGATTTTCCCTCAAAAA+AGG + Chr2:11219598-11219617 None:intergenic 25.0%
!! TATACAAAGATCTCTTTTCT+TGG + Chr2:11216380-11216399 None:intergenic 25.0%
!! TGTTTGTTAGGTATATCAAA+AGG - Chr2:11215329-11215348 MsG0280007153.01.T01:CDS 25.0%
!! TTCATTAGCATTAGGAATTT+TGG - Chr2:11218621-11218640 MsG0280007153.01.T01:intron 25.0%
!! TTTGAGATTGTTTGTGTTAT+TGG - Chr2:11218659-11218678 MsG0280007153.01.T01:intron 25.0%
!!! AAGTTGATGTATTGAGATAA+TGG + Chr2:11217870-11217889 None:intergenic 25.0%
!!! AGAGTATTTTAGAATACTTC+AGG - Chr2:11216115-11216134 MsG0280007153.01.T01:intron 25.0%
!!! TCAATTTTTTCTTGGTCTAA+TGG + Chr2:11219125-11219144 None:intergenic 25.0%
!!! TTTTGCTAGAGTATCTTATA+TGG + Chr2:11216753-11216772 None:intergenic 25.0%
AAAAAACCTGCTAAATCTGT+CGG - Chr2:11217446-11217465 MsG0280007153.01.T01:intron 30.0%
AACCATTATACTCACTACTT+AGG + Chr2:11216056-11216075 None:intergenic 30.0%
AACCTATCTTCATTAGCATT+AGG - Chr2:11218613-11218632 MsG0280007153.01.T01:intron 30.0%
AACGATACCAATTGTAATCA+AGG - Chr2:11216570-11216589 MsG0280007153.01.T01:intron 30.0%
AAGATGGAGAATTGAAAAGA+TGG + Chr2:11216880-11216899 None:intergenic 30.0%
AATAGATCAATGATTGTGAG+AGG + Chr2:11217045-11217064 None:intergenic 30.0%
AATGAGTTTGTCACCTAAAT+TGG + Chr2:11218245-11218264 None:intergenic 30.0%
ACCATTATACTCACTACTTA+GGG + Chr2:11216055-11216074 None:intergenic 30.0%
ACTACTTAGGGGAAAATTAA+GGG + Chr2:11216043-11216062 None:intergenic 30.0%
AGATTTGTAGGATTGTTTAG+GGG + Chr2:11217514-11217533 None:intergenic 30.0%
AGTAGCAGATTAACTTACTT+TGG - Chr2:11219217-11219236 MsG0280007153.01.T01:intron 30.0%
AGTTAATATGCAAATTCTGG+AGG - Chr2:11215369-11215388 MsG0280007153.01.T01:CDS 30.0%
CAGATTTGTAGGATTGTTTA+GGG + Chr2:11217515-11217534 None:intergenic 30.0%
CATCTATGTTCTATATACGA+AGG - Chr2:11214970-11214989 MsG0280007153.01.T01:CDS 30.0%
CATTAATAATCAAATGCGAG+AGG + Chr2:11215455-11215474 None:intergenic 30.0%
CTCTCGCATTTGATTATTAA+TGG - Chr2:11215453-11215472 MsG0280007153.01.T01:CDS 30.0%
GAATGCCTATTTCATTAGAT+GGG - Chr2:11218681-11218700 MsG0280007153.01.T01:intron 30.0%
GAATTGTTACAGTGTACAAA+TGG - Chr2:11217209-11217228 MsG0280007153.01.T01:intron 30.0%
GGATTCTAACAACATGAAAA+AGG + Chr2:11216965-11216984 None:intergenic 30.0%
GTAGGAATTCAACTAGAATT+AGG + Chr2:11217915-11217934 None:intergenic 30.0%
TAAAGGGGGTTTATTACATA+AGG + Chr2:11216016-11216035 None:intergenic 30.0%
TAACGCATATCATAAGAGTT+TGG + Chr2:11218523-11218542 None:intergenic 30.0%
TAGAGCTATAAAAGTCACTA+AGG - Chr2:11217827-11217846 MsG0280007153.01.T01:intron 30.0%
TATGCTACCTTGATTACAAT+TGG + Chr2:11216580-11216599 None:intergenic 30.0%
TATTCATTTACAACCATTGG+AGG - Chr2:11216633-11216652 MsG0280007153.01.T01:intron 30.0%
TCTACAACCATTCTTACAAA+TGG + Chr2:11218730-11218749 None:intergenic 30.0%
TCTTAATTAGGCTTGAATGT+AGG + Chr2:11217933-11217952 None:intergenic 30.0%
TGTGAAATATAAACCTTCAC+AGG - Chr2:11217241-11217260 MsG0280007153.01.T01:intron 30.0%
TGTTGCAAGTCTTTCTTAAA+TGG - Chr2:11216247-11216266 MsG0280007153.01.T01:intron 30.0%
TGTTTAGCCATTTGTAAGAA+TGG - Chr2:11218720-11218739 MsG0280007153.01.T01:intron 30.0%
TTCCTAATGCTAATGAAGAT+AGG + Chr2:11218618-11218637 None:intergenic 30.0%
TTCTCAAATATTACCATCAC+AGG - Chr2:11217187-11217206 MsG0280007153.01.T01:intron 30.0%
TTGAATCGAATGTAAACAAC+TGG - Chr2:11215574-11215593 MsG0280007153.01.T01:intron 30.0%
TTGTATGAATGTTAGGTTTC+AGG - Chr2:11215900-11215919 MsG0280007153.01.T01:intron 30.0%
TTGTTGATCATGAATTCGTT+AGG - Chr2:11220125-11220144 MsG0280007153.01.T01:CDS 30.0%
TTTATCTCAAATGCACATTC+TGG - Chr2:11220573-11220592 MsG0280007153.01.T01:CDS 30.0%
TTTCTTGGAATTTCACTTTC+TGG + Chr2:11216365-11216384 None:intergenic 30.0%
! GAAAAACATGAAGTTTTTCG+TGG + Chr2:11218828-11218847 None:intergenic 30.0%
! GGTTGAGAAGATTTTTGATA+TGG + Chr2:11217024-11217043 None:intergenic 30.0%
! TATAGCAAAAATTGGTTCTC+CGG + Chr2:11215618-11215637 None:intergenic 30.0%
! TATTCATGGCATGCAAATTT+TGG - Chr2:11219287-11219306 MsG0280007153.01.T01:intron 30.0%
! TCTTCAGCTTTATGTTTATC+CGG + Chr2:11218933-11218952 None:intergenic 30.0%
! TGAGAAGATTTTTGATATGG+AGG + Chr2:11217021-11217040 None:intergenic 30.0%
! TTCACAGAGGAATTTTTACT+TGG + Chr2:11216316-11216335 None:intergenic 30.0%
! TTGATAATACTCTGCAATTG+AGG - Chr2:11220074-11220093 MsG0280007153.01.T01:intron 30.0%
!! ATCAAATTTTGGTGGATGTT+CGG - Chr2:11220518-11220537 MsG0280007153.01.T01:CDS 30.0%
!! GGTTGATGAATTTAATTGCT+CGG - Chr2:11215176-11215195 MsG0280007153.01.T01:CDS 30.0%
!!! ATTTTTTCTTGGTCTAATGG+AGG + Chr2:11219122-11219141 None:intergenic 30.0%
!!! CTGCTTTTTTTTCATGCATT+TGG + Chr2:11217621-11217640 None:intergenic 30.0%
!!! GTTGATCGTTTGGTTTTATT+CGG + Chr2:11216553-11216572 None:intergenic 30.0%
!!! TGTTTCTGTGTTTTGATCAT+AGG + Chr2:11217394-11217413 None:intergenic 30.0%
!!! TTGATCGTTTGGTTTTATTC+GGG + Chr2:11216552-11216571 None:intergenic 30.0%
!!! TTTATTTTTTTTGTGGTGGC+CGG + Chr2:11219718-11219737 None:intergenic 30.0%
AAATATTCCACGCTTCAGAA+TGG + Chr2:11215714-11215733 None:intergenic 35.0%
AAATGTTGCACACAATAAGC+CGG - Chr2:11218911-11218930 MsG0280007153.01.T01:intron 35.0%
AAGATACTTCTGCTGAGAAA+GGG - Chr2:11215140-11215159 MsG0280007153.01.T01:CDS 35.0%
AATAGAAGCTCAGCTAATTC+AGG - Chr2:11215267-11215286 MsG0280007153.01.T01:CDS 35.0%
AATATTCCACGCTTCAGAAT+GGG + Chr2:11215713-11215732 None:intergenic 35.0%
AATTGGTATCGTTGATCGTT+TGG + Chr2:11216563-11216582 None:intergenic 35.0%
ACAGATTTCAAAGAACCCTA+TGG - Chr2:11215021-11215040 MsG0280007153.01.T01:CDS 35.0%
ACGATAAGAATCGAATCACT+GGG - Chr2:11219956-11219975 MsG0280007153.01.T01:intron 35.0%
AGTCTTTCTTAAATGGTCTG+CGG - Chr2:11216254-11216273 MsG0280007153.01.T01:intron 35.0%
ATCATCTTTGGGTGTTTGTT+AGG - Chr2:11215317-11215336 MsG0280007153.01.T01:CDS 35.0%
ATGCCAGATGCAGAAATAAA+AGG - Chr2:11219081-11219100 MsG0280007153.01.T01:intron 35.0%
CAATGCACTACAAACAACTT+GGG + Chr2:11218270-11218289 None:intergenic 35.0%
CACTACTTAGGGGAAAATTA+AGG + Chr2:11216044-11216063 None:intergenic 35.0%
CAGACCTTTGCATATAGAAA+GGG + Chr2:11220178-11220197 None:intergenic 35.0%
CAGGAAACTACTTCTAACAA+AGG - Chr2:11217260-11217279 MsG0280007153.01.T01:intron 35.0%
CATTCCCTTTCTATATGCAA+AGG - Chr2:11220171-11220190 MsG0280007153.01.T01:CDS 35.0%
CCATTATACTCACTACTTAG+GGG + Chr2:11216054-11216073 None:intergenic 35.0%
CTGTTTGTGTTCAGAGATAA+CGG + Chr2:11216664-11216683 None:intergenic 35.0%
CTTATGATATGCGTTATGTC+TGG - Chr2:11218527-11218546 MsG0280007153.01.T01:intron 35.0%
CTTTCTATATGCAAAGGTCT+GGG - Chr2:11220177-11220196 MsG0280007153.01.T01:CDS 35.0%
GAATGGGACCAAAAACATAA+TGG + Chr2:11215697-11215716 None:intergenic 35.0%
GAGAATTGAAAAGATGGATG+AGG + Chr2:11216874-11216893 None:intergenic 35.0%
GATGAATTTAATTGCTCGGT+TGG - Chr2:11215180-11215199 MsG0280007153.01.T01:CDS 35.0%
GATGATCGAAATCCTTTCTA+GGG - Chr2:11214838-11214857 MsG0280007153.01.T01:CDS 35.0%
GCAGATTTGTAGGATTGTTT+AGG + Chr2:11217516-11217535 None:intergenic 35.0%
GGAAATTCGGTTACTCAAAA+AGG - Chr2:11215216-11215235 MsG0280007153.01.T01:CDS 35.0%
GGAATGCCTATTTCATTAGA+TGG - Chr2:11218680-11218699 MsG0280007153.01.T01:intron 35.0%
GGATAAACATAAAGCTGAAG+AGG - Chr2:11218932-11218951 MsG0280007153.01.T01:intron 35.0%
GTTACAGTGTACAAATGGTA+AGG - Chr2:11217214-11217233 MsG0280007153.01.T01:intron 35.0%
TACCTCAGTCCTATTTGAAA+GGG - Chr2:11218294-11218313 MsG0280007153.01.T01:intron 35.0%
TAGACTGCAGTTATTGTCTA+CGG + Chr2:11217644-11217663 None:intergenic 35.0%
TCAATGCACTACAAACAACT+TGG + Chr2:11218271-11218290 None:intergenic 35.0%
TCACTAAGGTAACTTCCTTA+GGG - Chr2:11217841-11217860 MsG0280007153.01.T01:intron 35.0%
TCTAAGAAGATAATGAGCCA+AGG - Chr2:11216289-11216308 MsG0280007153.01.T01:intron 35.0%
TCTAAGTCCATATTTCACAG+AGG + Chr2:11216329-11216348 None:intergenic 35.0%
TCTTCTTCTTCTTCTTCTTG+AGG + Chr2:11220238-11220257 None:intergenic 35.0%
TGAATTCCAAAAGAGAGCTT+AGG + Chr2:11218448-11218467 None:intergenic 35.0%
TGAGGTAGAATTTCAGTCTT+CGG - Chr2:11215854-11215873 MsG0280007153.01.T01:intron 35.0%
TGATGATCGAAATCCTTTCT+AGG - Chr2:11214837-11214856 MsG0280007153.01.T01:CDS 35.0%
TGTTCAAATCAACCCTAGAA+AGG + Chr2:11214853-11214872 None:intergenic 35.0%
TTACCTCAGTCCTATTTGAA+AGG - Chr2:11218293-11218312 MsG0280007153.01.T01:intron 35.0%
TTAGAAGTAGTTTCCTGTGA+AGG + Chr2:11217257-11217276 None:intergenic 35.0%
! ACAGAAATAGTTTGCACAAG+CGG - Chr2:11218196-11218215 MsG0280007153.01.T01:intron 35.0%
! AGAAGATGATGATGAAGAAG+AGG - Chr2:11220372-11220391 MsG0280007153.01.T01:CDS 35.0%
! AGAATCTGTTGGTGGAAATT+CGG - Chr2:11215203-11215222 MsG0280007153.01.T01:CDS 35.0%
! AGGAATTTTTACTTGGTCCT+TGG + Chr2:11216309-11216328 None:intergenic 35.0%
! ATCACAAGTTTGAGATTCCA+TGG + Chr2:11218562-11218581 None:intergenic 35.0%
! CAAACAAGCTTTAGTTCAAG+AGG - Chr2:11219250-11219269 MsG0280007153.01.T01:intron 35.0%
! CAAAGTTCTAATTTGGGAAC+AGG + Chr2:11216192-11216211 None:intergenic 35.0%
! CTGGATAATGTTGATGAAGA+TGG + Chr2:11216896-11216915 None:intergenic 35.0%
! GAAGATGATGATGATGAAGA+AGG - Chr2:11220256-11220275 MsG0280007153.01.T01:CDS 35.0%
! GATGATAAATGAGTTGGCTA+TGG + Chr2:11216921-11216940 None:intergenic 35.0%
! GATTTTTGATATGGAGGTAG+TGG + Chr2:11217015-11217034 None:intergenic 35.0%
! GGTTTCAAATCGCAACTTTT+GGG - Chr2:11219520-11219539 MsG0280007153.01.T01:intron 35.0%
! GTTAGGTTTCAGGTGATTAA+GGG - Chr2:11215910-11215929 MsG0280007153.01.T01:intron 35.0%
! TAAGGCAGATCAAATTTTGG+TGG - Chr2:11220510-11220529 MsG0280007153.01.T01:CDS 35.0%
! TCACAAGTTTGAGATTCCAT+GGG + Chr2:11218561-11218580 None:intergenic 35.0%
! TGAAATCCTAAGCTCTCTTT+TGG - Chr2:11218439-11218458 MsG0280007153.01.T01:intron 35.0%
! TGCTAAGGCAGATCAAATTT+TGG - Chr2:11220507-11220526 MsG0280007153.01.T01:CDS 35.0%
! TGTTAGGTTTCAGGTGATTA+AGG - Chr2:11215909-11215928 MsG0280007153.01.T01:intron 35.0%
! TTAGGTTTCAGGTGATTAAG+GGG - Chr2:11215911-11215930 MsG0280007153.01.T01:intron 35.0%
! TTGAGATAATGGTTTCCCTA+AGG + Chr2:11217859-11217878 None:intergenic 35.0%
! TTTAGAATACTTCAGGCAGT+AGG - Chr2:11216122-11216141 MsG0280007153.01.T01:intron 35.0%
! TTTCATCCAGTTTGAAGCTT+TGG + Chr2:11219022-11219041 None:intergenic 35.0%
!! AGAGAGACAATTGATGATGA+TGG - Chr2:11220480-11220499 MsG0280007153.01.T01:CDS 35.0%
!! GGTTCTTTGAAATCTGTGAA+CGG + Chr2:11215018-11215037 None:intergenic 35.0%
!! TGATCATAGGCTGATTTTAG+TGG + Chr2:11217381-11217400 None:intergenic 35.0%
!! TTTGGTGTTTGCAGATTTGT+AGG + Chr2:11217526-11217545 None:intergenic 35.0%
!!! ATTTTTTTAACGCAAGGTCC+GGG - Chr2:11219816-11219835 MsG0280007153.01.T01:intron 35.0%
!!! CATTTTTTTAACGCAAGGTC+CGG - Chr2:11219815-11219834 MsG0280007153.01.T01:intron 35.0%
!!! GTACCTTTTATTTCTGCATC+TGG + Chr2:11219087-11219106 None:intergenic 35.0%
!!! TTATTTTTTTTGGTGGTGGC+CGG + Chr2:11219851-11219870 None:intergenic 35.0%
AACTGCAGTCTACTTGTTCA+AGG - Chr2:11217652-11217671 MsG0280007153.01.T01:intron 40.0%
AAGAATACCAAGGGAATGGA+AGG - Chr2:11218345-11218364 MsG0280007153.01.T01:intron 40.0%
ATAAGAATCGAATCACTGGG+AGG - Chr2:11219959-11219978 MsG0280007153.01.T01:intron 40.0%
ATCTCAAATGCACATTCTGG+AGG - Chr2:11220576-11220595 MsG0280007153.01.T01:CDS 40.0%
ATGTTCTATATACGAAGGGC+AGG - Chr2:11214975-11214994 MsG0280007153.01.T01:CDS 40.0%
ATTTCGATCATCAACTCCTC+CGG + Chr2:11214830-11214849 None:intergenic 40.0%
CACGATAAGAATCGAATCAC+TGG - Chr2:11219955-11219974 MsG0280007153.01.T01:intron 40.0%
CACTGTAACAATTCCTGTGA+TGG + Chr2:11217203-11217222 None:intergenic 40.0%
CATGCAGGACACTATTGAAT+AGG + Chr2:11215756-11215775 None:intergenic 40.0%
CATGGAAAAGACTACTTTGG+TGG - Chr2:11215772-11215791 MsG0280007153.01.T01:intron 40.0%
CCAGACCTTTGCATATAGAA+AGG + Chr2:11220179-11220198 None:intergenic 40.0%
CCCCTAAGTAGTGAGTATAA+TGG - Chr2:11216051-11216070 MsG0280007153.01.T01:intron 40.0%
CCTTTCTATATGCAAAGGTC+TGG - Chr2:11220176-11220195 MsG0280007153.01.T01:CDS 40.0%
CGCAAAAATTGTCAGACTGT+GGG - Chr2:11218847-11218866 MsG0280007153.01.T01:intron 40.0%
CTATTCAATAGTGTCCTGCA+TGG - Chr2:11215754-11215773 MsG0280007153.01.T01:intron 40.0%
CTCTTGCAAACAATTTCGGT+GGG + Chr2:11218133-11218152 None:intergenic 40.0%
CTGCATGGAAAAGACTACTT+TGG - Chr2:11215769-11215788 MsG0280007153.01.T01:intron 40.0%
GAAAAGATGGATGAGGAATG+AGG + Chr2:11216867-11216886 None:intergenic 40.0%
GAAGAAGAATACCAAGGGAA+TGG - Chr2:11218341-11218360 MsG0280007153.01.T01:intron 40.0%
GAAGATACTTCTGCTGAGAA+AGG - Chr2:11215139-11215158 MsG0280007153.01.T01:CDS 40.0%
GAAGCTCTTATCGAGATTCA+CGG - Chr2:11220147-11220166 MsG0280007153.01.T01:CDS 40.0%
GAAGGGTTCACATTTCATGT+TGG - Chr2:11218796-11218815 MsG0280007153.01.T01:intron 40.0%
GAATGGTTCTTCACGAATTG+AGG + Chr2:11214929-11214948 None:intergenic 40.0%
GACTTCGTCTGAATGAATGA+AGG + Chr2:11218170-11218189 None:intergenic 40.0%
GAGTTTGTCACCTAAATTGG+AGG + Chr2:11218242-11218261 None:intergenic 40.0%
GATGCATAAACAACCTCCAT+GGG - Chr2:11218367-11218386 MsG0280007153.01.T01:intron 40.0%
GCAAAAATTGTCAGACTGTG+GGG - Chr2:11218848-11218867 MsG0280007153.01.T01:intron 40.0%
GTACGCCCATCTAATGAAAT+AGG + Chr2:11218689-11218708 None:intergenic 40.0%
GTCACTAAGGTAACTTCCTT+AGG - Chr2:11217840-11217859 MsG0280007153.01.T01:intron 40.0%
TCGCAAAAATTGTCAGACTG+TGG - Chr2:11218846-11218865 MsG0280007153.01.T01:intron 40.0%
TCTCTTGCAAACAATTTCGG+TGG + Chr2:11218134-11218153 None:intergenic 40.0%
TGAACAATCCTCTCCAATTG+AGG - Chr2:11214867-11214886 MsG0280007153.01.T01:CDS 40.0%
TGATCTTCGTACGTCTAACA+AGG - Chr2:11218578-11218597 MsG0280007153.01.T01:intron 40.0%
TGATGAAGAAGAGGAAGAAG+AGG - Chr2:11220381-11220400 MsG0280007153.01.T01:CDS 40.0%
TGGTACTTCTATTGCAACTC+TGG + Chr2:11217694-11217713 None:intergenic 40.0%
TGTTCTATATACGAAGGGCA+GGG - Chr2:11214976-11214995 MsG0280007153.01.T01:CDS 40.0%
TTCCCTTTCAAATAGGACTG+AGG + Chr2:11218299-11218318 None:intergenic 40.0%
TTCGTCTGAATGAATGAAGG+TGG + Chr2:11218167-11218186 None:intergenic 40.0%
TTCTTAAATGGTCTGCGGAT+TGG - Chr2:11216259-11216278 MsG0280007153.01.T01:intron 40.0%
TTTGTCACCTAAATTGGAGG+CGG + Chr2:11218239-11218258 None:intergenic 40.0%
! CAAAGTAGTCTTTTCCATGC+AGG + Chr2:11215771-11215790 None:intergenic 40.0%
! GATGACGATGATGATGAAGA+TGG - Chr2:11220343-11220362 MsG0280007153.01.T01:CDS 40.0%
! GATGATGATGATGAAGAAGG+AGG - Chr2:11220259-11220278 MsG0280007153.01.T01:CDS 40.0%
! GGGTTTCAAATCGCAACTTT+TGG - Chr2:11219519-11219538 MsG0280007153.01.T01:intron 40.0%
! TCGGTTTCTGAAAGGGAAAT+TGG - Chr2:11220537-11220556 MsG0280007153.01.T01:CDS 40.0%
! TGAGCTTAACTCAGTTGGTA+TGG - Chr2:11219650-11219669 MsG0280007153.01.T01:intron 40.0%
! TGGATGTTCGGTTTCTGAAA+GGG - Chr2:11220530-11220549 MsG0280007153.01.T01:CDS 40.0%
!! GCTTGTGCAAACTATTTCTG+TGG + Chr2:11218197-11218216 None:intergenic 40.0%
!! GGGGGCAACAATGTTTTTAA+GGG + Chr2:11219048-11219067 None:intergenic 40.0%
!! TCGTCGTTGTTTTCTTCTTC+TGG + Chr2:11215052-11215071 None:intergenic 40.0%
!! TCGTTGTTTTCTTCTTCTGG+TGG + Chr2:11215049-11215068 None:intergenic 40.0%
!! TGGGGGCAACAATGTTTTTA+AGG + Chr2:11219049-11219068 None:intergenic 40.0%
!!! TATTTTTTTTGGTGGTGGCC+GGG + Chr2:11219850-11219869 None:intergenic 40.0%
!!! TTTTTTTAACGCAAGGTCCG+GGG - Chr2:11219817-11219836 MsG0280007153.01.T01:intron 40.0%
ACAATTGCCGATGAACGAGT+TGG - Chr2:11220426-11220445 MsG0280007153.01.T01:CDS 45.0%
ACATAAAGCTGAAGAGGCAG+TGG - Chr2:11218938-11218957 MsG0280007153.01.T01:intron 45.0%
ACTGCTGATACACATGCCAA+AGG - Chr2:11217590-11217609 MsG0280007153.01.T01:intron 45.0%
ACTTGCAAACGCACCTCAAT+TGG + Chr2:11214883-11214902 None:intergenic 45.0%
AGAAAGGGACGTGGAAACAT+TGG - Chr2:11215155-11215174 MsG0280007153.01.T01:CDS 45.0%
AGAAGAGGAAGAAGAGGAGA+AGG - Chr2:11220396-11220415 MsG0280007153.01.T01:CDS 45.0%
AGAAGCTCAGCTAATTCAGG+AGG - Chr2:11215270-11215289 MsG0280007153.01.T01:CDS 45.0%
AGAGGAAGAAGAGGAAGAAG+AGG - Chr2:11220390-11220409 MsG0280007153.01.T01:CDS 45.0%
AGCGCAGTTGGATCATCTTT+GGG - Chr2:11215306-11215325 MsG0280007153.01.T01:CDS 45.0%
AGCTTAGCCAACTCGTTCAT+CGG + Chr2:11220436-11220455 None:intergenic 45.0%
ATGCGTTATGTCTGGTCTAC+TGG - Chr2:11218535-11218554 MsG0280007153.01.T01:intron 45.0%
ATTTCGATCAACAGCTCCTC+CGG + Chr2:11220043-11220062 None:intergenic 45.0%
CGGTGAAATATCTGCGAGAA+TGG + Chr2:11214946-11214965 None:intergenic 45.0%
GGATGCATAAACAACCTCCA+TGG - Chr2:11218366-11218385 MsG0280007153.01.T01:intron 45.0%
GTCATGACAAGGCAAGACAT+GGG + Chr2:11217734-11217753 None:intergenic 45.0%
GTCATGCCAAAGCTTCAAAC+TGG - Chr2:11219013-11219032 MsG0280007153.01.T01:intron 45.0%
GTCTGAATGAATGAAGGTGG+AGG + Chr2:11218164-11218183 None:intergenic 45.0%
GTGGATGTTCGGTTTCTGAA+AGG - Chr2:11220529-11220548 MsG0280007153.01.T01:CDS 45.0%
GTGTCTCAAAAGCTTTCTGC+AGG - Chr2:11220609-11220628 MsG0280007153.01.T01:CDS 45.0%
TAGCGCAGTTGGATCATCTT+TGG - Chr2:11215305-11215324 MsG0280007153.01.T01:CDS 45.0%
TATGCATCCTTCCATTCCCT+TGG + Chr2:11218355-11218374 None:intergenic 45.0%
TCAGCTAATTCAGGAGGAAG+CGG - Chr2:11215276-11215295 MsG0280007153.01.T01:CDS 45.0%
! AAATGAGTTGGCTATGGAGC+TGG + Chr2:11216915-11216934 None:intergenic 45.0%
! ATTGCAACTCTGGAGAGTTG+AGG + Chr2:11217684-11217703 None:intergenic 45.0%
! CATGCATTTGGAGCATCCTT+TGG + Chr2:11217609-11217628 None:intergenic 45.0%
! GATAACGGTTCTTCCTCCAA+TGG + Chr2:11216649-11216668 None:intergenic 45.0%
! GATGATGATGAAGAAGGAGG+AGG - Chr2:11220262-11220281 MsG0280007153.01.T01:CDS 45.0%
!! CAACTGGACAGACTTGCTAT+TGG - Chr2:11215590-11215609 MsG0280007153.01.T01:intron 45.0%
!! GACAGACTTGCTATTGGAAC+CGG - Chr2:11215596-11215615 MsG0280007153.01.T01:intron 45.0%
!! GATGATGATGGCAGTTGCTA+AGG - Chr2:11220492-11220511 MsG0280007153.01.T01:CDS 45.0%
!! GCTCGATGTTTCTAGCTTTG+AGG + Chr2:11217762-11217781 None:intergenic 45.0%
!! TAGGATTGTTTAGGGGCATC+AGG + Chr2:11217507-11217526 None:intergenic 45.0%
!! TAGGCTGATTTTAGTGGTGC+TGG + Chr2:11217375-11217394 None:intergenic 45.0%
!!! ATTTTTTTTGGTGGTGGCCG+GGG + Chr2:11219849-11219868 None:intergenic 45.0%
!!! TGGTGCTGGTTTTTGTCGTT+GGG + Chr2:11217361-11217380 None:intergenic 45.0%
!!! TTATTTATTTATTTTTTTTG+TGG + Chr2:11219725-11219744 None:intergenic 5.0%
AGAGGAAGAAGAGGAGAAGG+AGG - Chr2:11220399-11220418 MsG0280007153.01.T01:CDS 50.0%
AGGCAGTAGGTGATTGTGGA+GGG - Chr2:11216135-11216154 MsG0280007153.01.T01:intron 50.0%
ATCCATCTTTGATCCGCCCT+TGG - Chr2:11218096-11218115 MsG0280007153.01.T01:intron 50.0%
CAAACGCACCTCAATTGGAG+AGG + Chr2:11214878-11214897 None:intergenic 50.0%
CATCAACTCCTCCGGTAGTA+CGG + Chr2:11214822-11214841 None:intergenic 50.0%
CATGACTCCGCCTCCAATTT+AGG - Chr2:11218229-11218248 MsG0280007153.01.T01:intron 50.0%
CCAACTGAGTTAAGCTCACG+AGG + Chr2:11219648-11219667 None:intergenic 50.0%
CCTCGTGAGCTTAACTCAGT+TGG - Chr2:11219645-11219664 MsG0280007153.01.T01:intron 50.0%
CTATGGTAGCCGTTTGAGTG+AGG + Chr2:11217480-11217499 None:intergenic 50.0%
CTTCAGGCAGTAGGTGATTG+TGG - Chr2:11216131-11216150 MsG0280007153.01.T01:intron 50.0%
CTTCTTCTGGTGGCACCATA+GGG + Chr2:11215039-11215058 None:intergenic 50.0%
GCATAAACAACCTCCATGGG+AGG - Chr2:11218370-11218389 MsG0280007153.01.T01:intron 50.0%
GGGAGATTGAACGCTCATGT+TGG + Chr2:11217714-11217733 None:intergenic 50.0%
GGTCATGACAAGGCAAGACA+TGG + Chr2:11217735-11217754 None:intergenic 50.0%
GTCTTGCCTTGTCATGACCA+GGG - Chr2:11217736-11217755 MsG0280007153.01.T01:intron 50.0%
TAAAAACCAGCCTCCCATGG+AGG + Chr2:11218383-11218402 None:intergenic 50.0%
TCCTAAAAACCAGCCTCCCA+TGG + Chr2:11218386-11218405 None:intergenic 50.0%
TCGGTTGGAGAATCTGTTGG+TGG - Chr2:11215195-11215214 MsG0280007153.01.T01:CDS 50.0%
TCTTCTTCTGGTGGCACCAT+AGG + Chr2:11215040-11215059 None:intergenic 50.0%
TGAGGTGCGTTTGCAAGTTG+TGG - Chr2:11214885-11214904 MsG0280007153.01.T01:CDS 50.0%
TGCTCGGTTGGAGAATCTGT+TGG - Chr2:11215192-11215211 MsG0280007153.01.T01:CDS 50.0%
TGTCTTGCCTTGTCATGACC+AGG - Chr2:11217735-11217754 MsG0280007153.01.T01:intron 50.0%
TTCACAGAGCTCTCTAGCAG+TGG + Chr2:11218423-11218442 None:intergenic 50.0%
TTTCGATCAACAGCTCCTCC+GGG + Chr2:11220042-11220061 None:intergenic 50.0%
! AGATGGATTCGCGAGAAACG+TGG + Chr2:11218084-11218103 None:intergenic 50.0%
! CAACTCTGGAGAGTTGAGGA+TGG + Chr2:11217680-11217699 None:intergenic 50.0%
!! TCTGCATCTGGCATCGATGA+AGG + Chr2:11219075-11219094 None:intergenic 50.0%
!! TGTTTCTAGCTTTGAGGCCC+TGG + Chr2:11217756-11217775 None:intergenic 50.0%
!! TTTGGTCCCATTCTGAAGCG+TGG - Chr2:11215704-11215723 MsG0280007153.01.T01:intron 50.0%
!!! GGGAGGCTGGTTTTTAGGAA+AGG - Chr2:11218387-11218406 MsG0280007153.01.T01:intron 50.0%
!!! GGTGCTGGTTTTTGTCGTTG+GGG + Chr2:11217360-11217379 None:intergenic 50.0%
!!! GTGCTGGTTTTTGTCGTTGG+GGG + Chr2:11217359-11217378 None:intergenic 50.0%
!!! GTGGTGCTGGTTTTTGTCGT+TGG + Chr2:11217362-11217381 None:intergenic 50.0%
!!! TCCATGGGAGGCTGGTTTTT+AGG - Chr2:11218382-11218401 MsG0280007153.01.T01:intron 50.0%
AAACAACCTCCATGGGAGGC+TGG - Chr2:11218374-11218393 MsG0280007153.01.T01:intron 55.0%
AATTCAGGAGGAAGCGGAGG+AGG - Chr2:11215282-11215301 MsG0280007153.01.T01:CDS 55.0%
ACAGAGCTCTCTAGCAGTGG+AGG + Chr2:11218420-11218439 None:intergenic 55.0%
ACTGGGAGGCTCCCTAACTA+CGG - Chr2:11219973-11219992 MsG0280007153.01.T01:intron 55.0%
ATACGAAGGGCAGGGAACAC+TGG - Chr2:11214984-11215003 MsG0280007153.01.T01:CDS 55.0%
ATGTCTGGTCTACTGGCCCA+TGG - Chr2:11218542-11218561 MsG0280007153.01.T01:intron 55.0%
CAAGTCCAGGGTTCGAACTC+CGG - Chr2:11219696-11219715 MsG0280007153.01.T01:intron 55.0%
CAGGCAGTAGGTGATTGTGG+AGG - Chr2:11216134-11216153 MsG0280007153.01.T01:intron 55.0%
CATCTTTGATCCGCCCTTGG+AGG - Chr2:11218099-11218118 MsG0280007153.01.T01:intron 55.0%
CTCCAAGGGCGGATCAAAGA+TGG + Chr2:11218101-11218120 None:intergenic 55.0%
CTCCCTAACTACGGCGATGA+CGG - Chr2:11219982-11220001 MsG0280007153.01.T01:intron 55.0%
CTCTGGCCGACAGATTTAGC+AGG + Chr2:11217455-11217474 None:intergenic 55.0%
CTTCTGCTGAGAAAGGGACG+TGG - Chr2:11215146-11215165 MsG0280007153.01.T01:CDS 55.0%
GCTAATTCAGGAGGAAGCGG+AGG - Chr2:11215279-11215298 MsG0280007153.01.T01:CDS 55.0%
GGCAGTAGGTGATTGTGGAG+GGG - Chr2:11216136-11216155 MsG0280007153.01.T01:intron 55.0%
GTGGGTCGAGAAACCTCCAA+GGG + Chr2:11218115-11218134 None:intergenic 55.0%
TTGAGGCCCTGGTCATGACA+AGG + Chr2:11217745-11217764 None:intergenic 55.0%
! GCCAGAGCACCTCACTCAAA+CGG - Chr2:11217468-11217487 MsG0280007153.01.T01:intron 55.0%
! TTTTTGTCGTTGGGGGTGGC+AGG + Chr2:11217352-11217371 None:intergenic 55.0%
!! CTGGCATCGATGAAGGCAGT+GGG + Chr2:11219068-11219087 None:intergenic 55.0%
!! CTGGTTTTTGTCGTTGGGGG+TGG + Chr2:11217356-11217375 None:intergenic 55.0%
!! TAGGGGCATCAGGTGTGCTA+TGG + Chr2:11217497-11217516 None:intergenic 55.0%
!! TCTGGCATCGATGAAGGCAG+TGG + Chr2:11219069-11219088 None:intergenic 55.0%
!! TGGCATCGATGAAGGCAGTG+GGG + Chr2:11219067-11219086 None:intergenic 55.0%
!! TGTGGAGGGGCTGATTTGCA+GGG - Chr2:11216149-11216168 MsG0280007153.01.T01:intron 55.0%
!! TTGTGGAGGGGCTGATTTGC+AGG - Chr2:11216148-11216167 MsG0280007153.01.T01:intron 55.0%
CGCCGTCATCGCCGTAGTTA+GGG + Chr2:11219987-11220006 None:intergenic 60.0%
GGTCGAGAAACCTCCAAGGG+CGG + Chr2:11218112-11218131 None:intergenic 60.0%
GGTGGGTCGAGAAACCTCCA+AGG + Chr2:11218116-11218135 None:intergenic 60.0%
GTCACCGATCTCGGTAGTCC+CGG - Chr2:11220021-11220040 MsG0280007153.01.T01:intron 60.0%
TCCTCCGGGACTACCGAGAT+CGG + Chr2:11220028-11220047 None:intergenic 60.0%
TCCTCCGGTAGTACGGTGCT+CGG + Chr2:11214815-11214834 None:intergenic 60.0%
! CCTAACTACGGCGATGACGG+CGG - Chr2:11219985-11220004 MsG0280007153.01.T01:intron 60.0%
! GCCGTTTGAGTGAGGTGCTC+TGG + Chr2:11217472-11217491 None:intergenic 60.0%
! GTCACCGAGCACCGTACTAC+CGG - Chr2:11214808-11214827 MsG0280007153.01.T01:CDS 60.0%
!! GGCATCGATGAAGGCAGTGG+GGG + Chr2:11219066-11219085 None:intergenic 60.0%
AAGGTCCGGGGTTCGAACCC+CGG - Chr2:11219829-11219848 MsG0280007153.01.T01:intron 65.0%
ACCGATCTCGGTAGTCCCGG+AGG - Chr2:11220024-11220043 MsG0280007153.01.T01:intron 65.0%
AGCGGAGGAGGTAGCGCAGT+TGG - Chr2:11215294-11215313 MsG0280007153.01.T01:CDS 65.0%
CCGCCGTCATCGCCGTAGTT+AGG + Chr2:11219988-11220007 None:intergenic 65.0%
GACGGCGGAGTCACCGATCT+CGG - Chr2:11220012-11220031 MsG0280007153.01.T01:intron 65.0%
! ACCGAGCACCGTACTACCGG+AGG - Chr2:11214811-11214830 MsG0280007153.01.T01:CDS 65.0%
! GATGACGGCGGAAGAGACGG+CGG - Chr2:11219997-11220016 MsG0280007153.01.T01:intron 65.0%
! GGCGATGACGGCGGAAGAGA+CGG - Chr2:11219994-11220013 MsG0280007153.01.T01:intron 65.0%
GGTGGCCGGAGTTCGAACCC+TGG + Chr2:11219704-11219723 None:intergenic 70.0%
GGTGGCCGGGGTTCGAACCC+CGG + Chr2:11219837-11219856 None:intergenic 75.0%
! GGTGCTCGGTGACTCCGCCG+TGG + Chr2:11214801-11214820 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 11214788 11220666 11214788 ID=MsG0280007153.01;Name=MsG0280007153.01
Chr2 mRNA 11214788 11220666 11214788 ID=MsG0280007153.01.T01;Parent=MsG0280007153.01;Name=MsG0280007153.01.T01;_AED=0.48;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|417
Chr2 exon 11220116 11220666 11220116 ID=MsG0280007153.01.T01:exon:310;Parent=MsG0280007153.01.T01
Chr2 exon 11214788 11215490 11214788 ID=MsG0280007153.01.T01:exon:309;Parent=MsG0280007153.01.T01
Chr2 CDS 11220116 11220666 11220116 ID=MsG0280007153.01.T01:cds;Parent=MsG0280007153.01.T01
Chr2 CDS 11214788 11215490 11214788 ID=MsG0280007153.01.T01:cds;Parent=MsG0280007153.01.T01
Gene Sequence

>MsG0280007153.01.T01

ATGGCGGAAGCCACGGCGGAGTCACCGAGCACCGTACTACCGGAGGAGTTGATGATCGAAATCCTTTCTAGGGTTGATTTGAACAATCCTCTCCAATTGAGGTGCGTTTGCAAGTTGTGGAATTTGCTAATTCTTGATCCTCAATTCGTGAAGAACCATTCTCGCAGATATTTCACCGAATACATCTATGTTCTATATACGAAGGGCAGGGAACACTGGAATGCTTTCCGTTCACAGATTTCAAAGAACCCTATGGTGCCACCAGAAGAAGAAAACAACGACGATGATGAAGATGAAGAAGAAGAAGACGATGCTGCTGATGCTGACGAAGAAGATAAAAAAGATGAAGAAGAAGATACTTCTGCTGAGAAAGGGACGTGGAAACATTGGTTGATGAATTTAATTGCTCGGTTGGAGAATCTGTTGGTGGAAATTCGGTTACTCAAAAAGGACTTGAAAACTATCAAAGCTGATATACTAATAGAAGCTCAGCTAATTCAGGAGGAAGCGGAGGAGGTAGCGCAGTTGGATCATCTTTGGGTGTTTGTTAGAATCGAATCACTGGGAGGCTCCCTAACTACGGCGATGACGGCGGAAGAGACGGCGGAGTCACCGATCTCGGTAGTCCCGGAGGAGCTGTTGATCGAAATCCTTTATAGAATTGATAATACTCTGCAATTGAGGTGCGTTTGCAAGTTGTGGAAATCGCTCGTTGTTGATCATGAATTCGTTAGGAAGCTCTTATCGAGATTCACGGACATTCCCTTTCTATATGCAAAGGTCTGGGAACAGTACAATGCTTTCAAATTGCAGAATATTATGCCTCAAGAAGAAGAAGAAGAAGAAGATGATGATGATGAAGAAGGAGGAGGAGATGATGATGATGATGATGATGATGATGATGAAGCAGAAGTAGCAGATGAAGAAGAAGATGACGATGATGATGAAGATGGTGAAGAAGAAGATGATGATGAAGAAGAGGAAGAAGAGGAAGAAGAGGAGAAGGAGGAGAAACAATTGCCGATGAACGAGTTGGCTAAGCTTGATAATCTTGATGAAGAAGAAAAAGAGAGACAATTGATGATGATGGCAGTTGCTAAGGCAGATCAAATTTTGGTGGATGTTCGGTTTCTGAAAGGGAAATTGGAAACTATTAATGATTTATCTCAAATGCACATTCTGGAGGATAAAATGAAGTGTCTCAAAAGCTTTCTGCAGGTTTATCTCAAGTCAACAACATCTTCATCCTCTTAG

Protein sequence

>MsG0280007153.01.T01

MAEATAESPSTVLPEELMIEILSRVDLNNPLQLRCVCKLWNLLILDPQFVKNHSRRYFTEYIYVLYTKGREHWNAFRSQISKNPMVPPEEENNDDDEDEEEEDDAADADEEDKKDEEEDTSAEKGTWKHWLMNLIARLENLLVEIRLLKKDLKTIKADILIEAQLIQEEAEEVAQLDHLWVFVRIESLGGSLTTAMTAEETAESPISVVPEELLIEILYRIDNTLQLRCVCKLWKSLVVDHEFVRKLLSRFTDIPFLYAKVWEQYNAFKLQNIMPQEEEEEEDDDDEEGGGDDDDDDDDDDEAEVADEEEDDDDDEDGEEEDDDEEEEEEEEEEKEEKQLPMNELAKLDNLDEEEKERQLMMMAVAKADQILVDVRFLKGKLETINDLSQMHILEDKMKCLKSFLQVYLKSTTSSSS*